View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5413_low_18 (Length: 403)

Name: NF5413_low_18
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5413_low_18
NF5413_low_18
[»] chr3 (75 HSPs)
chr3 (4-189)||(47866871-47867041)
chr3 (9-187)||(37042366-37042541)
chr3 (228-396)||(47866636-47866802)
chr3 (4-189)||(26208009-26208191)
chr3 (4-187)||(35963147-35963327)
chr3 (8-187)||(14752157-14752333)
chr3 (4-187)||(50650986-50651166)
chr3 (4-187)||(54464845-54465024)
chr3 (4-187)||(28875401-28875581)
chr3 (19-187)||(30189581-30189746)
chr3 (4-187)||(47864186-47864366)
chr3 (9-187)||(11054260-11054432)
chr3 (8-180)||(26724947-26725116)
chr3 (4-187)||(47115844-47116024)
chr3 (4-186)||(6075076-6075255)
chr3 (5-187)||(8703105-8703280)
chr3 (5-187)||(9054992-9055167)
chr3 (4-187)||(2927284-2927465)
chr3 (4-184)||(36546537-36546714)
chr3 (4-184)||(36561601-36561778)
chr3 (4-187)||(7866432-7866612)
chr3 (4-180)||(37074953-37075128)
chr3 (4-187)||(46711607-46711786)
chr3 (4-158)||(6438078-6438229)
chr3 (9-187)||(23311543-23311717)
chr3 (4-187)||(579094-579267)
chr3 (4-187)||(29235188-29235362)
chr3 (4-178)||(32619787-32619959)
chr3 (10-189)||(20847217-20847391)
chr3 (60-186)||(31836971-31837093)
chr3 (9-111)||(3972275-3972378)
chr3 (9-111)||(3997500-3997603)
chr3 (4-183)||(19464070-19464248)
chr3 (4-187)||(53270228-53270409)
chr3 (19-99)||(6752681-6752761)
chr3 (19-111)||(38674881-38674973)
chr3 (4-187)||(50730104-50730284)
chr3 (4-187)||(50782570-50782750)
chr3 (64-187)||(23910462-23910581)
chr3 (73-187)||(9264616-9264726)
chr3 (123-187)||(8764628-8764692)
chr3 (4-187)||(41476284-41476458)
chr3 (123-187)||(8769528-8769592)
chr3 (19-187)||(8096967-8097131)
chr3 (4-88)||(46557245-46557330)
chr3 (19-111)||(34194893-34194985)
chr3 (19-99)||(34722638-34722718)
chr3 (19-187)||(10114916-10115080)
chr3 (19-187)||(22479003-22479167)
chr3 (123-184)||(33973518-33973580)
chr3 (4-77)||(33974614-33974688)
chr3 (19-111)||(10252016-10252108)
chr3 (4-47)||(23910580-23910624)
chr3 (4-55)||(48802557-48802609)
chr3 (220-283)||(47867178-47867241)
chr3 (339-396)||(47866565-47866625)
chr3 (19-99)||(7886650-7886730)
chr3 (19-111)||(10014274-10014366)
chr3 (19-99)||(30454758-30454837)
chr3 (4-66)||(9264003-9264066)
chr3 (54-184)||(36150964-36151092)
chr3 (330-393)||(47867206-47867269)
chr3 (155-189)||(6752799-6752833)
chr3 (157-187)||(32070337-32070367)
chr3 (19-187)||(38401385-38401553)
chr3 (19-48)||(34722570-34722599)
chr3 (150-187)||(41935863-41935900)
chr3 (9-139)||(41936195-41936313)
chr3 (136-181)||(49584074-49584119)
chr3 (130-187)||(54725570-54725627)
chr3 (19-99)||(21214246-21214326)
chr3 (19-111)||(22456029-22456121)
chr3 (130-186)||(25242128-25242184)
chr3 (19-111)||(46918234-46918326)
chr3 (151-187)||(47599583-47599619)
[»] chr8 (48 HSPs)
chr8 (4-187)||(34890165-34890345)
chr8 (4-187)||(7858517-7858697)
chr8 (4-187)||(36190761-36190941)
chr8 (4-187)||(43216338-43216518)
chr8 (19-187)||(26483537-26483701)
chr8 (4-187)||(29920259-29920439)
chr8 (9-187)||(7022394-7022569)
chr8 (4-185)||(8711865-8712039)
chr8 (4-189)||(16879382-16879563)
chr8 (9-187)||(8709777-8709950)
chr8 (4-183)||(24892827-24893006)
chr8 (22-187)||(30575825-30575987)
chr8 (4-187)||(15957900-15958084)
chr8 (7-164)||(28348603-28348756)
chr8 (4-158)||(31734104-31734255)
chr8 (4-187)||(34158281-34158462)
chr8 (4-187)||(15824628-15824802)
chr8 (4-187)||(35456011-35456195)
chr8 (9-187)||(4046884-4047060)
chr8 (64-187)||(13143936-13144056)
chr8 (9-111)||(2052830-2052931)
chr8 (8-99)||(8107693-8107784)
chr8 (4-99)||(7499715-7499812)
chr8 (4-187)||(41086377-41086557)
chr8 (4-104)||(13143753-13143854)
chr8 (118-187)||(2052963-2053032)
chr8 (19-104)||(3642040-3642124)
chr8 (19-187)||(17713228-17713392)
chr8 (134-189)||(45190700-45190755)
chr8 (30-172)||(35525603-35525739)
chr8 (19-187)||(44663783-44663944)
chr8 (132-185)||(11158675-11158728)
chr8 (45-187)||(16358103-16358240)
chr8 (23-87)||(7670749-7670813)
chr8 (19-99)||(8673386-8673466)
chr8 (19-111)||(25195109-25195201)
chr8 (128-184)||(40773397-40773453)
chr8 (4-54)||(13144081-13144132)
chr8 (19-111)||(2628227-2628319)
chr8 (128-187)||(8107608-8107668)
chr8 (19-111)||(26954455-26954547)
chr8 (4-99)||(41755915-41756010)
chr8 (124-187)||(7499821-7499884)
chr8 (19-187)||(17336747-17336911)
chr8 (9-189)||(33563496-33563681)
chr8 (130-189)||(34900037-34900096)
chr8 (19-183)||(41362302-41362462)
chr8 (130-182)||(6401732-6401784)
[»] chr4 (54 HSPs)
chr4 (9-187)||(47867873-47868048)
chr4 (4-185)||(20281580-20281758)
chr4 (4-187)||(29203495-29203675)
chr4 (4-189)||(17794522-17794704)
chr4 (9-187)||(2229241-2229416)
chr4 (4-187)||(5483261-5483441)
chr4 (4-187)||(35310725-35310905)
chr4 (8-187)||(4058708-4058884)
chr4 (4-187)||(14332749-14332929)
chr4 (4-187)||(20716169-20716349)
chr4 (4-187)||(26916314-26916494)
chr4 (30-187)||(7654633-7654786)
chr4 (4-187)||(39078146-39078325)
chr4 (4-187)||(41414594-41414773)
chr4 (4-187)||(10069686-10069866)
chr4 (4-187)||(28668984-28669163)
chr4 (4-187)||(56318053-56318233)
chr4 (4-187)||(1585332-1585510)
chr4 (19-189)||(50080437-50080598)
chr4 (9-187)||(8683289-8683462)
chr4 (19-187)||(24940370-24940534)
chr4 (9-183)||(42915523-42915695)
chr4 (4-184)||(55580658-55580836)
chr4 (30-179)||(16604837-16604982)
chr4 (9-187)||(48793613-48793784)
chr4 (19-189)||(12002614-12002782)
chr4 (4-189)||(14583718-14583900)
chr4 (4-99)||(25297289-25297385)
chr4 (4-97)||(52535654-52535748)
chr4 (19-189)||(32323243-32323408)
chr4 (19-111)||(50145741-50145833)
chr4 (20-189)||(32203226-32203384)
chr4 (60-173)||(32280000-32280109)
chr4 (4-99)||(35529661-35529757)
chr4 (19-147)||(5815474-5815598)
chr4 (128-187)||(16473858-16473917)
chr4 (70-189)||(21722663-21722778)
chr4 (19-189)||(19351851-19352023)
chr4 (4-158)||(31280188-31280329)
chr4 (19-187)||(5064638-5064802)
chr4 (137-187)||(52535580-52535630)
chr4 (152-189)||(32203413-32203450)
chr4 (130-178)||(7438760-7438808)
chr4 (19-111)||(23978170-23978262)
chr4 (23-178)||(17799126-17799277)
chr4 (19-111)||(46070577-46070667)
chr4 (19-99)||(8178306-8178386)
chr4 (19-99)||(40553774-40553854)
chr4 (19-187)||(37911889-37912053)
chr4 (4-49)||(21722783-21722829)
chr4 (128-178)||(31532445-31532495)
chr4 (4-49)||(32280104-32280150)
chr4 (130-184)||(38140698-38140752)
chr4 (19-111)||(5841834-5841926)
[»] chr5 (41 HSPs)
chr5 (4-187)||(20644005-20644185)
chr5 (4-187)||(37562751-37562932)
chr5 (9-187)||(43589952-43590127)
chr5 (9-187)||(6686380-6686556)
chr5 (4-187)||(42273640-42273818)
chr5 (4-183)||(34425322-34425497)
chr5 (4-170)||(37522596-37522760)
chr5 (4-187)||(11261874-11262054)
chr5 (4-177)||(38130113-38130286)
chr5 (9-187)||(25840860-25841035)
chr5 (4-184)||(20039093-20039270)
chr5 (9-187)||(17351384-17351559)
chr5 (10-178)||(19413138-19413303)
chr5 (4-111)||(38280838-38280946)
chr5 (9-187)||(39505222-39505397)
chr5 (4-182)||(43454318-43454493)
chr5 (19-165)||(42104262-42104402)
chr5 (19-187)||(4463367-4463529)
chr5 (128-187)||(12792776-12792835)
chr5 (4-158)||(32110993-32111144)
chr5 (4-111)||(32017695-32017802)
chr5 (9-107)||(7071234-7071333)
chr5 (4-159)||(5984126-5984285)
chr5 (4-162)||(8225454-8225608)
chr5 (6-170)||(41625519-41625678)
chr5 (4-187)||(9957425-9957586)
chr5 (128-187)||(12729875-12729933)
chr5 (46-187)||(23233445-23233582)
chr5 (120-175)||(32019925-32019980)
chr5 (4-93)||(11858311-11858401)
chr5 (73-184)||(30893243-30893350)
chr5 (19-180)||(12912292-12912448)
chr5 (4-50)||(12730103-12730150)
chr5 (19-111)||(10153990-10154082)
chr5 (19-187)||(16153335-16153499)
chr5 (4-45)||(12792929-12792971)
chr5 (130-182)||(32079618-32079670)
chr5 (4-50)||(104345-104392)
chr5 (130-181)||(29493508-29493559)
chr5 (19-111)||(3463877-3463969)
chr5 (19-111)||(5369093-5369185)
[»] chr2 (38 HSPs)
chr2 (4-187)||(7645216-7645399)
chr2 (4-189)||(9864705-9864886)
chr2 (4-187)||(41528247-41528428)
chr2 (4-187)||(3201317-3201497)
chr2 (4-187)||(28599137-28599317)
chr2 (4-187)||(6110188-6110370)
chr2 (4-186)||(12938233-12938412)
chr2 (9-187)||(35517119-35517294)
chr2 (4-187)||(19264090-19264271)
chr2 (4-187)||(25572037-25572216)
chr2 (4-183)||(33198624-33198800)
chr2 (4-187)||(45085248-45085428)
chr2 (4-187)||(45660356-45660539)
chr2 (7-189)||(24204516-24204695)
chr2 (4-189)||(6765920-6766103)
chr2 (9-189)||(44454987-44455162)
chr2 (19-187)||(8701609-8701773)
chr2 (9-187)||(29524030-29524205)
chr2 (21-178)||(5963210-5963362)
chr2 (4-189)||(33677474-33677656)
chr2 (33-189)||(35115790-35115943)
chr2 (18-189)||(35022903-35023071)
chr2 (19-187)||(11617031-11617195)
chr2 (4-187)||(28858300-28858483)
chr2 (4-158)||(14873953-14874105)
chr2 (4-138)||(40584436-40584567)
chr2 (4-187)||(30830585-30830765)
chr2 (4-94)||(39696877-39696968)
chr2 (60-189)||(32428021-32428147)
chr2 (118-187)||(40808709-40808778)
chr2 (19-187)||(26998324-26998488)
chr2 (79-187)||(43415468-43415572)
chr2 (19-184)||(32010109-32010270)
chr2 (150-189)||(11825346-11825385)
chr2 (135-173)||(5280533-5280571)
chr2 (37-87)||(5280592-5280642)
chr2 (19-104)||(38071003-38071087)
chr2 (19-111)||(32273678-32273770)
[»] chr7 (40 HSPs)
chr7 (4-187)||(6191036-6191216)
chr7 (9-187)||(14805866-14806040)
chr7 (9-187)||(15252860-15253034)
chr7 (9-187)||(45485951-45486126)
chr7 (9-187)||(46760246-46760421)
chr7 (4-187)||(18102521-18102701)
chr7 (9-187)||(19912758-19912933)
chr7 (9-187)||(25737616-25737791)
chr7 (4-187)||(4910624-4910802)
chr7 (9-187)||(35923248-35923422)
chr7 (4-187)||(25944567-25944747)
chr7 (9-187)||(47779600-47779775)
chr7 (4-165)||(20123691-20123849)
chr7 (4-187)||(22632080-22632260)
chr7 (4-189)||(14574555-14574737)
chr7 (4-189)||(44682869-44683050)
chr7 (4-173)||(11780009-11780174)
chr7 (4-189)||(15995710-15995893)
chr7 (4-110)||(47557663-47557770)
chr7 (18-187)||(16917478-16917642)
chr7 (4-99)||(2610641-2610737)
chr7 (72-187)||(12632333-12632444)
chr7 (10-99)||(27810808-27810898)
chr7 (19-184)||(33153041-33153202)
chr7 (19-171)||(48413728-48413868)
chr7 (81-184)||(37767011-37767110)
chr7 (4-49)||(12633110-12633156)
chr7 (1-46)||(35068961-35069007)
chr7 (19-99)||(4237788-4237868)
chr7 (4-111)||(9158081-9158188)
chr7 (135-187)||(27810735-27810787)
chr7 (19-178)||(19492391-19492548)
chr7 (19-187)||(35887958-35888122)
chr7 (19-187)||(38260323-38260487)
chr7 (19-99)||(39170541-39170621)
chr7 (159-189)||(11780188-11780218)
chr7 (142-187)||(31549745-31549790)
chr7 (19-111)||(24151643-24151734)
chr7 (19-99)||(30082355-30082435)
chr7 (130-182)||(40560491-40560543)
[»] chr1 (67 HSPs)
chr1 (4-187)||(2126029-2126209)
chr1 (4-184)||(28120748-28120925)
chr1 (4-187)||(15959630-15959810)
chr1 (4-187)||(32623995-32624175)
chr1 (4-183)||(6785447-6785622)
chr1 (4-187)||(6786829-6787009)
chr1 (4-187)||(39555576-39555756)
chr1 (9-187)||(24190466-24190640)
chr1 (4-187)||(33369544-33369721)
chr1 (19-187)||(24728616-24728781)
chr1 (4-187)||(42965806-42965984)
chr1 (9-187)||(3076291-3076466)
chr1 (4-165)||(37735395-37735553)
chr1 (4-187)||(13136544-13136720)
chr1 (4-187)||(32983162-32983340)
chr1 (4-187)||(39932562-39932742)
chr1 (4-187)||(45226129-45226309)
chr1 (1-187)||(40718666-40718849)
chr1 (4-183)||(47600030-47600209)
chr1 (4-165)||(2246026-2246184)
chr1 (4-176)||(12448969-12449137)
chr1 (4-187)||(3875009-3875191)
chr1 (46-189)||(52984967-52985106)
chr1 (10-187)||(10558756-10558920)
chr1 (4-187)||(28016736-28016914)
chr1 (4-187)||(46542975-46543153)
chr1 (9-187)||(35691388-35691563)
chr1 (4-181)||(7467958-7468133)
chr1 (64-187)||(11241079-11241198)
chr1 (9-187)||(44148826-44148997)
chr1 (4-187)||(43667293-43667471)
chr1 (4-186)||(33431552-33431729)
chr1 (30-189)||(298656-298812)
chr1 (3-179)||(1820405-1820578)
chr1 (4-183)||(47014487-47014660)
chr1 (4-159)||(25391675-25391824)
chr1 (4-88)||(23392251-23392335)
chr1 (33-187)||(32742192-32742342)
chr1 (24-187)||(7875930-7876091)
chr1 (4-189)||(1034849-1035028)
chr1 (19-170)||(3861702-3861847)
chr1 (19-111)||(16854147-16854239)
chr1 (60-189)||(30221773-30221898)
chr1 (19-159)||(43765301-43765438)
chr1 (19-187)||(7397713-7397877)
chr1 (8-182)||(46818497-46818668)
chr1 (128-183)||(4672943-4672998)
chr1 (19-111)||(5858433-5858525)
chr1 (128-187)||(50012690-50012750)
chr1 (4-189)||(47302896-47303076)
chr1 (130-184)||(7190770-7190824)
chr1 (23-111)||(6787052-6787139)
chr1 (60-189)||(32318548-32318673)
chr1 (19-187)||(45840056-45840219)
chr1 (19-97)||(34102049-34102126)
chr1 (4-48)||(50012582-50012627)
chr1 (134-187)||(50370068-50370121)
chr1 (34-187)||(30701375-30701524)
chr1 (4-40)||(48566156-48566192)
chr1 (31-111)||(50369981-50370060)
chr1 (4-46)||(11241034-11241077)
chr1 (19-187)||(16688143-16688307)
chr1 (19-111)||(5950446-5950538)
chr1 (19-111)||(15912205-15912297)
chr1 (19-111)||(37538816-37538908)
chr1 (19-111)||(44510281-44510373)
chr1 (4-55)||(50665254-50665306)
[»] chr6 (19 HSPs)
chr6 (9-187)||(11082235-11082410)
chr6 (9-187)||(21542414-21542589)
chr6 (19-187)||(35129044-35129209)
chr6 (4-187)||(7274865-7275045)
chr6 (4-189)||(17751732-17751914)
chr6 (9-187)||(3095710-3095884)
chr6 (9-187)||(34177631-34177806)
chr6 (8-189)||(30794180-30794358)
chr6 (4-189)||(12461417-12461599)
chr6 (123-187)||(9428852-9428916)
chr6 (19-187)||(4031992-4032159)
chr6 (4-99)||(31107182-31107277)
chr6 (4-86)||(9428761-9428844)
chr6 (19-189)||(14573116-14573282)
chr6 (130-187)||(5300601-5300658)
chr6 (22-111)||(16013494-16013583)
chr6 (19-111)||(4987948-4988040)
chr6 (19-111)||(16524385-16524476)
chr6 (157-185)||(16870784-16870812)
[»] scaffold0442 (1 HSPs)
scaffold0442 (4-187)||(10036-10216)
[»] scaffold0300 (1 HSPs)
scaffold0300 (9-185)||(565-738)
[»] scaffold0045 (1 HSPs)
scaffold0045 (4-187)||(77948-78128)
[»] scaffold0062 (1 HSPs)
scaffold0062 (4-187)||(44761-44941)
[»] scaffold0774 (1 HSPs)
scaffold0774 (5-158)||(3447-3597)
[»] scaffold0009 (2 HSPs)
scaffold0009 (9-187)||(157790-157965)
scaffold0009 (19-107)||(52668-52756)
[»] scaffold0132 (2 HSPs)
scaffold0132 (4-187)||(1003-1183)
scaffold0132 (4-187)||(8963-9143)
[»] scaffold0018 (1 HSPs)
scaffold0018 (8-178)||(154856-155022)
[»] scaffold0005 (1 HSPs)
scaffold0005 (4-189)||(233475-233657)
[»] scaffold0111 (1 HSPs)
scaffold0111 (8-159)||(40174-40321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (19-107)||(160257-160345)
[»] scaffold0565 (1 HSPs)
scaffold0565 (19-187)||(5865-6029)
[»] scaffold1786 (2 HSPs)
scaffold1786 (4-49)||(855-900)
scaffold1786 (137-175)||(959-997)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 47867041 - 47866871
Alignment:
Q  4 tttgtttattctcataaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattc 103  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47867041 tttgcttattctcataaattaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacatattc 47866942  T
Q  104 ccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    |||| ||||| |||||||               | ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47866941 ccatgaaaatggtgtatt---------------ataactatactccaaattcttatgttttagtctttttaataagtgtgatttga 47866871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 37042541 - 37042366
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||| |||||||||| |||| ||    
T  37042541 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 37042442  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||  ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37042441 aaaact----ttttccaacgaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgattt 37042366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 228 - 396
Target Start/End: Complemental strand, 47866802 - 47866636
Alignment:
Q  228 tgaatccatctgtgttattaattcattttcaccaaaactcatcaaaatcatctcaagnnnnnnnnnnnnnnnacacatttgcagaatgaattcattttca 327  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||               ||||||||||| ||| ||||||||||||    
T  47866802 tgaatccatctgtgttattaattcattttcaccgaaagtcatcaaaatcatctccagttttttttttttt--acacatttgcataattaattcattttca 47866705  T
Q  328 ctaaactcatcaaaatcatctcaagattgtgtttttgttttaccgatttgcatcattaattcatttcac 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47866704 ctaaactcatcaaaatcatctcaagattgtgtttttgttttaccgatttgcatcattaattcatttcac 47866636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 26208009 - 26208191
Alignment:
Q  4 tttgtttattctcataaatt-aaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||| ||| |||||||||||||||| |||||||||| ||    
T  26208009 tttgcttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatctt 26208108  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
     |||| ||| |    ||||| | | ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  26208109 accatgaaact----tattccagacaaaacacaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgatttga 26208191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 35963147 - 35963327
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||| |||| || ||||||||||| ||||| ||||| ||||| |||||| ||| ||    
T  35963147 tttgtttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatctt 35963246  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35963247 cctataaaact----ttttccaaacaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 35963327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 14752333 - 14752157
Alignment:
Q  8 tttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||||| |||||||||| |||||||||| |||| |    
T  14752333 tttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttccta 14752234  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||    | | | ||| ||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  14752233 taa----atttttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttctaaataagtgtgattt 14752157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 50651166 - 50650986
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  | ||||||||||| |||||| |||||||||| |||||||||| ||    
T  50651166 tttgattattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatctt 50651067  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  50651066 cctataaaact----ttttgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttttcttaataagtgtgattt 50650986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 54465024 - 54464845
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||| ||||||| |||||||||| |||||| |||||||||| ||    
T  54465024 tttgtttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatctt 54464925  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||     | | | || |||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||||||    
T  54464924 cctata-----atttttttttaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtgattt 54464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 28875401 - 28875581
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||||| |||||||||| ||    
T  28875401 tttgtttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 28875500  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||| |    | ||| ||| |||||||||| ||||||| |||||||||||||| ||||||||| ||||||| ||||||||    
T  28875501 cttataaaact----ttttccaaagaaaacacaaataactatagtccaaattcttatgctttagttttcttaataaatgtgattt 28875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 30189581 - 30189746
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttct-ccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtg 117  Q
    |||||||||| |||||||||||||| |||||| |||| || ||| | |||||| ||||||||||||||||| |||||||||| |||| |||||| |        
T  30189581 aaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact---- 30189676  T
Q  118 tattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    | ||  ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30189677 tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttaatttttttaataagtgtgattt 30189746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 47864186 - 47864366
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| |||| || ||| | |||||||||||| |||||||||| |||||||||| ||    
T  47864186 tttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatctt 47864285  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||  ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  47864286 cctataaaact----tttttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttttcttaataaatgtgattt 47864366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 11054432 - 11054260
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || |    ||| ||||||| ||||||||||||||||| ||||||| || |||| ||    
T  11054432 ttattctcataaaattaaatgcaaattacattcaattttctctttcat----tttttccataaccaatagccaatgaaaattgtttttaaatcttcctat 11054337  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |  |   ||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  11054336 aaaactttt---ttccaaagaaaacacaaaaaactatactccaaattcttatattttagttttcttaataagtatgattt 11054260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 26725116 - 26724947
Alignment:
Q  8 tttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    ||||||||||| |||||| |||||||||||||||| |||| ||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| ||| ||    
T  26725116 tttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctca 26725017  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagt 180  Q
     |||| |    ||||| ||| ||||||||||||| |||||| ||||||||||| |||||||||| |||||||||    
T  26725016 gaaaact----tattccaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttaataagt 26724947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 47115844 - 47116024
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| |||||||||  ||||| |||| |||||||||| | ||||| ||| ||||||||||||| |||| |||||| | |||||||| ||    
T  47115844 tttgcttattctcatgaaattaaatataaatttcatttaattttctcttttttccattttatccataatcaataaccaaagaaaattgcttttacatctt 47115943  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     |||||||| |    |||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  47115944 tccataaaatt----tattctaaaacaaacacaaaaaattatactctaaattcttatgttttagtttttttaataaatgtgattt 47116024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 6075076 - 6075255
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| | ||||| |||| |||||||||||| |||||||| | ||    
T  6075076 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttctt 6075175  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatt 186  Q
    ||  ||| | |    | ||| ||| ||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||    
T  6075176 cctgtaacact----ttttccaaagaaaacacaaaaaattatactccaaattcttatactttagttttcttaataagtgtgatt 6075255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 8703105 - 8703280
Alignment:
Q  5 ttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattc 103  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| | |||| || ||| ||||||||||||||||||||||| || ||||||||| |||    
T  8703105 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttt-tccataatcaatagccaatgaaattg-tttttacatcttc 8703202  T
Q  104 ccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    | |||||  |    | ||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8703203 ctataaattt----ttttccaaa-aacacacaaaa-actatactccaaattcttatgttttagtttttttaataagtgtgattt 8703280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 9054992 - 9055167
Alignment:
Q  5 ttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattc 103  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| | |||| || ||| ||||||||||||||||||||||| || ||||||||| |||    
T  9054992 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttt-tccataatcaatagccaatgaaattg-tttttacatcttc 9055089  T
Q  104 ccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    | |||||  |    | ||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9055090 ctataaattt----ttttccaaa-aacacacaaaa-actatactccaaattcttatgttttagtttttttaataagtgtgattt 9055167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 2927284 - 2927465
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| ||||||||| ||||||||||| |||||||||| ||||| | ||| | ||||| |||||||||||||||||  ||||||||| ||    
T  2927284 tttgcttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatctt 2927383  T
Q  103 cccataaaaatagtgtattctaaataaaacac-aaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||||||| |    ||||| ||| |||| || |||||||||| || |||||||||||||||||||||| ||||||| ||||||||    
T  2927384 cccataaaact----tattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttttcttaataaatgtgattt 2927465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 36546537 - 36546714
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||||| |||| || ||| || |||| ||||||||||||||||| | |||||||| ||    
T  36546537 tttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatctt 36546636  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    || || ||| |    | ||| ||| |||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  36546637 cctatgaaact----ttttccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtgtga 36546714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 36561778 - 36561601
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||||| |||| || ||| || |||| ||||||||||||||||| | |||||||| ||    
T  36561778 tttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatctt 36561679  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    || || ||| |    | ||| ||| |||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  36561678 cctatgaaact----ttttccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtgtga 36561601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 7866612 - 7866432
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| | ||||  | ||| ||||||| |||||| |||||||||| |||||||||| ||    
T  7866612 tttgtttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatctt 7866513  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||| |    | ||  ||| |||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  7866512 cttataaaact----tttttcaaagaaaataaaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgattt 7866432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 37074953 - 37075128
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttc--cactttctccataatcaatagccaatgaaaatggtttttacata 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||  ||||   || ||| || |||| ||||||||||||||||| || |||||||     
T  37074953 tttgtttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatc 37075052  T
Q  101 ttcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagt 180  Q
    |||| |||||| |    | ||| ||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  37075053 ttcctataaaact----ttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttttttaataagt 37075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 46711786 - 46711607
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||| ||||||| |||||| |||||||||||||| ||||||| |||| || ||| || |||| |||||||||||||| || |||||||||| ||    
T  46711786 tttgtttattttcataaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatctt 46711688  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  46711687 cctataaaact----tttttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttttcttaataagtgtgattt 46711607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 6438078 - 6438229
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||| |||| || ||||||||||| ||||||||||||||||| |||||||||| ||    
T  6438078 tttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 6438177  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattctta 158  Q
    || ||||    ||  | ||  ||| |||||||||||||||||||||||||||||||    
T  6438178 cctataa----agcttttttcaaagaaaacacaaaaaactatactccaaattctta 6438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 23311717 - 23311543
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||| | ||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |||| ||    
T  23311717 ttattctcataaaattaaatgtatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 23311618  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||  ||| |||||||| |||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  23311617 aaaact----tttttcaaagaaaacacacaaaactatactctaaatttttatgttttagttttcttaataa-tgtgattt 23311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 579267 - 579094
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| ||||||| || ||    
T  579267 tttgtttaatctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatctt 579168  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| |||||||||||||       ||||||||||||||||||||||| ||||||||||||||||    
T  579167 cctataaaact----tttttcaaagaaaacacaaaaaa-------ccaaattcttatgttttagttttcttaataagtgtgattt 579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 29235188 - 29235362
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||| |||| |||||||||| ||||||||||||||| ||| |      || ||| ||||||| |||||||||||||||||  ||||||||| ||    
T  29235188 tttgtttattatcattaaattaaatgtaaattacattcaattctcttt------cattttttccataaccaatagccaatgaaaattatttttacatctt 29235281  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || || |||     || ||||||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  29235282 cctattaaac----gttttctaaagaaaatacaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgattt 29235362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 32619959 - 32619787
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| | | ||| ||||||||||| |||||||||||||||||  ||||||||| ||    
T  32619959 tttgtttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatctt 32619860  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgtt-ttagtttttttaataa 178  Q
    |  ||||||      ||||| ||| ||||||||||| | ||||||||||||||| |||||  ||||||| |||||||    
T  32619859 cttataaaa----cctattccaaagaaaacacaaaatattatactccaaattctcatgttcatagttttcttaataa 32619787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 20847391 - 20847217
Alignment:
Q  10 tattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccata 108  Q
    |||||||||||| |||||||||||||||||||||||||  || |||| || ||||||||||||||||  ||||||||||| ||||  |||| |||| ||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  109 aaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||| |    ||||| ||| ||||||| ||||| ||||||||||||||||||||||||  |||||||| || ||||||||||    
T  20847291 aaact----tattccaaagaaaacac-aaaaattatactccaaattcttatgtttta-attttttaacaattgtgatttga 20847217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 31836971 - 31837093
Alignment:
Q  60 tttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttat 159  Q
    |||||||| || |||||| |||||||||| |||||| |||||||| |||||| |    | ||| ||| |||| ||||||||||||||||||| |||||||    
T  31836971 tttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaact----ttttccaaagaaaatacaaaaaactatactccaacttcttat 31837066  T
Q  160 gttttagtttttttaataagtgtgatt 186  Q
    ||||||||||| |||||||||||||||    
T  31837067 gttttagttttcttaataagtgtgatt 31837093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 3972275 - 3972378
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| |||||||||||||||||||||||||||  ||| ||||||| ||||| | ||| ||||||| ||||||||| |||||||||| |||||||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3972374  T
Q  108 aaaa 111  Q
    ||||    
T  3972375 aaaa 3972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 3997603 - 3997500
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| |||||||||||||||||||||||||||  ||| ||||||| ||||| | ||| ||||||| ||||||||| |||||||||| |||||||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3997504  T
Q  108 aaaa 111  Q
    ||||    
T  3997503 aaaa 3997500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 19464070 - 19464248
Alignment:
Q  4 tttgtttattctcataaatt-aaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| | ||||||||||||||||||| ||| ||| |||| || |||  |||||| |||||   ||||||||| ||||||  || ||    
T  19464070 tttgtttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatctt 19464169  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactata--ctccaaattcttatgttttagtttttttaataagtgtg 183  Q
    || |||||| |    | ||  ||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  19464170 cctataaaact----tttttcaaagaaaacacaaaaaactatatactccaaattcttatgttttagttttgttaataagtgtg 19464248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 53270228 - 53270409
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttc--tctatcttccactttctccataatcaatagccaatgaaaatggtttttacata 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||  ||| |||| || ||| ||||||| |||||| ||||||||||  ||||| |||     
T  53270228 tttgtttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatc 53270327  T
Q  101 ttcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || | || ||| |    | ||  ||| ||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||    
T  53270328 tttctatgaaact----tttttcaaagaaaacacaaaaaactatactccaaattcttatg-tttaattttcttaatgagtgtgattt 53270409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 6752681 - 6752761
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    ||||||||||||||||||||||| ||| |||| ||||||| ||||||||||| ||||||||||| ||||| ||||||||||    
T  6752681 aaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacat 6752761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 38674881 - 38674973
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||||||| ||||||| |||||||||||||| |||| || ||||| |||||||||||| |||||||||| |||||||| ||||| |||||||    
T  38674881 aaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttacttattctcataaaa 38674973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 50730104 - 50730284
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||| | ||  | ||| ||||||| |||||| ||||||   |  ||||||||| ||    
T  50730104 tttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatgattttt-tttttacatctt 50730202  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaa-aactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  50730203 cctataaaact----ttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgattt 50730284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 50782750 - 50782570
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||| | ||  | ||| ||||||| |||||| ||||||   |  ||||||||| ||    
T  50782750 tttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatgattttt-tttttacatctt 50782652  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaa-ctatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  50782651 cctataaaact----ttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgattt 50782570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 23910581 - 23910462
Alignment:
Q  64 tccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttt 163  Q
    ||||||| |||||||||||||||||  ||||||||| |||| |||||| |    | ||  ||| |||||||||||| |||||||| ||||||||||||||    
T  23910581 tccataaccaatagccaatgaaaattatttttacatcttcctataaaact----ttttacaaagaaaacacaaaaagctatactctaaattcttatgttt 23910486  T
Q  164 tagtttttttaataagtgtgattt 187  Q
    || |||| ||||||||||||||||    
T  23910485 taattttcttaataagtgtgattt 23910462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 9264616 - 9264726
Alignment:
Q  73 aatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttt 172  Q
    |||||||||||||||| |||||||||| |||  |||||| |    | ||  ||| ||||||||||||||||||||| |||||| |||||||||||||| |    
T  9264616 aatagccaatgaaaattgtttttacatcttcatataaaact----tttttcaaagaaaacacaaaaaactatactcaaaattcatatgttttagttttct 9264711  T
Q  173 taataagtgtgattt 187  Q
    |||||||||||||||    
T  9264712 taataagtgtgattt 9264726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 8764692 - 8764628
Alignment:
Q  123 taaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  8764692 taaaaaaaacacaaaaagctatactcctaattgttatgttttagtttttttaataagtgtgattt 8764628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 41476458 - 41476284
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| |  ||| || ||| ||| ||       ||||||||||||  ||||||||| ||    
T  41476458 tttgtttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttcccta-------gccaatgaaaattatttttacatctt 41476366  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatg-ttttagtttttttaataagtgtgattt 187  Q
     | |||||| |    | ||  ||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||    
T  41476365 tctataaaact----tttttcaaagaaaacacaaaaaactatactccaaatttttatgtttttagttttcttaataagtgtgattt 41476284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 8769592 - 8769528
Alignment:
Q  123 taaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| ||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  8769592 taaaaaaaacaccaaaaactatactcctaattgttatgttttagttttcttaataagtgtgattt 8769528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 8097131 - 8096967
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| |||| || |||||| |||| ||||| |||||||||||  ||||||||| |||| |||||| |    |    
T  8097131 aaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaact----t 8097036  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||  | ||||||| |||||||  | |||| |  |||||||||||||| ||||||||||||||||    
T  8097035 atttcaaggataacacaagaaactatgttgcaaactactatgttttagttttcttaataagtgtgattt 8096967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 46557330 - 46557245
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaat 88  Q
    |||| |||||||||| |||||||||| |||||||||| |||||||||| |||| || ||| |||||||  ||||||||||||||||    
T  46557330 tttgcttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaat 46557245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 34194893 - 34194985
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||| ||| |||| |||| || |||||| |||| ||||| ||||||||||| |||||||||| |||| ||||||    
T  34194893 aaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaa 34194985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 34722718 - 34722638
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||| |||||||||||||||||||||   || || ||| | ||||| ||||||||||||||||| ||||||||||    
T  34722718 aaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacat 34722638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 10114916 - 10115080
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||| ||||| | |||||||||| |||||| || || |||||| ||||||||   ||||||||||| |||||||||| |||| |||||| |    |    
T  10114916 aaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaact----t 10115011  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | || |||||||| |||  | |||| |  |||||||||||||| ||||||||||||||||    
T  10115012 atttcaaagataatacaaaaaattatgttacaaactactatgttttagttttcttaataagtgtgattt 10115080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 22479167 - 22479003
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||  |||||||||| |||| |||||| |    |    
T  22479167 aaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaact----t 22479072  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | |||||||||||||||  | |||| |  |||||||||||||| |||||||||| |||||    
T  22479071 atttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagtgcgattt 22479003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 33973580 - 33973518
Alignment:
Q  123 taaataaaacacaaaaaa-ctatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    |||| ||||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||    
T  33973580 taaagaaaacacaaaaaaactatactccaaatttttatattttagttttgttaataagtgtga 33973518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 33974688 - 33974614
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatag 77  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| | |||| || ||| ||||||| ||||||    
T  33974688 tttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 10252016 - 10252108
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||| ||||| | |||||||||| |||||| || || |||||| ||||||||   ||||||||||| |||||||||| |||| ||||||    
T  10252016 aaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaa 10252108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 23910624 - 23910580
Alignment:
Q  4 tttgtttattctcata-aattaaatgcaaattacattcaattttc 47  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  23910624 tttgtttattctcatataattaaatgcaaattacattcaattttc 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 48802609 - 48802557
Alignment:
Q  4 tttgtttattctcataaat-taaatgcaaattacattcaattttctctatctt 55  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  48802609 tttgtttattctcataaaagtaaatgcaaattacattcaattttctctctctt 48802557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 47867241 - 47867178
Alignment:
Q  220 gtatttcttgaatccatctgtgttattaattcattttcaccaaaactcatcaaaatcatctcaa 283  Q
    ||||||||| ||||||| ||| ||||||||||||||| |   ||||||||||||||||||||||    
T  47867241 gtatttctttaatccatttgtattattaattcatttttatggaaactcatcaaaatcatctcaa 47867178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 47866625 - 47866565
Alignment:
Q  339 aaaatcatctcaagattgtgtttttgtttt---accgatttgcatcattaattcatttcac 396  Q
    |||||||||| |||||||||||||| ||||   |||||||||||| |||||||||||||||    
T  47866625 aaaatcatcttaagattgtgtttttttttttttaccgatttgcattattaattcatttcac 47866565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 7886730 - 7886650
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||| ||||||||| | |||||||||| |||| |||| || |||||| ||||  |||| ||||||||||| ||||||||||    
T  7886730 aaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacat 7886650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 10014274 - 10014366
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||| ||||| | |||||||||| |||||| ||  | |||||| ||||||||   ||||||||||| |||||||||| |||| ||||||    
T  10014274 aaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaa 10014366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 30454837 - 30454758
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||| | |||||||||| |||| |||| || |||||| |||| ||||| ||||| ||||| ||||||||||    
T  30454837 aaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacat 30454758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 9264003 - 9264066
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctcc 66  Q
    |||||||||||||||||| |||||||||||||||||  |||||| ||| |||| || |||||||    
T  9264003 tttgtttattctcataaaattaaatgcaaattacatctaattttatctctctttcattttctcc 9264066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 36150964 - 36151092
Alignment:
Q  54 ttccactttctccataatcaatagccaatgaaaatggt-ttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaa 152  Q
    ||||| ||||||||||||||||| ||||| |||||  | |||||||| ||||||||||| |    ||||||||  ||||  |||||||||| |||| |||    
T  36150964 ttccattttctccataatcaataaccaataaaaattatgttttacatcttcccataaaact----tattctaagaaaaaagcaaaaaactacactcgaaa 36151059  T
Q  153 ttcttatgttttagttttt-ttaataagtgtga 184  Q
    ||  || ||||||||||||  ||||||||||||    
T  36151060 ttactaggttttagtttttcctaataagtgtga 36151092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 47867269 - 47867206
Alignment:
Q  330 aaactcatcaaaatcatctcaagattgtgtttttgttttaccgatttgcatcattaattcattt 393  Q
    |||||||||||||||||||||||||| ||| ||| ||| | | ||||| || ||||||||||||    
T  47867269 aaactcatcaaaatcatctcaagattatgtatttctttaatccatttgtattattaattcattt 47867206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 6752799 - 6752833
Alignment:
Q  155 cttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||| |||||||||||||||||||||||||||||    
T  6752799 cttatcttttagtttttttaataagtgtgatttga 6752833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 187
Target Start/End: Original strand, 32070337 - 32070367
Alignment:
Q  157 tatgttttagtttttttaataagtgtgattt 187  Q
    |||||||||||||||||||||||||||||||    
T  32070337 tatgttttagtttttttaataagtgtgattt 32070367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 38401385 - 38401553
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| |||||| |||||||||| | || || |||||| ||||| ||   |||||||||||  ||||||||| | || |||||| |    |    
T  38401385 aaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaact----t 38401480  T
Q  119 attctaaataaaacacaaaaaactata----ctccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | ||||||||||||||||     | |||| |  |||||||||||||| ||||||||||||||||    
T  38401481 atttcaaagataacacaaaaaactatatatgttacaaactactatgttttagttttcttaataagtgtgattt 38401553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 34722570 - 34722599
Alignment:
Q  19 aaattaaatgcaaattacattcaattttct 48  Q
    ||||||||||||||||||||||||||||||    
T  34722570 aaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 41935900 - 41935863
Alignment:
Q  150 aaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  41935900 aaattcttttgttttagttttgttaataagtgtgattt 41935863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 41936313 - 41936195
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  ||| ||| |||||||||||       ||||| ||||| | |||||||| |||||||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaattaaaattgattttacatcttcccat 41936223  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaa 139  Q
     ||| |    ||||||||||||||||||||||    
T  41936222 gaaact----tattctaaataaaacacaaaaa 41936195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 49584074 - 49584119
Alignment:
Q  136 aaaaactatactccaaattcttatgttttagtttttttaataagtg 181  Q
    |||||||||| | |||| | ||||||||||||||||||||||||||    
T  49584074 aaaaactatattacaaactattatgttttagtttttttaataagtg 49584119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 54725627 - 54725570
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||||| |||| ||| | |||| || |||||||||||||| ||||||||||||||||    
T  54725627 aacacaagaaacaatattacaaactcctatgttttagttttcttaataagtgtgattt 54725570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21214246 - 21214326
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||| | |||||||||| |||| | ||  | |||||| ||||||||   ||||||||||| ||||||||||    
T  21214246 aaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacat 21214326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 22456121 - 22456029
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||| ||||| ||||||| || |||| ||||||    
T  22456121 aaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaa 22456029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 25242184 - 25242128
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatt 186  Q
    |||||||||||||||  | |||| |  |||||||||||||| |||||||||||||||    
T  25242184 aacacaaaaaactatgttacaaactactatgttttagttttcttaataagtgtgatt 25242128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 46918326 - 46918234
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||||| |||||| | ||||| |||| | || |||| || |||||| |||| ||||| ||||||||||| ||||||| || |||| ||||||    
T  46918326 aaattaagtgcaaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaa 46918234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 47599583 - 47599619
Alignment:
Q  151 aattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  47599583 aatttttatgttttagtttttttaataagtgtaattt 47599619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 34890345 - 34890165
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  34890345 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 34890246  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  34890245 cctataaaact----ttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattt 34890165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 7858517 - 7858697
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||| |||| || ||| |||||||||||| | |||||||||| |||||||||| ||    
T  7858517 tttgtttattctcataaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatctt 7858616  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  7858617 cctataaaact----tttttcaaataaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgattt 7858697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 36190761 - 36190941
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  | ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  36190761 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatctt 36190860  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  36190861 cctataaaact----tttttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaacaagtgtgattt 36190941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 43216518 - 43216338
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||| |||| || ||||||||||| ||||||  ||||||||| |||||||||| ||    
T  43216518 tttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatctt 43216419  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43216418 cctataaaact----tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 43216338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 26483537 - 26483701
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||| ||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||| |||||||||| | || |||||| |    |    
T  26483537 aaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaact----t 26483632  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||  ||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  26483633 ttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtgattt 26483701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 29920439 - 29920259
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| ||||||||| | ||||||||||||||||| || ||||| | ||| ||||||||||||||||||||||||| |||||||||| ||    
T  29920439 tttgcttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatctt 29920340  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| ||| |    ||||| ||| | ||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||    
T  29920339 cccatgaaact----tattccaaagataacacaaaaaattgtacttcaaattcttatgttttagttttcttaataagtgtgattt 29920259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 7022569 - 7022394
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||||||||||||||||  |||||| || |||| ||    
T  7022569 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctat 7022470  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||  ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  7022469 aaaact----tttttcaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataaatgtgattt 7022394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 8711865 - 8712039
Alignment:
Q  4 tttgtttattctcataaa--ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||  | ||| ||||||| |||||||||||||||||  ||||||||| |    
T  8711865 tttgtttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatct 8711964  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgat 185  Q
    ||| |||||| |    | ||| ||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||    
T  8711965 tcctataaaact----ttttccaaa-aaaacacaaaaaactatactccaaa----tatgttttagtttttttaataagtgtgat 8712039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 16879563 - 16879382
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||| || ||||||||| |||| ||||||||||||||||| |||| || |||| ||||||||||||| |||| ||||| |||||||||||||    
T  16879563 tttgtttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatatt 16879464  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||| |||    | ||||  ||| ||||||||||||| |||||| ||||||||||| ||||||||||||| ||| |||||||||||    
T  16879463 cccatgaaa----tttatttcaaagaaaacacaaaaaattatacttcaaattcttatattttagttttttt-ataggtgtgatttga 16879382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 8709950 - 8709777
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||| | |||||||||||   |||| |||||||||  |||||||| | |||||||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctct--cttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccat 8709853  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | | |    ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8709852 gagact----tatttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtttttttattaagtgtgattt 8709777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 24892827 - 24893006
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggttttta-catat 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | |||| || ||| ||||||| ||||||||||||||||| |||||||  ||||    
T  24892827 tttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatat 24892926  T
Q  102 --tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
      ||| ||||||     || ||| ||| ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  24892927 cctcctataaaa----cgttttccaaagaaaacacaaaaaactatactctaaattcttatgtttaagttttcttaataagtgtg 24893006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 30575987 - 30575825
Alignment:
Q  22 ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtatt 121  Q
    ||||||||||||||| || |||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||||  ||||||   |   ||    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaacttt---tt 30575891  T
Q  122 ctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     |||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  30575890 ttaaagaaaacacaaaaaactttactccaaatttttatgttttagttttcttaataagtgtgattt 30575825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 15958084 - 15957900
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaatttt--ctctatcttccactttctccataatcaatagccaatgaaaatggtttttacata 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||  |||| |||| || ||| ||||||| ||||||| ||||||||| |||||||| ||    
T  15958084 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttactta 15957985  T
Q  101 ttcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttag--tttttttaataagtgtgattt 187  Q
    |||| |||||| |    | ||  ||| ||||||||| |||||||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  15957984 ttcctataaaact----tttttcaaagaaaacacaataaactatactccaatttcttatattttagtttttttttaataagtgtgattt 15957900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 28348603 - 28348756
Alignment:
Q  7 gtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccc 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||||||||||| |||| |||||||||||||||     
T  28348603 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttttccataaccaatagccaatggaaattgtttttacatattcct 28348701  T
Q  106 ataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgtttt 164  Q
    |||||| |    | ||| ||| |||| |||||| |||||||||||||||||||||||||    
T  28348702 ataaaact----ttttccaaagaaaatacaaaatactatactccaaattcttatgtttt 28348756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 31734104 - 31734255
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||| ||||||  ||||||||||||||||| ||||||| || ||    
T  31734104 tttgtttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatctt 31734203  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattctta 158  Q
    || |||||| |    | ||  ||| |||||||||||||||||||||||||||||||    
T  31734204 cctataaaact----tttttcaaagaaaacacaaaaaactatactccaaattctta 31734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 34158462 - 34158281
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||    ||| | ||||| |||||| |||||||||| |||||||||| ||    
T  34158462 tttgtttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatctt 34158363  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||   | | | || |||| ||||||||| ||||||||||||| |||||||||||||| |||| ||||||| ||||||||    
T  34158362 cctataaa---acttttttttaaagaaaacacaacaaactatactccagattcttatgttttaattttcttaataaatgtgattt 34158281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 15824802 - 15824628
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||| ||| | ||||| |||||||||||       |||||||||| ||    
T  15824802 tttgtttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaatt------gtttttacatctt 15824709  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     |||| ||| |    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| ||| || |||||    
T  15824708 tccatgaaact----tattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttactaaatgcgattt 15824628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 35456195 - 35456011
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||| ||||  | ||| |||||||| |||||||||||||||| |||||||||| ||    
T  35456195 tttgtttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctt 35456096  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttt-----tagtttttttaataagtgtgattt 187  Q
     | |||||| |    | ||| ||| |||||| ||||||||||||| |||||||||||||||     ||||||| ||||||||||||||||    
T  35456095 tctataaaact----ttttc-aaaaaaaacataaaaaactatacttcaaattcttatgttttacactagttttcttaataagtgtgattt 35456011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 4047060 - 4046884
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||  | ||| ||||||| |||| ||||||||||||  |||||||||||| ||||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 4046961  T
Q  108 aaaaatagtgtattctaaataaaacaca-aaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    |||| |||| |||||||| ||||||||| || |||||||||||  |||| |||| ||||||||||||||||    
T  4046960 gaaact----tattataaagaaaacacacaaaaactatgctacaaattcttatactttaattttcttaataagtgtgattt 4046884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 13144056 - 13143936
Alignment:
Q  64 tccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttt 163  Q
    ||||||| ||||| | ||||||||| |||||||||| |||| |||||| |  | | ||| ||| ||||||||||||||||||||||||||||||||||||    
T  13144056 tccataaccaataactaatgaaaattgtttttacatcttcctataaaact--ttttttc-aaagaaaacacaaaaaactatactccaaattcttatgttt 13143960  T
Q  164 tagtttttttaataagtgtgattt 187  Q
    ||||||| ||||||||||||||||    
T  13143959 tagttttcttaataagtgtgattt 13143936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 2052830 - 2052931
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||| | ||||||| ||  ||||||||||||||||| |||||||||| |||||||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctc--tcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccat 2052927  T
Q  108 aaaa 111  Q
    ||||    
T  2052928 aaaa 2052931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 8107784 - 8107693
Alignment:
Q  8 tttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| ||||||||||    
T  8107784 tttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttatccataaccaatagccaatgaaaattgtttttacat 8107693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 7499715 - 7499812
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttcca-ctttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||  ||| ||||||| ||||||||||||||||| ||||||||||    
T  7499715 tttgtttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacat 7499812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 41086557 - 41086377
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| | ||  | ||| ||||| | ||||||||||||||||| |||||||||| ||    
T  41086557 tttgtttattctcataaaattaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatctt 41086458  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
       |||||| |    | ||  ||| |||||||||||||||||| | |||||| ||||  ||||||||| ||||||| | ||||||    
T  41086457 tatataaaact----tttttcaaagaaaacacaaaaaactataattcaaatttttattatttagttttcttaataaatatgattt 41086377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 13143753 - 13143854
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| |||| || |||  ||| || ||| ||||||||||||| |||||||||| ||    
T  13143753 tttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatctt 13143852  T
Q  103 cc 104  Q
    ||    
T  13143853 cc 13143854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 2052963 - 2053032
Alignment:
Q  118 tattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||||||| ||||||||||||| |||||| | |||| ||||||||||||||| ||||||||||||||||    
T  2052963 tattctaaagaaaacacaaaaaattatacttctaattattatgttttagttttcttaataagtgtgattt 2053032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 3642124 - 3642040
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 104  Q
    |||| ||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||| ||||| |||||||||| ||||    
T  3642124 aaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcc 3642040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 17713228 - 17713392
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||| | |||| ||||||| ||| || |||| ||||| ||||||||||| ||||||| || |||| |||||| |    |    
T  17713228 aaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaact----t 17713323  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||  | ||||||| |||||||  | |||| |  |||||||||||||||||||||||||||||||    
T  17713324 atttcaaggataacacaagaaactatgttgcaaaatactatgttttagtttttttaataagtgtgattt 17713392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 45190700 - 45190755
Alignment:
Q  134 caaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  45190700 caaaaaactatgctccaaattcttatgttttagttttcttaacaagtgtgatttga 45190755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 35525603 - 35525739
Alignment:
Q  30 aaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataa 129  Q
    |||||||||| |||||||||| ||||  | ||| ||||||| |||||| |||||||||| |||||||||| ||||  ||||| |    | ||  ||| ||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaact----tttttcaaagaa 35525698  T
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttt 172  Q
    |||||||||  |||||||| |||||||||||||||||||||||    
T  35525699 aacacaaaa--ctatactctaaattcttatgttttagtttttt 35525739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 44663944 - 44663783
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||| |||||| | |||||| ||| ||  | || || ||| ||| ||||||||||||||| |||||  ||||||||| || ||||||||    | |    
T  44663944 aaattaaacgcaaatcatattcaactttatccgtttttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataaaa----ttt 44663849  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| ||| |||||||   ||||||||||| ||||||||||  ||||||||| ||||||||||||||||    
T  44663848 attccaaagaaaacac---aaactatactctaaattcttataatttagttttcttaataagtgtgattt 44663783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 11158675 - 11158728
Alignment:
Q  132 cacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgat 185  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||| ||||    
T  11158675 cacaaaaaattatattccaaattcttatgttttagttttcttaataagtttgat 11158728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 187
Target Start/End: Complemental strand, 16358240 - 16358103
Alignment:
Q  45 ttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactat 144  Q
    |||||| |||| || ||| | |||||||||||| |||||||||| | |||||||| |||| || ||| |    | ||| ||| |||||| ||||||||||    
T  16358240 ttctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaact----ttttc-aaagaaaacaaaaaaaactat 16358146  T
Q  145 actccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||| |||||| |||| ||||| |||| ||||||||||||||||    
T  16358145 acttcaaatttttatattttaattttcttaataagtgtgattt 16358103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 7670749 - 7670813
Alignment:
Q  23 taaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaa 87  Q
    |||||| ||||||||||||||||||||| | ||||| |||||||||||  |||||| ||||||||    
T  7670749 taaatgaaaattacattcaattttctctctattccattttctccataactaatagcaaatgaaaa 7670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 8673386 - 8673466
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||| |||||||||||| |||| | || || |||||| ||||||||   ||||||||||| ||||||||||    
T  8673386 aaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacat 8673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 25195201 - 25195109
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||| |||||||||| |||| ||||||    
T  25195201 aaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa 25195109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 40773453 - 40773397
Alignment:
Q  128 aaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    |||||||| |||| ||||||||||||| |||| |||||||||||||||||| |||||    
T  40773453 aaaacacacaaaattatactccaaattgttatattttagtttttttaataaatgtga 40773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 13144132 - 13144081
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatct 54  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  13144132 tttgtttattttcataaaattaaatgcaaattacattcaattttctctctct 13144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 2628319 - 2628227
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||| |||||||| |  ||||||||| |||| |||| || |||||| |||| ||||| |||||||||||  ||||||||| |||| ||||||    
T  2628319 aaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaa 2628227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 8107668 - 8107608
Alignment:
Q  128 aaaacacaaaaaa-ctatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |||||||| ||||||||||||||||||| ||||| |||||||||||| ||| ||||    
T  8107668 aaaatacaaaaaaactatactccaaattcttatattttaatttttttaataaatgtaattt 8107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 26954547 - 26954455
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||| ||| || | |||| || |||||| |||| ||| | ||||||||||| |||||||||| |||| ||||||    
T  26954547 aaattaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaa 26954455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 41755915 - 41756010
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||| |||| |||||||||| ||||||||||||||||| ||| |||| || ||| ||||||| |||||  ||||||| ||  |||||||||    
T  41755915 tttgtttattatcatgaaattaaatgtaaattacattcaattttttctctctttca-tttttccataagcaataatcaatgaacattatttttacat 41756010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 7499821 - 7499884
Alignment:
Q  124 aaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||| ||||| ||||||  ||||||| |||||| |||||||||||||| ||||||| ||||||||    
T  7499821 aaagaaaacgcaaaaagttatactctaaattcctatgttttagttttcttaataaatgtgattt 7499884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 17336747 - 17336911
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| ||||   || || || ||| ||||||||   ||||||||||| |||||||||| |||| ||||||    | |    
T  17336747 aaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaa----ttt 17336842  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| |  ||||||||||||||  | |||| |  ||| |||||||||| ||||||||||||||||    
T  17336843 atttcaaagatgacacaaaaaactatgttacaaactactatattttagttttcttaataagtgtgattt 17336911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 33563681 - 33563496
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttc--cactttctccataatcaata--gccaatgaaaatggtttttacatattc 103  Q
    |||||||||| |||||||| | |||||||||||||| | |||| |||||  || ||||| ||||| ||| |  | |||||||||| |||||||||| |||    
T  33563681 ttattctcatgaaattaaacgtaaattacattcaatctcctctctcttctccattttctgcataaccaaaatggtcaatgaaaattgtttttacatcttc 33563582  T
Q  104 ccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    |||||||| |  | ||    ||| |||| |||||||   ||| |  |||||||||||||||| |||| ||||||| ||||||||||    
T  33563581 ccataaaacttatttaaaaaaaaaaaaatacaaaaagtaatattttaaattcttatgttttaattttcttaataaatgtgatttga 33563496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 34900037 - 34900096
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||||||||| ||||   |||||| ||||||||||||||| |||||||||||| |||||    
T  34900037 aacacaaaaaaatatatcgcaaattattatgttttagttttcttaataagtgtgttttga 34900096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 41362462 - 41362302
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||| ||||| |||  | || || |||||| ||||||||   ||||||||||| |||||||||| |||| |||||| |    |    
T  41362462 aaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaact----t 41362367  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    |||  ||| | |||||||||||||||  | |||| |  |||||||||||||| ||||||| ||||    
T  41362366 atttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatgtg 41362302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 6401732 - 6401784
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgt 182  Q
    |||||||||||||||||| ||||||  ||| |||||| ||| |||||||||||    
T  6401732 aacacaaaaaactatactacaaattactatattttagatttcttaataagtgt 6401784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 47867873 - 47868048
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |||| ||    
T  47867873 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 47867972  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47867973 aaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 47868048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 20281580 - 20281758
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  20281580 tttgtttattctcataaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 20281679  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgat 185  Q
    || |||||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20281680 cctataaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgat 20281758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 29203495 - 29203675
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  29203495 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 29203594  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || ||||||| |     ||  ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  29203595 cctataaaaaaa----tttgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattt 29203675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 17794704 - 17794522
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||||||| ||    
T  17794704 tttgtttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatctt 17794605  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    || ||||||    | ||||  ||| ||||| |||||||||||||| ||||||||| | |||||||||| ||||||||||||||||||    
T  17794604 cctataaaa----tttatttcaaagaaaacgcaaaaaactatacttcaaattctttttttttagttttcttaataagtgtgatttga 17794522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 2229241 - 2229416
Alignment:
Q  9 ttattctcataa-attaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||| || ||| ||||||| ||||||||||| ||||| |||||||||| |||| ||    
T  2229241 ttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 2229340  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2229341 aaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 2229416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 5483441 - 5483261
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||| |||||||||| ||    
T  5483441 tttgtttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatctt 5483342  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || || ||| |    |||| |||| ||||||||||||| |||||| |||||| ||||||||||||||| |||| |||||||||||    
T  5483341 cctattaaact----tattttaaagaaaacacaaaaaattatacttcaaatttttatgttttagttttcttaacaagtgtgattt 5483261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 35310905 - 35310725
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  35310905 tttgtttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctt 35310806  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     |||| ||| |    ||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||| | ||||||    
T  35310805 tccatgaaact----tattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttttcttaataaatatgattt 35310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 4058708 - 4058884
Alignment:
Q  8 tttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||| || ||| ||||||| ||||| ||||||||||| |||||||||| |||| |    
T  4058708 tttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttccta 4058807  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| |    | ||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  4058808 taaaact----tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgattt 4058884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 14332749 - 14332929
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| | ||||| |||| |||||| ||||| |||||||||| ||    
T  14332749 tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatctt 14332848  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  14332849 cctataaaact----ttttccaaagaaaacacaaaaaaccatattccaaattcttatgttttagttttcttaataagtgtgattt 14332929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 20716169 - 20716349
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  20716169 tttgtttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 20716268  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | |||||| |    | ||| ||| ||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20716269 tctataaaact----ttttccaaacaaaagtcaaaagactatactccaaattcttatgttttagttttcttaataagtgtgattt 20716349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 26916314 - 26916494
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | | |||| || ||| ||||||| ||||||||||| ||||| |||||||||| ||    
T  26916314 tttgtttattctcataaaattaaatgcaaattacattcaattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatctt 26916413  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  26916414 cctataaaact----tttttcaaagaaaacacaaaaaaccatactccaaattcttatgttttagttttcttaataagtgtgattt 26916494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 7654633 - 7654786
Alignment:
Q  30 aaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataa 129  Q
    ||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||| ||||||| || |||| |||||| |    | ||| ||| ||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaact----ttttccaaagaa 7654728  T
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  7654729 aacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgattt 7654786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 39078146 - 39078325
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| | |||| || ||| || ||||  |||||||||||||||| |||||||||| ||    
T  39078146 tttgtttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt 39078245  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39078246 ct-ataaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 39078325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 41414773 - 41414594
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| |||| || ||| || |||||||||||||||| ||||| |||||||||| ||    
T  41414773 tttgtttattcttataaaattaaatgcaaattacattcaattttttctctctttcattttttc-ataatcaatagccaataaaaattgtttttacatctt 41414675  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  41414674 cctataaaact----tttttcaaagaaaacacaaaaaactatactccatattcttatgttttagttttcttaataagtgtgattt 41414594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 10069686 - 10069866
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||| |||||||||||||  | |||| |||||| ||||||| ||||||||||||||||| |||||||||| ||    
T  10069686 tttgtttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctt 10069785  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | |||||| |    | ||   || |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  10069786 tctataaaact----tttttcgaagaaaatacaaaaaactatactacaaattcttatgttttagttttattaataagtgtgattt 10069866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 28669163 - 28668984
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| |||| || ||| || ||||  |||| ||||||||||| |||||||||| ||    
T  28669163 tttgtttattctcataaaattaaatacaaattacattcaattttctctctctttcattttttc-ataactaataaccaatgaaaattgtttttacatttt 28669065  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || ||||||      | ||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  28669064 cctataaaacc----ttttctaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgattt 28668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 56318233 - 56318053
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||||| |||| || ||| ||||||| ||||||| ||||||||| |||||||||| ||    
T  56318233 tttgtttattatcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatctt 56318134  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||  |    | ||| ||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||    
T  56318133 cctataaacct----ttttccaaagaaaacacaaaaaaccatactctaaattcttatgttttaatttttttaataagtgttattt 56318053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 1585510 - 1585332
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||||| |||| ||    
T  1585510 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctt 1585411  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     |||| ||| |    ||||  ||| |||||||  |||| ||||||||||| |||||||||||| |||| |||| |||||||||||    
T  1585410 tccatgaaact----tatttcaaagaaaacac--aaaattatactccaaaatcttatgttttacttttcttaacaagtgtgattt 1585332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 50080598 - 50080437
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||| ||||| | ||||| || ||||||         | |    
T  50080598 aaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggttttatattttccca---------ttt 50080508  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    || | ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  50080507 atacaaaagaaaacacaaaaaattatactcaaaattcttatgttttagttttcttaataagtgtgatttga 50080437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 8683462 - 8683289
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| | ||  | ||| ||||||| |||| ||||||||||||  |||||||||||| ||||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctctctttt--attttttccataaccaattgccaatgaaaattatttttacatatttccat 8683365  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    ||||| ||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  8683364 gaaact----tattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagtttttttaataagtgtgattt 8683289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 24940370 - 24940534
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||| |||||||||| |||||||||| |||| || ||||||||||| ||||| |||| |||||| |||||||||| |||  |||||| |    |    
T  24940370 aaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact----t 24940465  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| ||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  24940466 tttccaaagaaaatacaaaaaactatactccaaattcttacgttttagttttcttaataaatgtgattt 24940534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 42915523 - 42915695
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttct-ccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||  | ||| | |||||| |||| |||||||||||| |||||||||| || |||    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttcca 42915622  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    | ||| |    ||||| ||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  42915623 tgaaact----tattccaaagaaaacacaaaaaactatgctacaaattcttatattttagtttttttaataagtgtg 42915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 55580658 - 55580836
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttcca-ctttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||| |||| ||  ||| |||||||  |||||||||||||||| |||||||||| |    
T  55580658 tttgtttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatct 55580757  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    ||| ||| || |    | ||| ||| |||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  55580758 tcctatacaact----ttttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttttcttaataaatgtga 55580836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 16604982 - 16604837
Alignment:
Q  30 aaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataa 129  Q
    ||||||||||||||||||||| |||| || ||| |||||||  |||||||||||||||| ||||| |||| |||| |||||| |    | ||  ||| ||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaact----tttttcaaagaa 16604887  T
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataag 179  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  16604886 aacacaaaaaactatactctaaattcttatgttttagttttcttaataag 16604837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 48793784 - 48793613
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| |||||||||| | ||  | ||| | ||||| |||| |||||||||||| |||||||||| |||||||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctctctttt--atttttttcataaccaattgccaatgaaaattgtttttacatcttcccat 48793687  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    ||||| ||| |||||||||||  |||| || |||||||||||| ||||||||| ||||||||||||||||    
T  48793686 gaaact----tattccaaagaaaacacaaaa--ctatgctacaaattcttatgctttagttttcttaataagtgtgattt 48793613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 12002782 - 12002614
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||||||||||||||||||| |      ||||||| ||||||||||| |||| |||||| ||||| |||||||||| || |||| ||| || |      
T  12002782 aaattaaatgcaaattacattcaatatc-----tcttccagtttctccataaccaatggccaataaaaattgtttttacatctttccatgaaactaattc 12002688  T
Q  119 ---attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
       |    ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12002687 caaaaaaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttga 12002614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 14583718 - 14583900
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| |||||||||||||||||||||||||| || || ||||||| |||||   ||||| ||||||||||||||| |||||||||| ||    
T  14583718 tttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaat-gtttttacatctt 14583816  T
Q  103 cccataaaaatagtgtattctaaa-taaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||| ||| |    |||| ||||  |||||||||| |||||||    |||||||||| |||||||||| ||||||| ||||||||||    
T  14583817 cccatgaaact----tattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtgatttga 14583900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 25297385 - 25297289
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||  | ||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  25297385 tttgcttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacat 25297289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 52535748 - 52535654
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttac 97  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||| || |||| |||||||||||||||||  |||||||    
T  52535748 tttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 32323408 - 32323243
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||| ||||||| ||||||||||||| ||||||| |||||| ||||||||  | |||||||||| |||||||||| ||||||||||  |    |    
T  32323408 aaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccataaatct----t 32323314  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||| |||| |||||||||||||| ||||| |||||| |||  ||||| |||| |||| || | ||||||||    
T  32323313 attttaaagaaaacacaaaaaacaatacttcaaatttttaaattttaattttcttaacaaatttgatttga 32323243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 50145741 - 50145833
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||||||||  ||||||||| ||||||| || ||||||| ||||||||| ||||||||||||||||||| || ||||||| |||||||||||    
T  50145741 aaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccataaaa 50145833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 32203226 - 32203384
Alignment:
Q  20 aattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgta 119  Q
    ||||||||| || |||||||||||||||||||| || || ||| | |||||       ||||||||||| ||||||| || ||||||||||| |    ||    
T  32203226 aattaaatgtaatttacattcaattttctctatgtttcatttttttcataa-------ccaatgaaaattgtttttatatcttcccataaaact----ta 32203314  T
Q  120 ttctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||  ||| |||  |||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  32203315 tttcaaagaaacaacaaaaaactatactttaaattcttatgttttagtttttttaattagtgtgatttga 32203384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 32280109 - 32280000
Alignment:
Q  60 tttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttat 159  Q
    ||||||||||||||||||||||| ||||| ||||||||||||   ||| |||      ||||||||| ||||||||||||| ||||||||||||||||||    
T  32280109 tttctccataatcaatagccaattaaaattgtttttacatatcttcatcaaacc----tattctaaagaaaacacaaaaaattatactccaaattcttat 32280014  T
Q  160 gttttagttttttt 173  Q
    |||||  |||||||    
T  32280013 gttttttttttttt 32280000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 35529661 - 35529757
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||| ||| |||| || ||| ||||||| ||||| ||||||||||| ||||||||||    
T  35529661 tttgtttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacat 35529757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 5815474 - 5815598
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||||  |||||||||||||||||||| ||||||  ||| |||||||||||||| |||| |||||  ||||||||| ||| ||||||| |    |    
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaact----t 5815569  T
Q  119 attctaaataaaacacaaaaaactatact 147  Q
    |||  ||| ||||||||||||||||||||    
T  5815570 atttcaaagaaaacacaaaaaactatact 5815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 16473858 - 16473917
Alignment:
Q  128 aaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  16473858 aaaacacaaaaaactatactccaaattcttatattttagttttcttaataagtgtaattt 16473917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 21722778 - 21722663
Alignment:
Q  70 atcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagttt 169  Q
    |||||||| ||||||||||  ||||||||| |||| |||||| |    ||||  ||| |||||| |||| ||||||||  ||||||||||||||||||||    
T  21722778 atcaatagtcaatgaaaattatttttacatcttcctataaaact----tattacaaagaaaacataaaacactatacttaaaattcttatgttttagttt 21722683  T
Q  170 ttttaataagtgtgatttga 189  Q
    | ||||||||||||||||||    
T  21722682 tattaataagtgtgatttga 21722663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 19351851 - 19352023
Alignment:
Q  19 aaattaaatgcaaattacattcaatttt-ctctatcttccactttctccataatcaatagccaatgaaaatggttttta-catattcccataaaaatagt 116  Q
    |||||||||||||||||||||||||||| |||| | ||||| | | | |||||  |||||||||||||||| ||||||| ||| ||||||| ||| |       
T  19351851 aaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcccatgaaact--- 19351947  T
Q  117 gtattctaaataaaacaca---aaaaactatactccaaattctt-atgttttagtttttttaataagtgtgatttga 189  Q
     ||||  ||  ||||||||   |||||||||||||||| || || ||||||||||||| ||||||||||||||||||    
T  19351948 -tatttcaatgaaaacacacaaaaaaactatactccaatttttttatgttttagttttcttaataagtgtgatttga 19352023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 31280188 - 31280329
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||| || ||||||||| |||| | |||||||||||||||  |||||| ||||||||||| |||||||||||||||||  |||||||||       
T  31280188 tttgtttattctaatgaaattaaatacaaactgcattcaattttctct--cttcca-tttctccataa-caatagccaatgaaaattatttttacat--- 31280280  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattctta 158  Q
       |||||| |    ||||| ||| ||||||||||||||||||||| |||||||||    
T  31280281 ---ataaaact----tattccaaagaaaacacaaaaaactatactctaaattctta 31280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 5064802 - 5064638
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   | ||||||||| |||||||||| ||||  ||||| |    |    
T  5064802 aaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaact----t 5064707  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | ||||||||||| |||  | ||||||  |||||||||||||| ||||||||||||||||    
T  5064706 atttcaaagataacacaaaaaattatgttacaaattactatgttttagttttcttaataagtgtgattt 5064638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 52535630 - 52535580
Alignment:
Q  137 aaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  52535630 aaaactatactccaaattcttatgctttagttttcttaataagtgtaattt 52535580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 32203413 - 32203450
Alignment:
Q  152 attcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32203413 attcttatgttttagtttttttaataagtgtgatttga 32203450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 7438760 - 7438808
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  7438760 aacaccaaaaactatactccaaattattatgttttagttttcttaataa 7438808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 23978262 - 23978170
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||| |||||||||| |||| ||||||    
T  23978262 aaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaa 23978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 178
Target Start/End: Complemental strand, 17799277 - 17799126
Alignment:
Q  23 taaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattc 122  Q
    |||||||||||| |||| |||||  |||  ||  || |||||||||||  |||| ||||||||||| |||||||||| ||||||||||| ||    ||||    
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaacta----attc 17799182  T
Q  123 taaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
     ||  | ||||| | ||| ||||||||||||| | || |||||||||| |||||||    
T  17799181 caagaagaacaccagaaattatactccaaattatcatattttagttttcttaataa 17799126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 46070667 - 46070577
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| ||||  ||| || |||||| |||| ||| | ||||||||||| |||||||||| |||| ||||||    
T  46070667 aaattaaatgcaaagtgcattcaatttactct--ctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaa 46070577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 8178386 - 8178306
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||| | |||||||||| |||| |||| || |||||| |||| ||||| |||||  |||| ||||||||||    
T  8178386 aaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacat 8178306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 40553774 - 40553854
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||||| |||||| ||| ||||   || ||||||||||||||  |||| ||||||||| | ||||||||||    
T  40553774 aaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttacat 40553854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 37911889 - 37912053
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||| ||||| |||| | ||  | |||||| ||||||||   ||||||||||| ||||||||||||| | |||||| |    |    
T  37911889 aaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaact----t 37911984  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||| |||| | |||||||||||||||  |  ||| |  | | |||||||||| ||||||||||||||||    
T  37911985 attttaaagataacacaaaaaactatgttataaactactgtattttagttttcttaataagtgtgattt 37912053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 21722829 - 21722783
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctc 49  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  21722829 tttgtttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 31532495 - 31532445
Alignment:
Q  128 aaaacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
    |||||| |||||||||||||| ||||| | ||||||||||||| |||||||    
T  31532495 aaaacataaaaaactatactctaaattgtaatgttttagttttcttaataa 31532445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 32280150 - 32280104
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctc 49  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||    
T  32280150 tttgcttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 38140752 - 38140698
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    ||||||| ||||||||||| ||||| | ||| ||||||||| |||||||||||||    
T  38140752 aacacaagaaactatactcaaaattatcatgctttagttttcttaataagtgtga 38140698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 5841926 - 5841834
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||| |||||||| | || ||||||| |||| |||| || ||| || |||| ||||| |||||||||||  ||||||||| |||| ||||||    
T  5841926 aaattcaatgcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaa 5841834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 20644005 - 20644185
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| || |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  20644005 tttgtttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 20644104  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20644105 cctataaaact----ttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattt 20644185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 37562932 - 37562751
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||| ||||||||| |||||||||| ||    
T  37562932 tttgtttattctcataaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatctt 37562833  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||   | | | | | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37562832 cctataaa---actttttccaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 37562751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 43590127 - 43589952
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| | || ||    
T  43590127 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 43590028  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43590027 aaaact----ttttcaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 43589952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 6686380 - 6686556
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |||| ||    
T  6686380 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 6686479  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||   | | | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6686480 aaa---acttttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgattt 6686556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 42273640 - 42273818
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||  ||| || ||||||||||| ||||||||||||||||| |||||||||| ||    
T  42273640 tttgtttattctcataaaattaaatgcaaattgcattcaattttctct--ctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 42273737  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42273738 cttataaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 42273818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 34425322 - 34425497
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| ||||  | ||| ||||||||||||||||||||||||| |||||||||||||    
T  34425322 tttgtttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatatt 34425420  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    || |||||| |    | ||  ||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  34425421 cctataaaact----tttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg 34425497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 37522760 - 37522596
Alignment:
Q  4 tttgtttattctcataaa--ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |    
T  37522760 tttgtctattctcataaaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatct 37522661  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttt 170  Q
    ||| |||||| |    | ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  37522660 tcctataaaact----ttttccaaaaaaaacacaaaaaactatactccaaattcttatgttttagtttt 37522596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 11262054 - 11261874
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  11262054 tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 11261955  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||| ||||||||||||||| |||| |||||||  ||||||||||||||||    
T  11261954 cctataaaact----tttttcaaagaaaacacaaaaaattatactccaaattctcatgtgttagtttacttaataagtgtgattt 11261874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 38130286 - 38130113
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||| |||| || ||| ||||||| |||||||||||||||||  ||||||||||||    
T  38130286 tttgtttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatatt 38130187  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaa---actatactccaaattcttatgttttagtttttttaata 177  Q
    || |||||| |    | ||||||| ||||||||||||   |||||| |||||||||||||||||||||||| ||||||    
T  38130186 cctataaaact----ttttctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttttcttaata 38130113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 25840860 - 25841035
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||  | ||| ||||||| |||| | |||||||||| |||||||||| |||||||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccat 25840959  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    ||||| ||| ||||||||||||||||| || |||||| ||||| ||||||||| ||||||||||||||||    
T  25840960 gaaact----tattccaaagaaaacacaaaaaactatgctacaaatttttatgctttagttttcttaataagtgtgattt 25841035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 20039093 - 20039270
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||| | |||| || ||| | ||||| ||||||||||| ||||| | |||||||| ||    
T  20039093 tttgttaattctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatctt 20039192  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    || ||||||      | ||  ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  20039193 cctataaaacc----tttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 20039270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 17351384 - 17351559
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| |||||||||| ||||||||||||||||||||| | |  || ||||||||||||||||||||||| ||||| |||||||||| || ||||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccat 17351483  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    ||||| ||  |||| | ||||||||||||||||| || ||| || |||||||| ||||||| ||||||||    
T  17351484 aaaact----tattccaacgaaaataaaaaaaactatactccaagtttttacgtattagttttcttaataaatgtgattt 17351559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 19413138 - 19413303
Alignment:
Q  10 tattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccata 108  Q
    ||||||||| ||||||||||||||||||||| ||||||| || ||||  | ||| ||||||| |||| |||||||||||| |||||||||| ||||||||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  109 aaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
    ||| |    ||||  ||| ||||||||||||||||| || |||||||||||  ||||||||| |||||||    
T  19413238 aaact----tatttcaaagaaaacacaaaaaactatgctacaaattcttatactttagttttcttaataa 19413303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 38280838 - 38280946
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||| || ||| ||||||||||||| ||||||||||| |||||||||| ||    
T  38280838 tttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacatttt 38280937  T
Q  103 cccataaaa 111  Q
    || ||||||    
T  38280938 cctataaaa 38280946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 39505397 - 39505222
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||  | ||| |||||||  ||| |||||||||||| |||||||||| || ||||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttt-tccataacgaattgccaatgaaaattgtttttacatcttaccat 39505299  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaa-ctatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    ||||| ||| ||||||||||||| |||| || |||||||||||  |||| |||||||||||||||||||||    
T  39505298 aaaact----tattccaaagaaaacacaaaaaaactatgctacaaattcttatactttaatttttttaataagtgtgattt 39505222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 43454493 - 43454318
Alignment:
Q  4 tttgtttattctcata-aattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||  | ||||| | ||| ||||||  ||||||||| |||||||||||||    
T  43454493 tttgtttaatctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatatt 43454394  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgt 182  Q
    || |||||| |    |||   ||| |||||||||||||||||| | ||| ||||||||||||| |||| |||||||||||    
T  43454393 cctataaaact----tatgacaaagaaaacacaaaaaactatatttcaagttcttatgttttaattttcttaataagtgt 43454318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 42104402 - 42104262
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| ||||||||||||| ||  ||||||| |||||||||||| |||||||||||||||| |||||||||| ||||||| ||| |    |    
T  42104402 aaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaact----t 42104307  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgtttta 165  Q
     ||| ||| | |||||  |||| ||||||||||||||||||||||||    
T  42104306 gttccaaagagaacac--aaaattatactccaaattcttatgtttta 42104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 4463367 - 4463529
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||| ||||||||||||| |||||||||| |||| || ||| ||||||| ||||||||| ||||||| |||||||||| ||||||| |    ||  |    
T  4463367 aaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccatga----agctt 4463462  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| ||| |||||||  | ||| || || |||||||||||| ||||||||| ||||||||||||||||    
T  4463463 attccaaagaaaacac--acaaccatgctacaaattcttatgctttagttttcttaataagtgtgattt 4463529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 12792835 - 12792776
Alignment:
Q  128 aaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12792835 aaaacacaaaaaactatactccaatttcttatgttttagtttttttaataagtgtgattt 12792776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 32110993 - 32111144
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| |||| ||  || ||||||| |||||| |||||||||| |||||||||| ||    
T  32110993 tttgtttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatctt 32111092  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattctta 158  Q
    || || ||| |    | ||  ||| ||||||||||| | |||||||||||||||||    
T  32111093 cctatgaaact----tttttcaaagaaaacacaaaacattatactccaaattctta 32111144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 32017695 - 32017802
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |  ||| ||||||| |||||| |||||||||| |||||||||| ||    
T  32017695 tttgtttattctcataaaattaaatgcaaattacattcaactttctctctctttc-gtttttccataaccaatagacaatgaaaattgtttttacatctt 32017793  T
Q  103 cccataaaa 111  Q
    || ||||||    
T  32017794 cctataaaa 32017802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 7071234 - 7071333
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||| ||||||||||||||||||| |  ||||||| ||||||| |||||||||| ||||||||||  ||||||||| |||||||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcccat 7071333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 5984285 - 5984126
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaat-------gaaaatggttttt 95  Q
    |||||||||||||||||| ||||||| |||||||||| ||| |||||| |||| || |||||| |||| ||||| |||||       |||||| ||||||    
T  5984285 tttgtttattctcataaaattaaatgtaaattacattaaatattctctctctttcattttctctataaccaataaccaatagtcaatgaaaattgttttt 5984186  T
Q  96 acatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttat 159  Q
    ||||||| | |||||| |    ||||| ||| ||||||||||||||||||||| ||||||||||    
T  5984185 acatatttctataaaact----tattccaaagaaaacacaaaaaactatactctaaattcttat 5984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 8225454 - 8225608
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaa-atggtttttacatat 101  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||  |||| || ||| ||||||| |||||||||||||||  |  ||||||||| |    
T  8225454 tttgtttattctcataaaattaaatgcaaattacgttcaattttctc--tctttcattttttccataaccaatagccaatgaaattttttttttacattt 8225551  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgtt 162  Q
    ||| |||||| |    | ||| ||| |||| ||||||||||||| ||||||||||| ||||    
T  8225552 tcctataaaact----ttttccaaagaaaatacaaaaaactatagtccaaattcttttgtt 8225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 41625678 - 41625519
Alignment:
Q  6 tgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 104  Q
    |||||||| |||| ||||||||| ||||||||||| ||||||| || ||||||| ||| | ||||||||||||| |||||||||  ||||||||| ||||    
T  41625678 tgtttattttcatgaaattaaattcaaattacatttaattttccctctcttcca-ttttttcataatcaatagcgaatgaaaataatttttacatcttcc 41625580  T
Q  105 cataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttt 170  Q
     || ||| |    ||||  ||| |||||||||||||||||| |  |||||||||||||||||||||    
T  41625579 tatgaaact----tatttcaaagaaaacacaaaaaactata-tttaaattcttatgttttagtttt 41625519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 9957586 - 9957425
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||  |||| || ||| | ||||| ||||||||||||||||| |||||||||| ||    
T  9957586 tttgtttattctcataaaattaaatgcaaattacattcaactttctc--tctttca-ttttttcataaccaatagccaatgaaaattgtttttacatctt 9957490  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||                   ||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  9957489 cc-------------------aaagaaaacac-aaaaactatactccaaattctcatgttttagttttcttaataagtgtgattt 9957425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 12729933 - 12729875
Alignment:
Q  128 aaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  12729933 aaaacacaaaaaactatactccaatttcttatgttttagtt-ttttaataagtgtgattt 12729875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 23233445 - 23233582
Alignment:
Q  46 tctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactata 145  Q
    ||||| |||| || ||||||||||| ||||||  ||| ||||  ||||||||||||||| |||||  |   || ||| ||| ||||||||||||||||||    
T  23233445 tctctctctttcattttctccataaccaatagttaataaaaactgtttttacatattcctataaagtt---gttttc-aaagaaaacacaaaaaactata 23233540  T
Q  146 ctccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||||||||||||||| ||| | ||||||||||||||    
T  23233541 cgtcaaattcttatgttttagatttctcaataagtgtgattt 23233582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 32019925 - 32019980
Alignment:
Q  120 ttctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaa 175  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  32019925 ttctaaagaaaacacagaaaactatactccaaattcttatgttttagttttcttaa 32019980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 11858311 - 11858401
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggttt 93  Q
    ||||||||||||||| || |||||| |||||||| ||||||||| ||| | ||||| ||||||||||||||||| ||||| ||||| ||||    
T  11858311 tttgtttattctcatgaacttaaatacaaattacgttcaattttttctcttttccattttctccataatcaataaccaataaaaattgttt 11858401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 30893350 - 30893243
Alignment:
Q  73 aatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttt 172  Q
    |||| ||||| |||||  ||||||||| || |||||||| ||    |||||||  ||||||||| ||||||||||||||||| | ||||||||||||| |    
T  30893350 aataaccaataaaaattatttttacatctttccataaaatta----attctaagaaaaacacaagaaactatactccaaattatcatgttttagttttct 30893255  T
Q  173 taataagtgtga 184  Q
    ||||||||||||    
T  30893254 taataagtgtga 30893243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 12912448 - 12912292
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||| ||||| |||| |||| || ||| || | || ||||| ||||||||||| |||||||||| |||| |||||| |    |    
T  12912448 aaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaact----t 12912353  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagt 180  Q
    |||  ||| | |||||||||||||||| ||||| | | |||||||||||||| |||||||||    
T  12912352 atttcaaagataacacaaaaaactatattccaactac-tatgttttagttttcttaataagt 12912292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 12730150 - 12730103
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctct 50  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  12730150 tttgtttattctcataaaattaaatgcaaattacattcaattttctct 12730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 10154082 - 10153990
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| || | |||| || |||||| || | ||||| ||||||||||| |||||||||| |||| ||||||    
T  10154082 aaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaa 10153990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 16153499 - 16153335
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||| |||| | |||| ||||| |||| | || ||||||||| ||||||||   ||||||||||| |||||||||| |||| |||||| |    |    
T  16153499 aaattaaatacaaagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat-gtttttacatcttcctataaaact----t 16153405  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttag-tttttttaataagtgtgattt 187  Q
    |||  ||| | |||||||||||||||  | |||| | ||||||||||| |||||||||||||| ||||||    
T  16153404 atttcaaagataacacaaaaaactatgttacaaactattatgttttagttttttttaataagtatgattt 16153335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 12792971 - 12792929
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattt 45  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  12792971 tttgtttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 32079618 - 32079670
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgt 182  Q
    |||| ||||||||||| |||||||| | ||||||||||||| |||||||||||    
T  32079618 aacataaaaaactataatccaaattataatgttttagttttcttaataagtgt 32079670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 104392 - 104345
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctct 50  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  104392 tttgtctattctcataaaattaaatgcatattacattcaattttctct 104345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 29493559 - 29493508
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtg 181  Q
    |||||||||| |||||||||||||| ||||||||| || |||||| ||||||    
T  29493559 aacacaaaaagctatactccaaattattatgttttggtatttttattaagtg 29493508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 3463969 - 3463877
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||| ||||| ||||||| || |||| ||||||    
T  3463969 aaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaa 3463877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 5369185 - 5369093
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | ||||||||   | || |||| || |||||| |||| ||| | ||||||||||| |||||||||| |||| ||||||    
T  5369185 aaattaaatgcaaagtgcattcaataagccctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaa 5369093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 7645399 - 7645216
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatctt---ccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  |   ||| |||||||||||| |||||||||||||||| ||||||||||    
T  7645399 tttgtttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacat 7645300  T
Q  100 attcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||||||| ||| |    ||||||||  ||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  7645299 gttcccatgaaatt----tattctaaggaaaacacaaaatattatactccaaattcttatgttttagttttcttaataagtgtgattt 7645216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 9864886 - 9864705
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||  |||||| |||||||||||||||| |||||||||||| |||||||| | ||    
T  9864886 tttgcttattctcatgaaattaaatgcaaattacattcaattttatct--cttccattttctccataatcaattgccaatgaaaattgtttttacctctt 9864789  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaa-ctatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||| ||| |    ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9864788 cccatgaaact----tattccaaagaaaacacaaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttga 9864705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 41528247 - 41528428
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  41528247 tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 41528346  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatg-ttttagtttttttaataagtgtgattt 187  Q
    || ||||||| |    |||  ||| |||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||    
T  41528347 cctataaaaaaa----atttcaaagaaaacacaaaaaactatacttcaaattcttatgtttttaattttcttaataagtgtgattt 41528428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 3201317 - 3201497
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  3201317 tttgtttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 3201416  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | |||||| |    | ||| ||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  3201417 tctataaaact----ttttccaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgattt 3201497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 28599317 - 28599137
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| |||| || ||| ||||||| |||||||||||||||||  ||||||||| ||    
T  28599317 tttgtttattctcataaaattaaatgcatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctt 28599218  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||  |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  28599217 cctataaatct----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaattt 28599137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 6110370 - 6110188
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatct--tccactttctccataatcaatagccaatgaaaatggtttttacata 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||  | || ||| ||||||| ||||||||||||||||| ||||||||||     
T  6110370 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 6110271  T
Q  101 ttcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |||||| |    | |||  || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  6110270 ttcctataaaact----ttttccgaagaaaacacaaaaagctatactccaaattcttatgttttagttttcttaataagtgtgattt 6110188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 12938233 - 12938412
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| |||||||||||||||||||||||  ||| ||| ||||  | ||||||||||||||||||||||||||||| |||||||||  ||    
T  12938233 tttgtttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacacttt 12938332  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatt 186  Q
    || |||||| |    ||||  ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12938333 cctataaaact----tatttcaaagaaagcacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 12938412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 35517119 - 35517294
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||||||||||||||||  ||||||||| |  | ||    
T  35517119 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcactat 35517218  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35517219 aaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 35517294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 19264090 - 19264271
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaa-ttacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||  | ||| ||||||| ||||||||||||||||| |||||||||| |    
T  19264090 tttgtttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatct 19264189  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||| |||||| |    | ||| ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  19264190 tcctataaaact----ttttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttttcttaataagtgtgattt 19264271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 25572037 - 25572216
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||| ||||||| ||||| ||||||||||| |||||||||| ||    
T  25572037 tttgcttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatctt 25572135  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| ||| |    ||||| ||| ||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||||||    
T  25572136 cccatgaaact----tattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtgattt 25572216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 33198800 - 33198624
Alignment:
Q  4 tttgtttattctcata-aattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||| ||||| ||||| |||||||||| ||    
T  33198800 tttgtttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatctt 33198701  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    || |||||| |    | || |||| |||||||||||||||| | ||||||||||||| |||||||||| ||||||||||||    
T  33198700 cctataaaact----tcttttaaagaaaacacaaaaaactagagtccaaattcttatattttagttttcttaataagtgtg 33198624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 45085248 - 45085428
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||| || ||||||||| |||||||||| ||    
T  45085248 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatctt 45085347  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| |||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  45085348 cctataaaact----tttttcaaagaaaatacaaaaaactatactccaaattcttatgttttaattttcttaataagtgtgattt 45085428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 45660356 - 45660539
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||| |||| || ||||||||||| ||||||||||||||||| |||||||||| ||    
T  45660356 tttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 45660455  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaa---attcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||||||||||||||   ||||||||||||||||||| ||||||| ||||||||    
T  45660456 cctataaaact----tttttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttttcttaataaatgtgattt 45660539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 24204695 - 24204516
Alignment:
Q  7 gtttattctcataa-attaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccc 105  Q
    |||||||||||| | |||||||| |||||| |||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| | |||||||||||||     
T  24204695 gtttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcct 24204596  T
Q  106 ataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    |||||| |    ||||| ||| ||||||||| ||| ||||||||||||||||| ||||||||||| || |||| ||||||||||    
T  24204595 ataaaact----tattccaaagaaaacacaataaattatactccaaattcttaggttttagttttcttgataaatgtgatttga 24204516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 6766103 - 6765920
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttcca-ctttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||  ||| ||||||| |||||| |||| ||||| |||||||||| |    
T  6766103 tttgtttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatct 6766004  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||| ||||||    | ||||| ||  |||||| ||||||||||||| |||||| |||||||||| |||| ||||||||||||||||||    
T  6766003 tcctataaaa----tttattccaatgaaaacataaaaaactatacttcaaatttttatgttttaattttcttaataagtgtgatttga 6765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 44454987 - 44455162
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||||||||||  || ||||||| |||||| |||||||||||||||||  |||  ||||||| | |||||||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatg--aattttttttacgttttcccat 44455084  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
     ||| |    ||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| | ||||||||    
T  44455085 gaaact----tattcaaaataaaacacaaaaaactatactccaaattcatatattttagttttcttaataaatatgatttga 44455162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 8701609 - 8701773
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||| |||||| |||| |||||||||| ||||||| ||| ||||||| ||||||||||||||||| |||||||||| ||||||| ||| |    |    
T  8701609 aaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaact----t 8701704  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| ||| |||||| |||||||||| || |||||| ||||||||||||||| |||||||| |||||||    
T  8701705 attccaaagaaaacataaaaaactatgctacaaatttttatgttttagttttcttaataagcgtgattt 8701773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 29524205 - 29524030
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||  | ||| ||||||| |||| |||||||||||| |||||||||| |||||||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 29524106  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    ||||| ||| ||||||||||||| ||| || |||||||||||| |||||||||  |||||||||||||||    
T  29524105 gaaact----tattccaaagaaaacacaaaaaattatgctacaaattcttatgctttagttttcataataagtgtgattt 29524030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 178
Target Start/End: Original strand, 5963210 - 5963362
Alignment:
Q  21 attaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtat 120  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| |||||  |||||||||  |||||||||| |    |||    
T  5963210 attaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacat-ctcccataaaact----tat 5963304  T
Q  121 tctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
    |||||| ||||||||||||| || |||| |||||||||| |||||||||| |||||||    
T  5963305 tctaaagaaaacacaaaaaattagactctaaattcttatattttagttttcttaataa 5963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 33677474 - 33677656
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||| | ||||| | ||||||||||| |||||| |||||||||| |||||||||| ||    
T  33677474 tttgtttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatctt 33677573  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    || |||||| |    || |  ||| |||||| |||||||||| || |||||| |||||||||||||||  ||||||| |||||||||    
T  33677574 cctataaaact----tagtaaaaaaaaaacataaaaaactattcttcaaatttttatgttttagttttcgtaataagcgtgatttga 33677656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 33 - 189
Target Start/End: Complemental strand, 35115943 - 35115790
Alignment:
Q  33 ttacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaa- 131  Q
    ||||||||||||||| || ||||||| ||||||||||| ||||| | ||||||||| |||||||||| || | |||||| |    ||||  ||| ||||     
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaact----tattaaaaaaaaaaa 35115848  T
Q  132 cacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  35115847 cacaaaaaactatactccaaattcttatgttttagttctcttaataagtgtgatttga 35115790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 35022903 - 35023071
Alignment:
Q  18 taaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaata--gccaatgaaaatggtttttacatattcccataaaaatag 115  Q
    |||||||||||||||||  |||||||||||||| ||| ||| ||||||| ||| |||||  || ||||||||| |||||||||| |||| || ||| |      
T  35022903 taaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctatgaaact-- 35023000  T
Q  116 tgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
      || || ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  35023001 --tactccaaa-aaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgaattga 35023071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 11617031 - 11617195
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||| ||||||||||| ||||||||||||||| ||||  | |||  | |||| ||||||||||||||||| |||||||||| |||| |||||| |    |    
T  11617031 aaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctataaaact----t 11617126  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||  ||| |||| || |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  11617127 ttttcaaagaaaataccaaaaactatactccaaattcttatgttttaattttcttaataagtgtgattt 11617195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 28858300 - 28858483
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || |||  | |||| |||||||||||||||||  ||||||||| ||    
T  28858300 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctt 28858399  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaa---actatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | |||||| |    | ||  ||| ||||||||||||   |||||| |  ||||||||||||||||||||| |||||| |||||||||    
T  28858400 tctataaaact----tttttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttttcttaatatgtgtgattt 28858483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 14873953 - 14874105
Alignment:
Q  4 tttgtttattctcata-aattaaa-tgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||| ||| |||| || ||||||||||| |||||||||||||||||  ||||||||| |    
T  14873953 tttgtttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatct 14874052  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattctta 158  Q
    ||| |||||| |    | ||  ||| ||||||||||||||||||||||||| |||||    
T  14874053 tcctataaaact----tttttcaaagaaaacacaaaaaactatactccaaactctta 14874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 40584567 - 40584436
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| |||| || |||  |||||| ||| | ||||||||||| |||||||||| ||    
T  40584567 tttgtttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatctt 40584468  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaa 138  Q
    ||||||||| |    ||||||||| |||||||||||    
T  40584467 cccataaaact----tattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 30830765 - 30830585
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||| | || || |||||| |||||||||| ||||||||| |  |||||| || ||    
T  30830765 tttgattattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatctt 30830666  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    | ||| ||| |    ||||  ||| ||||||||||||   ||||||||| ||||||||||||| |||| ||||||| ||| ||||    
T  30830665 ctcatgaaact----tatttcaaaaaaaacacaaaaagacatactccaatttcttatgttttaattttcttaataaatgtaattt 30830585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 39696968 - 39696877
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttt 94  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||| |||||| || ||||||||| ||||||||| |||||    
T  39696968 tttgtttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 32428021 - 32428147
Alignment:
Q  60 tttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaa-cacaaaaaactatactccaaattctta 158  Q
    ||||||| |||||||||| ||||||||||  ||||||||| || |||| ||| |    |||| |||| |||| ||| ||  |||||||||||||||||||    
T  32428021 tttctccgtaatcaatagtcaatgaaaattatttttacatgtttccatgaaact----tattataaaaaaaaacaccaaggactatactccaaattctta 32428116  T
Q  159 tgttttagtttttttaataagtgtgatttga 189  Q
    |||||||||||||||||||| | ||||||||    
T  32428117 tgttttagtttttttaataaatatgatttga 32428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 40808778 - 40808709
Alignment:
Q  118 tattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| ||| ||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||||||    
T  40808778 tattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtgattt 40808709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 26998324 - 26998488
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||| |||||||||| |||| |||||| |    |    
T  26998324 aaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaact----t 26998419  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||| |||| | |||||||||||||||  | |||| |   ||||||||||||| ||||||| ||||||||    
T  26998420 attttaaagataacacaaaaaactatcttacaaactaccatgttttagttttcttaataaatgtgattt 26998488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 43415468 - 43415572
Alignment:
Q  79 caatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
    |||||||||| |||||||||| |||| |||||| |    | || |||| ||||||||||||| |||||| ||||||||||| |||||||||| ||| |||    
T  43415468 caatgaaaattgtttttacatcttcctataaaact----ttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttagtaa 43415563  T
Q  179 gtgtgattt 187  Q
    |||||||||    
T  43415564 gtgtgattt 43415572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 32010109 - 32010270
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||| ||||| |||| | || || |||||| ||||||||   |||||||||||  ||||||||| |||| |||||| |    |    
T  32010109 aaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaact----t 32010204  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    |||  ||| | |||||||||||||||| | |||| |  ||||| |||||||| |||||||||||||    
T  32010205 atttcaaagataacacaaaaaactatattacaaactactatgtattagttttcttaataagtgtga 32010270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 11825385 - 11825346
Alignment:
Q  150 aaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  11825385 aaattcttatgttttagttttcttaataagtgtgatttga 11825346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 5280571 - 5280533
Alignment:
Q  135 aaaaaactatactccaaattcttatgttttagttttttt 173  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  5280571 aaaaaactatagtccaaattcttatgttttagttttttt 5280533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 5280642 - 5280592
Alignment:
Q  37 attcaattttctctatcttccactttctccataatcaatagccaatgaaaa 87  Q
    |||||||||||||| |||| || ||| ||||||| ||||||||||||||||    
T  5280642 attcaattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 38071003 - 38071087
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 104  Q
    |||||||||| ||| | |||||||||| |||||| ||| | |||||| ||||||||   ||||||||||| |||||||||| ||||    
T  38071003 aaattaaatgtaaagtgcattcaatttgctctattttc-attttctctataatcaactaccaatgaaaattgtttttacatcttcc 38071087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 32273678 - 32273770
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||| ||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||| ||||||| || |||| ||||||    
T  32273678 aaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaa 32273770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 6e-47; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 6191036 - 6191216
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| |||||||||| |||||| ||| |||| || ||||||||||| ||||||||||||||||| |||||||||| ||    
T  6191036 tttgtttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 6191135  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6191136 cctataaaact----tttttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 6191216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 14805866 - 14806040
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |||| ||    
T  14805866 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 14805965  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14805966 aaaact----ttttc-aaagaaaatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 14806040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 15252860 - 15253034
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |||| ||    
T  15252860 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15252959  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15252960 aaaact----ttttc-aaagaaaatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 15253034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 45485951 - 45486126
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||||||||||||||||  ||||||||| |||| ||    
T  45485951 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 45486050  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  45486051 aaaact----ttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgattt 45486126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 46760421 - 46760246
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |||| ||    
T  46760421 ttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 46760322  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46760321 aaaact----tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 46760246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 18102521 - 18102701
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || |||| || ||| ||||||| |||| |||||||||||| |||||||||| ||    
T  18102521 tttgtttattctcataaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 18102620  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  18102621 cctataaaact----tttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattt 18102701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 19912933 - 19912758
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||| ||||||||||| |||||||||| || | ||    
T  19912933 ttattctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacattttactat 19912834  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  19912833 aaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgattt 19912758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 25737791 - 25737616
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| |||| ||    
T  25737791 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 25737692  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| |||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  25737691 aaaact----ttttccaaagaaaacacacaaaactataccccaaatttttatgttttagttttcttaataagtgtgattt 25737616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 4910802 - 4910624
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||| |||||||| ||||||||||||||||||||||||| ||| |||| || ||| |||||||||||||||||||||||||  ||||||||| ||    
T  4910802 tttgtttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatctt 4910703  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||||||| ||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||||||    
T  4910702 cctataaaact----ttttctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttttttaaataagtgtgattt 4910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 35923248 - 35923422
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| || | ||    
T  35923248 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 35923347  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  35923348 aaaact----ttttccaaagaaaacac-aaaaactatactccaaatttttatgttttagttttcttaataagtgtgattt 35923422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 25944567 - 25944747
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  | ||| ||||||| |||| |||||||||||| |||||||||| ||    
T  25944567 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatctt 25944666  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| ||||||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  25944667 cctataaaact----ttttccaaagaaaacacaaaaacttatactccaaattcttatattttagttttcttaataagtgttattt 25944747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 47779600 - 47779775
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||  | ||| ||||||| || | |||||||||||| |||||||||| |||||||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccat 47779699  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    ||||||||| ||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||||||    
T  47779700 gaaact----tattctaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtgattt 47779775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 20123849 - 20123691
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  20123849 tttgtttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatctt 20123750  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgtttta 165  Q
     | |||||| |    | ||| ||| || |||||||||||||||||||||||||||||||||||    
T  20123749 gctataaaact----ttttccaaagaatacacaaaaaactatactccaaattcttatgtttta 20123691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 22632080 - 22632260
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||| ||||||| ||||| ||||||||||| |||||||||| ||    
T  22632080 tttgcttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatctt 22632179  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| ||| |    ||||  ||| |||||||||||| |||| || |||| | ||||| ||||||||| ||||||||||||||||    
T  22632180 cccatgaaact----tatttcaaagaaaacacaaaaatctatgctacaaacttttatgctttagttttcttaataagtgtgattt 22632260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 14574555 - 14574737
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| ||||||||||||| |||||||||||||| | ||||||||| || ||||||| ||||| ||||| |||||| ||||| ||||  ||||||||| ||    
T  14574555 tttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatctt 14574654  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||| ||| |    |||| | || |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||    
T  14574655 cccatgaaact----tattatcaagaaaacacaaaaaactatactccaaattcttatattttggttttcttaataagtgttatttga 14574737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 44682869 - 44683050
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||| |||||| || ||||||||||| |||||| |||||||||| |||||||||| ||    
T  44682869 tttgtttattctcatgaaattaattgcaaattacatccaattttctatatctttca-tttctccataaccaatagtcaatgaaaattgtttttacatctt 44682967  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    | ||| ||| |    ||||| ||| ||||||||||| | |||||||||||||||||| || ||||||| ||||| | ||||||||||    
T  44682968 cgcatcaaact----tattccaaaaaaaacacaaaatattatactccaaattcttattttctagttttcttaatgaatgtgatttga 44683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 11780009 - 11780174
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||| ||||||| ||||| |||||  ||||| ||||| ||||  ||||||||| ||    
T  11780009 tttgtttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatg-aaattatttttacatctt 11780107  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagttttttt 173  Q
    || ||||||    | |||| |||| ||||||| |||||||||| ||||||||||||| |||||||||||||    
T  11780108 ccaataaaa----tttattttaaagaaaacacgaaaaactatattccaaattcttatattttagttttttt 11780174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 15995710 - 15995893
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| ||||||||||||| |||||||||||||| | ||||||||| || ||||||| ||||| ||||| ||||| |||||| ||||  ||||||||| ||    
T  15995710 tttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctt 15995809  T
Q  103 cccataaaaatagtgtattctaaataaaacac-aaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
     |||| ||| |    |||| | || ||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||    
T  15995810 tccatgaaact----tattatgaagaaaacacaaaaaaactatactccaaattcttatattttggttttcttaataagtgttatttga 15995893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 47557770 - 47557663
Alignment:
Q  4 tttgtttattctcata-aattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| | |||| || ||| |||||||| |||||||||||||||| |||||||||| ||    
T  47557770 tttgtttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatctt 47557671  T
Q  103 cccataaa 110  Q
    || |||||    
T  47557670 cctataaa 47557663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 16917478 - 16917642
Alignment:
Q  18 taaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtg 117  Q
    ||||||||||||||||||| ||||||||||||||| | ||| ||||  ||||| ||||||  ||||||||| |||||||||| ||||||| ||| |        
T  16917478 taaattaaatgcaaattactttcaattttctctatttcccattttc-acataaccaatagttaatgaaaattgtttttacatcttcccatgaaact---- 16917572  T
Q  118 tattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| ||| |||| ||||||   |||| | |||||| |||||||||| |||| ||||||||||||||||    
T  16917573 tattccaaagaaaaaacaaaatgttatatttcaaatttttatgttttaattttcttaataagtgtgattt 16917642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 2610737 - 2610641
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||   | ||||||| ||||||||||| |||||||||| |||||  ||||||||||    
T  2610737 tttgtttattctcatgaaattaagtgcaaattacattcaatttttcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacat 2610641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 12632444 - 12632333
Alignment:
Q  72 caatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagttttt 171  Q
    ||||||||||||||||| |||||||||| |||| || ||| |    | ||  ||| |||||| ||||||||||||||||||||||||||||||| ||||     
T  12632444 caatagccaatgaaaattgtttttacatcttcctatgaaact----tttttcaaagaaaacataaaaaactatactccaaattcttatgttttaattttc 12632349  T
Q  172 ttaataagtgtgattt 187  Q
    ||||||| ||||||||    
T  12632348 ttaataaatgtgattt 12632333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 27810898 - 27810808
Alignment:
Q  10 tattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||| |||||  |||||||||| ||||| ||||| ||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacat 27810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 33153041 - 33153202
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||||| ||||||||||  |||   ||| | |||||||||||||| || ||||| | ||| |||||||||| || |||||||| |    |    
T  33153041 aaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattgtttttacatctttccataaaatt----t 33153136  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    |||  ||  | ||||||||||| |||||| |||| | ||||||||| |||||||||||||||||||    
T  33153137 atttcaagaagaacacaaaaaattatacttcaaactattatgtttttgtttttttaataagtgtga 33153202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 48413728 - 48413868
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||||||||||| ||||||||||||||  |||| | ||||||||||| |||||| |||||||||| |||||| ||| ||| ||||||| |    |    
T  48413728 aaattaaatgcaaatta-attcaattttctct--cttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaact----t 48413820  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagttttt 171  Q
    |||   || |||||||  |||| ||||||||||||||||||||| ||||||||    
T  48413821 att---aaaaaaacac--aaaattatactccaaattcttatgttgtagttttt 48413868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 37767110 - 37767011
Alignment:
Q  81 atgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagt 180  Q
    |||||||| ||||||| || ||||||| ||| |||| |    |||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||| |    
T  37767110 atgaaaattgtttttatatgttcccatgaaattagttt----taaagaaaacacaaaaaactatactccaaattatcatgttttagttttcttaataaat 37767015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 12633156 - 12633110
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctc 49  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  12633156 tttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35069007 - 35068961
Alignment:
Q  1 ttctttgtttattctcataa-attaaatgcaaattacattcaatttt 46  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  35069007 ttctttgtttattctcataatattaaatgcaaattacattcaatttt 35068961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 4237868 - 4237788
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    ||||||||||||||||| |||||||| | | | ||||||| ||||| | ||||||||||||||| |||||  |||||||||    
T  4237868 aaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacat 4237788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 9158081 - 9158188
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||| | | |||| || ||| | ||||| |||| ||||| |||||| |||||||||| ||    
T  9158081 tttgtttattcttataaaattaaatgcaaattacattcaaatttttttctctttca-ttttttcataaccaatggccaaagaaaattgtttttacatctt 9158179  T
Q  103 cccataaaa 111  Q
    || ||||||    
T  9158180 cctataaaa 9158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 27810787 - 27810735
Alignment:
Q  135 aaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||||| |||||||||||||||||||||  ||||| ||||||||||||||||    
T  27810787 aaaaaacaatactccaaattcttatgtttctgttttgttaataagtgtgattt 27810735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 19492548 - 19492391
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||| ||||||| |||||||||||| | ||||| | ||||||||||| ||| || | || ||||| |||||| |||||| |||| |  | | | |    
T  19492548 aaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgtttttgcatattaccatgatga-aattt 19492450  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
    |||  ||| |||| |||||||  ||||||| ||||| ||||||||||||||| |||||||    
T  19492449 att-aaaaaaaaatacaaaaagttatactctaaatttttatgttttagttttcttaataa 19492391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 35888122 - 35887958
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||| ||||||||| | |||||||||| |||| | ||  | |||||| ||||||||   | ||||||||| |||||||||| |||| |||||| |    |    
T  35888122 aaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagt----t 35888027  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | ||||||||||| |||  | |||| |  |||||||||||||||||||||||||||||||    
T  35888026 atttcaaagataacacaaaaaattatgttacaaactactatgttttagtttttttaataagtgtgattt 35887958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 38260323 - 38260487
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||| ||||| |||| |||| || |||||| ||||| |||| |||||||||||  ||||||||  || | |||||| |    |    
T  38260323 aaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaact----t 38260418  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||  | |||||||||||||||| | |||| |   |||||||| |||||||||||||||||||||    
T  38260419 atttcaagaataacacaaaaaactatattacaaactacaatgttttaatttttttaataagtgtgattt 38260487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 39170541 - 39170621
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||| | |||||||||| || | |||| || |||||| |||||||||  | ||||||||| ||||||||||    
T  39170541 aaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacat 39170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 189
Target Start/End: Original strand, 11780188 - 11780218
Alignment:
Q  159 tgttttagtttttttaataagtgtgatttga 189  Q
    |||||||||||||||||||||||||||||||    
T  11780188 tgttttagtttttttaataagtgtgatttga 11780218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 31549790 - 31549745
Alignment:
Q  142 tatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||||| || ||||||||||||||| |||||||||| |||||    
T  31549790 tatactccaattttttatgttttagttttcttaataagtgcgattt 31549745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 24151734 - 24151643
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||| ||||||| |||||||||||| |||| |||| |  |||||| |||| |||||  || ||||||| |||||||||| |||| ||||||    
T  24151734 aaattacatgcaaagtacattcaatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaa 24151643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 30082355 - 30082435
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||||||| ||||||||||  ||| | ||| | | |||||||||||| || ||||| | ||| ||||||||||    
T  30082355 aaattaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgtttttacat 30082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 40560491 - 40560543
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgt 182  Q
    ||||||||||| |||||  |||||| ||| || ||||||||||||||||||||    
T  40560491 aacacaaaaaattatacctcaaattattaagtgttagtttttttaataagtgt 40560543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 6e-47; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 2126029 - 2126209
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  2126029 tttgttcattctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 2126128  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  2126129 cctataaaact----ttttccaaagaaaacacaaaaaactatattccaaattcttatgttttagttttcttaataaatgtgattt 2126209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 28120925 - 28120748
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||| |||||||||| ||    
T  28120925 tttgtttattcacataaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatctt 28120826  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    |||||||||    |  ||| |||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||| |||||    
T  28120825 cccataaaa----ttcattttaaaaaaaacacaaaaaactatactccacattcttatttcttagttttcttaataaatgtga 28120748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 15959810 - 15959630
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  | ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  15959810 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatctt 15959711  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  15959710 cctataaaact----tttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataaatgtgattt 15959630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 32624175 - 32623995
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||| |||||||||||| |||||||||| ||    
T  32624175 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 32624076  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  32624075 cctataaaact----tttttcaaagaaaacacaaaaaactacactccaaattcttatgttttagttttcttaataattgtgattt 32623995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 6785447 - 6785622
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  6785447 tttgtttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 6785546  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    |  |||||| |    | ||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  6785547 catataaaact----ttttcaaaagaaaacacaaaaaactatactcc-aattcttatgttttagttttcttaataagtgtg 6785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 6786829 - 6787009
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| || |||| || ||| ||||||| ||||||||||||||||| || ||||||| ||    
T  6786829 tttgtttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatctt 6786928  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||| |    | ||| ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  6786929 catataaaact----ttttccaaagaaaacacaaaaaactatactccaaattctcatgttttagttttcttaataagtgtgattt 6787009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 39555756 - 39555576
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  39555756 tttgtttattctcataaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 39555657  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | |||||| |    | ||  ||| |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  39555656 tctataaaact----tttttcaaagaaaacacaaaaacctatactccaaattcttatgttttaattttcttaataagtgtgattt 39555576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 24190466 - 24190640
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| | |  ||    
T  24190466 ttattctcataaaattaaatgcaaattacatt-aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccgtat 24190564  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24190565 aaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 24190640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 33369544 - 33369721
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  |||| || ||| ||||||| ||||||||||||||||| ||||||||||  |    
T  33369544 tttgtttattctcataaaattaaatgcaaattacattcaattttctc--tctttcattttttccataaccaatagccaatgaaaattgtttttacat-ct 33369640  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||| |    | ||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  33369641 catataaaact----ttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgattt 33369721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 24728781 - 24728616
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||||||||||||||| |||||||||| ||||  | ||| |||||||||||| |||||||||||| |||||||||| ||||||| ||| |    |    
T  24728781 aaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaact----t 24728686  T
Q  119 attctaaataaaacac-aaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| ||| ||||||| |||||||||| || |||||||||||||||||||||| ||||||||||||||||    
T  24728685 attcgaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgattt 24728616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 42965984 - 42965806
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  42965984 tttgtttattcttataaaattaaatgcaaattacattcaattttctctctctttca-tttttccataaccaatagccaatgaaaattgtttttacatctt 42965886  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || ||||||      | ||| ||| |||||||||||||||| ||| |||||| ||||||||||||||| ||||||||| ||||||    
T  42965885 cctataaaa-----tttttccaaagaaaacacaaaaaactaaacttcaaatttttatgttttagttttcttaataagtatgattt 42965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 3076291 - 3076466
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||  | ||| ||||||| |||| ||||||||||||  ||||||||| |||||||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccat 3076390  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    ||||| ||||||||||||||||||||| || |||||||||||| |||| |||| ||||||||||||||||    
T  3076391 aaaact----tattccaaataaaacacaaaaaactatgctacaaattcttatgctttaattttcttaataagtgtgattt 3076466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 37735553 - 37735395
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| | ||    
T  37735553 tttgtttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttctt 37735454  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgtttta 165  Q
    ||||| ||| |    ||||| ||| |||| ||||||||||||||| || ||||||||||||||    
T  37735453 cccatgaaact----tattccaaagaaaatacaaaaaactatacttcagattcttatgtttta 37735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 13136720 - 13136544
Alignment:
Q  4 tttgtttattctcataaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattc 103  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||||  ||| || ||| ||||||| |||||||||||| |||| |||||||||| |||    
T  13136720 tttgtttattctataaaattaaatgcaaattatattcaattttctct--ctttcattttttccataaccaatagccaatggaaattgtttttacatcttc 13136623  T
Q  104 ccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    | ||||      | | || |||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  13136622 ctataat-----ttttttttaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataagtgtgattt 13136544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 32983340 - 32983162
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||| || ||| ||||||| |||| |||||||||||| |||||||||| ||    
T  32983340 tttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatctt 32983242  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  ||||||      | ||| ||| |||||||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||    
T  32983241 cttataaaa-----cttttccaaagaaaacacaaaaaactatacttccaatttttatgttttagttttcttaataagtgtgattt 32983162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 39932742 - 39932562
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| ||||  | ||||||||| | ||||||||||| ||||| ||||||| || ||    
T  39932742 tttgtttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatctt 39932643  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |  |||||| |    ||||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||    
T  39932642 cttataaaact----tattaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttttttagtgtgattt 39932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 45226129 - 45226309
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | |||| || ||| ||||||| |||||| |||||||||| |||||||| | ||    
T  45226129 tttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtctt 45226228  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| |||| ||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  45226229 cctataaaact----tttttcaaagaaaatacataaaactatactctaaattattatgttttagttttcttaataagtgtgattt 45226309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 40718666 - 40718849
Alignment:
Q  1 ttctttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| || || | ||||||||||||||||| |||| ||||     
T  40718666 ttctttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaa 40718765  T
Q  100 attcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     |||  |||||| |    | ||  ||| ||||||||||||||||||||||||||| |||| ||||||||||  |||||||||||||||    
T  40718766 cttcatataaaact----tttttcaaagaaaacacaaaaaactatactccaaatttttatattttagttttcgtaataagtgtgattt 40718849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 47600209 - 47600030
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | |||| || ||| | ||||| ||||||||||||||||| |||||||||| ||    
T  47600209 tttgtttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatctt 47600110  T
Q  103 cccataaaaatagtgtattctaa-ataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    || |||||| |  | | || ||| || | ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  47600109 cctataaaact--ttttttttaagattacacaaaaaaaactatactctaaattcttatgttttaatttttttaataaatgtg 47600030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 2246184 - 2246026
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||| ||  ||||||||||||||||  ||||||||||||    
T  2246184 tttgtttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatatt 2246085  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgtttta 165  Q
    || |||||| |    ||||  ||| ||||||||||||||||||||| ||||| | ||||||||    
T  2246084 cctataaaact----tatttcaaagaaaacacaaaaaactatactctaaattttaatgtttta 2246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 12449137 - 12448969
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  | ||| ||||||| |||| |||||||||||| |||||||||| ||    
T  12449137 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatctt 12449038  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaat 176  Q
    || |||||| |    | ||  ||| |||||||||||||||||||||||||||||||| ||||| |||| |||||    
T  12449037 cctataaaact----tttttcaaagaaaacacaaaaaactatactccaaattcttat-ttttaattttcttaat 12448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 3875191 - 3875009
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatca----atagccaatgaaaatggtttttaca 98  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| |||| || ||| ||||||| ||    ||||||||| ||||| |||||||||    
T  3875191 tttgtttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttaca 3875092  T
Q  99 tattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||| |||||| |    | ||| ||| |||||||  ||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  3875091 tattcctataaaact----ttttcaaaaaaaaacac--aaaactatacttcaaattcttatgttttacttttcttaataagtgtgattt 3875009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 46 - 189
Target Start/End: Original strand, 52984967 - 52985106
Alignment:
Q  46 tctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactata 145  Q
    ||||| ||||| | ||| ||| ||||||||||||||||||||| |||||||||| ||||| | ||| |    ||||| ||| ||||||||||||||||||    
T  52984967 tctctctcttctattttatccctaatcaatagccaatgaaaattgtttttacatcttcccgtgaaact----tattccaaagaaaacacaaaaaactata 52985062  T
Q  146 ctccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    |||||||||||||||| |||||||| ||||||||||||||||||    
T  52985063 ctccaaattcttatgtattagttttcttaataagtgtgatttga 52985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 10558920 - 10558756
Alignment:
Q  10 tattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccata 108  Q
    ||||||||| |||||||||| |||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccata 10558821  T
Q  109 aaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||    ||||| ||| |||||||   |||||||||||||       ||||| ||||||| ||||||||||||||||    
T  10558820 aaaat----tattccaaagaaaacac---aaactatactcca-------atgttctagttttcttaataagtgtgattt 10558756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 28016914 - 28016736
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| | ||  | ||| |  |||| ||||||||||||||||| |||||||||| ||    
T  28016914 tttgtttattctcataaaattaaatgcaagttacattcaattttctctctttt--attttttttataaccaatagccaatgaaaattgtttttacatctt 28016817  T
Q  103 cccataaaa-atagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| ||    | ||| ||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  28016816 cctataaaacat----ttttc-aaagaaaacaccaaaaactatactctaaattcttatgttttagttttcttaataagtgtgattt 28016736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 46542975 - 46543153
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||  ||| || |||||||| || |||||||||||| |||| |||||| ||| ||    
T  46542975 tttgtttattctcataaaattaaatgcaaattgcatttaattttctct--ctttcattttctccacaaccaatagccaatggaaattgttttttcatctt 46543072  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||  |    | ||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  46543073 cctataaattt----tttttcaaagaaaacacaaaaaactatactccaaatttttatgttttagtttttttaataaatatgattt 46543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 35691388 - 35691563
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttcca-ctttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||  ||| ||||||| ||||||||||| ||||| |||||||||| | || |    
T  35691388 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctcccta 35691487  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| |    | ||  ||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  35691488 taaaact----tttttcaaagaaaacacaaaaaattatactccaaattcttatgttttag-tttcttaataaatgtgattt 35691563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 181
Target Start/End: Complemental strand, 7468133 - 7467958
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | |||| || |||   | ||||||||||||||||||||| || ||||||| ||    
T  7468133 tttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatctt 7468034  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaacta-tactccaaattcttatgttttagtttttttaataagtg 181  Q
    ||  ||||| |    | ||| ||| ||||||||||||| || |||| |||||||||||||||||||||| ||||||||||    
T  7468033 cctttaaaact----ttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttttcttaataagtg 7467958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 11241079 - 11241198
Alignment:
Q  64 tccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttt 163  Q
    ||||||| ||||||||||||||||| | |||||||| |||| |||||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||    
T  11241079 tccataaccaatagccaatgaaaattggttttacatcttcctataaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttt 11241174  T
Q  164 tagtttttttaataagtgtgattt 187  Q
    || |||||||||||||||||||||    
T  11241175 taatttttttaataagtgtgattt 11241198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 44148997 - 44148826
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||  | ||| ||||||| |||| |||||||||||| |||||||||| |||||||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaattttctct--ctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccat 44148902  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    ||||| ||| ||||||||||||||||| || |||||||||||| |||||||||  |||||||||||||||    
T  44148901 gaaact----tattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcgtaataagtgtgattt 44148826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 43667471 - 43667293
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||  |||| || ||| ||||||| |||| |||||||||||| |||||||| | ||    
T  43667471 tttgtttattctcataaaattaaatgtaaattacattcaattttctc--tctttcattttttccataaccaatggccaatgaaaattgtttttacgtctt 43667374  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||  ||| ||||||||||||| ||||||  |||||||||||| ||| |||| ||||||| ||||||||    
T  43667373 cctataaaact----tttttcaaagaaaacacaaaaaattatactttaaattcttatgtcttaattttcttaataaatgtgattt 43667293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 33431552 - 33431729
Alignment:
Q  4 tttgtttattctcataaatt-aaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| | |||| ||||||||||| ||||||||||  ||| || |||||| |||| ||||||||||||||||| |||||| |||  |    
T  33431552 tttgtttattctcataaaatgaaatacaaattacatttaattttctct--ctttcattttctctataaccaatagccaatgaaaattgtttttccatcct 33431649  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatt 186  Q
    || |||||| |    | ||  ||| ||||||||||||||||| || |||||||||||| | ||||||| |||||||||||||||    
T  33431650 cctataaaact----tttttaaaaaaaaacacaaaaaactatgctacaaattcttatgatctagttttcttaataagtgtgatt 33431729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 298812 - 298656
Alignment:
Q  30 aaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataa 129  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||  ||||||||| ||||||||||       ||||||||| ||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccataaa-----cttattctaaagaa 298718  T
Q  130 aacacaaaaaactatactccaaat--tcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||||  |||||||||| ||| |  | ||||||||||||||| ||||||| | ||||||||    
T  298717 aacacatcaaactatacttcaagttattttatgttttagttttcttaataaatatgatttga 298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 1820405 - 1820578
Alignment:
Q  3 ctttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| || ||| | ||||| ||| ||| |||||| ||  ||||||||| |    
T  1820405 ctttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatat-ttttttacatct 1820503  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaa-aaaactatactccaaattcttatgttttagtttttttaataag 179  Q
    ||| |||||| |    | ||| ||| ||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  1820504 tcctataaaact----ttttccaaaaaaagcacaataaaactatattccaaattcttatgttttagttttcttaataag 1820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 47014660 - 47014487
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||| |||| || ||| ||||||| |||||| |||||||||| |||||||||| ||    
T  47014660 tttgtttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatttt 47014562  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    || |||||| |    | ||  ||  ||||||||||||||  ||||||| ||||||||||||||||||  ||| ||||||||    
T  47014561 cctataaaact----tttttcaacgaaaacacaaaaaac--tactccagattcttatgttttagtttacttagtaagtgtg 47014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 25391675 - 25391824
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | | |||||||| ||||||||||  | |||||||||||||| |||||||||| ||    
T  25391675 tttgtttattctcataaaattaaatgcaaattacattcaatttt-tatctcttccac-ttctccataactattagccaatgaaaattgtttttacatttt 25391772  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttat 159  Q
    |  |||||| |    || |||||| ||||||||||||| |||||| |||||||||||    
T  25391773 catataaaact----ta-tctaaagaaaacacaaaaaattatacttcaaattcttat 25391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 23392335 - 23392251
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaat 88  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||| ||||||||||    
T  23392335 tttgtttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaat 23392251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 32742342 - 32742192
Alignment:
Q  33 ttacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaac 132  Q
    ||||||| |||||||||| |||| || ||| ||||||||||||    ||||||||| ||||||| || ||   |||||| |    | || |||| |||||    
T  32742342 ttacatttaattttctctttctttcattttttccataatcaatgattaatgaaaattgtttttatatttttttataaaact----ttttttaaagaaaac 32742247  T
Q  133 acaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  32742246 acaaaaaactatactcaaaattcttatgctttagtttttttaataagtgtgattt 32742192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 7876091 - 7875930
Alignment:
Q  24 aaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattct 123  Q
    ||||||||||||||||||||||||||| ||||  | ||| ||||||| |||||| |||| |||||  ||||||||| || | ||||||| |    ||||     
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaa-aaaaaattc- 7875994  T
Q  124 aaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||| |||||||||||||||||| | |||||| |||| ||||| |||| ||||||||||||||||    
T  7875993 aaagaaaacacaaaaaactataattcaaatttttatattttaattttcttaataagtgtgattt 7875930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 1034849 - 1035028
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| | | || || | ||||||  ||| |||||| | |||||||| ||||||| || ||    
T  1034849 tttgtttattctcatgaaattaaatgcgaattacattcaatttttt-tctcatctattttctctgtaaccaatagtcgatgaaaattgtttttatatctt 1034947  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    | ||||||| |    ||||| ||| ||||||||||| |  |||| |||||||||||||||||| |||| ||||||| ||||||||||    
T  1034948 ctcataaaact----tattccaaagaaaacacaaaaca--atacgccaaattcttatgttttaattttcttaataaatgtgatttga 1035028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 3861847 - 3861702
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    ||||||||||||||||| ||| |||||| |||  ||| || ||| | ||||||||||||||||||||||| |||||||||| || | |||||| |    |    
T  3861847 aaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaataaaact----t 3861754  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttt 170  Q
    |||||||| |||||| |||||| |||||| |||||| |||||||||||||||    
T  3861753 attctaaagaaaacataaaaaattatacttcaaattattatgttttagtttt 3861702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 16854147 - 16854239
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||||||||||||||||||| |||||| ||| |||| || ||||||||||| ||||||||||| ||||| |||||||||  |||| ||||||    
T  16854147 aaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaaa 16854239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 30221773 - 30221898
Alignment:
Q  60 tttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttat 159  Q
    ||||||||||| ||||| ||||| ||||  |||||||||| ||||||||||| |    |||| |||| ||||||||||||| |||| ||||| |||||||    
T  30221773 tttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaact----tattttaaagaaaacacaaaaaattatattccaagttcttat 30221868  T
Q  160 gttttagtttttttaataagtgtgatttga 189  Q
    |||||| |||| ||||| ||||||| ||||    
T  30221869 gttttaattttcttaattagtgtgaattga 30221898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 43765301 - 43765438
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||| |||||||||| |||||||||||| | ||||||| ||||| |||||  |||| ||||||||||  |||||||||| |||| |||||| |    |    
T  43765301 aaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctataaaact----t 43765396  T
Q  119 attctaaataaaacac-aaaaaactatactccaaattcttat 159  Q
    |||||||| ||||||| ||||||||||||| |||||| ||||    
T  43765397 attctaaagaaaacacaaaaaaactatactacaaatttttat 43765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 7397713 - 7397877
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||| |||||||||| |||| ||||||    | |    
T  7397713 aaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaa----ttt 7397808  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | |||||||||||||||  | |||| |  ||| |||||||||||||||||||||||||||    
T  7397809 atttcaaagataacacaaaaaactatgttacaaactactatattttagtttttttaataagtgtgattt 7397877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 182
Target Start/End: Complemental strand, 46818668 - 46818497
Alignment:
Q  8 tttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    |||||||||||||| |||||| |||||||| |||| ||||||||   || || |||||||||||  | |||||||||||||| ||||||| || |||| |    
T  46818668 tttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttccta 46818569  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgt 182  Q
    ||||| |    | ||  ||| |||| |||||||||||||||  |||||||||||||||  |||| |||||||||||    
T  46818568 taaaact----tttttcaaagaaaatacaaaaaactatactttaaattcttatgtttttcttttcttaataagtgt 46818497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 4672943 - 4672998
Alignment:
Q  128 aaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtg 183  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  4672943 aaaatacaaaaaactatactccaaattcttatattttagttttcttaataagtgtg 4672998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 5858525 - 5858433
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| |||| ||||||||||||||||| ||||||| || |||| ||||||    
T  5858525 aaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaa 5858433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 50012690 - 50012750
Alignment:
Q  128 aaaacacaaaaaactatactccaaattcttatgtttt-agtttttttaataagtgtgattt 187  Q
    |||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||||    
T  50012690 aaaacacaaaaaactatactccaaattcctatattttaattttttttaataagtgtgattt 50012750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 47303076 - 47302896
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttct-ctatcttccactttctccataatcaatagccaatgaaaatggtttttacatat 101  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||  | | || || ||||| |||||||||||||||||||||||   |||||||| |    
T  47303076 tttgcttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaat-tattttacatct 47302978  T
Q  102 tcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||| || ||| |    |||||  || |||||||  |||| |||||||||| ||||||| |||||||||| |||| || ||| ||||||    
T  47302977 tcctatgaaact----tattcctaaaaaaacac--aaaattatactccaatttcttatattttagttttcttaacaaatgttatttga 47302896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 7190770 - 7190824
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 184  Q
    ||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||    
T  7190770 aacacaagaaactatactctaaattatcatgttttagtttttttaataagtgtga 7190824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 6787139 - 6787052
Alignment:
Q  23 taaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||| |||||||||||| |||| |||| || ||| ||||||| ||||||||||| |||||  ||||||||| |||| ||||||    
T  6787139 taaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctataaaa 6787052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 189
Target Start/End: Complemental strand, 32318673 - 32318548
Alignment:
Q  60 tttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttat 159  Q
    ||||||||||| ||||| ||||||||||| |||||||||| |||| |||||| |  |   ||  ||| |||| | |||||| ||||||||||||| ||||    
T  32318673 tttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttat---ttaaaaacaaaaaagaaaaaattatactccaaatttttat 32318577  T
Q  160 gttttagtttttttaataagtgtgatttga 189  Q
     |||||  ||||||||||| ||||||||||    
T  32318576 atttta-attttttaataattgtgatttga 32318548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 45840219 - 45840056
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| | || || ||| || ||||||||   ||||||||||| |||||| ||| |||| ||||||      |    
T  45840219 aaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaaca----t 45840125  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | |||||||||||||||  | |||| | ||||||||||||||| ||||||||||||||||    
T  45840124 atttcaaaaataacacaaaaaactatgttacaaactattatgttttagttttcttaataagtgtgattt 45840056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 34102126 - 34102049
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttac 97  Q
    |||||||||||||| | ||| |||||| |||| |||| ||||||||| |||| ||||| ||||||||||| ||||||||    
T  34102126 aaattaaatgcaaagtgcat-caatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 50012582 - 50012627
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttct 48  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  50012582 tttgtttattcttataaaattaaatgcaaattacattcaattttct 50012627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 50370068 - 50370121
Alignment:
Q  134 caaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||||||| ||||| ||||||||||| ||||| |||||||||||| ||||||||    
T  50370068 caaaaaacaatacttcaaattcttatattttaatttttttaataaatgtgattt 50370121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 187
Target Start/End: Complemental strand, 30701524 - 30701375
Alignment:
Q  34 tacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgtattctaaataaaaca 133  Q
    |||||||||||| |||| | || || |||||| ||||||||   |||||||||||  |||| |||| |||| |||||| |    ||||  ||| | ||||    
T  30701524 tacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaact----tatttcaaagataaca 30701429  T
Q  134 caaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||||| |||  | |||| |  |||||||||||||||||||||||||||||||    
T  30701428 caaaaaattatgttacaaactactatgttttagtttttttaataagtgtgattt 30701375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 48566192 - 48566156
Alignment:
Q  4 tttgtttattctcataaattaaatgcaaattacattc 40  Q
    ||||||||||||||||||||||||| |||||||||||    
T  48566192 tttgtttattctcataaattaaatgtaaattacattc 48566156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 50369981 - 50370060
Alignment:
Q  31 aattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||||||||| |||| || ||| || |||| |||||||||||  |||| |||||||||| |||| ||||||    
T  50369981 aattacattcaattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatcttcctataaaa 50370060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 11241034 - 11241077
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaatttt 46  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  11241034 tttgtttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 16688143 - 16688307
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||| ||| | || | |||| || |||||| |||| ||| | ||||||||||| |||||||||| |||| |||||| |    |    
T  16688143 aaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaact----t 16688238  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | |||| ||||||||||  | |||| |  ||||||||| ||||| |||||||||||||||    
T  16688239 atttcaaaaataacataaaaaactatgttacaaactactatgttttaatttttctaataagtgtgattt 16688307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 5950446 - 5950538
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||| ||| | |||| ||||| |||| |||| || ||| || |||| ||||  ||||||||||| |||||||||| |||| ||||||    
T  5950446 aaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaa 5950538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 15912205 - 15912297
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| ||||   || || ||||||  ||||||| |  |||||||||| |||||||||| |||| ||||||    
T  15912205 aaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaa 15912297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 37538816 - 37538908
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||||| |||||| | |||||||||| |||  |||| || |||||| |||| ||| | ||||||||||| || ||||||| |||| ||||||    
T  37538816 aaattaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaa 37538908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 44510373 - 44510281
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| ||||   || || |||||| |||||||||   |||||||||| |||||||||  |||| ||||||    
T  44510373 aaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaa 44510281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 50665254 - 50665306
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatctt 55  Q
    |||| |||||||||| ||||||| ||||||||||||| |||||||||| ||||    
T  50665254 tttgcttattctcatgaaattaattgcaaattacatttaattttctctctctt 50665306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 11082410 - 11082235
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| | || ||    
T  11082410 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 11082311  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11082310 aaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgttattt 11082235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 21542414 - 21542589
Alignment:
Q  9 ttattctcataa-attaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||| || ||| ||||||| ||||||||||| ||||| |||||||||| |||| ||    
T  21542414 ttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 21542513  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| |    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21542514 aaaact----ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 21542589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 35129209 - 35129044
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggttt-ttacatattcccataaaaatagtg 117  Q
    |||||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||| ||||||||||| |||| |||||| |||| |||||| |        
T  35129209 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaact---- 35129114  T
Q  118 tattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    | ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35129113 ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 35129044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 7275045 - 7274865
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| ||||||||| ||||||||||| |||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||    
T  7275045 tttgcttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 7274946  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||| ||| |    ||||| ||| |||| |||||||||||| || |||||||||||||||||||||| ||||||||||||||||    
T  7274945 cccatgaaact----tattccaaagaaaatacaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgattt 7274865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 17751914 - 17751732
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||| || ||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||  |  |||||||||| ||    
T  17751914 tttgtttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacatttt 17751815  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
        |||||| | | || |||||| |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  17751814 ---ttaaaaaaact-taatctaaagaaaacacaaaaaactatactccaaattcttatattttaattttcttaataagtgtgatttga 17751732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 3095884 - 3095710
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | || || ||| ||||||||||||||||||||||||| |||||||||| |||| ||    
T  3095884 ttattctcataaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 3095785  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||      | ||| ||| ||||||||||||||||||||||||||| ||||| ||||||||| ||||||| | ||||||    
T  3095784 aaaa-----cttttccaaagaaaacacaaaaaactatactccaaatttttatgctttagttttcttaataaatatgattt 3095710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 34177806 - 34177631
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| | || ||    
T  34177806 ttattctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 34177707  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||    | | | ||| ||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  34177706 aa----atttttttccaaagaaaacacaaaaaactatattccaaattcttatgttttaattttcttaataagtgtgattt 34177631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 30794358 - 30794180
Alignment:
Q  8 tttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||| ||||| | ||||||||| | ||||||||||||||||  |||||||||| |||| |    
T  30794358 tttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttccta 30794259  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||| |    ||||| |||||||||| |||||| |||||| ||||||||||| |||||||||| ||||||| | ||||||||    
T  30794258 taaaact----tattccaaataaaacataaaaaattatacttcaaattcttatattttagttttcttaataaatctgatttga 30794180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 12461599 - 12461417
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| | ||||| | ||||||||||| ||||||||||||||||| |||||||||| ||    
T  12461599 tttgtttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctt 12461500  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
     | |||||||     ||||  ||| |||| | ||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||    
T  12461499 tctataaaaa---cttatttcaaagaaaata-aaaaaactatattccaaattctcatgttttagttttcttaataaatgtgatttga 12461417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 9428852 - 9428916
Alignment:
Q  123 taaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||||||    
T  9428852 taaaaaaaacacaaaaaattatacttcaaattcttatgttttagttttattaataaatgtgattt 9428916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 4031992 - 4032159
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||| |||||||||| |||| |||||| |    |    
T  4031992 aaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaact----t 4032087  T
Q  119 attctaaataaaacacaaaaaactatactccaaa-ttct--tatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||| | |||||||||||||||  | |||| | ||  |||||||||||||| ||||||||||||||||    
T  4032088 atttcaaagataacacaaaaaactatgttacaaactactactatgttttagttttcttaataagtgtgattt 4032159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 31107182 - 31107277
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacat 99  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||| | |||| || ||| || ||||||||||| |||| |||||  |||||||||    
T  31107182 tttgtttattcttataaaattaaatgcaaattacattcaa-tttctttctctttcattttttctataatcaatagtcaataaaaatcatttttacat 31107277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 9428761 - 9428844
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaa 86  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||||| ||||  | ||| || |||| |||||||||||||||    
T  9428761 tttgtttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 14573282 - 14573116
Alignment:
Q  19 aaattaaatgcaaattacattcaattttct-ctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtg 117  Q
    |||||||||  |||||| ||| |||||| | || ||| ||| ||||||||||||||| |  ||||||||||  |||||||||  |||||||| | |        
T  14573282 aaattaaatttaaattatattaaatttttttctctctaccattttctccataatcaacaaacaatgaaaattatttttacatcatcccataatact---- 14573187  T
Q  118 tattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||  ||| |||| |||||||  |||||||||||||| ||| |||||||||| ||||||| ||||||||||    
T  14573186 tatttcaaagaaaatacaaaaat-tatactccaaattcatatattttagttttcttaataaatgtgatttga 14573116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 5300658 - 5300601
Alignment:
Q  130 aacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    ||||||| |||| ||| | |||| || |||||||||||||||||||||||||||||||    
T  5300658 aacacaagaaacaatattacaaactcctatgttttagtttttttaataagtgtgattt 5300601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 16013583 - 16013494
Alignment:
Q  22 ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    ||||||| ||| | |||||||||| |||| | || || |||||| ||||||||   ||||||||||| |||||||||| |||| ||||||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaa 16013494  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 4987948 - 4988040
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | |||||||||| ||||   || || |||||| ||||||||   |||||||||||  ||||||||| |||| ||||||    
T  4987948 aaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaa 4988040  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 16524385 - 16524476
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaa 111  Q
    |||||||||||||| | ||||||||||  ||| | ||| | |||||| ||||||||   ||||||||||| |||||||||| |||| ||||||    
T  16524385 aaattaaatgcaaagtgcattcaatttgttctcttttc-attttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaa 16524476  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 16870812 - 16870784
Alignment:
Q  157 tatgttttagtttttttaataagtgtgat 185  Q
    |||||||||||||||||||||||||||||    
T  16870812 tatgttttagtttttttaataagtgtgat 16870784  T

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Target: scaffold0442 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 10036 - 10216
Alignment:
Q  4 tttgtttattctcata-aattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||| || ||| ||||||| |||||| |||||||||| |||||||||| ||    
T  10036 tttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatctt 10135  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||||||| |||||||||||||||| | ||||||||||||||||||| |||| ||||||||| ||||||    
T  10136 cctataaaact----ttttctaaagaaaacacaaaaaactacattccaaattcttatgttttaattttcttaataagtatgattt 10216  T

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Target: scaffold0300 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 738 - 565
Alignment:
Q  9 ttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| | || ||    
T  738 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 639  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgat 185  Q
    |||| |    | ||  ||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  638 aaaact----tttttcaaagaaaacacataaaactatactccaaattcttatgttttagttttcttaataagtgtgat 565  T

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Target: scaffold0045 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 77948 - 78128
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| || |||| || ||| ||||||| |||| |||||||||||| |||||||||| ||    
T  77948 tttgtttattctcataaaattaaatgtaaattacattcaattttcactttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 78047  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || ||| || |    | ||  ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  78048 cctatacaact----tttttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgattt 78128  T

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Target: scaffold0062 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 44941 - 44761
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||| || |||| || ||| ||||||| ||||||||||||||||| ||||||  |||||    
T  44941 tttgtttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatatt 44842  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    || |||||| |    | ||| ||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  44841 cctataaaact----ttttccaaagaaaacacaaaaaaatatactccaaattattatgttttagttttcttaataaatgtgattt 44761  T

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Target: scaffold0774 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 3597 - 3447
Alignment:
Q  5 ttgtttattctcata-aattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattc 103  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| || ||| ||||||| |||||||||||||||||  ||||||||| |||    
T  3597 ttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttc 3498  T
Q  104 ccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattctta 158  Q
    | |||||| |    | ||| ||| |||||||||||||||||||||||||||||||    
T  3497 ctataaaact----ttttcaaaagaaaacacaaaaaactatactccaaattctta 3447  T

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Target: scaffold0009 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 157790 - 157965
Alignment:
Q  9 ttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||  | ||| ||||||| |||| |||||||||||| |||||||||| | |||||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccat 157889  T
Q  108 aaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     ||| |    ||||| ||| ||||||||||||||||| || |||||||||||| ||||||||| ||||||||| ||||||    
T  157890 gaaact----tattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtatgattt 157965  T

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Target: scaffold0009; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 52756 - 52668
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    ||||||||||| ||||||||| |||||||||| ||||| | |||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  52756 aaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacatatttccat 52668  T

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Target: scaffold0132 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 1003 - 1183
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||  |||| || ||| ||||||| |||||  |||||||||  |||||||||| ||    
T  1003 tttgtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctt 1102  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | |||||| |  | ||    ||| ||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  1103 tctataaaactttttta----aaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtgattt 1183  T

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Target: scaffold0132; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 8963 - 9143
Alignment:
Q  4 tttgtttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||  |||| || ||| ||||||| |||||  |||||||||  |||||||||| ||    
T  8963 tttgtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctt 9062  T
Q  103 cccataaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
     | |||||| |  | ||    ||| ||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  9063 tctataaaactttttta----aaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtgattt 9143  T

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Target: scaffold0018 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 154856 - 155022
Alignment:
Q  8 tttattctcataaa-ttaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||| || ||| ||||||| |||||||||||| |||| |||||||||| || | |    
T  154856 tttattctcataaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatctttcta 154955  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataa 178  Q
    ||||| |    | ||  ||| |||| || |||||||||| | || ||||||||||||||||||| |||||||    
T  154956 taaaact----tttttcaaagaaaatac-aaaaactatatttcagattcttatgttttagttttcttaataa 155022  T

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Target: scaffold0005 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 233657 - 233475
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatatt 102  Q
    |||| |||||||||| |||||||||||||||||||||||||| || || ||||||| |||||   ||||| ||||||||||||||| |||||||||| ||    
T  233657 tttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaat-gtttttacatctt 233559  T
Q  103 cccataaaaatagtgtattctaaa-taaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgatttga 189  Q
    ||||| ||| |    |||| ||||  |||||||||| |||||||    |||||||||| |||||||||| ||||||| ||||||||||    
T  233558 cccatgaaact----tattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtgatttga 233475  T

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Target: scaffold0111 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 40174 - 40321
Alignment:
Q  8 tttattctcat-aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattccca 106  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| || |||| ||| || |||| ||||||||||||||||| |||||||||  || | |    
T  40174 tttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttcta 40273  T
Q  107 taaaaatagtgtattctaaataaaacacaaaaaactatactccaaattcttat 159  Q
    |||||    | ||||| ||| |||||||||||| ||||||| |||||||||||    
T  40274 taaaa----tttattccaaagaaaacacaaaaagctatact-caaattcttat 40321  T

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Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 160257 - 160345
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccat 107  Q
    |||||||||  ||||||||||||||||||||| ||||||| |||  |||||| ||||||||||||||||  | |||||||| |||||||    
T  160257 aaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcccat 160345  T

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Target: scaffold0565 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 6029 - 5865
Alignment:
Q  19 aaattaaatgcaaattacattcaattttctctatcttccactttctccataatcaatagccaatgaaaatggtttttacatattcccataaaaatagtgt 118  Q
    |||||||||||||| | |||||||||| |||| | || || ||| || ||||||||    ||| |||||| |||||||||| |||| |||||| |    |    
T  6029 aaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaact----t 5934  T
Q  119 attctaaataaaacacaaaaaactatactccaaattcttatgttttagtttttttaataagtgtgattt 187  Q
    |||  ||  | |||||||||||||||| | |||| |  ||||||||| |||| ||||||||||||||||    
T  5933 atttcaatgataacacaaaaaactatattacaaactactatgttttaattttcttaataagtgtgattt 5865  T

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Target: scaffold1786 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 855 - 900
Alignment:
Q  4 tttgtttattctcat-aaattaaatgcaaattacattcaattttctc 49  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  855 tttgtttattctcatgaaattaaatgcaaattacatt-aattttctc 900  T

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Target: scaffold1786; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 959 - 997
Alignment:
Q  137 aaaactatactccaaattcttatgttttagtttttttaa 175  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  959 aaaactatacttcaaattcttatgttttaatttttttaa 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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