View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5416-Insertion-4 (Length: 352)
Name: NF5416-Insertion-4
Description: NF5416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5416-Insertion-4 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 34 - 352
Target Start/End: Complemental strand, 10155017 - 10154698
Alignment:
| Q |
34 |
gaatagtc-gaatatcacactcattcactcaaacacgttagaatgagatgatttaagtctctttcaggttaatcagatatctcaaatttgaatttagact |
132 |
Q |
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| T |
10155017 |
gaatagtcagaatatcacactcattcactcaaacacgttagaatgagatgatttaagtctctttcaagttaatcagatatctcaaatttgaatttagact |
10154918 |
T |
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| Q |
133 |
aacagtgttttttacacaaaacattgttgcaaatatgatctcatacaattcagaagattaatttacgcaattgcacataaaagataccaaatttataaaa |
232 |
Q |
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| T |
10154917 |
aacagtgctttttacgcaaaacattgttggaaatatgatctcatacaactcagaagattaatttacgcaattgcacataaaagataccaaatttataaaa |
10154818 |
T |
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| Q |
233 |
tnnnnnnngttacattcatttcaacctttaataaccccaacaaagctacaaattactctctaatctatactatgttattcacaaaattcccatttgtctt |
332 |
Q |
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| T |
10154817 |
taaaaaaagttacattcatttcaacctttaataagctcaacaaagctacaaattactctctaatctatactatgttattcacaaaattcccatttgtctt |
10154718 |
T |
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| Q |
333 |
aactgcataacaagttttgt |
352 |
Q |
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| T |
10154717 |
aactgcataacaagttttgt |
10154698 |
T |
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