View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5413_low_81 (Length: 220)

Name: NF5413_low_81
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5413_low_81
NF5413_low_81
[»] chr8 (68 HSPs)
chr8 (90-209)||(26451482-26451601)
chr8 (85-211)||(42602457-42602583)
chr8 (85-211)||(41858073-41858197)
chr8 (123-213)||(18441389-18441479)
chr8 (85-164)||(22550862-22550941)
chr8 (85-163)||(34823014-34823092)
chr8 (121-213)||(41274625-41274717)
chr8 (85-163)||(1114740-1114818)
chr8 (85-164)||(35962304-35962383)
chr8 (89-164)||(39601705-39601780)
chr8 (85-156)||(41855365-41855436)
chr8 (111-211)||(15033095-15033197)
chr8 (85-158)||(18205783-18205856)
chr8 (149-213)||(3395927-3395991)
chr8 (149-213)||(22547504-22547568)
chr8 (85-157)||(35966753-35966825)
chr8 (154-213)||(24860448-24860507)
chr8 (85-130)||(20549263-20549308)
chr8 (85-158)||(22577662-22577735)
chr8 (89-158)||(34366912-34366981)
chr8 (85-158)||(42605237-42605310)
chr8 (85-156)||(2335153-2335224)
chr8 (107-158)||(39939218-39939269)
chr8 (89-164)||(41016415-41016490)
chr8 (88-158)||(2146960-2147029)
chr8 (85-131)||(41276890-41276936)
chr8 (101-158)||(3641659-3641716)
chr8 (85-142)||(28617565-28617622)
chr8 (89-158)||(38872933-38873002)
chr8 (106-163)||(40077248-40077305)
chr8 (85-142)||(44933856-44933913)
chr8 (116-164)||(184549-184597)
chr8 (92-164)||(546418-546490)
chr8 (88-156)||(5533030-5533098)
chr8 (116-164)||(8419432-8419480)
chr8 (88-164)||(21406267-21406343)
chr8 (88-164)||(21800759-21800835)
chr8 (116-164)||(26663030-26663078)
chr8 (88-156)||(28646252-28646320)
chr8 (88-156)||(28650836-28650904)
chr8 (116-164)||(32375679-32375727)
chr8 (87-147)||(39751073-39751132)
chr8 (86-158)||(43679396-43679467)
chr8 (85-156)||(27501597-27501668)
chr8 (86-165)||(28645371-28645450)
chr8 (86-165)||(28649955-28650034)
chr8 (115-158)||(32383208-32383251)
chr8 (115-158)||(32437163-32437206)
chr8 (89-156)||(38604253-38604320)
chr8 (149-200)||(38871834-38871885)
chr8 (85-156)||(44052231-44052302)
chr8 (85-131)||(1116218-1116264)
chr8 (116-158)||(18438662-18438704)
chr8 (85-131)||(34235153-34235199)
chr8 (116-158)||(36677932-36677974)
chr8 (118-164)||(43262451-43262497)
chr8 (85-131)||(45454403-45454449)
chr8 (91-152)||(7168091-7168152)
chr8 (85-130)||(22547466-22547511)
chr8 (116-165)||(40740934-40740983)
chr8 (90-131)||(41743892-41743933)
chr8 (116-164)||(483844-483892)
chr8 (116-164)||(7344554-7344602)
chr8 (116-164)||(15030912-15030960)
chr8 (116-164)||(17924280-17924328)
chr8 (116-156)||(22014274-22014314)
chr8 (116-164)||(22519559-22519607)
chr8 (116-164)||(45066358-45066406)
[»] chr3 (100 HSPs)
chr3 (85-211)||(41802995-41803121)
chr3 (85-213)||(34694382-34694510)
chr3 (85-213)||(55385134-55385262)
chr3 (85-213)||(43476188-43476317)
chr3 (85-211)||(55207613-55207739)
chr3 (85-213)||(49219739-49219867)
chr3 (90-213)||(49609385-49609508)
chr3 (117-213)||(13896824-13896920)
chr3 (89-213)||(41577076-41577200)
chr3 (123-211)||(51402348-51402436)
chr3 (85-213)||(4004750-4004879)
chr3 (85-213)||(52570514-52570642)
chr3 (85-199)||(24703377-24703491)
chr3 (85-213)||(2271260-2271389)
chr3 (85-213)||(36134320-36134449)
chr3 (85-164)||(34691622-34691701)
chr3 (85-164)||(2743395-2743474)
chr3 (146-213)||(45101796-45101863)
chr3 (85-164)||(48246409-48246488)
chr3 (142-213)||(51696522-51696593)
chr3 (85-164)||(9429846-9429925)
chr3 (85-164)||(13747716-13747794)
chr3 (85-164)||(19341591-19341670)
chr3 (92-163)||(20918009-20918080)
chr3 (92-163)||(20926971-20927042)
chr3 (88-209)||(41137718-41137829)
chr3 (149-213)||(19454299-19454363)
chr3 (116-213)||(34648150-34648249)
chr3 (89-164)||(600541-600616)
chr3 (85-164)||(4002502-4002581)
chr3 (85-164)||(24700718-24700797)
chr3 (85-164)||(43478827-43478906)
chr3 (147-213)||(43568925-43568991)
chr3 (85-158)||(19440253-19440326)
chr3 (85-154)||(46344934-46345003)
chr3 (85-158)||(46989544-46989617)
chr3 (85-158)||(48250872-48250945)
chr3 (85-158)||(48888738-48888810)
chr3 (111-167)||(2647693-2647749)
chr3 (85-157)||(7247864-7247936)
chr3 (90-158)||(30256006-30256074)
chr3 (88-164)||(36817518-36817594)
chr3 (85-164)||(8475823-8475902)
chr3 (115-210)||(46347672-46347767)
chr3 (151-213)||(7245155-7245217)
chr3 (85-158)||(2062383-2062456)
chr3 (85-158)||(11380438-11380511)
chr3 (85-142)||(13743290-13743347)
chr3 (85-158)||(14043901-14043974)
chr3 (85-158)||(29918344-29918417)
chr3 (85-158)||(29967497-29967570)
chr3 (111-164)||(34049103-34049156)
chr3 (111-164)||(54389818-54389871)
chr3 (111-163)||(44227135-44227187)
chr3 (85-140)||(16647168-16647223)
chr3 (85-156)||(27739572-27739643)
chr3 (85-156)||(34543141-34543212)
chr3 (87-209)||(20366191-20366313)
chr3 (116-158)||(41579727-41579769)
chr3 (88-158)||(42756159-42756229)
chr3 (90-164)||(45507394-45507468)
chr3 (88-158)||(49194953-49195023)
chr3 (85-158)||(28611103-28611176)
chr3 (115-164)||(35743579-35743628)
chr3 (111-164)||(49140844-49140897)
chr3 (85-133)||(2745233-2745281)
chr3 (116-164)||(6489357-6489405)
chr3 (116-164)||(6745323-6745371)
chr3 (88-156)||(12897824-12897892)
chr3 (85-157)||(14398532-14398604)
chr3 (85-164)||(36812833-36812913)
chr3 (116-164)||(41844361-41844409)
chr3 (116-164)||(46697739-46697787)
chr3 (87-131)||(50216884-50216928)
chr3 (116-164)||(50477208-50477256)
chr3 (85-157)||(50998684-50998756)
chr3 (85-164)||(4015126-4015205)
chr3 (85-156)||(28817006-28817077)
chr3 (121-164)||(30943222-30943265)
chr3 (85-164)||(42166407-42166486)
chr3 (91-158)||(49268848-49268915)
chr3 (116-158)||(3501898-3501940)
chr3 (85-131)||(23443136-23443182)
chr3 (116-158)||(42760212-42760254)
chr3 (88-142)||(50957685-50957739)
chr3 (85-158)||(2432946-2433019)
chr3 (127-164)||(4004885-4004922)
chr3 (85-142)||(14402989-14403046)
chr3 (107-164)||(16484453-16484510)
chr3 (85-158)||(52567760-52567833)
chr3 (116-164)||(2950394-2950442)
chr3 (116-164)||(3953212-3953260)
chr3 (116-164)||(4008320-4008368)
chr3 (116-164)||(6143699-6143747)
chr3 (116-164)||(8156536-8156584)
chr3 (116-164)||(42165191-42165239)
chr3 (116-164)||(49138642-49138690)
chr3 (116-164)||(49144453-49144501)
chr3 (126-158)||(50998657-50998689)
chr3 (116-164)||(54392025-54392073)
[»] chr5 (61 HSPs)
chr5 (85-213)||(18307251-18307379)
chr5 (85-213)||(542738-542866)
chr5 (89-213)||(11346008-11346133)
chr5 (117-213)||(25497540-25497636)
chr5 (89-200)||(20192354-20192465)
chr5 (142-213)||(35564315-35564386)
chr5 (85-164)||(34122521-34122600)
chr5 (85-213)||(3600333-3600462)
chr5 (85-164)||(7762241-7762320)
chr5 (90-164)||(7017514-7017588)
chr5 (85-163)||(34123933-34124011)
chr5 (85-158)||(28388522-28388595)
chr5 (89-164)||(7757326-7757401)
chr5 (85-164)||(25897076-25897155)
chr5 (85-164)||(41798815-41798894)
chr5 (89-155)||(39743154-39743220)
chr5 (149-211)||(42865754-42865816)
chr5 (85-158)||(5773-5846)
chr5 (111-168)||(19037463-19037520)
chr5 (85-164)||(1035181-1035260)
chr5 (85-164)||(17965846-17965925)
chr5 (85-164)||(17966883-17966962)
chr5 (85-163)||(38968092-38968170)
chr5 (89-158)||(28387270-28387339)
chr5 (107-211)||(7994-8101)
chr5 (118-158)||(4204214-4204254)
chr5 (138-213)||(8537215-8537291)
chr5 (89-157)||(8702202-8702270)
chr5 (88-164)||(25889994-25890070)
chr5 (85-131)||(1397380-1397426)
chr5 (85-142)||(3891480-3891537)
chr5 (85-158)||(18538338-18538411)
chr5 (120-157)||(30354400-30354437)
chr5 (111-168)||(30708926-30708983)
chr5 (116-157)||(41201756-41201797)
chr5 (105-158)||(42539376-42539429)
chr5 (85-141)||(8539536-8539592)
chr5 (85-141)||(13568095-13568151)
chr5 (116-164)||(13837752-13837800)
chr5 (116-164)||(28238167-28238215)
chr5 (116-164)||(30192520-30192568)
chr5 (85-164)||(25877619-25877697)
chr5 (89-164)||(33995145-33995220)
chr5 (89-156)||(34682258-34682325)
chr5 (89-164)||(41799764-41799839)
chr5 (85-131)||(19228676-19228722)
chr5 (116-158)||(38855714-38855756)
chr5 (117-158)||(3603151-3603192)
chr5 (119-164)||(27532614-27532659)
chr5 (111-168)||(28880345-28880402)
chr5 (89-157)||(1398605-1398673)
chr5 (173-213)||(1401388-1401428)
chr5 (85-141)||(11348495-11348551)
chr5 (116-164)||(14280897-14280945)
chr5 (116-164)||(19035266-19035314)
chr5 (124-164)||(27659976-27660016)
chr5 (85-141)||(27867840-27867896)
chr5 (88-156)||(29430022-29430090)
chr5 (88-156)||(29430583-29430651)
chr5 (87-131)||(30887390-30887434)
chr5 (89-141)||(43094596-43094648)
[»] chr7 (56 HSPs)
chr7 (85-211)||(30355189-30355315)
chr7 (104-213)||(40587677-40587786)
chr7 (118-213)||(42682024-42682119)
chr7 (85-213)||(17838647-17838776)
chr7 (85-213)||(41047774-41047902)
chr7 (85-213)||(46863292-46863420)
chr7 (88-210)||(28980123-28980246)
chr7 (135-213)||(36394886-36394964)
chr7 (149-213)||(21188374-21188438)
chr7 (85-164)||(17840887-17840966)
chr7 (144-213)||(28115480-28115549)
chr7 (85-157)||(9494810-9494882)
chr7 (89-165)||(42499410-42499486)
chr7 (85-142)||(5537869-5537926)
chr7 (89-164)||(47776333-47776408)
chr7 (85-155)||(34623386-34623456)
chr7 (147-209)||(43686859-43686921)
chr7 (111-164)||(9367721-9367774)
chr7 (85-158)||(47060924-47060996)
chr7 (85-141)||(618745-618801)
chr7 (149-213)||(34139932-34139996)
chr7 (104-164)||(34738380-34738440)
chr7 (85-157)||(34742399-34742471)
chr7 (87-158)||(10705247-10705318)
chr7 (85-164)||(17834484-17834563)
chr7 (85-140)||(27453615-27453670)
chr7 (154-213)||(45364168-45364227)
chr7 (115-164)||(15070382-15070431)
chr7 (85-154)||(41049196-41049265)
chr7 (160-213)||(48269713-48269766)
chr7 (116-164)||(18105401-18105449)
chr7 (116-164)||(45767858-45767906)
chr7 (85-156)||(7066-7137)
chr7 (85-156)||(12210595-12210666)
chr7 (85-164)||(19044291-19044369)
chr7 (85-164)||(20710267-20710345)
chr7 (92-131)||(34139901-34139940)
chr7 (121-164)||(35606822-35606865)
chr7 (85-144)||(46738799-46738858)
chr7 (116-158)||(11629764-11629806)
chr7 (87-157)||(29592542-29592612)
chr7 (89-155)||(34622500-34622566)
chr7 (89-163)||(37340303-37340377)
chr7 (88-150)||(40140739-40140801)
chr7 (85-131)||(45361646-45361692)
chr7 (88-142)||(47742982-47743036)
chr7 (116-157)||(10098121-10098162)
chr7 (116-157)||(15074232-15074273)
chr7 (119-164)||(20353927-20353972)
chr7 (85-142)||(46908492-46908549)
chr7 (85-158)||(48314670-48314743)
chr7 (116-164)||(9365707-9365755)
chr7 (116-164)||(10098394-10098442)
chr7 (116-164)||(29112401-29112449)
chr7 (116-164)||(30791005-30791053)
chr7 (116-164)||(41884123-41884171)
[»] chr6 (53 HSPs)
chr6 (85-213)||(12783905-12784033)
chr6 (85-213)||(13401483-13401611)
chr6 (90-164)||(11840247-11840321)
chr6 (85-158)||(32643524-32643597)
chr6 (88-164)||(31146373-31146449)
chr6 (85-164)||(13388705-13388784)
chr6 (85-164)||(31768750-31768829)
chr6 (88-164)||(28362728-28362804)
chr6 (85-164)||(2051026-2051104)
chr6 (85-164)||(29076320-29076399)
chr6 (85-164)||(29109853-29109932)
chr6 (85-164)||(29111293-29111372)
chr6 (111-168)||(6204850-6204907)
chr6 (111-168)||(11691817-11691874)
chr6 (85-130)||(29061293-29061338)
chr6 (111-167)||(22305131-22305187)
chr6 (149-213)||(29061331-29061395)
chr6 (85-147)||(25554702-25554764)
chr6 (151-213)||(29065791-29065853)
chr6 (151-213)||(29074804-29074866)
chr6 (151-213)||(29079568-29079630)
chr6 (151-213)||(29107377-29107439)
chr6 (85-158)||(23958887-23958960)
chr6 (85-130)||(29065737-29065782)
chr6 (85-130)||(29074750-29074795)
chr6 (85-130)||(29079514-29079559)
chr6 (85-130)||(29107323-29107368)
chr6 (88-164)||(8193206-8193282)
chr6 (118-211)||(30258263-30258358)
chr6 (105-164)||(31771738-31771797)
chr6 (85-142)||(2109514-2109571)
chr6 (85-158)||(16192766-16192839)
chr6 (115-164)||(26712075-26712124)
chr6 (116-164)||(13382657-13382705)
chr6 (88-156)||(14012380-14012448)
chr6 (85-141)||(18347038-18347094)
chr6 (116-164)||(28249913-28249961)
chr6 (149-213)||(32034340-32034404)
chr6 (85-164)||(9048072-9048151)
chr6 (85-164)||(32223510-32223589)
chr6 (116-158)||(18606072-18606114)
chr6 (115-164)||(11694024-11694073)
chr6 (85-158)||(15888803-15888876)
chr6 (121-158)||(18351646-18351683)
chr6 (116-157)||(24088790-24088831)
chr6 (116-164)||(6207057-6207105)
chr6 (116-164)||(9049081-9049129)
chr6 (121-157)||(24721962-24721998)
chr6 (116-164)||(26351093-26351141)
chr6 (116-156)||(26712228-26712268)
chr6 (170-206)||(26855977-26856013)
chr6 (116-164)||(27616743-27616791)
chr6 (116-164)||(27641715-27641763)
[»] chr2 (73 HSPs)
chr2 (85-211)||(41500184-41500310)
chr2 (116-207)||(10365746-10365837)
chr2 (94-213)||(39393043-39393162)
chr2 (85-213)||(34638138-34638262)
chr2 (89-213)||(24512168-24512292)
chr2 (89-213)||(43491110-43491234)
chr2 (140-213)||(2920464-2920537)
chr2 (123-213)||(2648152-2648242)
chr2 (119-213)||(29093779-29093870)
chr2 (85-164)||(3943189-3943268)
chr2 (85-164)||(7189948-7190027)
chr2 (85-164)||(23346777-23346856)
chr2 (89-158)||(28477070-28477139)
chr2 (85-164)||(3795334-3795413)
chr2 (85-164)||(23347325-23347404)
chr2 (85-164)||(27276371-27276450)
chr2 (111-168)||(17424155-17424212)
chr2 (85-149)||(1149469-1149533)
chr2 (88-164)||(25184827-25184902)
chr2 (93-164)||(24754021-24754092)
chr2 (150-213)||(40679545-40679608)
chr2 (85-164)||(41183221-41183299)
chr2 (87-158)||(45137436-45137507)
chr2 (111-164)||(43982222-43982275)
chr2 (116-164)||(82259-82307)
chr2 (85-141)||(1101072-1101128)
chr2 (85-141)||(38945759-38945815)
chr2 (116-164)||(43943717-43943765)
chr2 (87-158)||(435342-435412)
chr2 (85-140)||(3803564-3803619)
chr2 (99-154)||(25964822-25964877)
chr2 (105-164)||(29397927-29397986)
chr2 (85-156)||(45475437-45475508)
chr2 (85-131)||(20951076-20951122)
chr2 (85-147)||(36510870-36510932)
chr2 (85-142)||(1096592-1096649)
chr2 (85-158)||(10825215-10825288)
chr2 (85-158)||(19187226-19187299)
chr2 (85-142)||(30803037-30803094)
chr2 (85-158)||(34639317-34639390)
chr2 (85-158)||(41008931-41009003)
chr2 (85-157)||(2917680-2917752)
chr2 (161-213)||(16580559-16580611)
chr2 (116-164)||(22003398-22003446)
chr2 (145-213)||(26858170-26858238)
chr2 (116-164)||(28468669-28468717)
chr2 (104-164)||(30273147-30273207)
chr2 (90-158)||(34921762-34921830)
chr2 (92-156)||(41497476-41497540)
chr2 (88-164)||(42177211-42177287)
chr2 (85-153)||(43870129-43870197)
chr2 (85-156)||(39489180-39489251)
chr2 (85-164)||(41004526-41004604)
chr2 (122-164)||(43536136-43536178)
chr2 (111-164)||(3937849-3937902)
chr2 (123-164)||(5351729-5351770)
chr2 (85-158)||(12908432-12908505)
chr2 (116-157)||(18000260-18000301)
chr2 (85-158)||(23409504-23409577)
chr2 (85-158)||(23786121-23786194)
chr2 (104-157)||(30271090-30271143)
chr2 (91-164)||(35490683-35490756)
chr2 (85-158)||(35493344-35493417)
chr2 (118-158)||(2271740-2271780)
chr2 (116-164)||(7267441-7267489)
chr2 (88-156)||(10424839-10424907)
chr2 (116-156)||(14456530-14456570)
chr2 (116-164)||(33222644-33222692)
chr2 (123-175)||(35490741-35490793)
chr2 (116-164)||(39947627-39947675)
chr2 (116-164)||(41053565-41053613)
chr2 (116-164)||(42499814-42499862)
chr2 (116-156)||(44100803-44100843)
[»] scaffold0199 (2 HSPs)
scaffold0199 (85-213)||(12335-12464)
scaffold0199 (85-165)||(10649-10729)
[»] chr4 (75 HSPs)
chr4 (85-198)||(1041932-1042045)
chr4 (105-213)||(56138269-56138377)
chr4 (89-213)||(958542-958665)
chr4 (91-213)||(44561278-44561400)
chr4 (85-165)||(9889991-9890071)
chr4 (85-211)||(28081455-28081582)
chr4 (149-213)||(34154376-34154440)
chr4 (85-164)||(15995719-15995798)
chr4 (85-164)||(19069184-19069263)
chr4 (85-164)||(21022885-21022964)
chr4 (116-195)||(29700268-29700347)
chr4 (85-164)||(15999796-15999875)
chr4 (85-164)||(16984158-16984237)
chr4 (85-164)||(51492068-51492147)
chr4 (85-158)||(39590571-39590644)
chr4 (135-213)||(42885496-42885576)
chr4 (111-211)||(21017951-21018054)
chr4 (149-213)||(34530743-34530807)
chr4 (149-213)||(39588127-39588191)
chr4 (135-200)||(4786295-4786360)
chr4 (111-168)||(6178103-6178160)
chr4 (85-158)||(16983519-16983592)
chr4 (111-168)||(49094107-49094164)
chr4 (111-211)||(55793943-55794047)
chr4 (87-163)||(41023385-41023461)
chr4 (149-213)||(51429277-51429341)
chr4 (149-213)||(56304911-56304975)
chr4 (87-158)||(955791-955862)
chr4 (85-140)||(50274757-50274812)
chr4 (96-163)||(55407791-55407858)
chr4 (149-211)||(6283417-6283479)
chr4 (85-131)||(39588089-39588135)
chr4 (116-157)||(38464770-38464811)
chr4 (111-168)||(41795349-41795406)
chr4 (89-142)||(50278817-50278870)
chr4 (85-141)||(3403844-3403900)
chr4 (102-158)||(37022064-37022120)
chr4 (85-164)||(21015736-21015815)
chr4 (85-156)||(40833615-40833686)
chr4 (85-156)||(50447005-50447076)
chr4 (90-164)||(8109393-8109467)
chr4 (116-158)||(11494571-11494613)
chr4 (104-158)||(19073658-19073712)
chr4 (116-158)||(20208538-20208580)
chr4 (118-164)||(38460456-38460502)
chr4 (122-163)||(67626-67667)
chr4 (85-142)||(38369201-38369258)
chr4 (85-141)||(1044539-1044595)
chr4 (85-141)||(21472504-21472560)
chr4 (116-164)||(30726738-30726786)
chr4 (116-164)||(31425315-31425363)
chr4 (90-158)||(34151616-34151684)
chr4 (116-164)||(37563277-37563325)
chr4 (116-164)||(39773432-39773480)
chr4 (116-164)||(40358277-40358325)
chr4 (94-158)||(48256571-48256635)
chr4 (89-157)||(49572904-49572972)
chr4 (116-164)||(54634012-54634060)
chr4 (123-158)||(72510-72545)
chr4 (85-156)||(14200558-14200629)
chr4 (85-164)||(44051089-44051168)
chr4 (85-156)||(46254453-46254524)
chr4 (85-156)||(51037473-51037544)
chr4 (88-158)||(17342142-17342212)
chr4 (85-131)||(34154432-34154478)
chr4 (149-210)||(243296-243357)
chr4 (87-156)||(23220677-23220746)
chr4 (123-164)||(26932619-26932660)
chr4 (89-158)||(51426538-51426607)
chr4 (115-156)||(52529240-52529281)
chr4 (116-164)||(1089581-1089629)
chr4 (116-164)||(6175905-6175953)
chr4 (118-158)||(37959723-37959763)
chr4 (116-164)||(41793392-41793440)
chr4 (116-164)||(49169094-49169142)
[»] chr1 (85 HSPs)
chr1 (85-213)||(13972061-13972187)
chr1 (116-213)||(42572705-42572802)
chr1 (138-213)||(29763167-29763242)
chr1 (95-213)||(6434755-6434873)
chr1 (88-158)||(44336249-44336319)
chr1 (85-158)||(6557912-6557985)
chr1 (85-158)||(52802127-52802200)
chr1 (116-200)||(49395631-49395715)
chr1 (85-164)||(6562158-6562237)
chr1 (85-164)||(44470008-44470087)
chr1 (149-213)||(27487614-27487678)
chr1 (85-164)||(15047279-15047358)
chr1 (85-164)||(19161889-19161968)
chr1 (119-213)||(29435004-29435097)
chr1 (111-211)||(19159646-19159750)
chr1 (88-164)||(9711648-9711724)
chr1 (89-157)||(11183187-11183255)
chr1 (149-213)||(14174859-14174923)
chr1 (85-164)||(23359346-23359425)
chr1 (85-164)||(48751407-48751486)
chr1 (119-213)||(13147527-13147621)
chr1 (85-159)||(23276110-23276184)
chr1 (149-211)||(49927451-49927513)
chr1 (160-213)||(26637204-26637257)
chr1 (85-158)||(51271594-51271667)
chr1 (111-167)||(13636116-13636172)
chr1 (85-157)||(41804037-41804109)
chr1 (104-164)||(50617219-50617281)
chr1 (85-163)||(35258870-35258948)
chr1 (85-206)||(24364680-24364801)
chr1 (85-158)||(46141779-46141852)
chr1 (85-158)||(51289963-51290036)
chr1 (116-164)||(38689959-38690007)
chr1 (149-213)||(44596896-44596960)
chr1 (85-156)||(586610-586681)
chr1 (85-164)||(2425682-2425761)
chr1 (115-158)||(19054253-19054296)
chr1 (85-156)||(30194418-30194489)
chr1 (115-158)||(36072396-36072439)
chr1 (85-164)||(46886385-46886463)
chr1 (151-213)||(49426750-49426813)
chr1 (106-164)||(9710596-9710654)
chr1 (85-131)||(51288884-51288930)
chr1 (119-164)||(1656086-1656131)
chr1 (94-155)||(7981145-7981206)
chr1 (85-158)||(8460100-8460172)
chr1 (89-158)||(19499115-19499184)
chr1 (85-158)||(22345258-22345330)
chr1 (85-142)||(30910022-30910079)
chr1 (115-164)||(46216425-46216474)
chr1 (116-164)||(3728763-3728811)
chr1 (116-164)||(3944002-3944050)
chr1 (116-164)||(3993840-3993888)
chr1 (116-164)||(8548666-8548714)
chr1 (104-164)||(19521625-19521685)
chr1 (85-141)||(20349454-20349510)
chr1 (85-141)||(41453835-41453891)
chr1 (163-211)||(44338216-44338264)
chr1 (85-157)||(49927517-49927589)
chr1 (89-156)||(4883234-4883301)
chr1 (91-158)||(26633530-26633597)
chr1 (85-164)||(46217315-46217394)
chr1 (87-158)||(46973203-46973273)
chr1 (116-158)||(15051351-15051393)
chr1 (85-147)||(19914463-19914525)
chr1 (116-158)||(26879298-26879340)
chr1 (85-131)||(27485056-27485102)
chr1 (163-213)||(29709259-29709309)
chr1 (85-131)||(30905768-30905814)
chr1 (85-131)||(49857879-49857925)
chr1 (87-133)||(51337541-51337587)
chr1 (88-164)||(3941147-3941223)
chr1 (85-158)||(6437542-6437615)
chr1 (85-158)||(29438023-29438096)
chr1 (85-142)||(29765548-29765605)
chr1 (121-158)||(38119614-38119651)
chr1 (107-164)||(44598903-44598960)
chr1 (160-213)||(51269010-51269063)
chr1 (85-142)||(52805552-52805609)
chr1 (161-209)||(4208454-4208502)
chr1 (116-164)||(20353932-20353980)
chr1 (85-157)||(25040080-25040152)
chr1 (116-164)||(29424408-29424456)
chr1 (116-164)||(29622421-29622469)
chr1 (116-164)||(38771657-38771705)
[»] scaffold0494 (3 HSPs)
scaffold0494 (85-164)||(828-907)
scaffold0494 (116-164)||(5359-5407)
scaffold0494 (123-164)||(892-933)
[»] scaffold0341 (1 HSPs)
scaffold0341 (85-164)||(17348-17427)
[»] scaffold0201 (1 HSPs)
scaffold0201 (85-164)||(22400-22479)
[»] scaffold1379 (1 HSPs)
scaffold1379 (85-156)||(439-510)
[»] scaffold0192 (1 HSPs)
scaffold0192 (142-213)||(18847-18918)
[»] scaffold0116 (2 HSPs)
scaffold0116 (85-156)||(15960-16031)
scaffold0116 (85-130)||(11298-11343)
[»] scaffold0012 (1 HSPs)
scaffold0012 (98-164)||(232829-232895)
[»] scaffold0618 (1 HSPs)
scaffold0618 (85-154)||(3882-3951)
[»] scaffold0219 (1 HSPs)
scaffold0219 (88-164)||(20109-20185)
[»] scaffold0794 (1 HSPs)
scaffold0794 (85-164)||(5269-5347)
[»] scaffold0361 (1 HSPs)
scaffold0361 (85-164)||(4397-4476)
[»] scaffold0513 (1 HSPs)
scaffold0513 (85-158)||(8196-8269)
[»] scaffold0184 (2 HSPs)
scaffold0184 (85-158)||(18296-18369)
scaffold0184 (89-156)||(18032-18099)
[»] scaffold0078 (2 HSPs)
scaffold0078 (85-158)||(54475-54548)
scaffold0078 (89-156)||(54745-54812)
[»] scaffold0176 (2 HSPs)
scaffold0176 (149-213)||(857-921)
scaffold0176 (92-131)||(826-865)
[»] scaffold0101 (2 HSPs)
scaffold0101 (111-167)||(36528-36584)
scaffold0101 (116-164)||(41019-41067)
[»] scaffold0340 (1 HSPs)
scaffold0340 (85-164)||(1178-1256)
[»] scaffold0065 (1 HSPs)
scaffold0065 (115-164)||(65345-65394)
[»] scaffold1500 (1 HSPs)
scaffold1500 (88-164)||(756-832)
[»] scaffold0744 (1 HSPs)
scaffold0744 (116-164)||(420-468)
[»] scaffold0293 (1 HSPs)
scaffold0293 (116-164)||(719-767)
[»] scaffold0260 (1 HSPs)
scaffold0260 (85-141)||(11777-11833)
[»] scaffold0038 (1 HSPs)
scaffold0038 (116-164)||(50075-50123)
[»] scaffold0388 (1 HSPs)
scaffold0388 (89-156)||(13009-13076)
[»] scaffold0016 (1 HSPs)
scaffold0016 (85-156)||(69226-69297)
[»] scaffold0180 (1 HSPs)
scaffold0180 (85-158)||(15625-15698)
[»] scaffold0014 (1 HSPs)
scaffold0014 (116-164)||(84608-84656)
[»] scaffold0011 (1 HSPs)
scaffold0011 (122-158)||(235933-235969)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 26451482 - 26451601
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataag 189  Q
    |||||||||| || |||||||||||||||||| ||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||    
T  26451482 agttaactgctgaggaattagaaattcggctgtagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaag 26451581  T
Q  190 ctctctcatctattattcat 209  Q
    ||||||||||||||||||||    
T  26451582 ctctctcatctattattcat 26451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 42602457 - 42602583
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |||||  |||  ||| |||||||||||| | |||||||||||||||||||||||| ||||||||| || |||||||||| |    
T  42602457 tcggcagttaactgccgaagaattcaaaaaccggatgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgatacaaatctgac 42602556  T
Q  185 ataagctctctcatctattattcatct 211  Q
    ||||| | ||||||| |||||||||||    
T  42602557 ataagttgtctcatccattattcatct 42602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 41858197 - 41858073
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||| ||| |||||  |||  |||||||||||||||| | |||||  |||||| |||||||||  ||||||||| |||||||||||||||    
T  41858197 tcggcagttaactggcgaagaattcaaaaaccggctgcagttaactgccgaggaa--cctcgggagttaactgtcgaggatcttctgctacaaatctggc 41858100  T
Q  185 ataagctctctcatctattattcatct 211  Q
    | ||||||||||||| |||||||||||    
T  41858099 agaagctctctcatccattattcatct 41858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 18441479 - 18441389
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||| | || |||||||||| |||||||||| ||||||||| |||||||||||||||| || |||||||||| |||||||||||||    
T  18441479 agttaactgccgagaaaaacctcggcagttaactgccgaggatcttctgctacaaatctggcagaaactctctcatccattattcatctca 18441389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 22550941 - 22550862
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  22550941 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 22550862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 34823092 - 34823014
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||||||||||||| ||| |||||| |||| ||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  34823092 tcggcagttaactgtcgaggaattaaaaatacggctgcagttaattgtcgaggaaaacctcggtagttaactgccgagg 34823014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 41274625 - 41274717
Alignment:
Q  121 gcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||| || | ||||||| |||||||||||||||| ||| ||||| | ||| |||||||||| ||||||||||||| |||||||||||||    
T  41274625 gcagttaattgccgaggaaaatctcggtagttaactgccgagaatcttctactataaatctggcagaagctctctcatccattattcatctca 41274717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 1114740 - 1114818
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    ||||||||||||||||||  |||| ||||| |||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  1114740 tcggcagttaactgccgagaaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagg 1114818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 35962304 - 35962383
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| ||| ||||| ||||| ||||| |||||||||| | ||||||||||||| |||||||||| |||||    
T  35962304 tcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaacctcgggagttaactgccgagga 35962383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 39601705 - 39601780
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| |  |||||||| |||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  39601705 cagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 39601780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 41855365 - 41855436
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||| ||| |||||  ||| ||||||||||||||||| | ||||||||||||||||||||||    
T  41855365 tcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaact 41855436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 15033197 - 15033095
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatct-tttgctacaaatctggcataagct-ctctcatctattattca 208  Q
    ||||||||||||| ||||||| | ||| |||||||||||||||||||| |||||||| |   |||||||||||||| || || |||||||| ||||||||    
T  15033197 aaattcggctgcaattaactgccgagggaaacctcggtagttaactgccgaggatctctgacctacaaatctggcagaatctcctctcatccattattca 15033098  T
Q  209 tct 211  Q
    |||    
T  15033097 tct 15033095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 18205783 - 18205856
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||| |||||||||||| |||||  |||  |||||||||||||||| | ||||||||||||||||||||||||    
T  18205783 tcggcggttaactgccgaagaattcaaaaaccggctgcagttaactgccaaggaaaacctcggtagttaactgc 18205856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 3395927 - 3395991
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| |||||||||| ||||| || |||||||||| |||||||||||||    
T  3395927 agttaactgccgaggatcttctgctacaaatatggcagaaactctctcatccattattcatctca 3395991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 22547504 - 22547568
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||| | ||||||||| | |||||||||||||| ||||||||||||| |||||||||||||    
T  22547504 agttaactaccgaggatcttctactacaaatctggcagaagctctctcatcaattattcatctca 22547568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 35966825 - 35966753
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||||| ||||| ||||| || |||||||||| |||| | |||| ||||||||||||||||    
T  35966825 tcggcagttaactgccgaggaatttgaaatccgactgcagttaattgtcgaagaaatcctcggtagttaactg 35966753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 24860448 - 24860507
Alignment:
Q  154 actgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||| ||||| |||| || || |||||||||||||||||||||||||||    
T  24860448 actgcggaggatcttctgctataaatttgacagaagctctctcatctattattcatctca 24860507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 20549308 - 20549263
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  20549308 tcggcagttaactgccgaggaatttgaaattcggctgcagttaact 20549263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 22577662 - 22577735
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| ||| || |||||  ||| | || |||||||||||||| ||||||||||||||||||||||||    
T  22577662 tcggcagttaattgctgaggaattcaaaaattggttgcagttaactgtcgaggaaaacctcggtagttaactgc 22577735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 34366912 - 34366981
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| |  ||| |||| |||||||||||||||  | ||||||||||||||||||||||||    
T  34366912 cagttaactgccgaagttttataaatccggctgcagttaacttccgaggaaaacctcggtagttaactgc 34366981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 42605310 - 42605237
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| ||| |||||  ||| ||||||||||||||||| | | |||||| |||||||||||||||    
T  42605310 tcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgatgaaaacatcggtagttaactgc 42605237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 2335224 - 2335153
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||| |||| |  |||||||| |||||||||||||||| | |||||||| |||||||| ||||    
T  2335224 tcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggtagtaaact 2335153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 39939269 - 39939218
Alignment:
Q  107 ttagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||| |||||||||||||||| | |||||||||| |||||||||||||    
T  39939269 ttagaaatccggctgcagttaactgccaaggaaaacctaggtagttaactgc 39939218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 41016415 - 41016490
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||| |||| |  |||||||| |  ||||||||||||| | |||||||||||||||||||||||| |||||    
T  41016415 cagttaactaccgaagttttagaaatccaactgcagttaactgccgaggaaaacctcggtagttaactgccgagga 41016490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 2147029 - 2146960
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||  ||||| ||||  |||||||||| ||||| | ||||||||||||||||||||||||    
T  2147029 gcagttaactgccggggaatttgaaac-cggctgcagtaaactgccgaggaaaacctcggtagttaactgc 2146960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 41276936 - 41276890
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||    
T  41276936 tcggcagttaactgttgaggaattagaaattcggctgcagttaactg 41276890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 3641659 - 3641716
Alignment:
Q  101 gatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||| ||||||||||||||||||   ||||||||||||| | ||||||||    
T  3641659 gatgaattagaacttcggctgcagttaactgctgaggaaaacctcgggaattaactgc 3641716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 28617565 - 28617622
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | ||||||||    
T  28617565 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 28617622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 38873002 - 38872933
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||| |||| |||||  |||  |||||||||||||||| | ||||||||||||||| ||||||||    
T  38873002 cagttaactaccgaggaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtaattaactgc 38872933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 40077305 - 40077248
Alignment:
Q  106 attagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||| |||| || ||||||||||||| | |||||||||||||||||||||||| ||||    
T  40077305 attaaaaatccgactgcagttaactgccgaggaaaacctcggtagttaactgccgagg 40077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 44933856 - 44933913
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | ||||||||    
T  44933856 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 44933913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 184597 - 184549
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  184597 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 546490 - 546418
Alignment:
Q  92 ttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |  ||||||||||||||   |||||||| | ||||||||||||| |||||||||| |||||    
T  546490 ttaactgccgaagttttagaaattcggctattgttaactgccgaggaaaacctcgggagttaactgctgagga 546418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 5533098 - 5533030
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  5533098 gcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 5533030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 8419432 - 8419480
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  8419432 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 8419480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 21406267 - 21406343
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| |||||   ||  |||||||||||||||  | |||||||| ||||||||||||||| |||||    
T  21406267 gcagttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 21406343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 21800759 - 21800835
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| |||||   ||  |||||||||||||||  | |||||||| ||||||||||||||| |||||    
T  21800759 gcagttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 21800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 26663078 - 26663030
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  26663078 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 26663030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 28646320 - 28646252
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||| |||||| |||||  ||| ||||||||||||||||| | |||||||| |||| ||||||||    
T  28646320 gcagttaattgccgaggaatttaaaaatcggctgcagttaactgccgaggaaaacttcggcagttaact 28646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 28650904 - 28650836
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||| |||||| |||||  ||| ||||||||||||||||| | |||||||| |||| ||||||||    
T  28650904 gcagttaattgccgaggaatttaaaaatcggctgcagttaactgccgaggaaaacttcggcagttaact 28650836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 32375679 - 32375727
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  32375679 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 32375727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 39751073 - 39751132
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcgg 147  Q
    |||| ||||||||||||||||| ||||  |||||||||||||||| | |||||||||||||    
T  39751073 ggcaattaactgccgatgaatttgaaac-cggctgcagttaactgccgaggaaaacctcgg 39751132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 43679396 - 43679467
Alignment:
Q  86 cggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||| ||| |||||| ||||| ||||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  43679396 cggcagctaaatgccgaggaattcgaaac-cggctgcagttaattgttaaggaaaacctcggtagttaactgc 43679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 27501597 - 27501668
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||| |||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  27501597 tcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 27501668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 28645371 - 28645450
Alignment:
Q  86 cggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggat 165  Q
    ||||||||||||||||| |||||| |||  ||| ||||||||| |||| || ||||| ||||  ||||||||| ||||||    
T  28645371 cggcagttaactgccgaggaattaaaaacacggttgcagttaattgtcgagaaaaacttcggccgttaactgccgaggat 28645450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 28649955 - 28650034
Alignment:
Q  86 cggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggat 165  Q
    ||||||||||||||||| |||||| |||  ||| ||||||||| |||| || ||||| ||||  ||||||||| ||||||    
T  28649955 cggcagttaactgccgaggaattaaaaacacggttgcagttaattgtcgagaaaaacttcggccgttaactgccgaggat 28650034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 32383251 - 32383208
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||  | ||||||||||||||||||||||||    
T  32383251 tcggctgcagttaactaccgaggaaaacctcggtagttaactgc 32383208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 32437206 - 32437163
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||  | ||||||||||||||||||||||||    
T  32437206 tcggctgcagttaactaccgaggaaaacctcggtagttaactgc 32437163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 38604320 - 38604253
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  38604320 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 38604253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 38871834 - 38871885
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatct 200  Q
    ||||||||||  |||||||| ||||||||||||||||  |||||||||||||    
T  38871834 agttaactgccaaggatcttctgctacaaatctggcaggagctctctcatct 38871885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 44052302 - 44052231
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||| |||||| |||||| ||||| | ||| |||||||||||| ||  | ||||||||||||||||||||||    
T  44052302 tcggtagttaattgccgaggaatttgcaatccggctgcagttacctaccgaggaaaacctcggtagttaact 44052231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 1116264 - 1116218
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||| ||| ||||| ||||| ||||||||||||||||    
T  1116264 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactg 1116218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 18438662 - 18438704
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| | ||||||||||||| ||||||||||    
T  18438662 cggctgcagttaactgccgaggaaaacctcgggagttaactgc 18438704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 34235199 - 34235153
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||||| |  |||||||||||||| ||||||||||    
T  34235199 tcggcagttaactgccgaagttttagaaattcggctacagttaactg 34235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 36677974 - 36677932
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  36677974 cggcggcagttaactgccgaggaaaacctcggtagttaactgc 36677932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 43262451 - 43262497
Alignment:
Q  118 gctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| | |||||||| ||||||||||||||| |||||    
T  43262451 gctgcagttaactgccgaggaaaacttcggtagttaactgccgagga 43262497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 45454403 - 45454449
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  45454403 tcggcagttaactgccgaggaatttgaaatccggatgcagttaactg 45454449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 7168091 - 7168152
Alignment:
Q  91 gttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagtt 152  Q
    |||| ||||||| |||||  |||  |||||||||||||||| | ||||||||||||||||||    
T  7168091 gttagctgccgaagaattcaaaaaccggctgcagttaactgccgaggaaaacctcggtagtt 7168152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 22547466 - 22547511
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||    
T  22547466 tcggcagttaactgccgaagttttagaaatccggctgcagttaact 22547511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 40740934 - 40740983
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggat 165  Q
    |||||||||||||||| | |||||||| |||| |||||||||| ||||||    
T  40740934 cggctgcagttaactgccgaggaaaacttcggcagttaactgccgaggat 40740983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 41743892 - 41743933
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||    
T  41743892 agttaactgccgaggaatttgaaatccggctgcagttaactg 41743933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 483844 - 483892
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  483844 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 483892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 7344602 - 7344554
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  7344602 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 7344554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 15030912 - 15030960
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  15030912 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 15030960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 17924328 - 17924280
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | || ||||||||||||||||||||| |||||    
T  17924328 cggcggcagttaactgccgagaaaaacctcggtagttaactgccgagga 17924280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 22014274 - 22014314
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  22014274 cggcggcagttaactgccgaggaaaacctcggtagttaact 22014314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 22519607 - 22519559
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  22519607 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 22519559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 45066406 - 45066358
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||||| |||||||| |||||    
T  45066406 cggcggcagttaactgccgaggaaaacctcggtaattaactgccgagga 45066358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 100)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 41802995 - 41803121
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |||||  |||  |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41802995 tcggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttttgctacaaatctggc 41803094  T
Q  185 ataagctctctcatctattattcatct 211  Q
    | ||||||||||||| |||||||||||    
T  41803095 agaagctctctcatccattattcatct 41803121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 34694510 - 34694382
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||| ||| ||||||||||| |||||||||| ||||| | || |||||||||| |||||||||| ||||||||| |||||||||||||||    
T  34694510 tcggcagttaactgtcgaggaattagaaatccggctgcagtaaactgccgagaaaaacctcgggagttaactgccgaggatcttctgctacaaatctggc 34694411  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | ||||||||||||| |||||||||||||    
T  34694410 agaagctctctcatccattattcatctca 34694382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 55385134 - 55385262
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  55385134 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgctacaaatctggc 55385233  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | ||||||||||||| |||||| ||||||    
T  55385234 agaagctctctcatccattattaatctca 55385262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 43476188 - 43476317
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattc-ggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctgg 183  Q
    |||| ||||||||||||| |  ||||||| || ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||     
T  43476188 tcggaagttaactgccgaagttttagaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttttgctacaaatctga 43476287  T
Q  184 cataagctctctcatctattattcatctca 213  Q
    || ||||||||||||| |||||||||||||    
T  43476288 cagaagctctctcatccattattcatctca 43476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 55207739 - 55207613
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |||||  |||  ||| |||||||||||| |||||| ||||| ||||||||||||| ||||||||| |||||||||||||||    
T  55207739 tcggcagttaactgccgaagaattcaaaaaccggttgcagttaactgcctaggacaaccttggtagttaactgccgaggatcttctgctacaaatctggc 55207640  T
Q  185 ataagctctctcatctattattcatct 211  Q
    | ||||||||||||| |||||||||||    
T  55207639 agaagctctctcatccattattcatct 55207613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 49219867 - 49219739
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||| | |||||||||| |||||||||||   ||||||||| |||||||||| || |    
T  49219867 tcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaaccttggtagttaactatcgaggatcttctgctacaaatttgac 49219768  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | |||||||| |||| |||||||||||||    
T  49219767 agaagctctcccatccattattcatctca 49219739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 49609385 - 49609508
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataag 189  Q
    |||||| || ||| ||||| |||||||||| |||||||| |||| || ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  49609385 agttaattgtcgaggaatttgaaattcggccgcagttaattgtcgagaaaaacctcggtagttaactgccgaggaacttctgctacaaatctggcataag 49609484  T
Q  190 ctctctcatctattattcatctca 213  Q
    |||||| ||  |||||||||||||    
T  49609485 ctctcttattcattattcatctca 49609508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 13896920 - 13896824
Alignment:
Q  117 ggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||| || | |||||||||||||| ||||||||||||| |||||||||||||    
T  13896920 ggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaagattttctactacaaatctggcagaagctctctcatccattattcatctca 13896824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 41577076 - 41577200
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataa 188  Q
    |||||||||| |||||||||| ||| |||| |||||||||||||| |  ||||| |||||||| |||||| ||||||||| |||||||||||| ||| ||    
T  41577076 cagttaactgtcgatgaattaaaaaatcggttgcagttaactgtcgacaaaaacttcggtagtaaactgccgaggatcttctgctacaaatcttgcagaa 41577175  T
Q  189 gctctctcatctattattcatctca 213  Q
    ||||||||||| ||||| |||||||    
T  41577176 gctctctcatccattatccatctca 41577200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 51402436 - 51402348
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatct 211  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||| |||||||||||    
T  51402436 agttaactgtcgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctgtcagaagctctctcatccattattcatct 51402348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 4004879 - 4004750
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||| |||||| |||||| |  |||||||| |||||||||||||||| | ||||||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  4004879 tcggtagttaattgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtacttaactgccgaggatcttctgctacaaacctggc 4004780  T
Q  185 ataagct-ctctcatctattattcatctca 213  Q
    | || || |||||||| |||||||||||||    
T  4004779 agaatctcctctcatccattattcatctca 4004750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 52570642 - 52570514
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |||||  |||  || ||||||||||||  | || ||||||||||||||||||||| ||||||||| | |||||||||||||    
T  52570642 tcggcagttaactgccgaagaattcaaaaaccgactgcagttaactaccgagaaaaacctcggtagttaactgccgaggatcttctactacaaatctggc 52570543  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | || |||||||||  |||||||||||||    
T  52570542 agaaactctctcattcattattcatctca 52570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 24703491 - 24703377
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    ||||||||||||| |||| |  |||||||||||| |||||||||||| | |||||| |||| | |||||||||| || |||||| |||||||||||||||    
T  24703491 tcggcagttaactaccgaagttttagaaattcggatgcagttaactgccgaggaaatcctcaggagttaactgccgatgatcttctgctacaaatctggc 24703392  T
Q  185 ataagctctctcatc 199  Q
    | |||||||||||||    
T  24703391 agaagctctctcatc 24703377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 2271389 - 2271260
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||| ||| |  |||||||| |||||||||||||||| | ||| || |||||| |||||||||| ||||||||| |||||||||||||||    
T  2271389 tcggcagttaactgtcgaagttttagaaatccggctgcagttaactgccgagggaatcctcgggagttaactgccgaggatcttctgctacaaatctggc 2271290  T
Q  185 ataagct-ctctcatctattattcatctca 213  Q
    | || || |||||||| || ||||||||||    
T  2271289 agaatctcctctcatccataattcatctca 2271260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 36134320 - 36134449
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||| |||||||| |||| |  |||||||| || ||||||||||||| | ||||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  36134320 tcggaagttaactaccgaagttttagaaatccgtctgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgctacaaatctggc 36134419  T
Q  185 ataagct-ctctcatctattattcatctca 213  Q
    | || || |||| ||| |||||||||||||    
T  36134420 agaatctcctcttatccattattcatctca 36134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 34691622 - 34691701
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||| || |||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  34691622 tcggcagttaactgccgaggaaataaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 34691701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 2743395 - 2743474
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  2743395 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 2743474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 45101863 - 45101796
Alignment:
Q  146 ggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  45101863 ggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatatattattcatctca 45101796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 48246409 - 48246488
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| || |  |||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  48246409 tcggcagttaactgctgaagttttagaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 48246488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 51696593 - 51696522
Alignment:
Q  142 cctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||    
T  51696593 cctcggtagttaactgccgaggatcttctgctgcaaatctggcagaagctctctcatccattattcatctca 51696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 9429925 - 9429846
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| |||||| |||||||||||| |  | |||||||||||||||||||||||| |||||    
T  9429925 tcggcagttaactgccgaggaatttgaaatttggctgcagttaagtaccgaggaaaacctcggtagttaactgccgagga 9429846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 13747794 - 13747716
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||   ||||||||||| |||||||||||| |||||    
T  13747794 tcggcagttaactgccgatgaatttgaaatccggctgcagttaactgctgaggaaaacctc-gtagttaactgccgagga 13747716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 19341670 - 19341591
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  | |||||||| |||| |||||||||| |||||    
T  19341670 tcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaacttcggcagttaactgccgagga 19341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 20918080 - 20918009
Alignment:
Q  92 ttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||||||||||||||||| |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||    
T  20918080 ttaactgccgatgaattaaaaatccggctacagttaactgccgaggaaaacctcggtagttaactgccgagg 20918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 20927042 - 20926971
Alignment:
Q  92 ttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||||||||||||||||| |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||    
T  20927042 ttaactgccgatgaattaaaaatccggctacagttaactgccgaggaaaacctcggtagttaactgccgagg 20926971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 41137718 - 41137829
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcata 187  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||||          |||| | ||||||||| |||||||||||||||| |    
T  41137718 gcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac----------aactaccgaggatcttctgctacaaatctggcaga 41137807  T
Q  188 agctctctcatctattattcat 209  Q
    |||||||||||| |||||||||    
T  41137808 agctctctcatccattattcat 41137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 19454363 - 19454299
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| | |||||||||||||| ||||||||||||| |||||||||||||    
T  19454363 agttaactgccgaggatcttctactacaaatctggcagaagctctctcatccattattcatctca 19454299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 34648249 - 34648150
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaa--tctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||   | ||||||||||||| ||| || ||| ||||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||    
T  34648249 cggctgcagttaacgaccgaggaaaacctcggcagtaaattgctgaggatcttatgctacaaaattctggcagaagctctctcatccattattcatctca 34648150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 600616 - 600541
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| |  || ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  600616 cagttaactgccgaagttttggaaatccggccgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 4002581 - 4002502
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||| | || ||||| ||||| |||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  4002581 tcggcagttaactactgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 4002502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 24700718 - 24700797
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| ||| ||||||||||| ||| |||||||||||  | |||||| ||||||||||||||||| |||||    
T  24700718 tcggcagttaactgtcgaggaattagaaatccggttgcagttaactcccgaggaaatcctcggtagttaactgccgagga 24700797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 43478906 - 43478827
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| || |  |||||||| |||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  43478906 tcggcagttaactgctgaagttttagaaatccggctgcagttaactgccgaggaaaacttcggtagttaactgccgagga 43478827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 43568925 - 43568991
Alignment:
Q  147 gtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||||| ||||||||| || |||||||||| || ||||||||||||| |||||||||||||    
T  43568925 gtagttaactgctgaggatcttctgttacaaatctgacagaagctctctcatccattattcatctca 43568991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 19440253 - 19440326
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |||||   ||  |||||||||||||||| | ||||||||||||||||||||||||    
T  19440253 tcggcagttaactgccgaagaattcataaaccggctgcagttaactgccgaggaaaacctcggtagttaactgc 19440326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 46344934 - 46345003
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaa 154  Q
    |||||||||||||| ||| |||||  ||| ||||||||||||||||| | ||||||||||||||||||||    
T  46344934 tcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaa 46345003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 46989544 - 46989617
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||| ||||  |||| ||| | |||||||||||||||| | ||||||||||||||||||||||||    
T  46989544 tcggcagttaactaccgagaaatttgaattccggctgcagttaactgccgaggaaaacctcggtagttaactgc 46989617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 48250945 - 48250872
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||| || ||||| ||| | |||||||||||||||| | ||||||||||||| ||||||||||    
T  48250945 tcggcagttaactgctgaggaatttgaattccggctgcagttaactgccgaggaaaacctcgggagttaactgc 48250872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 48888738 - 48888810
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||| | ||||||| ||||||||||||||||    
T  48888738 tcggcagtta-ctgccgaggaattaaaaatccggctgcagttaactgccgaggaaaatctcggtagttaactgc 48888810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 2647749 - 2647693
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatct 167  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  2647749 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatct 2647693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 7247936 - 7247864
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||||| |||||  | |  |||||||||||||||| | |||||||||||||||||||||||    
T  7247936 tcggcagttaactgccgaggaattcaataaccggctgcagttaactgacgaggaaaacctcggtagttaactg 7247864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 30256074 - 30256006
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||| |||||| |||  |||||||||||||||| | |||||||||||| |||||||||||    
T  30256074 agttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgatagttaactgc 30256006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 36817594 - 36817518
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||| |||| ||||| ||| | ||||||||||||||| || |||||| ||||||||||||||||| |||||    
T  36817594 gcagttaactaccgaggaatttgaactccggctgcagttaactatcgaggaaatcctcggtagttaactgccgagga 36817518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 8475823 - 8475902
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||| ||  |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  8475823 tcggcagttaactgccgaagttttagtaaaccggcggcagttaactgccgaggaaaacctcggtagttaactgctgagga 8475902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 46347767 - 46347672
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatc 210  Q
    ||||||||||||||||| | |||||||||||| || |||||||  || |||||| ||||||||||| || | || |||||||||| ||| ||||||    
T  46347767 tcggctgcagttaactgccgaggaaaacctcgataattaactgtcgaagatcttctgctacaaatcagggagaaactctctcatccattgttcatc 46347672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 7245155 - 7245217
Alignment:
Q  151 ttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||| ||| ||||| ||||||||||||| || ||||||||||||| |||||||||||||    
T  7245155 ttaactgccgagtatcttctgctacaaatctgacagaagctctctcatccattattcatctca 7245217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 2062383 - 2062456
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |  |||||||   ||||||||||||||||| |||||||| |||| ||||||||||    
T  2062383 tcggcagttaactgccgaagttttagaaaactggctgcagttaactgtcgaggaaaacttcggcagttaactgc 2062456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 11380438 - 11380511
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |||||| ||||  || |||||||||||| | |||| ||||||||||||| |||||    
T  11380438 tcggcagttaactgccgaggaattaaaaatatggttgcagttaactgccgaggataacctcggtagtttactgc 11380511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 13743290 - 13743347
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||||    
T  13743290 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 13743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 14043974 - 14043901
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| ||| |  ||||||| ||||||||||||||||| | |||||||| |||| ||||||||||    
T  14043974 tcggcagttaactgtcgaagttttagaaaatcggctgcagttaactgccgaggaaaacttcggcagttaactgc 14043901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 29918417 - 29918344
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||| |||||||||||  |||| ||||  |||||||||||||||| | |||||||||||| |||||||||||    
T  29918417 tcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaacctcgttagttaactgc 29918344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 29967570 - 29967497
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||| |||||||||||  |||| ||||  |||||||||||||||| | |||||||||||| |||||||||||    
T  29967570 tcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaacctcgttagttaactgc 29967497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 34049103 - 34049156
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  34049103 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 34049156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 54389818 - 54389871
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  54389818 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 54389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 44227135 - 44227187
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||||| ||||    
T  44227135 aaattcggctggagttaactgccgaggaaaacctcggtagttaactgccgagg 44227187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 16647223 - 16647168
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaa 140  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||| | ||||||    
T  16647223 tcggcagttaactgccgatgttttagaaatccggctgcagttaactgccgaggaaa 16647168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 27739643 - 27739572
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  27739643 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 27739572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 34543212 - 34543141
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  34543212 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 34543141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 20366191 - 20366313
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcat 186  Q
    |||||||||||||||| |||||  |||  | ||||||||||||||   |  ||||||||||||||||| ||  ||||||||| | ||||||||||  ||     
T  20366191 ggcagttaactgccgaggaattcaaaaaccagctgcagttaactgctaaaaaaaacctcggtagttaattgtcgaggatcttctactacaaatctaccag 20366290  T
Q  187 aagctctctcatctattattcat 209  Q
    ||||| ||||||  |||||||||    
T  20366291 aagctttctcattcattattcat 20366313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 41579769 - 41579727
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  41579769 cggctgcagttaactgccgaggaaaacctcggtagttaactgc 41579727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 42756159 - 42756229
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| ||| |||||| |||| ||| |||||||||||| | ||||||||||||  ||||||||||    
T  42756159 gcagttaactgtcgaggaattaaaaatccggttgcagttaactgccgaggaaaacctcgagagttaactgc 42756229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 45507468 - 45507394
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||| |||  | ||| ||||||||||||||||  | ||||||||||||| |||||||| |||||||    
T  45507468 agttaactgccgaggaaaaataaaatcggctgcagttaactaccgaggaaaacctcggcagttaactacggagga 45507394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 49194953 - 49195023
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||| || |||||| |||  |||||||||||||||||  |||||||  |||||||||||||||    
T  49194953 gcagttaactgctgaggaattaaaaagccggctgcagttaactgttaaggaaaatttcggtagttaactgc 49195023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 28611176 - 28611103
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||||  ||||  |||  |||||||||||||||| | ||||||||  ||||||||||||||    
T  28611176 tcggcagttaactgccgagaaattcaaaaaccggctgcagttaactgccgaggaaaacaacggtagttaactgc 28611103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 35743628 - 35743579
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  35743628 tcggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 35743579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 49140897 - 49140844
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||||||||||| | ||||||||||| |||||||||||| |||||    
T  49140897 aaatccggctgcagttaactgccgaggaaaacctcagtagttaactgccgagga 49140844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 2745281 - 2745233
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtc 133  Q
    |||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  2745281 tcggtagttaactgctgaggaatttgaaattcggctgcagttaactgtc 2745233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 6489357 - 6489405
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  6489357 cggctgcagttaactgccgaggaaatcctcggtagttaactgccgagga 6489405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 6745371 - 6745323
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  6745371 cggcggcagttaactgccaaggaaaacctcggtagttaactgccgagga 6745323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 12897824 - 12897892
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  12897824 gcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 12897892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 14398532 - 14398604
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    ||||| |||||||||||| ||||| ||| | |||||||||||||||| | ||| || |||||| |||||||||    
T  14398532 tcggcggttaactgccgaggaatttgaattccggctgcagttaactgccgagggaatcctcggaagttaactg 14398604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 36812833 - 36812913
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattc-ggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||| || |||| ||||| |||| || ||||||||||||||  | ||||||||||||||||| |||||| |||||    
T  36812833 tcggcagttagctaccgaggaatttgaaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 36812913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 41844409 - 41844361
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  41844409 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 41844361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 46697739 - 46697787
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  46697739 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 46697787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 50216928 - 50216884
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||    
T  50216928 ggcagttaactgccgaggaattaaaaatccggctgcagttaactg 50216884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 50477208 - 50477256
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  50477208 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 50477256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 50998756 - 50998684
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||||| |  ||| |||| |||||||||||||||| | | ||||||| |||||| ||||||    
T  50998756 tcggcagttaactgccgaagttttataaatccggctgcagttaactgccgaagaaaaccgcggtagctaactg 50998684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 4015205 - 4015126
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||| ||  |||| | ||||||||| | ||||||||||||| |||||||||| |||||    
T  4015205 tcggcagttaactgccgaagttttagtaaaccggcgggagttaactgccgaggaaaacctcggaagttaactgccgagga 4015126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 28817077 - 28817006
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||| | |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  28817077 tcggcagttaactgccaaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 28817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 30943222 - 30943265
Alignment:
Q  121 gcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| | |||||||||||||||||||||||| |||||    
T  30943222 gcagttaactgccgaggaaaacctcggtagttaactgccgagga 30943265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 42166486 - 42166407
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||| ||  |||| ||||| ||||| | |||||||| ||||||||||||||| |||||    
T  42166486 tcggcagttaactgccgaagttttagtaaaccggcggcagtaaactgccgaggaaaacttcggtagttaactgccgagga 42166407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 49268915 - 49268848
Alignment:
Q  91 gttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||  || |||||| |||| ||| |||||||||||| | |||||||| |||||||||||||||    
T  49268915 gttaactgtggaggaattaaaaatccggttgcagttaactgccgaggaaaacatcggtagttaactgc 49268848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 3501940 - 3501898
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  3501940 cggcggcagttaactgccgaggaaaacctcggtagttaactgc 3501898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 23443182 - 23443136
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||||| ||||| ||| | ||||||||||||||||    
T  23443182 tcggcagttaactgccgaggaatttgaattccggctgcagttaactg 23443136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 42760254 - 42760212
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||| ||||||||| | ||||||||||||||||||||||||    
T  42760254 cggctgtagttaactgccgaggaaaacctcggtagttaactgc 42760212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 50957739 - 50957685
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    ||||||| ||||||| ||||| ||||| |||||||||||||||| | ||||||||    
T  50957739 gcagttagctgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 50957685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 2433019 - 2432946
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| ||| |||||  | |  ||| | |||||||||||| |||||||||| |||||||||||||    
T  2433019 tcggcagttaactgtcgaggaattcaataaccggatacagttaactgtcgaggaaaaccttggtagttaactgc 2432946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 4004885 - 4004922
Alignment:
Q  127 aactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  4004885 aactgtcgaggaaaacctcggtagttaactgccgagga 4004922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 14403046 - 14402989
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| ||||| ||||| |||| | ||||||||| | ||||||||    
T  14403046 tcggcagttaactgccgaggaatttgaaatccggcggtagttaactgccgaggaaaac 14402989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 16484510 - 16484453
Alignment:
Q  107 ttagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||| |||||||||||||||| | |||||||| |||| |||||||||| |||||    
T  16484510 ttagtaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgagga 16484453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 52567760 - 52567833
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||||  ||||  ||| ||||||||| ||||||| | || ||||| | |||||||||||||    
T  52567760 tcggcagttaactgccgaataattcaaaaatcggctgcacttaactgccgagaaaaacttaggtagttaactgc 52567833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 2950394 - 2950442
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  2950394 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 2950442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 3953260 - 3953212
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  3953260 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 3953212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 4008368 - 4008320
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||||| || |||||||||| |||||||||| |||||    
T  4008368 cggcggcagttaactgtcgagaaaaacctcgggagttaactgccgagga 4008320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 6143699 - 6143747
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| | |||||||| |||| |||||||||| |||||    
T  6143699 cggctgcagttaactgccgaggaaaacttcggcagttaactgccgagga 6143747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 8156536 - 8156584
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  8156536 cggcggcagttaactgccgaggaaaacctcggcagttaactgccgagga 8156584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 42165191 - 42165239
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  42165191 cggcggcagttaattgccgaggaaaacctcggtagttaactgccgagga 42165239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 49138642 - 49138690
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  49138642 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 49138690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 49144501 - 49144453
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | | |||||||||||||||||||||| |||||    
T  49144501 cggcggcagttaactgccgaagaaaacctcggtagttaactgccgagga 49144453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 50998689 - 50998657
Alignment:
Q  126 taactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||| ||||||||||||||||||||||||    
T  50998689 taactgtcgaggaaaacctcggtagttaactgc 50998657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 54392073 - 54392025
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  54392073 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 54392025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 18307251 - 18307379
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||| ||| |||||| ||| ||||||| ||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  18307251 tcggcagttaactgtcgaggaattaaaaaatcggctgtagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggc 18307350  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | |||| |||||||| |||||||||||||    
T  18307351 agaagccctctcatccattattcatctca 18307379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 542866 - 542738
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||||| | ||||||  |||||||||||||||| ||||||||| |||||||||||||||    
T  542866 tcggcagttaactgtcgaggaattagaaatccggctgcagctaactgccgaggaaactctcggtagttaactgccgaggatcttctgctacaaatctggc 542767  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | ||| ||||||||| |||||||||||||    
T  542766 agaagttctctcatccattattcatctca 542738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 11346008 - 11346133
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataa 188  Q
    |||||||||||||| |  |||||||| | |||||||||||||| | |||||||||||||||||||||||  ||||||||| |||||||||||||||| ||    
T  11346008 cagttaactgccgaagttttagaaatccagctgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgctacaaatctggcagaa 11346107  T
Q  189 gct-ctctcatctattattcatctca 213  Q
     || |||||||| |||||||||||||    
T  11346108 tctcctctcatccattattcatctca 11346133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 25497540 - 25497636
Alignment:
Q  117 ggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||| | ||||||| |||||||||||||||| ||| ||||| ||||||||||| |||| ||||||||||||| |||||||||||||    
T  25497540 ggctgcagttaactgccgaggaaaatctcggtagttaactgccgagaatcttctgctacaaatcaggcagaagctctctcatccattattcatctca 25497636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 20192354 - 20192465
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataa 188  Q
    ||||||||||| || |||||  | | ||||||||||||||||| | |||||||| ||| ||||||| ||| ||||||||| |||||||||||||||| ||    
T  20192354 cagttaactgctgaagaattcaataatcggctgcagttaactgccgaggaaaacttcgatagttaaatgccgaggatcttctgctacaaatctggcagaa 20192453  T
Q  189 gctctctcatct 200  Q
    ||||||||||||    
T  20192454 gctctctcatct 20192465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 35564315 - 35564386
Alignment:
Q  142 cctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  35564315 cctcggtagttaactgctgaggatcttctgctacaaatctggcataagctctctcatccattattcacctca 35564386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 34122521 - 34122600
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||| |||||||||||||||| |||||    
T  34122521 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaagctcggtagttaactgccgagga 34122600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 3600333 - 3600462
Alignment:
Q  85 tcggcagttaactgccgatgaattagaa-attcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctgg 183  Q
    ||||||||||||||||||  ||||| || |  | |||||||||||||| | |||||||||||| |||||||| || ||||||||| |||||||||||||     
T  3600333 tcggcagttaactgccgaataattataataaccagctgcagttaactgccaaggaaaacctcgatagttaacagccgaggatcttctgctacaaatctga 3600432  T
Q  184 cataagctctctcatctattattcatctca 213  Q
    || ||| ||| ||||  |||||||||||||    
T  3600433 cagaagttctttcatgcattattcatctca 3600462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 7762320 - 7762241
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||||||| |||||||||||||| ||||||||||| | |||||||||| |||||    
T  7762320 tcggcagttaactgccgaagttttagaaattcggttgcagttaactgtcgaggaaaacctcaggagttaactgccgagga 7762241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 7017514 - 7017588
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||| || ||||| ||||| ||||||||||||||| || |||||||||||||||||||||||| |||||    
T  7017514 agttaactgctgaggaatttgaaatccggctgcagttaactctcaaggaaaacctcggtagttaactgccgagga 7017588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 34124011 - 34123933
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||||||||||||| |||  |||| ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||    
T  34124011 tcggcagttaactgtcgagaaatttgaaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgagg 34123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 28388595 - 28388522
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||| ||||||| ||||| ||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  28388595 tcggcagttagctgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaactgc 28388522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 7757326 - 7757401
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| |  |||||||| |||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  7757326 cagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgctagttaactgccgagga 7757401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 25897155 - 25897076
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||| |||| ||||| ||| | |||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  25897155 tcggcagttaactaccgaggaatttgaactccggctgcagttaactgcccaggaaatcctcggtagttaactgccgagga 25897076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 41798815 - 41798894
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||||| | | ||||||||||||||||| |||| |||||    
T  41798815 tcggcagttaactgctgaagaatttgaaatccggctgcagttaactgccgaagaaaacctcggtagttatctgccgagga 41798894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 39743220 - 39743154
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaac 155  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| | ||||||||||||| |||||||    
T  39743220 cagttaactgccgaggaatttgaaattcgactgcagttaactgccgaggaaaacctcggcagttaac 39743154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 42865816 - 42865754
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatct 211  Q
    |||||| ||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  42865816 agttaattgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 42865754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 5773 - 5846
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |  |||||||| || |||||||||| || | ||||||||||||||||||||||||    
T  5773 tcggcagttaactgccgaagttttagaaatacgactgcagttaattgccgaggaaaacctcggtagttaactgc 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 19037520 - 19037463
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  19037520 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 19037463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 1035181 - 1035260
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||| |  | |||||| ||||| ||||||||||| |||||    
T  1035181 tcggcagttaactgccgaggaatttgaatttcggctgcagttaattaccgaggaaatcctcgatagttaactgccgagga 1035260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 17965846 - 17965925
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| || ||| |||||| ||||||| ||||||||||||| | |||||||| ||||||||||| ||| |||||    
T  17965846 tcggcagttaattgtcgaggaattaaaaattcgactgcagttaactgccgaggaaaacatcggtagttaattgccgagga 17965925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 17966962 - 17966883
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||||||  ||||| |||| || ||||||||||||  | ||||||| |||||||||||||||| |||||    
T  17966962 tcggcagttaactgccgagaaattaaaaatccgactgcagttaactaccgaggaaaatctcggtagttaactgctgagga 17966883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 38968092 - 38968170
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||| |||||||| |||| |||| | |||| |||||||||||||||| | |||||||||||| ||||||||||| ||||    
T  38968092 tcggtagttaactaccgaggaataaaaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgccgagg 38968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 28387270 - 28387339
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| ||||| ||| | ||||||||||||| || | |||||| |||||||||||||||||    
T  28387270 cagttaactgccgaggaatttgaattccggctgcagttaattgccgaggaaatcctcggtagttaactgc 28387339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 8101 - 7994
Alignment:
Q  107 ttagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatct--tttgctacaaatctggcataagct-ctctcatctatt 203  Q
    |||||||| ||| |||||||||||| | ||||||| |||||||||||||| | ||||||||  |  ||||||||||||||| || || ||| |||| |||    
T  8101 ttagaaatacggttgcagttaactgccgaggaaaatctcggtagttaactaccgaggatctcctgcgctacaaatctggcagaatctcctcacatccatt 8002  T
Q  204 attcatct 211  Q
    ||||||||    
T  8001 attcatct 7994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 4204254 - 4204214
Alignment:
Q  118 gctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4204254 gctgcagttaactgtcgaggaaaacctcggtagttaactgc 4204214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 8537215 - 8537291
Alignment:
Q  138 aaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagct-ctctcatctattattcatctca 213  Q
    |||| |||||||||||||||| |||||| || ||||||||||||| || || || |||||||| |||||||||||||    
T  8537215 aaaatctcggtagttaactgccgaggatgttctgctacaaatctgccagaatctcctctcatccattattcatctca 8537291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 8702270 - 8702202
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||| |||||| ||||  | |||||||||||||   |||||||||||||||||||||||    
T  8702270 cagttaactgccgaggaattaaaaatctgactgcagttaactgctgaggaaaacctcggtagttaactg 8702202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 25889994 - 25890070
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||| ||||||||| ||||| ||||| || ||||||||||||  | ||||||||||||||||| |||||| |||||    
T  25889994 gcagtaaactgccgaggaatttgaaatccgactgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 25890070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 1397426 - 1397380
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||    
T  1397426 tcggcagttaactgctgaggaattagaaatccggctgcagttaactg 1397380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 3891480 - 3891537
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | ||||||||    
T  3891480 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 3891537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 18538411 - 18538338
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| || ||| |||||  |||  |||||||||||||||| | |||||||| |||||||||||||||    
T  18538411 tcggcagttaattgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacttcggtagttaactgc 18538338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 30354437 - 30354400
Alignment:
Q  120 tgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||| |||||||||||||||||||||||    
T  30354437 tgcagttaactgtcgaggaaaacctcggtagttaactg 30354400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 30708926 - 30708983
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | ||| ||||||||| |||||||||| |||||||||    
T  30708926 aaatccggctgcagttaactgccgagggaaacctcgggagttaactgccgaggatctt 30708983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 41201756 - 41201797
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  41201756 cggctgcagttaactgccgaggaaaacctcggtagttaactg 41201797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 42539429 - 42539376
Alignment:
Q  105 aattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||| ||||||||||||||||||||| | |||||||| | |||||||||||||    
T  42539429 aattaaaaattcggctgcagttaactgccgaggaaaactttggtagttaactgc 42539376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 8539592 - 8539536
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||    
T  8539592 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaa 8539536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 13568151 - 13568095
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||| | |||||||    
T  13568151 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 13568095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 13837752 - 13837800
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  13837752 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 13837800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 28238167 - 28238215
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  28238167 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 28238215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 30192520 - 30192568
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |||||||| |||| |||||||||| |||||    
T  30192520 cggctgcagttaactgtcgaggaaaacttcggcagttaactgccgagga 30192568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 25877619 - 25877697
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||| |||| |||||| ||||| ||||  |||||||| ||||||| | |||||||| ||||||||||||||| |||||    
T  25877619 tcggcaattaaatgccgaggaattcgaaac-cggctgcaattaactgccgaggaaaacttcggtagttaactgccgagga 25877697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 33995220 - 33995145
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||  ||||  ||| |||| |||| ||||||| | ||||||||||||| |||||||||| |||||    
T  33995220 cagttaactgccgagaaattcaaaaatcggatgcaattaactgccgaggaaaacctcgggagttaactgccgagga 33995145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 34682258 - 34682325
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||| ||| |||||  |||  |||||||||||||||| | ||||||||||||| ||||||||    
T  34682258 cagttaactgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaact 34682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 41799839 - 41799764
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| || |||||||||||   |||||||||||||| | | |||||| |||| |||||||||| |||||    
T  41799839 cagttaactgctgaggaattagaaatctagctgcagttaactgccgatgaaaacttcggaagttaactgctgagga 41799764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 19228722 - 19228676
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||||||||||||||||| |||  ||| ||||||||||||    
T  19228722 tcggcagttaactgccgatgaattaaaaaaccggatgcagttaactg 19228676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 38855756 - 38855714
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  38855756 cggcggcagttaactgccgaggaaaacctcggtagttaactgc 38855714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 3603192 - 3603151
Alignment:
Q  117 ggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||  | ||||||||||||||||||||||||    
T  3603192 ggctgcagttaacttccgaggaaaacctcggtagttaactgc 3603151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 27532659 - 27532614
Alignment:
Q  119 ctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||| || ||||||||||||| |||||||||| |||||    
T  27532659 ctgcagttaactatcgaggaaaacctcggcagttaactgccgagga 27532614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 28880345 - 28880402
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||  ||||| | ||||||||||||||| |||||||| |||||||||    
T  28880345 aaatccggctgcagcaaactgccgaggaaaacctcggtaattaactgccgaggatctt 28880402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 1398605 - 1398673
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||| |||||  | |  ||| |||||||||| | | |||||||||||||||||||||||    
T  1398605 cagttaactgccgaggaattcaataaccggttgcagttaacagccaaggaaaacctcggtagttaactg 1398673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 1401428 - 1401388
Alignment:
Q  173 tacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||| ||| ||||||||||||| |||||||||||||    
T  1401428 tacaaatctagcagaagctctctcatccattattcatctca 1401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 11348551 - 11348495
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| |  |||||||| ||| |||||||||||| | |||||||    
T  11348551 tcggcagttaactgccgaagttttagaaatccggatgcagttaactgccgaggaaaa 11348495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 14280945 - 14280897
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||||||||||| || |||||    
T  14280945 cggcggcagttaactgccgaggaaaacctcggtagttaacggccgagga 14280897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 19035266 - 19035314
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  19035266 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 19035314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 27659976 - 27660016
Alignment:
Q  124 gttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||| | |||||||||||||||||||||||| |||||    
T  27659976 gttaactgccgaggaaaacctcggtagttaactgccgagga 27660016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 27867896 - 27867840
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| ||||| ||| | ||||||||||| |||| | |||||||    
T  27867896 tcggcagttaactgccgaggaatttgaattccggctgcagtttactgccgaggaaaa 27867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 29430022 - 29430090
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||||| |||  | |||  ||||||||||||| || | ||||||||||||| ||||||||    
T  29430022 gcagttaactgccgaggaaaaataaaaccggctgcagttaagtgccgaggaaaacctcggcagttaact 29430090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 29430651 - 29430583
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||||| |||  | |||  ||||||||||||||||   ||||||||||||| ||||||||    
T  29430651 gcagttaactgccgaggaaaaataaaaccggctgcagttaactgctgaggaaaacctcggcagttaact 29430583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 30887434 - 30887390
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||  | ||||||||||| ||||||||||||||||    
T  30887434 ggcagttaactgctaaggaattagaaatccggctgcagttaactg 30887390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 43094648 - 43094596
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||| |  |||||||| |||||||||||||||| | |||||||    
T  43094648 cagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaa 43094596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 4e-37; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 30355315 - 30355189
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    ||||||||||| ||| || |||||  ||| ||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  30355315 tcggcagttaattgctgaagaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggc 30355216  T
Q  185 ataagctctctcatctattattcatct 211  Q
    | ||||||||||||| |||||||||||    
T  30355215 agaagctctctcatccattattcatct 30355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 40587677 - 40587786
Alignment:
Q  104 gaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctatt 203  Q
    ||||||||||| || ||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||| |||||||  | ||||||||||||| |||    
T  40587677 gaattagaaatccgactgcagttaactgtcgaggaaaacctcagtagttaactgccgaggatcttatgctataaatctgaaagaagctctctcatccatt 40587776  T
Q  204 attcatctca 213  Q
    ||||||||||    
T  40587777 attcatctca 40587786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 42682024 - 42682119
Alignment:
Q  118 gctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||||||| | ||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||    
T  42682024 gctgcagttaactgccgaggaaaacctcggtaattaactgccgaggatcttctgctacaaatctagcataagttctctcatccattattcatctca 42682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 17838647 - 17838776
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |  |||||||| |||||||||| ||||  | |||||||||||| ||||||||||| || |||||| |||||||||||||||    
T  17838647 tcggcagttaactgccgaagttttagaaatccggctgcagtaaactaccgaggaaaacctcgatagttaactgccgacgatcttctgctacaaatctggc 17838746  T
Q  185 ataagct-ctctcatctattattcatctca 213  Q
    | || || |||||||| |||||||||||||    
T  17838747 agaatctcctctcatccattattcatctca 17838776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 41047774 - 41047902
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||| |||||||||| || |||||  | | |||| || ||||||||| | |||||||| ||||||||||||||| ||||||||| ||||||||||||||     
T  41047774 tcggtagttaactgcagaagaatttaataatcgggtgtagttaactgccgaggaaaacttcggtagttaactgccgaggatcttctgctacaaatctgga 41047873  T
Q  185 ataagctctctcatctattattcatctca 213  Q
      ||||||||||||| |||||||||||||    
T  41047874 ggaagctctctcatccattattcatctca 41047902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 46863420 - 46863292
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    ||||||||||||||||||  ||||  |||  ||||||||||||||||   | ||||| ||| |||||||||||| || |||||| |||||||||||||||    
T  46863420 tcggcagttaactgccgagaaattgaaaaaccggctgcagttaactgcgaacgaaaatctctgtagttaactgccgaagatcttctgctacaaatctggc 46863321  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | ||||||| ||||| |||||||||||||    
T  46863320 agaagctctttcatccattattcatctca 46863292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 210
Target Start/End: Complemental strand, 28980246 - 28980123
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtcta-ggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcat 186  Q
    ||||||| ||||||| |||||  | || ||| |||||||||||| | | ||||||||||||||||||||||| |||||| || ||||||||||||| ||     
T  28980246 gcagttagctgccgaagaattcaatatccggatgcagttaactgccgaaggaaaacctcggtagttaactgccgaggattttctgctacaaatctgacag 28980147  T
Q  187 aagctctctcatctattattcatc 210  Q
    ||||||||||||| ||||||||||    
T  28980146 aagctctctcatccattattcatc 28980123  T

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Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 36394964 - 36394886
Alignment:
Q  135 aggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||| |||||||||||||  ||||| ||||||    
T  36394964 aggaaaacctcggtagttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccgttattaatctca 36394886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 21188438 - 21188374
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  21188438 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 21188374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 17840966 - 17840887
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| || ||||||||||||| | |||||||||||||||||||||||| |||||    
T  17840966 tcggcagttaactgccgaagttttagaaatccgactgcagttaactgccgaggaaaacctcggtagttaactgccgagga 17840887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 28115549 - 28115480
Alignment:
Q  144 tcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||  |||| |||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  28115549 tcggtagttaactgttgagggtcttctgctacaaatctagcataagctctctcatccattattcatctca 28115480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 9494882 - 9494810
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||||| |||||| |||  |||||||||||||||| | ||||||||||||| |||||||||    
T  9494882 tcggcagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaactg 9494810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 42499410 - 42499486
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggat 165  Q
    ||||||| |||||| ||||| ||||| || ||||||||||||| | |||||||||||||||||||||||| ||||||    
T  42499410 cagttaattgccgaggaatttgaaatccgactgcagttaactgccgaggaaaacctcggtagttaactgccgaggat 42499486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 5537869 - 5537926
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  5537869 tcggcagttagctgccgaggaattagaaattcggctgcagttaactgccgaggaaaac 5537926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 47776333 - 47776408
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||  ||||| ||||  ||||||||||||||| | ||||||||||||||| |||||||| |||||    
T  47776333 cagttaactgccgagaaattaaaaatctggctgcagttaactgccgaggaaaacctcggtaattaactgccgagga 47776408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 34623456 - 34623386
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaac 155  Q
    |||||||||||||||||| ||||||  |  ||||||||||||||||| | |||||| ||||||||||||||    
T  34623456 tcggcagttaactgccgaggaattaagagatcggctgcagttaactgccgaggaaatcctcggtagttaac 34623386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 43686921 - 43686859
Alignment:
Q  147 gtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcat 209  Q
    |||||||||||| ||| || || ||||||||||||| |||||||||||||||| |||||||||    
T  43686921 gtagttaactgccgagaattttctgctacaaatctgacataagctctctcatccattattcat 43686859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 9367774 - 9367721
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  9367774 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 9367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 47060924 - 47060996
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| ||| |||||  |||| |||||| ||||||||| | ||||||||||||||||||||||||    
T  47060924 tcggcagttaactgtcgaggaattcaaaat-cggctgtagttaactgccgaggaaaacctcggtagttaactgc 47060996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 618801 - 618745
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | |||||||    
T  618801 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 34139932 - 34139996
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| |||||||||   |||||||||||||| ||||||||| ||| |||||||||||||    
T  34139932 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 34139996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 34738380 - 34738440
Alignment:
Q  104 gaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||  |||||||||||| || | |||||||||||||||||||||||| |||||    
T  34738380 gaattagaaatctggctgcagttaaatgccgaggaaaacctcggtagttaactgccgagga 34738440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 34742471 - 34742399
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    ||||||||||| || ||| |||||||||||  | ||||||||||||| | ||||||||||||| |||||||||    
T  34742471 tcggcagttaattgtcgaggaattagaaatctgactgcagttaactgccgaggaaaacctcggaagttaactg 34742399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 10705247 - 10705318
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||| | || ||||||| || ||||||||||    
T  10705247 ggcagttaactgccgagaaattaaaaaatcggctgcagttaactgccgagaaaaaccttgggagttaactgc 10705318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 17834484 - 17834563
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||| ||  |||| ||||||||||| | |||||||| ||||||||||||||| |||||    
T  17834484 tcggcagttaactgccgaagttttagtaaaccggcggcagttaactgccgaggaaaacttcggtagttaactgccgagga 17834563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 27453670 - 27453615
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaa 140  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||| | ||||||    
T  27453670 tcggcagttaactgccgaggaattaaaaatccggctgcagttaactgccgaggaaa 27453615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 45364227 - 45364168
Alignment:
Q  154 actgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||| |||||||||  ||||||||||||| | ||||||||| |||||||||||||||||    
T  45364227 actgccgaggatcttcggctacaaatctggtagaagctctcttatctattattcatctca 45364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 15070382 - 15070431
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  15070382 tcggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 15070431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 41049265 - 41049196
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaa 154  Q
    |||| ||||||||| ||| |||||  | | ||||||||||||||||| | ||||||||||||||||||||    
T  41049265 tcggtagttaactgtcgaagaattcaataatcggctgcagttaactgccgaggaaaacctcggtagttaa 41049196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 48269713 - 48269766
Alignment:
Q  160 gaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||| ||||||||||||| || ||| ||||||||| |||||||||||||    
T  48269713 gaggatcttctgctacaaatctgacaaaagttctctcatccattattcatctca 48269766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 18105401 - 18105449
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  18105401 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 18105449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 45767906 - 45767858
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  45767906 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 45767858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 7066 - 7137
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||| |||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  7066 tcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 12210666 - 12210595
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| |||| ||||||||||| | |||||||| |||| ||| ||||    
T  12210666 tcggcagttaactgccgaagttttagaaatacggccgcagttaactgccgaggaaaacttcggcagtaaact 12210595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 19044291 - 19044369
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |||||| ||||| ||||  || |||||||||| || | |||||||| ||||||||||||||| |||||    
T  19044291 tcggcagttaattgccgaggaatttgaaac-cgactgcagttaattgccgaggaaaacttcggtagttaactgccgagga 19044369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 20710345 - 20710267
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |||||| ||||| ||||  || |||||||||| || | |||||||| ||||||||||||||| |||||    
T  20710345 tcggcagttaattgccgaggaatttgaaac-cgactgcagttaattgccgaggaaaacttcggtagttaactgccgagga 20710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 34139901 - 34139940
Alignment:
Q  92 ttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  34139901 ttaactgccgaagaattagaaatccggctgcagttaactg 34139940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 35606822 - 35606865
Alignment:
Q  121 gcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| | |||||||||||||||||||||||| |||||    
T  35606822 gcagttaactgccgaggaaaacctcggtagttaactgccgagga 35606865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 46738799 - 46738858
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacct 144  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | || |||||||    
T  46738799 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgagaaaaacct 46738858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 11629806 - 11629764
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||    
T  11629806 cggcggcagttaactgtcgaggaaaacctcggcagttaactgc 11629764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 29592542 - 29592612
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||| ||| ||||| ||||| || ||||| ||||||| | | |||||| ||||||||||||||    
T  29592542 ggcagttaactgtcgaggaatttgaaatccgactgcaattaactgccgatgaaaacttcggtagttaactg 29592612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 34622500 - 34622566
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaac 155  Q
    ||||||||||| || ||||||  ||  || ||||||||||||||| |||||| ||||||||||||||    
T  34622500 cagttaactgcagaggaattaagaaaccgactgcagttaactgtcgaggaaatcctcggtagttaac 34622566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 37340303 - 37340377
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||||||||| ||| |||||  |||  ||| |||||||||||| | || ||||||||||||||||||||| ||||    
T  37340303 cagttaactgtcgaggaattcaaaaaccggttgcagttaactgccgagaaaaacctcggtagttaactgccgagg 37340377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 40140739 - 40140801
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtag 150  Q
    ||||||||||||||| |||  | ||| |||||| |||||||||| | ||||||||||||||||    
T  40140739 gcagttaactgccgaggaaaaataaaatcggctccagttaactgccgaggaaaacctcggtag 40140801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 45361646 - 45361692
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||| ||| |||||| |||| ||||||||||||||||    
T  45361646 tcggcagttaactgacgaggaattaaaaatccggctgcagttaactg 45361692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 47743036 - 47742982
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||| || ||| ||||| || ||||||||||||||||||||| ||||||||    
T  47743036 gcagttaattgtcgaggaatttgagattcggctgcagttaactgtcgaggaaaac 47742982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 10098162 - 10098121
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||| | ||||||||||||| |||||||||    
T  10098162 cggctgcagttaactgccgaggaaaacctcgggagttaactg 10098121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 15074273 - 15074232
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  15074273 cggcggcagttaactgccgaggaaaacctcggtagttaactg 15074232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 20353972 - 20353927
Alignment:
Q  119 ctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||| || ||||||||||| |||||||||||| |||||    
T  20353972 ctgcagttaactatcgaggaaaacctcagtagttaactgccgagga 20353927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 46908549 - 46908492
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||| ||| |  |||||||| |||||||||||||||| | ||||||||    
T  46908549 tcggcagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaac 46908492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 48314670 - 48314743
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |||||  | |  |||||||||||||||  | | ||||||||||||| ||||||||    
T  48314670 tcggcagttaactgccgaggaattcaataaccggctgcagttaactaccgacgaaaacctcggtacttaactgc 48314743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 9365707 - 9365755
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  9365707 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 9365755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 10098394 - 10098442
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  10098394 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 10098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 29112401 - 29112449
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| | |||||||| |||| |||||||||| |||||    
T  29112401 cggctgcagttaactgccgaggaaaacttcggcagttaactgctgagga 29112449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 30791053 - 30791005
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||  | |||||||||||||||||||||||| |||||    
T  30791053 cggcggcagttaactaccgaggaaaacctcggtagttaactgccgagga 30791005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 41884171 - 41884123
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  41884171 cggcggcagttaactgccgaggaaaacctcggaagttaactgccgagga 41884123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 12784033 - 12783905
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    ||||||||||||||||||||||||  | |  |||||||||||| ||||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||     
T  12784033 tcggcagttaactgccgatgaattcaataaccggctgcagttagctgtcgaggaaaacctcagtagttaactgccgaggatcttctgctacaaatctgga 12783934  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | ||||||||||||| |||||||||||||    
T  12783933 aaaagctctctcatccattattcatctca 12783905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 13401483 - 13401611
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||   |||||||  | ||||||||||| | ||||||||| |||||||||| || |    
T  13401483 tcggcagttaactgccgaggaattaaaaaatcggctgcagttaactgctaaggaaaatattggtagttaactaccgaggatcttctgctacaaatatgac 13401582  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | ||||||||||||| |||||||||||||    
T  13401583 agaagctctctcatccattattcatctca 13401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 11840321 - 11840247
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||| |  ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  11840321 agttaactgccgaagttttagaaattcggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 11840247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 32643597 - 32643524
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| | |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  32643597 tcggcagttaactgccaaggaattaaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgc 32643524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 31146373 - 31146449
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  31146373 gcagttaactgccgaggaatttgaaatccggctgcagttaactgtcgaggaaaacatcggtagttaactgccgagga 31146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 13388784 - 13388705
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||||||||  ||||  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  13388784 tcggtagttaactgccgagaaatttcaaattcggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 13388705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 31768750 - 31768829
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |||||| |||| ||||||||||||| || | |||||||||||||||||||||||| |||||    
T  31768750 tcggcagttaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgagga 31768829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 28362804 - 28362728
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  28362804 gcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgcagagga 28362728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 2051026 - 2051104
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||||||||| ||||  ||| |||||||||||| | ||||||||||||||||||| |||| |||||    
T  2051026 tcggcagttaactgccgatgaatttgaaac-cggttgcagttaactgccgaggaaaacctcggtagttatctgcagagga 2051104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 29076399 - 29076320
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| ||| |  |||||||| ||||||||||||||||   |||||||||||||||||||||||| |||||    
T  29076399 tcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29076320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 29109932 - 29109853
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| ||| |  |||||||| ||||||||||||||||   |||||||||||||||||||||||| |||||    
T  29109932 tcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29109853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 29111372 - 29111293
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| ||| |  |||||||| ||||||||||||||||   |||||||||||||||||||||||| |||||    
T  29111372 tcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29111293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 6204850 - 6204907
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  6204850 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 6204907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 11691817 - 11691874
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  11691817 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 11691874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 29061293 - 29061338
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  29061293 tcggcagttaactgccgaggaattagaaattcggctgcagttaact 29061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 22305131 - 22305187
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatct 167  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  22305131 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatct 22305187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 29061331 - 29061395
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||| | ||||||||| |||||||||||||| | ||||||||||||| |||||||||||||    
T  29061331 agttaacttccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 29061395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 25554702 - 25554764
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcgg 147  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| |||||||||| ||||    
T  25554702 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgcctaggaaaacttcgg 25554764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 29065791 - 29065853
Alignment:
Q  151 ttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||  ||||||||| |||||||||||||||  ||||||||||||| |||||||||||||    
T  29065791 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29065853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 29074804 - 29074866
Alignment:
Q  151 ttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||  ||||||||| |||||||||||||||  ||||||||||||| |||||||||||||    
T  29074804 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 29079568 - 29079630
Alignment:
Q  151 ttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||  ||||||||| |||||||||||||||  ||||||||||||| |||||||||||||    
T  29079568 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29079630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 29107377 - 29107439
Alignment:
Q  151 ttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||  ||||||||| |||||||||||||||  ||||||||||||| |||||||||||||    
T  29107377 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29107439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 23958887 - 23958960
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||||  ||||  |||  ||||||||||||| || | ||||||||||||||||||||||||    
T  23958887 tcggcagttaactgccgagaaattccaaaaccggctgcagttaaatgccgaggaaaacctcggtagttaactgc 23958960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 29065737 - 29065782
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  29065737 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29065782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 29074750 - 29074795
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  29074750 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 29079514 - 29079559
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  29079514 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 29107323 - 29107368
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  29107323 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 8193282 - 8193206
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| |||||| |||  |||||||||||||||| | |||||||| |||  |||||||||| |||||    
T  8193282 gcagttaactgccgaggaattaaaaacacggctgcagttaactgccgaggaaaacttcgacagttaactgccgagga 8193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 30258358 - 30258263
Alignment:
Q  118 gctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctac--aaatctggcataagctctctcatctattattcatct 211  Q
    |||||||||||||||| ||||||| ||||| |||||||||| ||  |||||  |||||  |||||||  | ||||||||||||| |||||||||||    
T  30258358 gctgcagttaactgtcgaggaaaatctcggcagttaactgccgataatcttcagctacgaaaatctgagagaagctctctcatccattattcatct 30258263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 31771797 - 31771738
Alignment:
Q  105 aattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||| |||||||||||||||| | ||||||| |||||||||||| ||| |||||    
T  31771797 aattagaaatccggctgcagttaactgccgaggaaaatctcggtagttaattgccgagga 31771738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 2109514 - 2109571
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | ||||||||    
T  2109514 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 2109571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 16192766 - 16192839
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| |||  ||||  ||| |||||||||||||| |||| |||||| |||||| ||||||||||    
T  16192766 tcggcagttaactgtcgagtaatttaaaaatcggctgcagttaagtgtcgaggaaagcctcggcagttaactgc 16192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 26712075 - 26712124
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  26712075 tcggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 26712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 13382657 - 13382705
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  13382657 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 13382705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 14012448 - 14012380
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||||| |  |||||||| ||||| |||||||||| | |||||||| |||| ||||||||    
T  14012448 gcagttaactgccgaagttttagaaatccggcttcagttaactgccgaggaaaacatcggcagttaact 14012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 18347038 - 18347094
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||| | |||||||    
T  18347038 tcggcagttaactgccgaggaatctgaaatccggctgcagttaactgccgaggaaaa 18347094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 28249913 - 28249961
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  28249913 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 28249961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 32034404 - 32034340
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| || |||||| |||||||||||||||| ||| ||||| ||| ||||||| |||||    
T  32034404 agttaactgccgatgatcttctgctacaaatctggcagaagatctcttatccattattcgtctca 32034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 9048072 - 9048151
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  | | |||  |||||||||||||||  | |||||||| ||||||||||||||| |||||    
T  9048072 tcggcagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 9048151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 32223589 - 32223510
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  | | ||| |||||||||||||||   | |||||||| ||||||||||||||| |||||    
T  32223589 tcggcagttaactgccgaagtttgaaaaaatcggctgcagttaaccaccgaggaaaacttcggtagttaactgccgagga 32223510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 18606072 - 18606114
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| | ||||||||||||||| ||||||||    
T  18606072 cggctgcagttaactgccgaggaaaacctcggtacttaactgc 18606114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 11694073 - 11694024
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||| |||||||| || | |||||||||||||||||||||||| |||||    
T  11694073 tcggcggcagttaattgccgaggaaaacctcggtagttaactgccgagga 11694024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 15888876 - 15888803
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||| |||| |  |||||||  |||||||||||||||| | ||||||||  |||||||| |||||    
T  15888876 tcggcagttaactaccgaagttttagaaaaccggctgcagttaactgccgaggaaaactgcggtagtttactgc 15888803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 18351683 - 18351646
Alignment:
Q  121 gcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  18351683 gcagttaactgccgaggaaaacctcggtagttaactgc 18351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 24088831 - 24088790
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    ||||| |||||||||||| ||||||| |||||||||||||||    
T  24088831 cggctacagttaactgtcgaggaaaatctcggtagttaactg 24088790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 6207105 - 6207057
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  6207105 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 6207057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 9049129 - 9049081
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||  | |||||||| ||||||||||||||| |||||    
T  9049129 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 9049081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 24721998 - 24721962
Alignment:
Q  121 gcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    ||||||||||| | |||||||||||||||||||||||    
T  24721998 gcagttaactgccgaggaaaacctcggtagttaactg 24721962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 26351141 - 26351093
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  26351141 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 26351093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 26712268 - 26712228
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  26712268 cggcggcagttaactgccgaggaaaacctcggtagttaact 26712228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 26855977 - 26856013
Alignment:
Q  170 tgctacaaatctggcataagctctctcatctattatt 206  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  26855977 tgctacaaatctggcagaagctctctcatccattatt 26856013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 27616743 - 27616791
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | | |||||||||||||||||||||| |||||    
T  27616743 cggcggcagttaactgccgaagaaaacctcggtagttaactgccgagga 27616791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 27641763 - 27641715
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||| | |||| |||||||||||||||||||||||| |||||    
T  27641763 cggcggcagttcagtgtcgaggaaaacctcggtagttaactgctgagga 27641715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 41500310 - 41500184
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||  | | |||||  |||| |||||||||||||||| | || ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  41500310 tcggcagttaactatcaaagaattcaaaatccggctgcagttaactgccgagaaaaacctcggtagttaactgccgaggatcttctgctacaaatctggc 41500211  T
Q  185 ataagctctctcatctattattcatct 211  Q
    ||||||||||||||| |||||||||||    
T  41500210 ataagctctctcatccattattcatct 41500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 10365837 - 10365746
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattc 207  Q
    |||||| ||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  10365837 cggctgtagttaactgccgaggaaaaccttggtagttaaatgccgaggatcttttgctacaaatctggcataagctctctcatccattattc 10365746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 39393043 - 39393162
Alignment:
Q  94 aactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctct 193  Q
    ||||||||| | ||||||||||||| || ||||||||||| || ||||||||||||||||||||  ||||||||| | |||||||||||  | |||||||    
T  39393043 aactgccgaggtattagaaattcggatgtagttaactgtcgagaaaaacctcggtagttaactgtcgaggatcttctactacaaatctgatagaagctct 39393142  T
Q  194 ctcatctattattcatctca 213  Q
    |||||| |||||||||||||    
T  39393143 ctcatccattattcatctca 39393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 34638138 - 34638262
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||| | |||||||| ||||||||||| ||  ||||||||| ||||||||||||       
T  34638138 tcggcagttaactgccgaggaattagaaattcggtt-cagttaactgccgaggaaaacttcggtagttaattgtcgaggatcttctgctacaaatct--- 34638233  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | ||||||||||||| |||||||||||||    
T  34638234 agaagctctctcatccattattcatctca 34638262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 24512168 - 24512292
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataa 188  Q
    ||||||||||  || |||||| |||  | ||||||||||| || | |  ||||||||||||||||||||| ||||||||| |||||||||||||||| ||    
T  24512168 cagttaactgttgaggaattaaaaaaccagctgcagttaattgccgaaaaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaa 24512267  T
Q  189 gctctctcatctattattcatctca 213  Q
    ||||||||||| |||||||||||||    
T  24512268 gctctctcatccattattcatctca 24512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 43491110 - 43491234
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataa 188  Q
    |||||||||||||| |||||  | |  |||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||| || || |||||||||| ||    
T  43491110 cagttaactgccgaggaatttaataaccggctgcaattaactgtcgaggaaaaccttggtagttaactgccgagaatcttctgttataaatctggcagaa 43491209  T
Q  189 gctctctcatctattattcatctca 213  Q
    ||||||||||| |||||||||||||    
T  43491210 gctctctcatccattattcatctca 43491234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 2920537 - 2920464
Alignment:
Q  140 aacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  2920537 aacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 2920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 2648152 - 2648242
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||| | ||||||| |||||||||||| ||| || |||||| |||||||||||||||| || |||||||||| |||||||||||||    
T  2648152 agttaactgccgaggaaaatctcggtagttaattgccgatgatcttctgctacaaatctggcagaaactctctcatcaattattcatctca 2648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 29093870 - 29093779
Alignment:
Q  119 ctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| || | |||||||||| || |||||||||| ||||||||| |||||||||||||||| |||||||||||   |||||||||||||    
T  29093870 ctgcagttaattgccgaggaaaaccttggcagttaactgccgaggatcttctgctacaaatctggcagaagctctctca---attattcatctca 29093779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 3943268 - 3943189
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | || ||||||||||||||||||||| |||||    
T  3943268 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgagaaaaacctcggtagttaactgccgagga 3943189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 7190027 - 7189948
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  7190027 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacttcggtagttaactgccgagga 7189948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 23346777 - 23346856
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  ||| |||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  23346777 tcggcagttaactgccgaagttttataaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgagga 23346856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 28477139 - 28477070
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| |  |||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  28477139 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacctcggtagttaactgc 28477070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 3795334 - 3795413
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| ||| ||||| ||||| |||||||||||||||| | |||||||||| || |||||||||| |||||    
T  3795334 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaaccttggaagttaactgccgagga 3795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 23347404 - 23347325
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||  | |||||||||||||||| ||||||| |||||    
T  23347404 tcggcagttaactgccgaagttttagaaatccggctgcagttaactaccgaggaaaacctcggtagctaactgccgagga 23347325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 27276450 - 27276371
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||||| | ||||||||||||| |||||| ||| |||||    
T  27276450 tcggcagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaattgccgagga 27276371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 17424155 - 17424212
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  17424155 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 17424212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 1149469 - 1149533
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggta 149  Q
    |||||||||||||||||| ||||| ||||| ||  |||||||||||||| |||||||||||||||    
T  1149469 tcggcagttaactgccgaggaatttgaaatccgattgcagttaactgtcgaggaaaacctcggta 1149533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 25184902 - 25184827
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| ||| ||||| ||||  |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  25184902 gcagttaactgtcgaggaatttgaaac-cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 25184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 24754092 - 24754021
Alignment:
Q  93 taactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||| ||||| |||||||||||||||||||||  | ||||||||||||||| | |||||| |||||    
T  24754092 taactgccgaggaatttgaaattcggctgcagttaactaccgaggaaaacctcggtaataaactgccgagga 24754021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 40679608 - 40679545
Alignment:
Q  150 gttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||| ||||||||| |||||||||||||| | || |||||||||| |||||||||||||    
T  40679608 gttaactgccgaggatcttctgctacaaatctggaagaacctctctcatccattattcatctca 40679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 41183299 - 41183221
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||| ||||||||||| ||||| ||||  |||||||||||||||  | |||||||||||||||||||||||| |||||    
T  41183299 tcggcaattaactgccgaagaatttgaaac-cggctgcagttaactaccgaggaaaacctcggtagttaactgccgagga 41183221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 45137507 - 45137436
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||| | | |||||| ||| |||||||||||    
T  45137507 ggcagttaattgccgaggaattaaaaattcggctgcagttaactgccgatgaaaacttcgatagttaactgc 45137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 43982222 - 43982275
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  43982222 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 43982275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 82307 - 82259
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  82307 cggctgcagttaactgtcgaggaaaacctccgtagttaactgctgagga 82259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 1101128 - 1101072
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||| | |||||||    
T  1101128 tcggcagttaactgccgatgaatttgaaatccggctgtagttaactgccgaggaaaa 1101072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 38945759 - 38945815
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | |||||||    
T  38945759 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 38945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 43943717 - 43943765
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  43943717 cggctgcagttaactgtcgaggaaaaactcggtagttaactgccgagga 43943765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 435342 - 435412
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||  | |||||||||||| ||||| |||||    
T  435342 ggcagttaactgccgatgaatttgaaa-tcggctgcagtaaactaccgaggaaaacctcgatagttgactgc 435412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 3803619 - 3803564
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaa 140  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||    
T  3803619 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaa 3803564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 25964822 - 25964877
Alignment:
Q  99 ccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaa 154  Q
    |||| |||||| |||| |||||||||||||||| | ||||||||||||||||||||    
T  25964822 ccgaggaattaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaa 25964877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 29397927 - 29397986
Alignment:
Q  105 aattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||| || ||||||||||||| | ||||||||||||| |||||||||| |||||    
T  29397927 aattagaaatccgactgcagttaactgccgaggaaaacctcgggagttaactgccgagga 29397986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 45475437 - 45475508
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||||||||  ||||  |||  ||||| |||||||||| | ||||||||||||||||||||||    
T  45475437 tcggcagttaactgccgagaaattcaaaaaccggctacagttaactgccgaggaaaacctcggtagttaact 45475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 20951122 - 20951076
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  20951122 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactg 20951076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 36510932 - 36510870
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcgg 147  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| ||||    
T  36510932 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcgg 36510870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 1096592 - 1096649
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||||| | ||||||||    
T  1096592 tcggctgttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 1096649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 10825215 - 10825288
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| |||||||| |||| |  |||||||| ||||||||  |||||||| ||||||||||||| ||||||||||    
T  10825215 tcggtagttaactaccgaagttttagaaatccggctgcacctaactgtcgaggaaaacctcggcagttaactgc 10825288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 19187299 - 19187226
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||||  ||||  |||| | | |||||||| ||| | ||||||||||||||||||||||||    
T  19187299 tcggcagttaactgccgagaaattcaaaatccagttgcagttacctgccgaggaaaacctcggtagttaactgc 19187226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 30803094 - 30803037
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | ||||||||    
T  30803094 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 30803037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 34639390 - 34639317
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||| ||||||||||  ||||| |||| ||||||||||||||||   |||||||| |||| ||||||||||    
T  34639390 tcggcaggtaactgccgagaaattaaaaatccggctgcagttaactgctgaggaaaacatcgggagttaactgc 34639317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 41009003 - 41008931
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| ||||| | ||  |||||||| ||||||| | |||||||| |||||||||||||||    
T  41009003 tcggcagttaactgccgaggaatttgtaac-cggctgcatttaactgccgaggaaaacttcggtagttaactgc 41008931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 2917680 - 2917752
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    ||||||||||||||||||  ||||  |||  ||||| |||||||||| | ||||||||||| |||||||||||    
T  2917680 tcggcagttaactgccgagaaattgaaaaaccggctacagttaactgccgaggaaaacctcagtagttaactg 2917752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 16580559 - 16580611
Alignment:
Q  161 aggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||| || |||||||||||||||| ||| ||||||||| |||||||||||||    
T  16580559 aggattttctgctacaaatctggcaaaagttctctcatccattattcatctca 16580611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 22003446 - 22003398
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  22003446 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 22003398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 26858170 - 26858238
Alignment:
Q  145 cggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||| ||||||||| ||||||||| |||||||||| || || ||  ||||||||| |||||||||||||    
T  26858170 cggtggttaactgccgaggatcttctgctacaaatgtgacagaaattctctcatcaattattcatctca 26858238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 28468669 - 28468717
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  28468669 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 28468717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 30273207 - 30273147
Alignment:
Q  104 gaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||| |||| ||||| |||||||||| | |||||||||||||||||||| ||| |||||    
T  30273207 gaattaaaaatccggctacagttaactgccgaggaaaacctcggtagttaattgccgagga 30273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 34921830 - 34921762
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||  ||||  |||  ||||||||||||||||   ||||||||||||||||||||||||    
T  34921830 agttaactgccgagaaattcaaaaaccggctgcagttaactgctgaggaaaacctcggtagttaactgc 34921762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 41497476 - 41497540
Alignment:
Q  92 ttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||| |||||  |||  ||||||||||||| || | ||||||||||||||||||||||    
T  41497476 ttaactgccgaagaattcaaaaaccggctgcagttaattgccgaggaaaacctcggtagttaact 41497540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 42177287 - 42177211
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| |||||   ||  ||||||| |||||||  |||||||||| ||||||||||||||| |||||    
T  42177287 gcagttaactgccgaggaattcataaaccggctgctgttaactacctaggaaaacttcggtagttaactgccgagga 42177211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 43870197 - 43870129
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagtta 153  Q
    |||||||||||||||||| |  |||||||| || ||||||||| ||| | |||||||| ||||||||||    
T  43870197 tcggcagttaactgccgaagttttagaaatccgactgcagttagctgccgaggaaaacttcggtagtta 43870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 39489180 - 39489251
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  ||| |||| || ||||||||||||||| |||||||| |||| ||| ||||    
T  39489180 tcggcagttaactgccgaagttttacaaatacgactgcagttaactgtcgaggaaaacttcggcagtaaact 39489251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 41004526 - 41004604
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| | ||  |||||||||||||||| | |  ||||| ||||||||||||||| |||||    
T  41004526 tcggcagttaactgccgaggaatttgtaac-cggctgcagttaactgccgaaaaaaacttcggtagttaactgccgagga 41004604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 43536136 - 43536178
Alignment:
Q  122 cagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||| | |||||||||||||||||||||||| |||||    
T  43536136 cagttaactgccgaggaaaacctcggtagttaactgccgagga 43536178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 3937902 - 3937849
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||||||||||| | ||| ||||||||| |||||||||| |||||    
T  3937902 aaatccggctgcagttaactgccgaggtaaacctcggaagttaactgccgagga 3937849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 5351770 - 5351729
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||| | |||||||||||||||||||||||| |||||    
T  5351770 agttaactgccgaggaaaacctcggtagttaactgccgagga 5351729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 12908505 - 12908432
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| |||  ||||  ||| | ||||||||||||||| | |||||||||| | |||||||||||    
T  12908505 tcggcagttaactgtcgagaaattcaaaaattggctgcagttaactgccgaggaaaaccttgatagttaactgc 12908432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 18000260 - 18000301
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  18000260 cggcggcagttaactgccgaggaaaacctcggtagttaactg 18000301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 23409577 - 23409504
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| |||||| |||||  |||   ||||||||||||||| | ||||||||||||| ||| ||||||    
T  23409577 tcggcagttaattgccgaggaattcaaaaactggctgcagttaactgccgaggaaaacctcggaagtaaactgc 23409504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 23786121 - 23786194
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |||||| |||| ||||  ||||||| |||  || ||| | |||||||||||||||    
T  23786121 tcggcagttaactgccgaggaattaaaaatccggcgacagttaattgttgagaaaatcttcggtagttaactgc 23786194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 30271090 - 30271143
Alignment:
Q  104 gaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||| |||| ||||||||||||||||   |||||||| ||||||||||||||    
T  30271090 gaattaaaaatccggctgcagttaactgctgaggaaaacttcggtagttaactg 30271143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 35490683 - 35490756
Alignment:
Q  91 gttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||| |||||  |||  ||||||||||||||||   | |||||||| ||||||||||||| |||||    
T  35490683 gttaactgccgaagaattcaaaaaccggctgcagttaactgctgaagaaaaccttggtagttaactgccgagga 35490756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 35493417 - 35493344
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| ||||||||||||| |||||  |||  | |||||||||||||| | |||||||  |||||||||||||||    
T  35493417 tcggtagttaactgccgaggaattcaaaaaccagctgcagttaactgccgaggaaaatatcggtagttaactgc 35493344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 2271780 - 2271740
Alignment:
Q  118 gctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| |||||||| |||| ||||||||||    
T  2271780 gctgcagttaactgtcgaggaaaacttcggcagttaactgc 2271740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 7267489 - 7267441
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||| |||||||||||||||| |||||    
T  7267489 cggcggcagttaactgccaaggaaaatctcggtagttaactgccgagga 7267441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 10424839 - 10424907
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||||||||||| |  |||||||| ||||| |||||||||| | |||||||| |||| ||| ||||    
T  10424839 gcagttaactgccgaagttttagaaatacggctacagttaactgccgaggaaaacttcggcagtaaact 10424907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 14456530 - 14456570
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  14456530 cggctgcagttaactgccgaggaaaacctcggcagttaact 14456570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 33222644 - 33222692
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| | |||||||| |||| |||||||||| |||||    
T  33222644 cggctgcagttaactgccgaggaaaacttcggcagttaactgccgagga 33222692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 35490741 - 35490793
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctac 175  Q
    ||||||||| | ||||||||||||||||||||||   ||||||||| ||||||    
T  35490741 agttaactgccgaggaaaacctcggtagttaactatcgaggatcttctgctac 35490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 39947627 - 39947675
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||| ||||||||||||||| |||||    
T  39947627 cggcggcagttaactgccgaggaaaacttcggtagttaactgcagagga 39947675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 41053613 - 41053565
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| | |||||| | ||||||||||||||| |||||    
T  41053613 cggctgcagttaactggcgaggaaatcatcggtagttaactgccgagga 41053565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 42499814 - 42499862
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  42499814 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 42499862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 44100843 - 44100803
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  44100843 cggcggcagttaactgccgaggaaaacctcggtagttaact 44100803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 12464 - 12335
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | | |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  12464 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgatgaaaacctcggtagttaactgccgaggatcttctgctacaaatctggc 12365  T
Q  185 ataagct-ctctcatctattattcatctca 213  Q
    | || || |||||||| |||||||||||||    
T  12364 agaatctactctcatccattattcatctca 12335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 10649 - 10729
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggat 165  Q
    |||||| ||||||||||| |  |||| ||  |||| ||||||||||| | ||| |||||||||||||||||||| ||||||    
T  10649 tcggcaattaactgccgaagttttagtaaaccggcggcagttaactgccgagggaaacctcggtagttaactgccgaggat 10729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 4e-34; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 1041932 - 1042045
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||| | || |||| |||||||||||||||| ||||||||| | |||||||||||||    
T  1041932 tcggcagttaactgccgaggaattagaaatccgactgcagttaactgccgagaaaaatctcggtagttaactgccgaggatcttctactacaaatctggc 1042031  T
Q  185 ataagctctctcat 198  Q
    ||||||||||||||    
T  1042032 ataagctctctcat 1042045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 56138269 - 56138377
Alignment:
Q  105 aattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctatta 204  Q
    ||||| |||| |||||||||||||||| | ||||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||    
T  56138269 aattaaaaatccggctgcagttaactgccgaggaaaacctcagtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccatta 56138368  T
Q  205 ttcatctca 213  Q
    |||||||||    
T  56138369 ttcatctca 56138377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 958665 - 958542
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataa 188  Q
    ||||||||||| ||||||||  |||  ||| |||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||    
T  958665 cagttaactgc-gatgaattcaaaaaccggttgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatccggcagaa 958567  T
Q  189 gctctctcatctattattcatctca 213  Q
    ||||||||||| ||||||| |||||    
T  958566 gctctctcatccattattcttctca 958542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 44561400 - 44561278
Alignment:
Q  91 gttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagc 190  Q
    ||||||||||||  || || |||  |||||||||||||||  | ||||||| |||||||||||||||| ||||||| | |||||||||||||||| ||||    
T  44561400 gttaactgccgagtaaataaaaaaccggctgcagttaactaccgaggaaaatctcggtagttaactgccgaggatcgtctgctacaaatctggcagaagc 44561301  T
Q  191 tctctcatctattattcatctca 213  Q
    ||||||||| |||||||||||||    
T  44561300 tctctcatccattattcatctca 44561278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 9889991 - 9890071
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggat 165  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  9889991 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggat 9890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 28081455 - 28081582
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| |  |||||||| || ||||||||||||| | ||||||| |||| ||||||| ||  ||||||||| |||||||||||||||    
T  28081455 tcggcagttaactgccgaagttttagaaatccgactgcagttaactgccgaggaaaatctcgttagttaagtgtcgaggatcttctgctacaaatctggc 28081554  T
Q  185 ataagct-ctctcatctattattcatct 211  Q
    | || || |||||||| |||||||||||    
T  28081555 agaatctcctctcatccattattcatct 28081582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 34154440 - 34154376
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  34154440 agttaactgcagaggatcttctgctacaaatctggcagaagctctctcatctattattcatctca 34154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 15995719 - 15995798
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |||||| ||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  15995719 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 15995798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 19069184 - 19069263
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |||||| ||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  19069184 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 19069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 21022964 - 21022885
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  21022964 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 21022885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 29700347 - 29700268
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctct 195  Q
    |||||||||||||||| | |||||||||||||||||||| ||| || |||||| |||||||||||||||| |||||||||    
T  29700347 cggctgcagttaactgccgaggaaaacctcggtagttaattgccgatgatcttctgctacaaatctggcagaagctctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 15999875 - 15999796
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||||||  |||| ||||| |||||||| ||||||| | |||||||||||||||||||||||| |||||    
T  15999875 tcggcagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgagga 15999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 16984237 - 16984158
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  16984237 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgccgagga 16984158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 51492068 - 51492147
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||| ||||||| ||| |  |||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  51492068 tcggcaattaactgtcgaagttttagaaatccggctgcagttaactgcctaggaaaacctcggtagttaactgccgagga 51492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 39590644 - 39590571
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |  |||||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  39590644 tcggcagttaactgccgaagttttagaaatacagctgcagttaactgccgaggaaaacctcggtagttaactgc 39590571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 42885496 - 42885576
Alignment:
Q  135 aggaaaacctcggtagttaactgcggaggatcttttgctacaaa--tctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||| |||||||||| || |||||| |||||||||  ||||||| ||||||||||||| |||||||||||||    
T  42885496 aggaaaacctcggcagttaactgccgatgatcttctgctacaaaaatctggcagaagctctctcatccattattcatctca 42885576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 21018054 - 21017951
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctttt--gctacaaatctggcataagct-ctctcatctattattc 207  Q
    |||| |||||||| ||||||| | ||||||||||||| |||||||||| || |||||| |  ||||||||||||||| || || ||||||||||||||||    
T  21018054 aaatccggctgcaattaactgccgaggaaaacctcggcagttaactgccgatgatcttctgagctacaaatctggcagaatctcctctcatctattattc 21017955  T
Q  208 atct 211  Q
    ||||    
T  21017954 atct 21017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 34530807 - 34530743
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| |||||||||| ||||| ||||||||||||| |||||||||||||    
T  34530807 agttaactgccgaggatcttctgctacaaatttggcagaagctctctcatccattattcatctca 34530743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 39588127 - 39588191
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| |||||||||| ||||| ||||||||||||| |||||||||||||    
T  39588127 agttaactgccgaggatcttctgctacaaatatggcagaagctctctcatccattattcatctca 39588191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 4786360 - 4786295
Alignment:
Q  135 aggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatct 200  Q
    |||||||||||||| ||||||||| || |||||| |||||||||||||| | ||||||||||||||    
T  4786360 aggaaaacctcggttgttaactgccgatgatcttctgctacaaatctggtagaagctctctcatct 4786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 6178160 - 6178103
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  6178160 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 6178103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 16983519 - 16983592
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |  |||||||| ||||| |||||||||| | || |||||||||||||||||||||    
T  16983519 tcggcagttaactgccgaagttttagaaatccggctacagttaactgccgagaaaaacctcggtagttaactgc 16983592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 49094107 - 49094164
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  49094107 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 49094164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 55793943 - 55794047
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttg--ctac-aaatctggcataagct-ctctcatctattatt 206  Q
    |||| |||||||||||||||| | ||||||||||||| |||||||||| ||||||||| ||  |||| |||||||||| || || |||||||| ||||||    
T  55793943 aaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 55794042  T
Q  207 catct 211  Q
    |||||    
T  55794043 catct 55794047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 41023385 - 41023461
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    ||||||||||||||||  |||| ||||| ||||||||||||||||   |||||| ||||||||||||||||| ||||    
T  41023385 ggcagttaactgccgagaaatttgaaatccggctgcagttaactgctgaggaaatcctcggtagttaactgccgagg 41023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 51429341 - 51429277
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||  ||||||||| |||||||||||||| | ||||||||||||| |||||||||||||    
T  51429341 agttaactgtcgaggatcttctgctacaaatctggaagaagctctctcatccattattcatctca 51429277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 56304911 - 56304975
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||| ||| |||||| || |||||||||||||||| ||||||||||||| |||||||||||||    
T  56304911 agttaattgccgaggattttctgctacaaatctggcagaagctctctcatccattattcatctca 56304975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 955791 - 955862
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||| || |||||  ||| ||||||||||||||||| | || |||||||||||||||||||||    
T  955791 ggcagttaactgctgaggaattcaaaaatcggctgcagttaactgccgagaaaaacctcggtagttaactgc 955862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 50274757 - 50274812
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaa 140  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||| | ||||||    
T  50274757 tcggcagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaa 50274812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 55407858 - 55407791
Alignment:
Q  96 ctgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    ||||||| |||||| |||| |||||||||||||||| | ||||||| |||||||||||||||| ||||    
T  55407858 ctgccgaggaattaaaaatccggctgcagttaactgccgaggaaaatctcggtagttaactgccgagg 55407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 6283479 - 6283417
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatct 211  Q
    |||||||||| ||||||||| |||| ||||||||||  ||||||||||||| |||||||||||    
T  6283479 agttaactgccgaggatcttctgcttcaaatctggccgaagctctctcatccattattcatct 6283417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 39588089 - 39588135
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  39588089 tcggcagttaactgccgaggaattagaaattcgactgcagttaactg 39588135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 38464811 - 38464770
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  38464811 cggctgcagttaactgtcaaggaaaacctcggtagttaactg 38464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 41795406 - 41795349
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctt 168  Q
    |||| |||||||||||||||| | |||||||||||| ||||||||||| |||||||||    
T  41795406 aaatccggctgcagttaactgccgaggaaaacctcgttagttaactgccgaggatctt 41795349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 50278870 - 50278817
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||| ||||||||||||||| |||||||||||||||| | ||||||||    
T  50278870 cagttaactgtcgatgaattagaaatccggctgcagttaactgccgaggaaaac 50278817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 3403844 - 3403900
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | |||||||    
T  3403844 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 3403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 37022120 - 37022064
Alignment:
Q  102 atgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||| |||||||||||||||||||||  | ||||||||||||| ||||||||||    
T  37022120 atgaatttgaaattcggctgcagttaactaccgaggaaaacctcggcagttaactgc 37022064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 21015736 - 21015815
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||| ||| |  |||||||| ||| ||||||||||||   ||| |||||||||||||||||||| |||||    
T  21015736 tcggcagttaactgtcgaagttttagaaatacgggtgcagttaactgctgagggaaacctcggtagttaactgccgagga 21015815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 40833686 - 40833615
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  40833686 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 40833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 50447005 - 50447076
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  ||| |||| |||||||||||||||||| |||||||| |||| ||| ||||    
T  50447005 tcggcagttaactgccgaagttttaaaaatacggctgcagttaactgtcgaggaaaacttcggcagtaaact 50447076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 8109393 - 8109467
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||| ||| |||||| | || ||||| |||||||||| | ||||||||||||| |||||||||| |||||    
T  8109393 agttaactgtcgaggaattaaatatccggctacagttaactgccgaggaaaacctcgggagttaactgctgagga 8109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 11494571 - 11494613
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  11494571 cggctgcagttaactgccgaggaaaacctcggtagttaactgc 11494613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 19073712 - 19073658
Alignment:
Q  104 gaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||| ||||| |||||||||||||||| | |||||| |||||||||||||||||    
T  19073712 gaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgc 19073658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 20208538 - 20208580
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  20208538 cggctgcagttaactgccgaggaaaacctcggtagttaactgc 20208580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 38460456 - 38460502
Alignment:
Q  118 gctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||    
T  38460456 gctgcagttaactgtcgaggaaaacctcggtaattaactgccgagga 38460502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 67626 - 67667
Alignment:
Q  122 cagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  67626 cagttaactgtcgaggaaaacctcggtagttaactgccgagg 67667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 38369258 - 38369201
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | ||||||||    
T  38369258 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 38369201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 1044595 - 1044539
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||| ||||||||| |||||  ||||||||||||||| | |||||||    
T  1044595 tcggcagttaactgtcgatgaatttgaaatctggctgcagttaactgccgaggaaaa 1044539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 21472560 - 21472504
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||||| | |||||||    
T  21472560 tcggcagttaactgccgaggaattcaaaaatcggctgcagttaactgccgaggaaaa 21472504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 30726786 - 30726738
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  30726786 cggcagcagttaactgccgaggaaaacctcggtagttaactgccgagga 30726738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 31425363 - 31425315
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  31425363 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 31425315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 34151616 - 34151684
Alignment:
Q  90 agttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||| ||||||  ||||  ||| ||||||||||||||||| | ||||||||||||||||| ||||||    
T  34151616 agttaaatgccgagtaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagtaaactgc 34151684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 37563325 - 37563277
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  37563325 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 37563277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 39773432 - 39773480
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  39773432 cggcagcagttaactgccgaggaaaacctcggtagttaactgccgagga 39773480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 40358325 - 40358277
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  40358325 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 40358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 48256635 - 48256571
Alignment:
Q  94 aactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||| || |||||| |||| |||||||||||||||| | |||||||| || ||||||||||||    
T  48256635 aactgcagaagaattaaaaatccggctgcagttaactgccgaggaaaacttcagtagttaactgc 48256571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 49572972 - 49572904
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||| ||| |||||  | | ||||||||||||||||| | ||||||||||||||||| |||||    
T  49572972 cagttaactgtcgaggaattcaataatcggctgcagttaactgccgaggaaaacctcggtagtaaactg 49572904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 54634060 - 54634012
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  54634060 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 54634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 72510 - 72545
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| ||||||||||||||||||||||||    
T  72510 agttaactgtcgaggaaaacctcggtagttaactgc 72545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 14200558 - 14200629
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||| ||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  14200558 tcggcagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 14200629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 44051168 - 44051089
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||| |||||||||||| ||| ||  ||  |||||||||||||||  | |||||| ||||||||||||||||| |||||    
T  44051168 tcggcggttaactgccgaggaaataagaaaccggctgcagttaactcccgaggaaatcctcggtagttaactgccgagga 44051089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 46254524 - 46254453
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||| ||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  46254524 tcggtagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 46254453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 51037544 - 51037473
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| |||||||| ||||||| | |||||||| |||| ||| ||||    
T  51037544 tcggcagttaactgccgaagttttagaaatacggctgcaattaactgccgaggaaaacttcggcagtaaact 51037473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 17342142 - 17342212
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||| |||||   || ||||||||||||||||  | || ||||| |||||||||||||||    
T  17342142 gcagttaactgccgaggaattcataaatcggctgcagttaactaccgagaaaaacttcggtagttaactgc 17342212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 34154478 - 34154432
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||||| |||||| |||  ||||||||||||||||    
T  34154478 tcggcagttaactgccgaggaattaaaaaaccggctgcagttaactg 34154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 243357 - 243296
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatc 210  Q
    |||||||||  ||||||||| || ||||||||||||| |||||||||||   ||||||||||    
T  243357 agttaactgtcgaggatcttctgttacaaatctggcagaagctctctcactcattattcatc 243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 23220677 - 23220746
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||| |  |||||||| |||||||||||||||| | | |||||| |||| ||| ||||    
T  23220677 ggcagttaactgccgaagttttagaaatacggctgcagttaactgccgatgaaaacttcggcagtaaact 23220746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 26932619 - 26932660
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||| | |||||||||||||||||||||||| |||||    
T  26932619 agttaactgccgaggaaaacctcggtagttaactgccgagga 26932660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 51426538 - 51426607
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||| ||| |||||  ||| |||||||||||||| || | || |||||||| ||||||||||||    
T  51426538 cagttaactgtcgaggaattcaaaaatcggctgcagttaattgccgagaaaaacctcagtagttaactgc 51426607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 52529240 - 52529281
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||| ||||||||||| | ||||||||||||||||||||||    
T  52529240 tcggcggcagttaactgccgaggaaaacctcggtagttaact 52529281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 1089629 - 1089581
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  1089629 cggcggcagttaaatgccgaggaaaacctcggtagttaactgccgagga 1089581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 6175905 - 6175953
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  6175905 cggcggcagttaagtgccaaggaaaacctcggtagttaactgccgagga 6175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 37959763 - 37959723
Alignment:
Q  118 gctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| | |||||||| |||||||||||||||    
T  37959763 gctgcagttaactgccgaggaaaacatcggtagttaactgc 37959723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 41793392 - 41793440
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  41793392 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 41793440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 49169142 - 49169094
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||| |||||||||||||||||| |||||    
T  49169142 cggcggcagttaactgccgaggaatacctcggtagttaactgccgagga 49169094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 13972061 - 13972187
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||| ||||||| |||||| ||| | ||||||||||||| | | ||||||||||||||| | ||| || ||||||||| |||||||||||||||    
T  13972061 tcggcagtta-ctgccgaggaattaaaaact-ggctgcagttaacagccgaggaaaacctcggtattaaacagccgaggatcttctgctacaaatctggc 13972158  T
Q  185 ataagctctctcatctattattcatctca 213  Q
    | |||||||||||||||||||||||||||    
T  13972159 agaagctctctcatctattattcatctca 13972187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 42572802 - 42572705
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||||||||||| |||    ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  42572802 cggctgcagttaactgtcgaggttttcctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 42572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 29763242 - 29763167
Alignment:
Q  138 aaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  29763242 aaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 29763167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 6434755 - 6434873
Alignment:
Q  95 actgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctc 194  Q
    |||| |||||||||| ||| ||||||||||||| |||   |||||||| |||||||||||||||  |||||||| |||||||||||||| | |||| |||    
T  6434755 actgtcgatgaattaaaaaatcggctgcagttatctgctaaggaaaacttcggtagttaactgccaaggatcttctgctacaaatctggtagaagcactc 6434854  T
Q  195 tcatctattattcatctca 213  Q
    ||||| |||||||||||||    
T  6434855 tcatccattattcatctca 6434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 44336249 - 44336319
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  44336249 gcagttaactgtcgaggaattagaaattcggctgcagttaactgccgaggaaaacctcggtagttaactgc 44336319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 6557912 - 6557985
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  6557912 tcggcagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaatctcggtagttaactgc 6557985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 52802127 - 52802200
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  52802127 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgc 52802200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 49395631 - 49395715
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatct 200  Q
    |||||||||||||||| |||||    ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  49395631 cggctgcagttaactgcctaggttttcctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatct 49395715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 6562237 - 6562158
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  6562237 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagga 6562158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 44470087 - 44470008
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  44470087 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 44470008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 27487678 - 27487614
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  27487678 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 27487614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 15047279 - 15047358
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | |||||  ||||||||||||||||| |||||    
T  15047279 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaattcctcggtagttaactgccgagga 15047358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 19161889 - 19161968
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  19161889 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 19161968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 29435004 - 29435097
Alignment:
Q  119 ctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||  | | || ||||||||||||||||||| |||||| ||||||||||||| ||||| ||| ||||||||| |||||||||||||    
T  29435004 ctgcagttaacttccgatgacaacctcggtagttaactgcagaggat-ttttgctacaaatttggcagaagttctctcatccattattcatctca 29435097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 19159646 - 19159750
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatctttt--gctac-aaatctggcataagct-ctctcatctattatt 206  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||| |  ||||| |||||||||| || || |||||||| ||||||    
T  19159646 aaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgaggatcttctgcgctacaaaatctggcagaatctcctctcatccattatt 19159745  T
Q  207 catct 211  Q
    |||||    
T  19159746 catct 19159750  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 9711724 - 9711648
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| ||||||||||| |||  ||||||||||| | ||||||||||||| |||||||||| |||||    
T  9711724 gcagttaactgccgaggaattagaaatccggtcgcagttaactgccgaggaaaacctcgggagttaactgccgagga 9711648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 11183187 - 11183255
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    ||||||||||| || |||||| |||| |||||||||||||||| | |||||||||||||||||||||||    
T  11183187 cagttaactgctgaggaattaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactg 11183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 14174923 - 14174859
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||||||||| ||||| |||||||||| ||||||||||||| |||||||||||||    
T  14174923 agttaactgccgaggatcttctgctaaaaatctggcagaagctctctcatccattattcatctca 14174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 23359425 - 23359346
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |||||| ||||| ||||| |||||||||||||||  | ||||||||||||||||| |||||| |||||    
T  23359425 tcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 23359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 48751486 - 48751407
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||| | ||||||||| |||||| |||| ||||||||||||| || | |||||||||||||||||||||||| |||||    
T  48751486 tcggcactgaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgagga 48751407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 13147527 - 13147621
Alignment:
Q  119 ctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||  | ||||||||||||  |||||||||  || |||||| |||||||||||||| | || |||||||||| |||||||||||||    
T  13147527 ctgcagttaactaccgaggaaaacctcgacagttaactgtcgatgatcttctgctacaaatctggtaaaaactctctcatccattattcatctca 13147621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 23276184 - 23276110
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcg 159  Q
    ||||||||||||||| || |||||| |||| ||||| |||||||||| | |||||||||||| ||||||||||||    
T  23276184 tcggcagttaactgctgaggaattaaaaatccggctacagttaactgccgaggaaaacctcgatagttaactgcg 23276110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 49927513 - 49927451
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatct 211  Q
    |||||||| | ||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  49927513 agttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 49927451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 26637257 - 26637204
Alignment:
Q  160 gaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  26637257 gaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 26637204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 51271667 - 51271594
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |  |||||||| ||||||||||||| || | |||||||||||||| |||||||||    
T  51271667 tcggcagttaactgccgaagttttagaaatccggctgcagttaattgccgaggaaaacctcggtggttaactgc 51271594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 13636172 - 13636116
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatct 167  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  13636172 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatct 13636116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 41804109 - 41804037
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||||| |||||  |||  || ||||||||||||| | |||||||||||||||||||||||    
T  41804109 tcggcagttaactgccgaggaattcaaaaaccgactgcagttaactgccgaggaaaacctcggtagttaactg 41804037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 50617219 - 50617281
Alignment:
Q  104 gaattagaaatt--cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  50617219 gaattagaaatttccggctgcagttaactgtcaaggaaaacctcgggagttaactgccgagga 50617281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 35258948 - 35258870
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagg 163  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||   | |||||||||||| | ||||||||| ||||    
T  35258948 tcggcagttaactgccgaggaattaaaaatccggctgcagttaacacccgaggaaaacctcgatggttaactgccgagg 35258870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 24364801 - 24364680
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatcttttgctacaaatctggc 184  Q
    |||||||||||||||||| ||  |  ||| |||| |||||||||||    ||||||||||||  |||||||||| || |  || ||||||||||||||||    
T  24364801 tcggcagttaactgccgaggaggtttaaaatcggttgcagttaactactgaggaaaacctcgacagttaactgccgatgcgctcttgctacaaatctggc 24364702  T
Q  185 ataagctctctcatctattatt 206  Q
    | |||||||| |||| ||||||    
T  24364701 agaagctctcacatccattatt 24364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 46141779 - 46141852
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| |||||  | |  |||||||||||||||| | |||||||| |||||||||||||||    
T  46141779 tcggcagttaactgccgaggaattcaataaccggctgcagttaactgccgaggaaaacatcggtagttaactgc 46141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 51290036 - 51289963
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||| | || |||||| |||| ||| |||||||||||| | ||||||||||||||||||| ||||    
T  51290036 tcggcagttaactactgaggaattaaaaatccggttgcagttaactgccgaggaaaacctcggtagttagctgc 51289963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 38689959 - 38690007
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  38689959 cggctgcagttaactgccaaggaaaacctcggtagttaactgccgagga 38690007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 44596896 - 44596960
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| ||| ||||| |||||||||| ||||| || |||||||||| |||||||||||||    
T  44596896 agttaactgctgagtatcttctgctacaaatttggcagaaactctctcatccattattcatctca 44596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 586681 - 586610
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  586681 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 586610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 2425761 - 2425682
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  || ||||| ||||||||||||||||   |||| || |||||||||||||||| |||||    
T  2425761 tcggcagttaactgccgaagttttggaaatccggctgcagttaactgctgaggagaatctcggtagttaactgccgagga 2425682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 19054296 - 19054253
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  19054296 tcggctgcagttaactgccaaggaaaacctcggtagttaactgc 19054253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 30194418 - 30194489
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  30194418 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 30194489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 36072396 - 36072439
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  36072396 tcggctgcagttaactgccgaggaaaacctcggtagttaactgc 36072439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 46886463 - 46886385
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| |  |||||||| |||||| |||||| || | ||||||| |||||||||||||||| |||||    
T  46886463 tcggcagttaactgccgaagttttagaaatccggctgtagttaagtgccgaggaaaa-ctcggtagttaactgccgagga 46886385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 49426750 - 49426813
Alignment:
Q  151 ttaactgcggaggatcttttgctacaaatctggcataagct-ctctcatctattattcatctca 213  Q
    |||||||| ||||||||| |||||||||||||||| || || |||||||| |||||||||||||    
T  49426750 ttaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 49426813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 9710596 - 9710654
Alignment:
Q  106 attagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||| |||||||||||||||| | |||||||| |||| |||||||||| |||||    
T  9710596 attagaaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgagga 9710654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 51288884 - 51288930
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  51288884 tcggcagttaactaccgaggaattagaaatccggctgcagttaactg 51288930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 1656131 - 1656086
Alignment:
Q  119 ctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||    
T  1656131 ctgcagttaactgtcgagaaaaacctcggtagttaactgccgagga 1656086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 7981206 - 7981145
Alignment:
Q  94 aactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaac 155  Q
    |||||||||  ||||| ||| ||||||||| ||||||| | |||||||||||||||||||||    
T  7981206 aactgccgagaaattaaaaaatcggctgcaattaactgccgaggaaaacctcggtagttaac 7981145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 8460172 - 8460100
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| |||||||  |||| ||||| ||||| |||||||||||||||| | ||||||| ||||||||||||||||    
T  8460172 tcggtagttaacaaccgaggaatttgaaat-cggctgcagttaactgccaaggaaaatctcggtagttaactgc 8460100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 19499184 - 19499115
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| ||  ||||  ||||||||||||||||||||| | ||||||||||| || |||||||||    
T  19499184 cagttaactgctgagaaatttaaaattcggctgcagttaactgccgaggaaaacctcagtcgttaactgc 19499115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 22345258 - 22345330
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| ||||| ||||  |||||||||||||||| | |  ||| |||||||||||||||||    
T  22345258 tcggcagttaactgccgaggaatttgaaac-cggctgcagttaactgccgaaaaaatcctcggtagttaactgc 22345330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 30910079 - 30910022
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||| ||| ||||| ||||| |||||||||||||||| | ||||||||    
T  30910079 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaac 30910022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 46216425 - 46216474
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| || |||||||| ||||||||||||||| |||||    
T  46216425 tcggctgcagttaactatcgaggaaaacttcggtagttaactgccgagga 46216474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 3728763 - 3728811
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  3728763 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 3728811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 3944002 - 3944050
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  3944002 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 3944050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 3993888 - 3993840
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  3993888 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 3993840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 8548714 - 8548666
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  8548714 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 8548666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 19521625 - 19521685
Alignment:
Q  104 gaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |||||||||||| ||| | |||| || |||||||||||||||| |||||    
T  19521625 gaattagaaatccggctgcagttacctgccaaggataatctcggtagttaactgccgagga 19521685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 20349454 - 20349510
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    ||||||||||||| |||| ||||| ||||| |||||||||||||||| | |||||||    
T  20349454 tcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 20349510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 41453835 - 41453891
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||| | |||||||    
T  41453835 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 41453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 44338264 - 44338216
Alignment:
Q  163 gatcttttgctacaaatctggcataagctctctcatctattattcatct 211  Q
    |||||| ||||||||||||  |||||| |||||||||||||||||||||    
T  44338264 gatcttctgctacaaatctatcataagttctctcatctattattcatct 44338216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 49927589 - 49927517
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||||||| |||||  |||  |||||  ||||||||| | || ||||||||||||||||||||    
T  49927589 tcggcagttaactgccgaagaatttaaaaaccggctatagttaactgccgagaaaaacctcggtagttaactg 49927517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 4883234 - 4883301
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||| |  |||||||| |||||||||||||||| | |||||||| |||| ||| ||||    
T  4883234 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaact 4883301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 26633530 - 26633597
Alignment:
Q  91 gttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||| |||| |||||  |||  ||| |||||||||||| | ||||||||||||||||||||||||    
T  26633530 gttaactaccgaagaattcaaaaaccggttgcagttaactgccgaggaaaacctcggtagttaactgc 26633597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 46217394 - 46217315
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||| |||||| |  | | ||| ||||||||||||||||  | |||||||| ||||||||||||||| |||||    
T  46217394 tcggcagttaattgccgaagtttgaaaaaatcggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 46217315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 46973203 - 46973273
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| |||||  |||  |||||||||||||||| | |||||||||||  |||||||||||    
T  46973203 ggcagttaactgccgaggaattcaaaaaccggctgcagttaactgccgaggaaaacctc-atagttaactgc 46973273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 15051393 - 15051351
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  15051393 cggcggcagttaactgccgaggaaaacctcggtagttaactgc 15051351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 19914463 - 19914525
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcgg 147  Q
    ||||||||||||| |||| |  |||||||| |||||||||||||||| | |||||||| ||||    
T  19914463 tcggcagttaacttccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcgg 19914525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 26879340 - 26879298
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  26879340 cggcggcagttaactgccgaggaaaacctcggtagttaactgc 26879298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 27485056 - 27485102
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    |||||||||||||||| | |||||| |||| ||||||||||||||||    
T  27485056 tcggcagttaactgcctaggaattaaaaatccggctgcagttaactg 27485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 29709309 - 29709259
Alignment:
Q  163 gatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||||| |||||| ||| ||||||| ||||| |||||||||||||    
T  29709309 gatcttttgctataaatctagcagaagctctttcatccattattcatctca 29709259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 30905768 - 30905814
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  30905768 tcggcagttaactgccgagaaatttgaaatccggctgcagttaactg 30905814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 49857925 - 49857879
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||||||||||||||||  ||| || ||||||||||||||    
T  49857925 tcggcagttaactgccgatgaatttaaaaatcagctgcagttaactg 49857879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 51337587 - 51337541
Alignment:
Q  87 ggcagttaactgccgatgaattagaaattcggctgcagttaactgtc 133  Q
    |||||||||||||||| |||||| |||  ||||||||||||||||||    
T  51337587 ggcagttaactgccgaggaattaaaaaaccggctgcagttaactgtc 51337541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 3941223 - 3941147
Alignment:
Q  88 gcagttaactgccgatgaatt-agaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| ||||| | ||| | ||||||||||||||  | |||||||| ||||||||||||||| |||||    
T  3941223 gcagttaactgccgaggaattcataaact-ggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 3941147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 6437615 - 6437542
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||||| ||| |  | | ||| ||||||||||||  | ||||||||||||||||||| ||||    
T  6437615 tcggcagttaactgccgaggaagtcaataatcgactgcagttaactaccaaggaaaacctcggtagttatctgc 6437542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 29438096 - 29438023
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||||||| ||   |||| |||  |||||||||||||||  | ||||||||||||||| ||||||||    
T  29438096 tcggcagttaactgcagaaatattaaaaaaccggctgcagttaactaccgaggaaaacctcggtaattaactgc 29438023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 29765605 - 29765548
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| |  |||||||| ||| |||||||||||| | ||||||||    
T  29765605 tcggcagttaactgccgaagttttagaaatccggttgcagttaactgccgaggaaaac 29765548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 38119651 - 38119614
Alignment:
Q  121 gcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  38119651 gcagttaactgccgaggaaaacctcggtagttaactgc 38119614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 44598960 - 44598903
Alignment:
Q  107 ttagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||| |||||||||||||||| | |||||||| |||| |||||||||| |||||    
T  44598960 ttagtaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgagga 44598903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 51269010 - 51269063
Alignment:
Q  160 gaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||| |||||||||| | ||| ||||||||||||  |||||||||||||    
T  51269010 gaggatcttctgctacaaatttagcagaagctctctcattcattattcatctca 51269063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 52805609 - 52805552
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaac 142  Q
    |||||||||||||||||| ||||| ||||| |||||| |||||| || | ||||||||    
T  52805609 tcggcagttaactgccgacgaatttgaaatccggctgtagttaattgccgaggaaaac 52805552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 4208454 - 4208502
Alignment:
Q  161 aggatcttttgctacaaatctggcataagctctctcatctattattcat 209  Q
    |||||||| ||||||||||||  || ||||||||||||| |||||||||    
T  4208454 aggatcttctgctacaaatctaccagaagctctctcatccattattcat 4208502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 20353980 - 20353932
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||| ||||||||||||||| |||||    
T  20353980 cggcggcagttaactgccgaggaaaacttcggtagttaactgccgagga 20353932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 25040152 - 25040080
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactg 157  Q
    |||||||||||||| |||  ||||  |||  ||||| ||||||| |||| |||||||||| ||||||||||||    
T  25040152 tcggcagttaactgtcgagaaattttaaaaccggcttcagttaattgtcgaggaaaaccttggtagttaactg 25040080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 29424408 - 29424456
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||  | |||||||| ||||||||||||||| |||||    
T  29424408 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 29424456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 29622469 - 29622421
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  29622469 cggcggcagttaattgccgaggaaaacctcggtagttaactgccgagga 29622421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 38771657 - 38771705
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  38771657 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 38771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 828 - 907
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||| | |||||||||||||||||||||||| |||||    
T  828 tcggcagttaactgcctaggaatttgaaattcggctgtagttaactgccgaggaaaacctcggtagttaactgccgagga 907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 5359 - 5407
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  5359 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 892 - 933
Alignment:
Q  123 agttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||| | |||||||||||||||||||||||| |||||    
T  892 agttaactgccgaggaaaacctcggtagttaactgccgagga 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 17427 - 17348
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  17427 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagga 17348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 22400 - 22479
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||   ||||||| |||||||||||||||| |||||    
T  22400 tcggcagttaactgccgaggaatttgaaattcggctgcagttaactgctgaggaaaatctcggtagttaactgccgagga 22479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 510 - 439
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| ||||||  ||| |||||||||||||||||| ||||||||||||| ||||||||    
T  510 tcggcagttaactgccgaagaattaataatccggctgcagttaactgtcgaggaaaacctcgggagttaact 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 18918 - 18847
Alignment:
Q  142 cctcggtagttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    ||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||    
T  18918 cctcggtagttaactgtcgaggatcttctgctacaaatctggcagaagctttctcatccattattcatctca 18847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 16031 - 15960
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| ||||| ||||| | |||||||||||||| | ||||||||||||||||||||||    
T  16031 tcggcagttaactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaact 15960  T

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Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 11298 - 11343
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaact 130  Q
    |||||||||||||||||| ||||| ||| | |||||||||||||||    
T  11298 tcggcagttaactgccgaggaatttgaattccggctgcagttaact 11343  T

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Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 232895 - 232829
Alignment:
Q  98 gccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||| |||||| ||||||||||||| ||||||| | |||||||||||||||||||||||| |||||    
T  232895 gccgaggaattaaaaattcggctgcaattaactgccgaggaaaacctcggtagttaactgccgagga 232829  T

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Target: scaffold0618 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 3882 - 3951
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaa 154  Q
    |||||||||||||| ||| |||||  ||| ||||||||||||||||| | ||||||||||||||||||||    
T  3882 tcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaa 3951  T

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Target: scaffold0219 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 20185 - 20109
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| |||||  ||| |||||| |||||||||||| |||||| ||||||||||| ||||| |||||    
T  20185 gcagttaactgccgaggaattcaaaaatcggctacagttaactgtcgaggaaatcctcggtagtttactgccgagga 20109  T

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Target: scaffold0794 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 5269 - 5347
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||| ||||||||||| ||||| ||||  |||||||||||||||  | |||||||||||||||||||||||| |||||    
T  5269 tcggcaattaactgccgaagaatttgaaac-cggctgcagttaactaccgaggaaaacctcggtagttaactgccgagga 5347  T

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Target: scaffold0361 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 4476 - 4397
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||| | ||||||||||||| |  | |||||| ||||||||||||||||| |||||    
T  4476 tcggcagttaactgccgaggaatttgaactccggctgcagttaaataccgaggaaatcctcggtagttaactgccgagga 4397  T

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Target: scaffold0513 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8196 - 8269
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||||| | ||||| ||||| ||| ||||||||||||   | ||||||||||||||||||||||    
T  8196 tcggcagttaactgccaaggaatttgaaatccggatgcagttaactgctgaagaaaacctcggtagttaactgc 8269  T

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Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 18369 - 18296
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||| |||||||||||| |  |||||||| || |||||||| |||||| | ||||||||||||||||||||||    
T  18369 tcggcggttaactgccgaagttttagaaatccgactgcagtttactgtcgaagaaaacctcggtagttaactgc 18296  T

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Target: scaffold0184; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 18032 - 18099
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||| ||||||||||  |||||||||||||||| | || ||| |||||| ||||||||    
T  18032 cagttaactgccgaggaattagaaacccggctgcagttaactgccgagtaaatcctcgggagttaact 18099  T

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Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 54475 - 54548
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    ||||| |||||||||||| |  |||||||| || |||||||| |||||| | ||||||||||||||||||||||    
T  54475 tcggcggttaactgccgaagttttagaaatccgactgcagtttactgtcgaagaaaacctcggtagttaactgc 54548  T

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Target: scaffold0078; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 54812 - 54745
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||| ||||||||||  |||||||||||||||| | || ||| |||||| ||||||||    
T  54812 cagttaactgccgaggaattagaaacccggctgcagttaactgccgagtaaatcctcgggagttaact 54745  T

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Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 857 - 921
Alignment:
Q  149 agttaactgcggaggatcttttgctacaaatctggcataagctctctcatctattattcatctca 213  Q
    |||||||||| |||||||||   |||||||||||||| ||||||||| ||| |||||||||||||    
T  857 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 921  T

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Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 826 - 865
Alignment:
Q  92 ttaactgccgatgaattagaaattcggctgcagttaactg 131  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  826 ttaactgccgaagaattagaaatccggctgcagttaactg 865  T

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Target: scaffold0101 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 36584 - 36528
Alignment:
Q  111 aaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggaggatct 167  Q
    |||| |||||||| ||||||| | |||||||||||||||||||||||| ||||||||    
T  36584 aaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgaggatct 36528  T

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Target: scaffold0101; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 41067 - 41019
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| |||||    
T  41067 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 41019  T

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Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 1256 - 1178
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||||||||||||||||| ||||| ||||  |||| ||| ||||||| | ||||||||||||| |||||||||| |||||    
T  1256 tcggcagttaactgccgaggaatttgaaac-cggcagcaattaactgccgaggaaaacctcggaagttaactgccgagga 1178  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 65345 - 65394
Alignment:
Q  115 tcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||||||| |||||||| |||| |||||||||| |||||    
T  65345 tcggctgcagttaactgtcgaggaaaacttcggcagttaactgccgagga 65394  T

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Target: scaffold1500 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 832 - 756
Alignment:
Q  88 gcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    ||||||||||||||| |||||   ||  ||||||| |||||||  |||||||||| ||||||||||||||| |||||    
T  832 gcagttaactgccgaggaattcataaaccggctgctgttaactacctaggaaaacttcggtagttaactgccgagga 756  T

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Target: scaffold0744 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 468 - 420
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  468 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 420  T

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Target: scaffold0293 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 767 - 719
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  767 cggcggcagttaactgcccaggaaaacctcggtagttaactgccgagga 719  T

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Target: scaffold0260 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 11777 - 11833
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaa 141  Q
    ||||||||||||| |||| ||||| ||||| |||||||||||||||| | |||||||    
T  11777 tcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 11833  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 50075 - 50123
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||    
T  50075 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 50123  T

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Target: scaffold0388 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 13009 - 13076
Alignment:
Q  89 cagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    ||||||| |||||| |||||  ||| |||||||||||||| |||| |||||||| |||| ||||||||    
T  13009 cagttaattgccgaagaatttaaaaatcggctgcagttaattgtcaaggaaaacttcggcagttaact 13076  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 69297 - 69226
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaact 156  Q
    |||||||||||||||||| |  |||||||| ||| |||||||||||||| | |||||| |||| ||| ||||    
T  69297 tcggcagttaactgccgaagttttagaaatacggatgcagttaactgtcgaagaaaacttcggcagtaaact 69226  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 15698 - 15625
Alignment:
Q  85 tcggcagttaactgccgatgaattagaaattcggctgcagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||||||| ||| |  |||| ||  |||| ||||||||||| | |||||||||| |||||||||||||    
T  15698 tcggcagttaactgtcgaagttttagtaaaccggcggcagttaactgccgaggaaaaccttggtagttaactgc 15625  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 84608 - 84656
Alignment:
Q  116 cggctgcagttaactgtctaggaaaacctcggtagttaactgcggagga 164  Q
    |||| |||||||| || | |||||||||||||||||||||||| |||||    
T  84608 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 84656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 235933 - 235969
Alignment:
Q  122 cagttaactgtctaggaaaacctcggtagttaactgc 158  Q
    |||||||||| | ||||||||||||||||||||||||    
T  235933 cagttaactgccgaggaaaacctcggtagttaactgc 235969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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