View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5413_low_46 (Length: 270)

Name: NF5413_low_46
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5413_low_46
NF5413_low_46
[»] chr6 (32 HSPs)
chr6 (1-83)||(6536936-6537018)
chr6 (1-44)||(4420671-4420714)
chr6 (1-44)||(27909637-27909680)
chr6 (1-46)||(9027604-9027649)
chr6 (1-45)||(34403882-34403926)
chr6 (1-48)||(821449-821496)
chr6 (1-44)||(7785743-7785786)
chr6 (1-44)||(7931725-7931768)
chr6 (12-47)||(20512654-20512689)
chr6 (1-47)||(13908488-13908534)
chr6 (1-47)||(30863271-30863317)
chr6 (1-42)||(31583709-31583750)
chr6 (2-61)||(8473574-8473633)
chr6 (4-44)||(17241254-17241294)
chr6 (1-41)||(33887861-33887901)
chr6 (1-44)||(281847-281890)
chr6 (1-44)||(2167157-2167200)
chr6 (1-44)||(2178790-2178833)
chr6 (1-44)||(6647415-6647458)
chr6 (13-44)||(7931800-7931831)
chr6 (1-44)||(9667984-9668027)
chr6 (4-51)||(28641751-28641798)
chr6 (13-48)||(34939537-34939572)
chr6 (1-44)||(34939772-34939815)
chr6 (1-38)||(821833-821870)
chr6 (1-42)||(29296294-29296335)
chr6 (9-42)||(31420975-31421008)
chr6 (12-44)||(1408277-1408309)
chr6 (1-41)||(2112231-2112271)
chr6 (3-39)||(2160938-2160974)
chr6 (12-40)||(3217200-3217228)
chr6 (1-45)||(30523964-30524008)
[»] chr3 (41 HSPs)
chr3 (1-44)||(45432938-45432981)
chr3 (1-42)||(42745068-42745109)
chr3 (4-44)||(21862177-21862217)
chr3 (12-47)||(13371142-13371177)
chr3 (1-44)||(24785233-24785276)
chr3 (1-40)||(33883749-33883788)
chr3 (1-48)||(36101592-36101639)
chr3 (1-44)||(36200124-36200167)
chr3 (1-44)||(37825150-37825193)
chr3 (1-44)||(43115084-43115127)
chr3 (1-47)||(36139903-36139949)
chr3 (1-42)||(11039338-11039379)
chr3 (2-47)||(36887529-36887574)
chr3 (12-44)||(5292530-5292562)
chr3 (1-44)||(3044258-3044301)
chr3 (1-44)||(20669200-20669243)
chr3 (1-44)||(21574518-21574561)
chr3 (1-44)||(25925770-25925813)
chr3 (3-42)||(29771868-29771907)
chr3 (1-44)||(31010430-31010473)
chr3 (1-40)||(37273166-37273205)
chr3 (11-42)||(38462311-38462342)
chr3 (1-44)||(40665457-40665500)
chr3 (1-44)||(50952361-50952404)
chr3 (1-44)||(52412903-52412946)
chr3 (1-51)||(14548720-14548770)
chr3 (1-39)||(48048981-48049019)
chr3 (1-47)||(52440661-52440707)
chr3 (11-44)||(23785283-23785316)
chr3 (1-42)||(34954112-34954153)
chr3 (1-42)||(50004682-50004723)
chr3 (4-44)||(2318673-2318713)
chr3 (1-45)||(5166350-5166394)
chr3 (1-33)||(12923324-12923356)
chr3 (2-42)||(26330323-26330363)
chr3 (12-44)||(27792900-27792932)
chr3 (1-41)||(36445856-36445896)
chr3 (1-33)||(41724251-41724283)
chr3 (1-29)||(44747173-44747201)
chr3 (4-48)||(53736122-53736166)
chr3 (82-110)||(55113570-55113598)
[»] chr5 (40 HSPs)
chr5 (1-63)||(17258882-17258946)
chr5 (1-47)||(12521553-12521599)
chr5 (1-47)||(35963266-35963312)
chr5 (1-50)||(37526198-37526247)
chr5 (1-44)||(19138716-19138759)
chr5 (1-44)||(33533538-33533581)
chr5 (1-44)||(36638775-36638818)
chr5 (1-44)||(37690635-37690678)
chr5 (1-39)||(1899187-1899225)
chr5 (1-51)||(2880546-2880596)
chr5 (12-63)||(5951978-5952031)
chr5 (5-43)||(11615530-11615568)
chr5 (1-51)||(37588359-37588409)
chr5 (2-44)||(37611215-37611257)
chr5 (2-44)||(37787945-37787987)
chr5 (6-47)||(1084125-1084166)
chr5 (2-34)||(16457613-16457645)
chr5 (12-44)||(38104867-38104899)
chr5 (1-44)||(499730-499773)
chr5 (1-44)||(6109511-6109554)
chr5 (4-43)||(8651355-8651394)
chr5 (1-44)||(10125717-10125760)
chr5 (1-44)||(11707083-11707126)
chr5 (3-42)||(15074750-15074789)
chr5 (12-47)||(20028500-20028535)
chr5 (1-48)||(32408591-32408638)
chr5 (12-47)||(39607511-39607546)
chr5 (1-51)||(3504765-3504815)
chr5 (1-47)||(13604848-13604894)
chr5 (6-44)||(19460595-19460633)
chr5 (6-44)||(28413288-28413326)
chr5 (9-42)||(9106851-9106884)
chr5 (1-42)||(10303826-10303867)
chr5 (1-42)||(12467163-12467204)
chr5 (12-45)||(18704046-18704079)
chr5 (81-117)||(8089698-8089734)
chr5 (1-45)||(17369438-17369482)
chr5 (11-47)||(18906367-18906403)
chr5 (1-42)||(30653373-30653416)
chr5 (12-44)||(40590786-40590818)
[»] chr1 (68 HSPs)
chr1 (8-48)||(48748321-48748361)
chr1 (1-44)||(10199407-10199450)
chr1 (1-47)||(37593683-37593729)
chr1 (1-44)||(6292521-6292564)
chr1 (1-44)||(25479609-25479652)
chr1 (1-44)||(27140506-27140549)
chr1 (1-48)||(28935875-28935922)
chr1 (1-40)||(31118075-31118114)
chr1 (1-44)||(31517739-31517782)
chr1 (1-44)||(46252681-46252724)
chr1 (2-48)||(7262518-7262564)
chr1 (1-39)||(14629965-14630003)
chr1 (6-44)||(15361068-15361106)
chr1 (6-44)||(28077073-28077111)
chr1 (1-47)||(29007715-29007761)
chr1 (1-47)||(34290261-34290307)
chr1 (1-47)||(38170689-38170735)
chr1 (10-48)||(43954053-43954091)
chr1 (7-48)||(219556-219597)
chr1 (1-42)||(4549260-4549301)
chr1 (1-38)||(12477286-12477323)
chr1 (1-42)||(28689451-28689492)
chr1 (1-63)||(30257690-30257754)
chr1 (6-47)||(32182296-32182337)
chr1 (1-42)||(33723381-33723422)
chr1 (5-42)||(39347970-39348007)
chr1 (1-42)||(47877139-47877180)
chr1 (3-47)||(5047171-5047215)
chr1 (1-33)||(5886993-5887025)
chr1 (4-44)||(6279427-6279467)
chr1 (11-47)||(11893602-11893638)
chr1 (11-47)||(16322874-16322910)
chr1 (11-51)||(26916222-26916262)
chr1 (4-44)||(32859948-32859988)
chr1 (8-44)||(35590898-35590934)
chr1 (8-40)||(47885039-47885071)
chr1 (12-51)||(625593-625632)
chr1 (1-48)||(3924648-3924695)
chr1 (1-32)||(4549888-4549919)
chr1 (1-44)||(4699614-4699657)
chr1 (1-48)||(6932960-6933007)
chr1 (1-44)||(8016285-8016328)
chr1 (5-44)||(23902070-23902109)
chr1 (1-44)||(26184776-26184819)
chr1 (1-44)||(30371176-30371219)
chr1 (1-44)||(35017604-35017647)
chr1 (1-44)||(35925718-35925761)
chr1 (5-47)||(42397749-42397792)
chr1 (1-43)||(3223697-3223738)
chr1 (6-44)||(6659542-6659580)
chr1 (1-39)||(15579515-15579553)
chr1 (1-47)||(30815652-30815698)
chr1 (1-47)||(44031998-44032044)
chr1 (8-37)||(4025119-4025148)
chr1 (11-44)||(33108631-33108664)
chr1 (1-34)||(34278692-34278725)
chr1 (3-44)||(38266461-38266502)
chr1 (7-40)||(38503470-38503503)
chr1 (1-34)||(47917274-47917307)
chr1 (3-39)||(4768830-4768866)
chr1 (7-39)||(6102187-6102219)
chr1 (12-40)||(12564509-12564537)
chr1 (4-40)||(15558249-15558285)
chr1 (16-44)||(23402059-23402087)
chr1 (1-33)||(29635386-29635418)
chr1 (12-44)||(33722411-33722443)
chr1 (12-44)||(44815313-44815345)
chr1 (12-44)||(49125872-49125904)
[»] chr8 (36 HSPs)
chr8 (1-48)||(11000575-11000622)
chr8 (1-44)||(41606902-41606945)
chr8 (1-45)||(6950349-6950393)
chr8 (4-44)||(42215084-42215124)
chr8 (1-44)||(20672778-20672821)
chr8 (1-44)||(25869265-25869308)
chr8 (1-40)||(30389131-30389170)
chr8 (9-44)||(30918141-30918176)
chr8 (1-42)||(13000423-13000464)
chr8 (1-45)||(2235655-2235699)
chr8 (8-44)||(8060697-8060733)
chr8 (4-44)||(11185249-11185289)
chr8 (5-44)||(2458569-2458608)
chr8 (1-32)||(2594996-2595027)
chr8 (1-40)||(9835899-9835938)
chr8 (1-44)||(10383913-10383956)
chr8 (1-44)||(11795120-11795163)
chr8 (1-44)||(28769338-28769381)
chr8 (1-44)||(42215305-42215348)
chr8 (1-39)||(4281579-4281617)
chr8 (1-39)||(30191140-30191178)
chr8 (1-42)||(926505-926546)
chr8 (1-34)||(3254263-3254296)
chr8 (7-40)||(3536950-3536983)
chr8 (1-61)||(5231811-5231872)
chr8 (11-44)||(30277254-30277287)
chr8 (1-42)||(43704375-43704416)
chr8 (3-40)||(44401593-44401630)
chr8 (1-33)||(779060-779092)
chr8 (1-41)||(3600737-3600777)
chr8 (15-47)||(7039835-7039867)
chr8 (12-44)||(11183573-11183605)
chr8 (1-33)||(11569456-11569488)
chr8 (4-44)||(12851204-12851244)
chr8 (1-41)||(14339604-14339644)
chr8 (1-45)||(14949893-14949937)
[»] chr4 (39 HSPs)
chr4 (1-44)||(1137740-1137783)
chr4 (1-44)||(7694009-7694052)
chr4 (1-38)||(8469376-8469413)
chr4 (5-42)||(43824313-43824350)
chr4 (5-44)||(24929521-24929560)
chr4 (1-44)||(29263398-29263441)
chr4 (6-44)||(5131254-5131292)
chr4 (1-47)||(23819114-23819160)
chr4 (1-47)||(28300298-28300344)
chr4 (1-38)||(24747353-24747390)
chr4 (3-44)||(45732701-45732742)
chr4 (6-47)||(47145987-47146028)
chr4 (1-42)||(49486490-49486531)
chr4 (13-44)||(2592320-2592351)
chr4 (1-44)||(29467623-29467666)
chr4 (1-47)||(6428043-6428089)
chr4 (6-44)||(17884096-17884134)
chr4 (14-44)||(18628555-18628585)
chr4 (1-51)||(20105430-20105479)
chr4 (2-44)||(33534169-33534211)
chr4 (6-44)||(35405975-35406013)
chr4 (1-47)||(35743307-35743353)
chr4 (1-51)||(43932456-43932506)
chr4 (10-44)||(45738105-45738139)
chr4 (10-44)||(46110231-46110265)
chr4 (11-45)||(49219166-49219200)
chr4 (6-44)||(53673662-53673700)
chr4 (11-44)||(19429737-19429770)
chr4 (10-47)||(37575944-37575981)
chr4 (1-42)||(42461281-42461322)
chr4 (1-46)||(46019628-46019673)
chr4 (1-34)||(46201386-46201419)
chr4 (1-61)||(50569328-50569389)
chr4 (1-37)||(17223035-17223071)
chr4 (1-37)||(19304961-19304997)
chr4 (4-36)||(30631502-30631534)
chr4 (4-44)||(35064883-35064923)
chr4 (1-33)||(46401303-46401335)
chr4 (4-44)||(55084483-55084523)
[»] chr2 (44 HSPs)
chr2 (1-42)||(41809244-41809285)
chr2 (1-44)||(1647264-1647307)
chr2 (1-44)||(16867767-16867810)
chr2 (1-44)||(28677658-28677701)
chr2 (1-40)||(29316774-29316813)
chr2 (1-44)||(35379015-35379058)
chr2 (1-44)||(41817196-41817239)
chr2 (1-47)||(7871668-7871714)
chr2 (2-44)||(8820292-8820334)
chr2 (1-51)||(40158739-40158789)
chr2 (5-51)||(42817379-42817425)
chr2 (1-44)||(1056128-1056171)
chr2 (1-48)||(1160670-1160717)
chr2 (1-44)||(1939331-1939374)
chr2 (1-44)||(5781697-5781740)
chr2 (1-44)||(10198479-10198522)
chr2 (13-48)||(11063217-11063252)
chr2 (1-44)||(31739971-31740014)
chr2 (1-44)||(34652035-34652078)
chr2 (1-48)||(35485941-35485988)
chr2 (1-51)||(38388707-38388758)
chr2 (1-44)||(43065449-43065492)
chr2 (1-32)||(43910998-43911029)
chr2 (1-44)||(44443349-44443392)
chr2 (1-51)||(10567078-10567128)
chr2 (1-51)||(12147478-12147528)
chr2 (2-44)||(19333325-19333367)
chr2 (1-39)||(28039331-28039369)
chr2 (3-44)||(1160741-1160782)
chr2 (7-40)||(7928304-7928337)
chr2 (1-42)||(11063518-11063559)
chr2 (1-42)||(16551839-16551880)
chr2 (11-44)||(25796209-25796242)
chr2 (1-42)||(35378531-35378572)
chr2 (5-42)||(42420027-42420064)
chr2 (3-39)||(3235385-3235421)
chr2 (7-51)||(9395151-9395195)
chr2 (1-41)||(14666579-14666619)
chr2 (12-44)||(18840824-18840856)
chr2 (4-40)||(22681187-22681223)
chr2 (7-39)||(29628748-29628780)
chr2 (1-33)||(30538172-30538204)
chr2 (12-44)||(41032965-41032997)
chr2 (3-43)||(43717137-43717177)
[»] chr7 (37 HSPs)
chr7 (3-43)||(20553132-20553172)
chr7 (1-48)||(4966180-4966227)
chr7 (1-44)||(7244708-7244751)
chr7 (1-44)||(9423593-9423636)
chr7 (1-44)||(35267390-35267433)
chr7 (2-44)||(24363601-24363643)
chr7 (9-51)||(26935564-26935606)
chr7 (1-47)||(29286816-29286862)
chr7 (1-47)||(44151479-44151525)
chr7 (1-47)||(45859526-45859571)
chr7 (1-51)||(46082057-46082107)
chr7 (1-44)||(12234888-12234931)
chr7 (5-36)||(20888397-20888428)
chr7 (1-44)||(22551404-22551447)
chr7 (1-44)||(27496406-27496449)
chr7 (1-44)||(27503064-27503107)
chr7 (1-40)||(39345503-39345542)
chr7 (6-40)||(2825235-2825269)
chr7 (1-39)||(33894660-33894698)
chr7 (1-43)||(39334222-39334264)
chr7 (18-51)||(12792709-12792742)
chr7 (3-40)||(18749818-18749855)
chr7 (1-42)||(25511656-25511697)
chr7 (7-44)||(28165119-28165156)
chr7 (4-33)||(35007636-35007665)
chr7 (1-34)||(36598355-36598388)
chr7 (1-42)||(39551547-39551588)
chr7 (81-110)||(44777117-44777146)
chr7 (1-42)||(47134756-47134797)
chr7 (1-33)||(21247965-21247997)
chr7 (10-63)||(27378836-27378891)
chr7 (1-49)||(33645960-33646008)
chr7 (1-33)||(33871288-33871320)
chr7 (12-44)||(34754820-34754852)
chr7 (4-40)||(38010746-38010782)
chr7 (6-38)||(39281003-39281035)
chr7 (4-44)||(47395100-47395140)
[»] scaffold0089 (1 HSPs)
scaffold0089 (12-47)||(33637-33672)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-39)||(10616-10654)
[»] scaffold0147 (2 HSPs)
scaffold0147 (4-44)||(4937-4977)
scaffold0147 (1-44)||(12703-12746)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-44)||(3501-3544)
[»] scaffold0159 (1 HSPs)
scaffold0159 (1-44)||(27029-27072)
[»] scaffold0153 (2 HSPs)
scaffold0153 (1-44)||(6493-6536)
scaffold0153 (1-44)||(13513-13556)
[»] scaffold0286 (1 HSPs)
scaffold0286 (3-39)||(16143-16179)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6537018 - 6536936
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaattttatgaaaacataacgaaagtaatttgactt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6537018 atgacatgttcataagttgttttcagcttatttccataagctcttcagaattttatgaaaacataacgaaagtaatttgactt 6536936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4420714 - 4420671
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
4420714 atgacatgttcataagctgttttcagcttatttccataagctct 4420671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27909637 - 27909680
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
27909637 atgacatgtccataagttgttttcagcttatttccataagctct 27909680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9027649 - 9027604
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttc 46  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
9027649 atgacatgtccataagttgttttcagcttattttcataagctcttc 9027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34403926 - 34403882
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctctt 45  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
34403926 atgacatgttcataaggtgttttcaccttatttccataagctctt 34403882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 821496 - 821449
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    ||||||||||||||||| |||||||||||||||| |||| ||||||||    
821496 atgacatgttcataagtcgttttcagcttatttctataacctcttcag 821449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7785743 - 7785786
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
7785743 atgacatgtctataagttgttttcagcttatttccataagctct 7785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7931725 - 7931768
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
7931725 atgacatgttcttaagttgttttcagcttatttccgtaagctct 7931768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 20512654 - 20512689
Alignment:
12 ataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||||||||||||||||    
20512654 ataagttgttttcagcttatttccataagctcttca 20512689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13908534 - 13908488
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||||    
13908534 atgacatgttcgtaagctgttttcagcttattttcataagctcttca 13908488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30863317 - 30863271
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||    
30863317 atgacatgtacataagttgttttcagcttacttctataagctcttca 30863271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31583750 - 31583709
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
31583750 atgacatgtccataagttgttttcaacttatttccataagct 31583709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 8473633 - 8473574
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctcttcaga-attttatgaaaa 61  Q
    |||||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||||||    
8473633 tgacatgttcataagttgtttt-agcttattttcaaaagctcttaagatattttatgaaaa 8473574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 17241254 - 17241294
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
17241254 acatgttcataagttgttttcaacttatttccataaactct 17241294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33887901 - 33887861
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagc 41  Q
    |||||||||||| |||||||||||| |||||||||||||||    
33887901 atgacatgttcacaagttgttttcaacttatttccataagc 33887861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 281847 - 281890
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||  |||||||||||||||||||||||||| ||||||    
281847 atgacatgtctataagttgttttcagcttatttccatgagctct 281890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2167157 - 2167200
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||    
2167157 atgatatgtccataagttgttttcagcttatttccataatctct 2167200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2178790 - 2178833
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||    
2178790 atgatatgtccataagttgttttcagcttatttccataatctct 2178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6647458 - 6647415
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||    
6647458 atgacatgttcataagatgttttcaacttattttcataagctct 6647415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 7931800 - 7931831
Alignment:
13 taagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||||||    
7931800 taagttgttttcagcttatttccataagctct 7931831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9667984 - 9668027
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||    
9667984 atgacatgtccataagctgttttcaacttatttccataagctct 9668027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 28641751 - 28641798
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||||||||| |||||| ||||||||| |||||||||| ||||||    
28641751 acatgttcataagctgtttttagcttattttcataagctctgcagaat 28641798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 34939572 - 34939537
Alignment:
13 taagttgttttcagcttatttccataagctcttcag 48  Q
    ||||||||||||||||||||||||||| ||||||||    
34939572 taagttgttttcagcttatttccataacctcttcag 34939537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34939815 - 34939772
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||    
34939815 atgacatgtccataaattgttttcagcttatttccataaactct 34939772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 821870 - 821833
Alignment:
1 atgacatgttcataagttgttttcagcttatttccata 38  Q
    |||||||||||||||| |||||||||||||||| ||||    
821870 atgacatgttcataagctgttttcagcttattttcata 821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29296294 - 29296335
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| |||||||| |||||||||||||| ||||||||    
29296294 atgacatgtccataagttattttcagcttattttcataagct 29296335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 31421008 - 31420975
Alignment:
9 ttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||||||||||||| ||||||||    
31421008 ttcataagttgttttcagcttattttcataagct 31420975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 1408277 - 1408309
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||| ||||||||||||||||||||||||||||    
1408277 ataacttgttttcagcttatttccataagctct 1408309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2112271 - 2112231
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagc 41  Q
    |||||||||||||||||||||||| | ||||||| ||||||    
2112271 atgacatgttcataagttgttttcggtttatttctataagc 2112231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 2160938 - 2160974
Alignment:
3 gacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||| ||||||||||||||| |||||||||||||    
2160938 gacatgtccataagttgttttcaacttatttccataa 2160974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 3217200 - 3217228
Alignment:
12 ataagttgttttcagcttatttccataag 40  Q
    |||||||||||||||||||||||||||||    
3217200 ataagttgttttcagcttatttccataag 3217228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30524008 - 30523964
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctctt 45  Q
    ||||||||| ||| ||||| ||| |||||||||||||||||||||    
30524008 atgacatgtccattagttgcttttagcttatttccataagctctt 30523964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45432938 - 45432981
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
45432938 atgacatgttcataagttgttttcagcttatttccataagctct 45432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42745109 - 42745068
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
42745109 atgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 21862177 - 21862217
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||| ||||||||||||||||||||||||||||||||||    
21862177 acatgtccataagttgttttcagcttatttccataagctct 21862217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 13371177 - 13371142
Alignment:
12 ataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||||||||||||||||    
13371177 ataagttgttttcagcttatttccataagctcttca 13371142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24785276 - 24785233
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
24785276 atgacatgttcataagttgtttttagcttatttacataagctct 24785233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33883749 - 33883788
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||||||||||||||||||||||| ||||||    
33883749 atgacatgttcataagttgttttcagcttattttcataag 33883788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36101639 - 36101592
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||    
36101639 atgacatgttcacaagctgttttcagcttattttcataagctcttcag 36101592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36200167 - 36200124
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||    
36200167 atgacatgtccataagttgttttcagcttatttccatgagctct 36200124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37825193 - 37825150
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
37825193 atgacatgtccataagttgttttcaggttatttccataagctct 37825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43115127 - 43115084
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
43115127 atgacatgtccataacttgttttcagcttatttccataagctct 43115084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36139949 - 36139903
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||    
36139949 atgacatgttcacaagctgttttcagcttattttcataagctcttca 36139903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11039338 - 11039379
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
11039338 atgacatgtccataagttgttttcagcttatctccataagct 11039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 36887574 - 36887529
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||    
36887574 tgacatgttcataagatgttttcagcttattttcataagttcttca 36887529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 5292530 - 5292562
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||||||||    
5292530 ataagttgttttcagcttatttccataagctct 5292562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3044258 - 3044301
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||    
3044258 atgacatgttcataagctgttttcaacttattttcataagctct 3044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20669243 - 20669200
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||    
20669243 atgacatgttcataagctgttttccgcttatttacataagctct 20669200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21574561 - 21574518
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| || ||| ||||||||||||||||||||    
21574561 atgacatgttcataagctgcttttagcttatttccataagctct 21574518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25925813 - 25925770
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||    
25925813 atgacatgttcataagctgttttcaacttattttcataagctct 25925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 29771907 - 29771868
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
29771907 gacatgtccataagttgttttcaacttatttccataagct 29771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31010473 - 31010430
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
31010473 atgacatgtccataagctgttttcagcttaattccataagctct 31010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37273205 - 37273166
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
37273205 atgacatgtccataagttgttttcaacttatttccataag 37273166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 42
Target Start/End: Complemental strand, 38462342 - 38462311
Alignment:
11 cataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||||||||||||||||||||    
38462342 cataagttgttttcagcttatttccataagct 38462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40665500 - 40665457
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| ||||||||||||||||  |||||||||    
40665500 atgacatgttcataagctgttttcagcttatttttataagctct 40665457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50952404 - 50952361
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||  |||||| ||||||||||||||||||||    
50952404 atgacatgttcataaactgttttaagcttatttccataagctct 50952361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52412903 - 52412946
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||    
52412903 atgacatgtttataagctgttttcagcttatttccatatgctct 52412946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14548720 - 14548770
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||| || ||| | ||||||||||||||||||||||||||| ||||||    
14548720 atgacattttaataggctgttttcagcttatttccataagctctccagaat 14548770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 48048981 - 48049019
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||| |||||| ||||||||||||||||||||||    
48048981 atgacatgtccataagctgttttcagcttatttccataa 48049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52440661 - 52440707
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||||| || |||| |||||| ||||||    
52440661 atgacatgttcataagttgttttcaactaattttcataagttcttca 52440707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 23785316 - 23785283
Alignment:
11 cataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||| ||||||||||||||    
23785316 cataagttgttttcagcttgtttccataagctct 23785283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34954153 - 34954112
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||| || |||||||||||||||| ||||||||    
34954153 atgacatgttcatgagctgttttcagcttattttcataagct 34954112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50004723 - 50004682
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||| |||| ||||||||||||||||| |||||||    
50004723 atgacatgttcttaagctgttttcagcttatttcaataagct 50004682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 2318713 - 2318673
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||| ||| ||||||||||||||||||||| |||||||||    
2318713 acatggtcagaagttgttttcagcttatttctataagctct 2318673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5166394 - 5166350
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctctt 45  Q
    |||||||||||||||| |||||||| ||||||| |||| ||||||    
5166394 atgacatgttcataagctgttttcatcttattttcatacgctctt 5166350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12923324 - 12923356
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    ||||||||| |||||||||||||||||||||||    
12923324 atgacatgtccataagttgttttcagcttattt 12923356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 26330323 - 26330363
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||| ||| ||||||| |||||||||||||||    
26330323 tgacatgttcataggttcttttcaggttatttccataagct 26330363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 27792932 - 27792900
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||| |||||||||    
27792932 ataagttgttttcagcttatttctataagctct 27792900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36445896 - 36445856
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagc 41  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
36445896 atgacatgttcattagttgttttcatcttattttcataagc 36445856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41724283 - 41724251
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    ||||||||| |||||||||||||||||||||||    
41724283 atgacatgtccataagttgttttcagcttattt 41724251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 44747173 - 44747201
Alignment:
1 atgacatgttcataagttgttttcagctt 29  Q
    |||||||||||||||||||||||||||||    
44747173 atgacatgttcataagttgttttcagctt 44747201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 53736122 - 53736166
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||||    
53736122 acatgttcataagttgctttcagcttattttcataaacacttcag 53736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 55113598 - 55113570
Alignment:
82 ttatcatgataaacacttatgctataagc 110  Q
    |||||||||||||||||||||||||||||    
55113598 ttatcatgataaacacttatgctataagc 55113570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17258882 - 17258946
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca 63  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||  ||||||||||||    
17258882 atgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaaca 17258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12521599 - 12521553
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||    
12521599 atgatatgttcataagctgttttcagcttatttccataagctcttca 12521553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35963312 - 35963266
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
35963312 atgacatgtccataagttgttttcagcttatttccataagcttttca 35963266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37526198 - 37526247
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaa 50  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||    
37526198 atgacatgttaataagctgttttcagcttatttccataagctctccagaa 37526247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19138716 - 19138759
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
19138716 atgacatgtacataaattgttttcagcttatttccataagctct 19138759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33533538 - 33533581
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
33533538 atgacatattcataagttgttttcaacttatttccataagctct 33533581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36638818 - 36638775
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
36638818 atgacatgttcataagcttttttcagcttatttccataagctct 36638775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37690635 - 37690678
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
37690635 atgacatgttaataagctgttttcagcttatttccataagctct 37690678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1899225 - 1899187
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||| |||||||||||||||||||||||||||||    
1899225 atgacatgtgcataagttgttttcagcttatttccataa 1899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2880546 - 2880596
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||| ||||    
2880546 atgatatgttcataaggtgttttcagcttatttccataaactcttctgaat 2880596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 5951978 - 5952031
Alignment:
12 ataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca 63  Q
    ||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||    
5951978 ataagttgttttcagcttatttccataagctattcagtataatttatgaaaaca 5952031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 11615568 - 11615530
Alignment:
5 catgttcataagttgttttcagcttatttccataagctc 43  Q
    |||||||||||| ||||||||||||||||||||||||||    
11615568 catgttcataagctgttttcagcttatttccataagctc 11615530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37588359 - 37588409
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||| ||||||    
37588359 atgaaatgttaataagctgttttcagcttatttccataagctctccagaat 37588409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37611215 - 37611257
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
37611215 tgacatgttcataagctgttttcaggttatttccataagctct 37611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37787945 - 37787987
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
37787945 tgacatgttcataagctgttttcaggttatttccataagctct 37787987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 1084125 - 1084166
Alignment:
6 atgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
1084125 atgttcatgagttgtttttagcttatttccataagctcttca 1084166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 16457613 - 16457645
Alignment:
2 tgacatgttcataagttgttttcagcttatttc 34  Q
    |||||||||||||||||||||||||||||||||    
16457613 tgacatgttcataagttgttttcagcttatttc 16457645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 38104867 - 38104899
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||||||||    
38104867 ataagttgttttcagcttatttccataagctct 38104899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 499730 - 499773
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||| | |||||||||||||||||||||||||| ||||    
499730 atgacatgttaacaagttgttttcagcttatttccataaactct 499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6109554 - 6109511
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| |||| |||||||||||||||||||||||||| |||||||    
6109554 atgatatgtccataagttgttttcagcttatttccaaaagctct 6109511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 8651355 - 8651394
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctc 43  Q
    |||||| ||||||||||||||||| |||||||||||||||    
8651355 acatgtccataagttgttttcagcatatttccataagctc 8651394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10125717 - 10125760
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||    
10125717 atgacatgttgataaggtgttttcagcttattttcataagctct 10125760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11707126 - 11707083
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||| |||||||||||||||||||||| || |||||||    
11707126 atgacatgtttataagttgttttcagcttattttcaaaagctct 11707083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 15074750 - 15074789
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||| |||||| |||||||||||||||||||||||||    
15074750 gacatgtccataagctgttttcagcttatttccataagct 15074789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 20028500 - 20028535
Alignment:
12 ataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||| ||||||||||||    
20028500 ataagttgttttcagcttatttctataagctcttca 20028535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32408591 - 32408638
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    ||||||||| | ||||||| |||| |||||||||||||||||||||||    
32408591 atgacatgtccgtaagttggtttctgcttatttccataagctcttcag 32408638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 39607546 - 39607511
Alignment:
12 ataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||| ||||||||||||    
39607546 ataagttgttttcagcttatttcgataagctcttca 39607511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3504815 - 3504765
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||||||  |||| |||||||||||||||| |||||||||| ||||||    
3504815 atgacatgtttgtaagctgttttcagcttatttacataagctctccagaat 3504765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13604848 - 13604894
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||| |||| |||||||||| ||||||| |||||||||||||    
13604848 atgacatgtccatacgttgttttcaacttattttcataagctcttca 13604894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 19460633 - 19460595
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||| ||||||||||| |||||||||||||||    
19460633 atgttcataagatgttttcagctcatttccataagctct 19460595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 28413288 - 28413326
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||| |||||||||||||||||||||| ||||    
28413288 atgttcataagctgttttcagcttatttccataaactct 28413326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 9106884 - 9106851
Alignment:
9 ttcataagttgttttcagcttatttccataagct 42  Q
    |||||||| |||||||||||||||||||||||||    
9106884 ttcataagctgttttcagcttatttccataagct 9106851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10303867 - 10303826
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||    
10303867 atgacatgtccataagttgttgtcagcttattttcataagct 10303826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12467204 - 12467163
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    |||||||||| ||||| |||||||||||||||| ||||||||    
12467204 atgacatgtttataagctgttttcagcttattttcataagct 12467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 18704046 - 18704079
Alignment:
12 ataagttgttttcagcttatttccataagctctt 45  Q
    ||||||||||||||||||||||||||||| ||||    
18704046 ataagttgttttcagcttatttccataagatctt 18704079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 8089734 - 8089698
Alignment:
81 cttatcatgataaacacttatgctataagccacaaat 117  Q
    |||||||||||||||||||||||||| ||| ||||||    
8089734 cttatcatgataaacacttatgctatgagctacaaat 8089698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17369438 - 17369482
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctctt 45  Q
    |||||||||  ||||||||||||||| ||||||| ||||||||||    
17369438 atgacatgtctataagttgttttcagattatttctataagctctt 17369482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 18906403 - 18906367
Alignment:
11 cataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||||||||||||||||||| ||||||| ||||    
18906403 cataagttgttttcagcttatttcgataagcttttca 18906367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30653373 - 30653416
Alignment:
1 atgacatgttcataa--gttgttttcagcttatttccataagct 42  Q
    |||||||||||||||  | |||||||||||||||||||||||||    
30653373 atgacatgttcataaaagctgttttcagcttatttccataagct 30653416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 40590818 - 40590786
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||| ||||||||||||||||||||    
40590818 ataagttgttttgagcttatttccataagctct 40590786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 48748321 - 48748361
Alignment:
8 gttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||||||||||||||||||||||||||||||||||||||||    
48748321 gttcataagttgttttcagcttatttccataagctcttcag 48748361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10199407 - 10199450
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
10199407 atgacatgttcataagttgttttcagcttattttcataagctct 10199450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37593683 - 37593729
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
37593683 atgacatgttcataagctgttttcagcttattttcataagctcttca 37593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6292564 - 6292521
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
6292564 atgacatgttcataagctgttttcagcttattttcataagctct 6292521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25479652 - 25479609
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
25479652 atgacatgttcattagttgttttcagcttattttcataagctct 25479609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27140549 - 27140506
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
27140549 atgacatgtccataagttgttttcagcttatttgcataagctct 27140506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28935875 - 28935922
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||    
28935875 atgacatgtccataagttttttttagcttatttccataagctcttcag 28935922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31118114 - 31118075
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||| ||||||||||||||||||||||||||    
31118114 atgacatgttcatcagttgttttcagcttatttccataag 31118075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31517739 - 31517782
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
31517739 atgacatgttcataagctgttttcagcttattttcataagctct 31517782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46252681 - 46252724
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||| |||||| ||||||||||    
46252681 atgacatgttcataagttgttttcaggttattttcataagctct 46252724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 7262518 - 7262564
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||    
7262518 tgacatgttcataagctgttttcaccttatttccacaagctcttcag 7262564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14629965 - 14630003
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
14629965 atgatatgttcataagttgttttcagcttatttccataa 14630003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 15361106 - 15361068
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||| ||||||||||    
15361106 atgttcataagttgttttcagcttattttcataagctct 15361068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 28077073 - 28077111
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||| |||||||||    
28077073 atgttcataagttgttttcagcttatttcaataagctct 28077111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29007715 - 29007761
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||    
29007715 atgatatgttcataagttgttttcagcttatttcgataagcttttca 29007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34290307 - 34290261
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||    
34290307 atgacatattcataagttgttttcagcttattttcataagttcttca 34290261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38170689 - 38170735
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||    
38170689 atgacatgttcataagttgttttcagcttgttttcctaagctcttca 38170735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 43954053 - 43954091
Alignment:
10 tcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||||||||||||||||||||| ||||||||||||||||    
43954053 tcataagttgttttcagcttatctccataagctcttcag 43954091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 219556 - 219597
Alignment:
7 tgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
219556 tgttcataagctgttttcagctcatttccataagctcttcag 219597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4549301 - 4549260
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    |||||||||  |||||||||||||||||||||||||||||||    
4549301 atgacatgtctataagttgttttcagcttatttccataagct 4549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12477286 - 12477323
Alignment:
1 atgacatgttcataagttgttttcagcttatttccata 38  Q
    ||||||||| ||||||||||||||||||||||||||||    
12477286 atgacatgtccataagttgttttcagcttatttccata 12477323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28689451 - 28689492
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
28689451 atgacatgtccataagttgttttcagcttattttcataagct 28689492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30257754 - 30257690
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca 63  Q
    |||||||||||||||| ||||||||||||||||| |||||| || ||| ||  ||||||||||||    
30257754 atgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaaca 30257690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 32182337 - 32182296
Alignment:
6 atgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
32182337 atgttcataagtttttttcagcttatttccttaagctcttca 32182296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33723381 - 33723422
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||| || |||||||||||||||||||||||||    
33723381 atgacatgttcatgagatgttttcagcttatttccataagct 33723422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 39347970 - 39348007
Alignment:
5 catgttcataagttgttttcagcttatttccataagct 42  Q
    ||||| ||||||||||||||||||||||||||||||||    
39347970 catgtccataagttgttttcagcttatttccataagct 39348007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47877180 - 47877139
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    |||||||| |||||||||||||||||||||||| ||||||||    
47877180 atgacatgctcataagttgttttcagcttattttcataagct 47877139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 5047215 - 5047171
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||    
5047215 gacatattcatacgctgttttcagcttatttccataagctcttca 5047171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5886993 - 5887025
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    |||||||||||||||||||||||||||||||||    
5886993 atgacatgttcataagttgttttcagcttattt 5887025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 6279467 - 6279427
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
6279467 acatgtccataagttgttttcagcgtatttccataagctct 6279427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 11893602 - 11893638
Alignment:
11 cataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||||||||| |||||||    
11893602 cataagttgttttcagcttatttccataaactcttca 11893638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 16322910 - 16322874
Alignment:
11 cataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||| |||||||||||||||||||||||    
16322910 cataagttgtttttagcttatttccataagctcttca 16322874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 26916262 - 26916222
Alignment:
11 cataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
26916262 cataagttgtttccagcttatttccataagctctccagaat 26916222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 32859948 - 32859988
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
32859948 acatgttcataaattgttttcagcttgtttccataagctct 32859988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 35590898 - 35590934
Alignment:
8 gttcataagttgttttcagcttatttccataagctct 44  Q
    |||||| ||||||||||||||||||||||||||||||    
35590898 gttcatcagttgttttcagcttatttccataagctct 35590934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 47885039 - 47885071
Alignment:
8 gttcataagttgttttcagcttatttccataag 40  Q
    |||||||||||||||||||||||||||||||||    
47885039 gttcataagttgttttcagcttatttccataag 47885071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 625632 - 625593
Alignment:
12 ataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||||||||||||| |||||||| ||||||||||||||||    
625632 ataagttgttttcaacttatttctataagctcttcagaat 625593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3924695 - 3924648
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||| ||||| ||||||||||||| |||||||||||||| ||||||||    
3924695 atgaaatgtttataagttgttttcggcttatttccataaactcttcag 3924648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4549919 - 4549888
Alignment:
1 atgacatgttcataagttgttttcagcttatt 32  Q
    ||||||||||||||||||||||||||||||||    
4549919 atgacatgttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4699614 - 4699657
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||| |||||||||| |||||||||    
4699614 atgacatgttcataagctgtttttagcttatttctataagctct 4699657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6932960 - 6933007
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
6932960 atgatatgttcataagttagtttcagtttatttccataagctcttcag 6933007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8016328 - 8016285
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||    
8016328 atgacatgttcataacttgttttcagcttattttcctaagctct 8016285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 23902070 - 23902109
Alignment:
5 catgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||| |||||||||||||||||||| |||||||||||||    
23902070 catgtgcataagttgttttcagcttacttccataagctct 23902109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26184819 - 26184776
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||    
26184819 atgacatgtccataagctgttttcagattatttccataagctct 26184776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30371219 - 30371176
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||    
30371219 atgacatgtccataagttgttttcagcttatttcaatacgctct 30371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35017647 - 35017604
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||    
35017647 atgacatgtccataagttattttcaacttatttccataagctct 35017604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35925761 - 35925718
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||    
35925761 atgacatgttcataagctgttttcaacttatttccataaactct 35925718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 42397792 - 42397749
Alignment:
5 catgttcataagttgttttcagctt-atttccataagctcttca 47  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
42397792 catgttcataagttgttttcagcttaatttccataagcacttca 42397749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3223738 - 3223697
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctc 43  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
3223738 atgacatgtttataagttgttttcagcttattt-cataagctc 3223697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 6659580 - 6659542
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| |||||||||||||||||||||||| |||||||||    
6659580 atgtccataagttgttttcagcttatttcgataagctct 6659542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15579553 - 15579515
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||| ||||||||||| |||||||||||||||||    
15579553 atgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30815652 - 30815698
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||||||||||  |||||||||||||||| |||||| ||||||    
30815652 atgacatgttcataaaatgttttcagcttattttcataagttcttca 30815698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44031998 - 44032044
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||| |||||| | ||||||||| ||||||||||||||||||    
44031998 atgacatgtccataagctattttcagctaatttccataagctcttca 44032044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 4025148 - 4025119
Alignment:
8 gttcataagttgttttcagcttatttccat 37  Q
    ||||||||||||||||||||||||||||||    
4025148 gttcataagttgttttcagcttatttccat 4025119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 33108631 - 33108664
Alignment:
11 cataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||| ||||||||||||||||||    
33108631 cataagttgttttcaacttatttccataagctct 33108664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34278692 - 34278725
Alignment:
1 atgacatgttcataagttgttttcagcttatttc 34  Q
    |||||||||||||| |||||||||||||||||||    
34278692 atgacatgttcataggttgttttcagcttatttc 34278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 38266461 - 38266502
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||| ||||||||| |||||||| |||||||||    
38266461 gacatgttcataatttgttttcaacttatttctataagctct 38266502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 38503470 - 38503503
Alignment:
7 tgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||||||||||||||||| ||||||    
38503470 tgttcataagttgttttcagcttattttcataag 38503503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 47917307 - 47917274
Alignment:
1 atgacatgttcataagttgttttcagcttatttc 34  Q
    ||||||||||||||||||||||||| ||||||||    
47917307 atgacatgttcataagttgttttcaacttatttc 47917274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 4768830 - 4768866
Alignment:
3 gacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||| ||||| |||||||||||||||||||||||    
4768830 gacatgtccataacttgttttcagcttatttccataa 4768866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 6102219 - 6102187
Alignment:
7 tgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||| |||||||||||||||||||||||    
6102219 tgttcataaattgttttcagcttatttccataa 6102187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 12564509 - 12564537
Alignment:
12 ataagttgttttcagcttatttccataag 40  Q
    |||||||||||||||||||||||||||||    
12564509 ataagttgttttcagcttatttccataag 12564537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 15558285 - 15558249
Alignment:
4 acatgttcataagttgttttcagcttatttccataag 40  Q
    ||||| ||||||||||||||||||||||||| |||||    
15558285 acatgctcataagttgttttcagcttatttctataag 15558249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 23402087 - 23402059
Alignment:
16 gttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||||    
23402087 gttgttttcagcttatttccataagctct 23402059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29635418 - 29635386
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    |||||||||| ||||||||||||||||||||||    
29635418 atgacatgtttataagttgttttcagcttattt 29635386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 33722411 - 33722443
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||| ||||    
33722411 ataagttgttttcagcttatttccataacctct 33722443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 44815313 - 44815345
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||| ||||||||||||||||||||||||||||    
44815313 ataaattgttttcagcttatttccataagctct 44815345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 49125904 - 49125872
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||| ||||||||||||||    
49125904 ataagttgttttcagcttgtttccataagctct 49125872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11000575 - 11000622
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
11000575 atgacttgttcataagttgtcttcagcttatttccataagctcttcag 11000622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41606902 - 41606945
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
41606902 atgacatgttcaaaagttgttttcagcttatttccataagctct 41606945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6950393 - 6950349
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctctt 45  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
6950393 atgacatgtcgataagttgttttcagcttatttccataagctctt 6950349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 42215084 - 42215124
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||||| ||||||||||    
42215084 acatgttcataagttgttttcagcttatttacataagctct 42215124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20672821 - 20672778
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
20672821 atgacatgttcataagctgttttcagcttattttcataagctct 20672778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25869265 - 25869308
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
25869265 atgacatgtccataagttgttttcagcttatttccataaactct 25869308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30389170 - 30389131
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||||||||||||||||||||||| ||||||    
30389170 atgacatgttcataagttgttttcagcttattttcataag 30389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 30918176 - 30918141
Alignment:
9 ttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||||||||||    
30918176 ttcataagttgttttcagcttatttccataagctct 30918141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13000423 - 13000464
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| || |||||||||||||||||||||||||||||    
13000423 atgacatgtccacaagttgttttcagcttatttccataagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2235655 - 2235699
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctctt 45  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||    
2235655 atgacatgttcataagtcgtttttagctcatttccataagctctt 2235699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 8060733 - 8060697
Alignment:
8 gttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||| |||||||||||||||||||||||||    
8060733 gttcataagttattttcagcttatttccataagctct 8060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 11185289 - 11185249
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
11185289 acatgttcataagttgttttcaacttatttccatcagctct 11185249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 2458569 - 2458608
Alignment:
5 catgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||| ||||||||| |||||||||||||||||    
2458569 catgttcataagctgttttcagtttatttccataagctct 2458608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2594996 - 2595027
Alignment:
1 atgacatgttcataagttgttttcagcttatt 32  Q
    ||||||||||||||||||||||||||||||||    
2594996 atgacatgttcataagttgttttcagcttatt 2595027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9835899 - 9835938
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataag 40  Q
    |||||||||||||||| |||||||| ||||||||||||||    
9835899 atgacatgttcataagctgttttcatcttatttccataag 9835938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10383956 - 10383913
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||    
10383956 atgacattttcataagctgtttacagcttatttccataagctct 10383913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11795163 - 11795120
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||  |||||||||||||||||||||||||||    
11795163 atgacatgtccataacctgttttcagcttatttccataagctct 11795120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28769338 - 28769381
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||    
28769338 atgatatgtccataagttgttttcagcttatttccataaactct 28769381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42215305 - 42215348
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||    
42215305 atgacttgttcataagctgttttcagcttatttacataagctct 42215348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4281617 - 4281579
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||||||||||||||||||| ||||||| |||||    
4281617 atgacatgttcataagttgttttcatcttattttcataa 4281579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30191140 - 30191178
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    |||||||||||| || |||||||||||||||||||||||    
30191140 atgacatgttcaaaacttgttttcagcttatttccataa 30191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 926546 - 926505
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||||  |||||||||||||||||| |||||    
926546 atgacatgttcataagccgttttcagcttatttccacaagct 926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3254296 - 3254263
Alignment:
1 atgacatgttcataagttgttttcagcttatttc 34  Q
    |||||||||||||||| |||||||||||||||||    
3254296 atgacatgttcataagctgttttcagcttatttc 3254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 3536950 - 3536983
Alignment:
7 tgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||| ||||||||||||||||||||||||    
3536950 tgttcataaattgttttcagcttatttccataag 3536983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5231872 - 5231811
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcaga-attttatgaaaa 61  Q
    ||||||||| ||| || |||||||| |||||||| ||||||||||| || ||||||||||||    
5231872 atgacatgtccatgagctgttttcatcttatttcgataagctcttcggatattttatgaaaa 5231811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 30277254 - 30277287
Alignment:
11 cataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||| ||||    
30277254 cataagttgttttcagcttatttccataaactct 30277287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43704375 - 43704416
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    |||||||||||||||  |||||| ||||||||||||||||||    
43704375 atgacatgttcataaactgttttaagcttatttccataagct 43704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 44401630 - 44401593
Alignment:
3 gacatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||  ||||||||||||||||||||||||    
44401630 gacatgttcatacattgttttcagcttatttccataag 44401593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 779060 - 779092
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    ||||||||||||||||||||||||| |||||||    
779060 atgacatgttcataagttgttttcatcttattt 779092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3600737 - 3600777
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagc 41  Q
    ||||||||| ||||||||||||||| ||||||| |||||||    
3600737 atgacatgtccataagttgttttcaacttattttcataagc 3600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 7039867 - 7039835
Alignment:
15 agttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||| |||||||||||||||||||||    
7039867 agttgttttcaacttatttccataagctcttca 7039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 11183605 - 11183573
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    ||||| |||||||||||||||||||||||||||    
11183605 ataagctgttttcagcttatttccataagctct 11183573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11569456 - 11569488
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    ||||||||| |||||||||||||||||||||||    
11569456 atgacatgtacataagttgttttcagcttattt 11569488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12851244 - 12851204
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||| ||||||| |||||||| ||||||||||    
12851244 acatgttcataagatgttttcggcttattttcataagctct 12851204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14339604 - 14339644
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagc 41  Q
    ||||||||| ||||||||||||||| ||||||| |||||||    
14339604 atgacatgtccataagttgttttcaacttattttcataagc 14339644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14949937 - 14949893
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctctt 45  Q
    ||||||||| |||||| ||||||||||||||||| |||| |||||    
14949937 atgacatgtccataagctgttttcagcttatttctataatctctt 14949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1137783 - 1137740
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
1137783 atgacatgttcataagttgttttcagtttatttccataagctct 1137740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7694009 - 7694052
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
7694009 atgacatgttcataagttgttttcagcttatttccataaactct 7694052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8469376 - 8469413
Alignment:
1 atgacatgttcataagttgttttcagcttatttccata 38  Q
    ||||||||||||||||||||||||||||||||||||||    
8469376 atgacatgttcataagttgttttcagcttatttccata 8469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 43824350 - 43824313
Alignment:
5 catgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||||||||||||||||||||||||||    
43824350 catgttcataagttgttttcagcttatttccataagct 43824313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 24929560 - 24929521
Alignment:
5 catgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||| ||||||||||||||||||||||||||||    
24929560 catgttcataaattgttttcagcttatttccataagctct 24929521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29263441 - 29263398
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| ||||||||||||||||||||||||||||||| |||||||    
29263441 atgatatgttcataagttgttttcagcttatttccacaagctct 29263398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 5131254 - 5131292
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| ||||||||||||||||||||||||||||||||||    
5131254 atgtccataagttgttttcagcttatttccataagctct 5131292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23819160 - 23819114
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||    
23819160 atgacatgtccataagttgttttcatcttatttctataagctcttca 23819114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28300298 - 28300344
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||||    
28300298 atgacatgttcttaagttgttttcaacttattttcataagctcttca 28300344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24747390 - 24747353
Alignment:
1 atgacatgttcataagttgttttcagcttatttccata 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
24747390 atgacatgttcataagttgttttcagcttattttcata 24747353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 45732742 - 45732701
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||| | |||||||||||||||||||||||||||    
45732742 gacatgttcatatgatgttttcagcttatttccataagctct 45732701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 47146028 - 47145987
Alignment:
6 atgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
47146028 atgttcataagttgttttcaccttattttcataagctcttca 47145987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49486531 - 49486490
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
49486531 atgacatgttcataagttgtttttagcgtatttccataagct 49486490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 2592320 - 2592351
Alignment:
13 taagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||||||||||    
2592320 taagttgttttcagcttatttccataagctct 2592351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29467623 - 29467666
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||    
29467623 atgacatgtccataagctgttttcagcttatttccataaactct 29467666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6428089 - 6428043
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||| ||||||||| ||| ||| |||||||||||||||||||    
6428089 atgacatgtccataagttgatttaagcatatttccataagctcttca 6428043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 17884134 - 17884096
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||| |||| ||||||||||    
17884134 atgttcataagttgttttcagctaattttcataagctct 17884096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 18628555 - 18628585
Alignment:
14 aagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||||||    
18628555 aagttgttttcagcttatttccataagctct 18628585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20105430 - 20105479
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||| |||||||| | |||||||||||||| |||||||||||||||||    
20105430 atgacatattcataagct-ttttcagcttatttacataagctcttcagaat 20105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 33534169 - 33534211
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||| | ||||||||||||||||||||||| ||||||||||    
33534169 tgacatatccataagttgttttcagcttattttcataagctct 33534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 35406013 - 35405975
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||| ||||||||||||| |||||||||||||    
35406013 atgttcataagctgttttcagcttacttccataagctct 35405975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35743353 - 35743307
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||||| ||||||||||| || ||||||||||||| |||||||    
35743353 atgacatgtttataagttgtttccaacttatttccataaactcttca 35743307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43932506 - 43932456
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||||| ||||||||||||||| ||||||| || ||| ||||||||||    
43932506 atgacatgtccataagttgttttcatcttattttcacaagttcttcagaat 43932456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 45738139 - 45738105
Alignment:
10 tcataagttgttttcagcttatttccataagctct 44  Q
    ||||||| |||||||||||||||||||||||||||    
45738139 tcataagatgttttcagcttatttccataagctct 45738105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 46110265 - 46110231
Alignment:
10 tcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||||||||||||| |||||||||    
46110265 tcataagttgttttcagcttatttctataagctct 46110231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 49219200 - 49219166
Alignment:
11 cataagttgttttcagcttatttccataagctctt 45  Q
    ||||||||||||||||||||||||||||| |||||    
49219200 cataagttgttttcagcttatttccataatctctt 49219166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 53673662 - 53673700
Alignment:
6 atgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| ||||||||||||||||||||||| ||||||||||    
53673662 atgtccataagttgttttcagcttatttacataagctct 53673700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 19429770 - 19429737
Alignment:
11 cataagttgttttcagcttatttccataagctct 44  Q
    |||||| |||||||||||||||||||||||||||    
19429770 cataagctgttttcagcttatttccataagctct 19429737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 37575944 - 37575981
Alignment:
10 tcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||| |||||||||| |||||||    
37575944 tcataagttgttttcagctcatttccataaactcttca 37575981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42461322 - 42461281
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||    
42461322 atgacgtgttcataagttgatttcagcttattttcataagct 42461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46019628 - 46019673
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttc 46  Q
    |||||||||| |||||||||||||| ||||| | ||||||||||||    
46019628 atgacatgttgataagttgttttcaacttatattcataagctcttc 46019673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46201419 - 46201386
Alignment:
1 atgacatgttcataagttgttttcagcttatttc 34  Q
    |||||||||||||| |||||||||||||||||||    
46201419 atgacatgttcataggttgttttcagcttatttc 46201386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50569328 - 50569389
Alignment:
1 atgacatgttcataagtt-gttttcagcttatttccataagctcttcagaattttatgaaaa 61  Q
    ||||||| |||||||||| ||||||||||||||  ||||||||| ||| |||| ||||||||    
50569328 atgacattttcataagtttgttttcagcttattgtcataagctcctcataattatatgaaaa 50569389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17223035 - 17223071
Alignment:
1 atgacatgttcataagttgttttcagcttatttccat 37  Q
    |||||||||||||||| |||||||| |||||||||||    
17223035 atgacatgttcataagctgttttcaacttatttccat 17223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19304997 - 19304961
Alignment:
1 atgacatgttcataagttgttttcagcttatttccat 37  Q
    ||||||||| ||||||||||||||||||| |||||||    
19304997 atgacatgtccataagttgttttcagcttgtttccat 19304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 30631534 - 30631502
Alignment:
4 acatgttcataagttgttttcagcttatttcca 36  Q
    ||||||||||||||||| |||||||||||||||    
30631534 acatgttcataagttgtgttcagcttatttcca 30631502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 35064923 - 35064883
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||| |||| ||||||||||||||||||||||| ||||    
35064923 acatgtttataaattgttttcagcttatttccataaactct 35064883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46401335 - 46401303
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    |||||||||||||||||||| ||||||||||||    
46401335 atgacatgttcataagttgtattcagcttattt 46401303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 55084483 - 55084523
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||| || ||||||||||||| ||||||||||    
55084483 acatgttcataagctggtttcagcttattttcataagctct 55084523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41809244 - 41809285
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
41809244 atgacatgttcataagttgtttttagcttatttccataagct 41809285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1647307 - 1647264
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||| ||||||| |||||||||||||||||||||||||||    
1647307 atgacatgctcataagctgttttcagcttatttccataagctct 1647264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16867810 - 16867767
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
16867810 atgacatattcataagttgttttcaacttatttccataagctct 16867767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28677658 - 28677701
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
28677658 atgacattttcataagttgttttcggcttatttccataagctct 28677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29316774 - 29316813
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataag 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
29316774 atgacatgttcataagttcttttcagcttatttccataag 29316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35379015 - 35379058
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||    
35379015 atgacttgttcataagttgttttcagcttattttcataagctct 35379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41817239 - 41817196
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
41817239 atgacatgttgataatttgttttcagcttatttccataagctct 41817196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7871714 - 7871668
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||||    
7871714 atgatatgatcataaggtgttttcagcttatttccataagctcttca 7871668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 8820292 - 8820334
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    
8820292 tgacatgttcacaagctgttttcagcttatttccataagctct 8820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40158789 - 40158739
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||||||||| ||||||||||||||||||| || |||||||||| ||||||    
40158789 atgacatgtttataagttgttttcagcttaattacataagctctccagaat 40158739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 42817379 - 42817425
Alignment:
5 catgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||    
42817379 catgttcttaagttgtttttagcttacttccataagctcttcagaat 42817425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1056128 - 1056171
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||    
1056128 atgacatgttcattagttgttttcagcttgttttcataagctct 1056171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1160670 - 1160717
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    ||||||||| ||||||||||||| || ||||||||||||||| |||||    
1160670 atgacatgtccataagttgtttttagtttatttccataagctgttcag 1160717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1939331 - 1939374
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||    
1939331 atgacatgtccataagctgttttcaacttatttccataagctct 1939374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5781740 - 5781697
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||  |||||||||||||||||||||||||||    
5781740 atgacatgtgcataaactgttttcagcttatttccataagctct 5781697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10198479 - 10198522
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||    
10198479 atgacatgttcataagctgttgtcagcttatttccataatctct 10198522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 11063252 - 11063217
Alignment:
13 taagttgttttcagcttatttccataagctcttcag 48  Q
    |||| |||||||||||||||||||||||||||||||    
11063252 taagctgttttcagcttatttccataagctcttcag 11063217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31739971 - 31740014
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||    
31739971 atgacatgatcataagctgttttcagattatttccataagctct 31740014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34652035 - 34652078
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||    
34652035 atgacatgtccataagctgttttcaacttatttccataagctct 34652078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35485988 - 35485941
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||| ||||||||||| ||||||||||| ||||||||| |||||||||    
35485988 atgatatgttcataagctgttttcagctcatttccataggctcttcag 35485941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38388758 - 38388707
Alignment:
1 atgacatgttcataagttgtttt-cagcttatttccataagctcttcagaat 51  Q
    |||||||||||||||  |||||| ||||||||||||||||| ||||||||||    
38388758 atgacatgttcataaactgtttttcagcttatttccataagttcttcagaat 38388707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43065449 - 43065492
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||    
43065449 atgacatgtccataaattgttttcagcttatttcaataagctct 43065492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43910998 - 43911029
Alignment:
1 atgacatgttcataagttgttttcagcttatt 32  Q
    ||||||||||||||||||||||||||||||||    
43910998 atgacatgttcataagttgttttcagcttatt 43911029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44443392 - 44443349
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| |||||||||||||||||||||||||||| |||| |||||    
44443392 atgaaatgttcataagttgttttcagcttattttcatatgctct 44443349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10567128 - 10567078
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||||||| ||||||||||||||||||| |||| || ||||||| ||||||    
10567128 atgacatgatcataagttgttttcagctaattttcacaagctctccagaat 10567078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12147528 - 12147478
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||||||||||| |||||||||| |||||| |||||||| | ||||||    
12147528 atgacatgttcataaattgttttcagtttattttcataagctatccagaat 12147478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 19333325 - 19333367
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
19333325 tgacatgttcataagctgttctcagcttattttcataagctct 19333367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28039331 - 28039369
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||| |||||||||| ||||||||||||||||||||||    
28039331 atgacttgttcataagctgttttcagcttatttccataa 28039369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 1160741 - 1160782
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
1160741 gacatgtctataagttgttttcagtttatttccataagctct 1160782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 7928304 - 7928337
Alignment:
7 tgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||||||||||||||||| ||||||    
7928304 tgttcataagttgttttcagcttattttcataag 7928337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11063559 - 11063518
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||    
11063559 atgacatgtccataagttgtttttagcttattttcataagct 11063518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16551839 - 16551880
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||| | |||||||||| |||||||||||||||||||||    
16551839 atgacatatacataagttgtattcagcttatttccataagct 16551880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 25796209 - 25796242
Alignment:
11 cataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||| |||||||||    
25796209 cataagttgttttcagcttatttcaataagctct 25796242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35378531 - 35378572
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||| |||||||||||| |||||||||||||| ||||||||    
35378531 atgacttgttcataagttattttcagcttattttcataagct 35378572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 42420064 - 42420027
Alignment:
5 catgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||| |||||||||||| |||||||||||||    
42420064 catgttcataaattgttttcagctcatttccataagct 42420027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 3235385 - 3235421
Alignment:
3 gacatgttcataagttgttttcagcttatttccataa 39  Q
    |||| ||||||||| ||||||||||||||||||||||    
3235385 gacaggttcataagctgttttcagcttatttccataa 3235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 9395195 - 9395151
Alignment:
7 tgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||| ||||| |||||||||||||||| |||||||||| ||||||    
9395195 tgtttataagctgttttcagcttattttcataagctctacagaat 9395151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14666619 - 14666579
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagc 41  Q
    |||||||||||||| |||||||||| ||||||| |||||||    
14666619 atgacatgttcataggttgttttcaccttattttcataagc 14666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 18840856 - 18840824
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||| ||||||||||||||||||    
18840856 ataagttgttttcatcttatttccataagctct 18840824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 22681187 - 22681223
Alignment:
4 acatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||| |||||| ||||||||||||||||    
22681187 acatgttcataagctgtttttagcttatttccataag 22681223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 29628748 - 29628780
Alignment:
7 tgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||| |||||||||||||||||||||||    
29628748 tgttcataaattgttttcagcttatttccataa 29628780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30538172 - 30538204
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    ||||||||| |||||||||||||||||||||||    
30538172 atgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 41032965 - 41032997
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||| ||||    
41032965 ataagttgttttcagcttatttccataaactct 41032997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 43717137 - 43717177
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagctc 43  Q
    ||||| |||||| |||||||||||||||||| |||||||||    
43717137 gacattttcataggttgttttcagcttattttcataagctc 43717177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 20553172 - 20553132
Alignment:
3 gacatgttcataagttgttttcagcttatttccataagctc 43  Q
    |||||||||||||||||||||||| ||||||||||||||||    
20553172 gacatgttcataagttgttttcagattatttccataagctc 20553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4966227 - 4966180
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcag 48  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||    
4966227 atgatatgtccataagttgttttcagtttatttccataagctcttcag 4966180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7244751 - 7244708
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
7244751 atgacatgctcataagttgttttcagcttattttcataagctct 7244708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9423593 - 9423636
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
9423593 atgacatgttcataagttgttttcagcttatttcaagaagctct 9423636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35267433 - 35267390
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
35267433 atgacatgttcataggttgttttcagcttatttctataagctct 35267390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 24363601 - 24363643
Alignment:
2 tgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
24363601 tgacatgtccataagttgttttcagcttatttccataacctct 24363643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 26935564 - 26935606
Alignment:
9 ttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
26935564 ttcataagctgttttcagcttatttccataagctctttagaat 26935606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29286862 - 29286816
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||    
29286862 atgacatgttcatcagttgttttcagcttatttacataagcttttca 29286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44151479 - 44151525
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||    
44151479 atgacatgtccataagatgttttcagcttatttccataagcttttca 44151525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45859526 - 45859571
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttca 47  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
45859526 atgacatgttcata-gttgttttcagcttatttctataagctcttca 45859571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46082107 - 46082057
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcagaat 51  Q
    ||||||||  ||||||||||||||||||||||| |||||||||| ||||||    
46082107 atgacatgaccataagttgttttcagcttattttcataagctctccagaat 46082057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12234888 - 12234931
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||  ||||| |||||||||||||||||||||||||||    
12234888 atgacatgtctataagctgttttcagcttatttccataagctct 12234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 20888397 - 20888428
Alignment:
5 catgttcataagttgttttcagcttatttcca 36  Q
    ||||||||||||||||||||||||||||||||    
20888397 catgttcataagttgttttcagcttatttcca 20888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22551404 - 22551447
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||| | |||||||||||||||||| ||||||||||    
22551404 atgacatgttcaaatgttgttttcagcttatttacataagctct 22551447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27496406 - 27496449
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||    
27496406 atgacatgtccataagctgttttcagcttatttccataaactct 27496449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27503064 - 27503107
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||    
27503064 atgacatgtccataagctgttttcagcttatttccataaactct 27503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39345542 - 39345503
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
39345542 atgacatgtccataagttgctttcagcttatttccataag 39345503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 2825235 - 2825269
Alignment:
6 atgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||| |||||||||||||||||||||    
2825235 atgttcataagttattttcagcttatttccataag 2825269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33894698 - 33894660
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||| |||||||||||||||||||||||| ||||    
33894698 atgacatgtccataagttgttttcagcttatttcaataa 33894660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39334264 - 39334222
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctc 43  Q
    ||||||||| |||||||||  ||||||||||||||||||||||    
39334264 atgacatgtccataagttgcattcagcttatttccataagctc 39334222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 12792709 - 12792742
Alignment:
18 tgttttcagcttatttccataagctcttcagaat 51  Q
    |||||||||||||||||| |||||||||||||||    
12792709 tgttttcagcttatttccgtaagctcttcagaat 12792742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 18749818 - 18749855
Alignment:
3 gacatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||||  ||||||||||||||||||||||    
18749818 gacatgttcataagcagttttcagcttatttccataag 18749855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25511697 - 25511656
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||||||||| |||| |||| ||||||||||||||||    
25511697 atgacatgttcataaattgtcttcaacttatttccataagct 25511656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 28165156 - 28165119
Alignment:
7 tgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||| |||||||| ||||||||||||||||||    
28165156 tgttcataagctgttttcaacttatttccataagctct 28165119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 35007665 - 35007636
Alignment:
4 acatgttcataagttgttttcagcttattt 33  Q
    ||||||||||||||||||||||||||||||    
35007665 acatgttcataagttgttttcagcttattt 35007636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36598355 - 36598388
Alignment:
1 atgacatgttcataagttgttttcagcttatttc 34  Q
    |||||||||||||||| |||||||||||||||||    
36598355 atgacatgttcataagctgttttcagcttatttc 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39551547 - 39551588
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    ||||||||| |||||| |||| ||||||||||||||||||||    
39551547 atgacatgtccataaggtgttgtcagcttatttccataagct 39551588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 44777117 - 44777146
Alignment:
81 cttatcatgataaacacttatgctataagc 110  Q
    ||||||||||||||||||||||||||||||    
44777117 cttatcatgataaacacttatgctataagc 44777146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47134756 - 47134797
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagct 42  Q
    |||||| || ||||||||||||||||||||||| ||||||||    
47134756 atgacacgtccataagttgttttcagcttattttcataagct 47134797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21247997 - 21247965
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    ||||||||||||||||||||||| |||||||||    
21247997 atgacatgttcataagttgttttaagcttattt 21247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 27378836 - 27378891
Alignment:
10 tcataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca 63  Q
    ||||||||||||||||| |||||| |||||||||| ||| ||  ||||||||||||    
27378836 tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaaca 27378891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33645960 - 33646008
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctcttcaga 49  Q
    |||||||||  |||||||||||| || ||||||||||||||||| ||||    
33645960 atgacatgtctataagttgtttttaggttatttccataagctctccaga 33646008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33871320 - 33871288
Alignment:
1 atgacatgttcataagttgttttcagcttattt 33  Q
    ||||||||||||||||||||||| |||||||||    
33871320 atgacatgttcataagttgttttgagcttattt 33871288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 34754820 - 34754852
Alignment:
12 ataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||| ||||||    
34754820 ataagttgttttcagcttatttccatcagctct 34754852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 38010782 - 38010746
Alignment:
4 acatgttcataagttgttttcagcttatttccataag 40  Q
    ||||||||||||| |||||| ||||||||||||||||    
38010782 acatgttcataagctgtttttagcttatttccataag 38010746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 39281035 - 39281003
Alignment:
6 atgttcataagttgttttcagcttatttccata 38  Q
    |||| ||||||||||||||||||||||||||||    
39281035 atgtccataagttgttttcagcttatttccata 39281003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47395100 - 47395140
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
47395100 acatgtttataagttgttttcaacttatttccataggctct 47395140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 33637 - 33672
Alignment:
12 ataagttgttttcagcttatttccataagctcttca 47  Q
    ||||||||||||||||||||||||||||||||||||    
33637 ataagttgttttcagcttatttccataagctcttca 33672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10616 - 10654
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||||| |||||||||||||||||||||||||||||    
10616 atgacatgtccataagttgttttcagcttatttccataa 10654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 4937 - 4977
Alignment:
4 acatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||||||||||||||||||||  ||||||||||||    
4937 acatgttcataagttgttttcagcttaactccataagctct 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12703 - 12746
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||    
12703 atgacatgtccataagttgttttcagcttagctccataagctct 12746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3544 - 3501
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||    
3544 atgatatgtccataagttgttttcagcttatttccataatctct 3501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27072 - 27029
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    ||||||||| |||||  |||||||||||||||||||||||||||    
27072 atgacatgtgcataaactgttttcagcttatttccataagctct 27029  T

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Target: scaffold0153 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6493 - 6536
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
6493 atgacatgtctataagttgttttcagtttatttccataagctct 6536  T

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Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13513 - 13556
Alignment:
1 atgacatgttcataagttgttttcagcttatttccataagctct 44  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
13513 atgacatgtctataagttgttttcagtttatttccataagctct 13556  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 16179 - 16143
Alignment:
3 gacatgttcataagttgttttcagcttatttccataa 39  Q
    ||||||| ||||||||||||||| |||||||||||||    
16179 gacatgtccataagttgttttcaacttatttccataa 16143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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