View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5413_low_45 (Length: 273)
Name: NF5413_low_45
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5413_low_45 |
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Alignment Details
Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 13 - 256
Target Start/End: Complemental strand, 9250738 - 9250495
Alignment:
| Q |
13 |
ttctagatcaaaaatatcatacaactcatcactgattccaatttccaaatatttcacttggaaagtaaggtatcatactttatagtctttcaaatttcaa |
112 |
Q |
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| T |
9250738 |
ttctagatcaaaaatatcatacaactgatcactgattccaatttccaaatatttcacttggaaagtaaggtatcatactttatagtctttcaaatttcaa |
9250639 |
T |
|
| Q |
113 |
tgcatcagtaacaattagtagtaacaaatatagtgataagtgatgtagtcaaacaagagagtaccaatcatacacagaaatctgactcctaagcatgtat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9250638 |
tgcatcagtaacaattagtagtaacaaatatagtgataagtgatgtagtcaaacaagagagtaccaatcatacacagaaatctgactcctaagcatgtat |
9250539 |
T |
|
| Q |
213 |
atgtgtcatgtgtgatgggtacacgtatctaatacccttaaaac |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9250538 |
atgtgtcatgtgtgatgggtacacgtatctaatacccttaaaac |
9250495 |
T |
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