View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5413_low_66 (Length: 244)
Name: NF5413_low_66
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5413_low_66 |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 1459015 - 1458856
Alignment:
| Q |
14 |
attattctcaagttcaagggcgtctgcaacatgtaaactctcggtttattcggaacaatatgattaagtaagcaagtagtagtttctctatt--ctctat |
111 |
Q |
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| T |
1459015 |
attattctcaagttcaagggtgtctgcaacatgtaaactctcggtttatttggaacaatattattaagtaagcaagtagtagtttctctattctctctgt |
1458916 |
T |
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| Q |
112 |
tgtttcattaattttatatttgaattactagacaccaagcaagcactttaatcattagtg |
171 |
Q |
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| T |
1458915 |
tgtttcattaattttatatttgaattactagacacaaagcaagcactttaatcattagtg |
1458856 |
T |
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