View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5416_high_5 (Length: 228)

Name: NF5416_high_5
Description: NF5416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5416_high_5
NF5416_high_5
[»] chr2 (3 HSPs)
chr2 (1-228)||(32135331-32135558)
chr2 (51-187)||(15498280-15498417)
chr2 (1-104)||(22025471-22025574)
[»] chr6 (5 HSPs)
chr6 (1-189)||(18740012-18740200)
chr6 (1-223)||(18741249-18741471)
chr6 (38-194)||(22459523-22459680)
chr6 (52-127)||(16222120-16222195)
chr6 (58-135)||(22835564-22835641)
[»] scaffold0996 (1 HSPs)
scaffold0996 (10-194)||(3375-3559)
[»] chr5 (5 HSPs)
chr5 (32-223)||(22127812-22128003)
chr5 (1-104)||(20850617-20850720)
chr5 (54-135)||(17293675-17293756)
chr5 (58-135)||(26693746-26693823)
chr5 (58-135)||(26963478-26963555)
[»] scaffold0597 (1 HSPs)
scaffold0597 (32-206)||(7143-7317)
[»] chr1 (3 HSPs)
chr1 (32-189)||(21345793-21345950)
chr1 (32-194)||(39198876-39199031)
chr1 (32-145)||(47399532-47399637)
[»] scaffold0221 (1 HSPs)
scaffold0221 (56-189)||(14507-14640)
[»] chr3 (1 HSPs)
chr3 (52-135)||(21629941-21630024)
[»] chr7 (3 HSPs)
chr7 (29-102)||(22980913-22980986)
chr7 (43-96)||(34358175-34358228)
chr7 (157-193)||(22981035-22981071)
[»] chr8 (1 HSPs)
chr8 (53-134)||(13401033-13401114)


Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 32135331 - 32135558
Alignment:
Q  1 ataaataccaaagaaggagtatttaaatgacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32135331 ataaataccaaagaaggagtatttaaatgacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 32135430  T
Q  101 ttgagagtttgggagaggaccctgtgaccgggttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacgaaggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  32135431 ttgagagtttgggagaggaccctgtgaccgggttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacgggggag 32135530  T
Q  201 aaaggaacctcagtttcagcagctttct 228  Q
    ||||||||||||||||||||||||||||    
T  32135531 aaaggaacctcagtttcagcagctttct 32135558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 15498417 - 15498280
Alignment:
Q  51 ccgggaatcattgttaccgatccccctaatgttccaaaaaa-taatcttcattgagagtttgggagaggaccctgtgaccgggttttggtttgaaaatct 149  Q
    ||||||||||||| |||  ||||||| |||||||||||||| ||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  15498417 ccgggaatcattgctacaaatcccccaaatgttccaaaaaaataatcttcatttagaggttggaagaggaccctgtgaacgggttttggtttgaaaatct 15498318  T
Q  150 accttctgcttattcaattttttcttttgagatttgga 187  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  15498317 accttctgcttattcaattttttcttatgagacttgga 15498280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22025471 - 22025574
Alignment:
Q  1 ataaataccaaagaaggagtatttaaatgacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 100  Q
    |||||||| |||||||||||||||||||||||||  |||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22025471 ataaatactaaagaaggagtatttaaatgacacaagtctgaaaatgctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 22025570  T
Q  101 ttga 104  Q
    ||||    
T  22025571 ttga 22025574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 18740012 - 18740200
Alignment:
Q  1 ataaataccaaagaaggagtatttaaatgacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 100  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18740012 ataaatactaaagatggagtatttaaatgacacatatctctaaattctatccgggaatcattgttaacgatccccctaatgttccaaaaaataatcttca 18740111  T
Q  101 ttgagagtttgggagaggaccctgtgaccgggttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaa 189  Q
    || |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18740112 tttagaggttggaagaggaccctgtgaacgggttttggtttgaaaatctaccttctgcttattcaattttttcttttgagacttggaaa 18740200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18741249 - 18741471
Alignment:
Q  1 ataaataccaaagaaggagtatttaaatgacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 100  Q
    |||||||| ||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18741249 ataaatactaaagatggagtatttaaatgacacatatctctaaatgctattcgggaatcattgttaccgatcctcctaatgttccaaaaaataatcttca 18741348  T
Q  101 ttgagagtttgggagaggaccctgtgaccgggttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacgaaggag 200  Q
    || |||| |||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||| ||||   ||     
T  18741349 tttagaggttggaagaggaccctgtgaacgggttttggtttgaaagtctaccttctgcttatccaattttttcttttaagacttggaaagcacgggagaa 18741448  T
Q  201 aaaggaacctcagtttcagcagc 223  Q
    |||||||| |||||| |||||||    
T  18741449 aaaggaacgtcagttgcagcagc 18741471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 22459680 - 22459523
Alignment:
Q  38 ctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaa-taatcttcattgagagtttgggagaggaccctgtgaccgggtttt 136  Q
    |||| ||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||  |||| |||||||||| ||| ||||||||    
T  22459680 ctctaaaaactaaccgggaatcattgttaccgatcccccaaatgttccaaaaaaataatcttcatttagatgttggaagaggaccctatgaacgggtttt 22459581  T
Q  137 ggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacg 194  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||    
T  22459580 ggtttgaaaatctaccttctccttattcaatgttttcttttgagacttggaaagcacg 22459523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 16222195 - 16222120
Alignment:
Q  52 cgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtga 127  Q
    ||||||||| |||||| ||| |||| |||||||||| | || || |||||||||| ||||||||||||||||||||    
T  16222195 cgggaatcaatgttacggataccccgaatgttccaatagatgatattcattgagaatttgggagaggaccctgtga 16222120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 22835564 - 22835641
Alignment:
Q  58 tcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgggttt 135  Q
    ||||||||||| || |||| ||||||||| |||| || |||||||||||  | ||||| ||||||||||| |||||||    
T  22835564 tcattgttaccaataccccgaatgttccagaaaagaaccttcattgagatgtcgggaggggaccctgtgaacgggttt 22835641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 3559 - 3375
Alignment:
Q  10 aaagaaggagtatttaaatgacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtt 109  Q
    |||||||||||||||||||||||||  |||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  3559 aaagaaggagtatttaaatgacacaagtctgaaaatgctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagatgg 3460  T
Q  110 tgggagaggaccctgtgaccgggttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacg 194  Q
    ||| |||||||||||||| |||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||    
T  3459 tggaagaggaccctgtgagcgggttttagtttgaaaatttaccgtttgcttattcaattttttcttttgagatttggagatcacg 3375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 22128003 - 22127812
Alignment:
Q  32 acatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgg 131  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||  |||||||||||||| |||    
T  22128003 acatatctctaaatgctatccgggaatcaatgttaccgatccccctaatgttcaaaaaaataatcttcatttagaggttgaaagaggaccctgtgaacgg 22127904  T
Q  132 gttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacgaaggagaaaggaacctcagtttcagcagc 223  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  ||| ||||| || || ||| |||||||    
T  22127903 gtcttggtttgaaaatctaccttctgcttattcaattttttcttttgagacttggaaagcacgggggaaaaaggcacttctgttgcagcagc 22127812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20850720 - 20850617
Alignment:
Q  1 ataaataccaaagaaggagtatttaaatgacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 100  Q
    |||||||| |||||||||||||||||||||||||  |||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20850720 ataaatactaaagaaggagtatttaaatgacacaagtctgaaaatgctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttca 20850621  T
Q  101 ttga 104  Q
    ||||    
T  20850620 ttga 20850617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 17293756 - 17293675
Alignment:
Q  54 ggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgggttt 135  Q
    ||||||||||||||||||||||| |||||||||| | ||||  ||||||||||  ||||||||| ||||||||| |||||||    
T  17293756 ggaatcattgttaccgatcccccgaatgttccaatagataaaattcattgagaagttgggagagcaccctgtgatcgggttt 17293675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 26693823 - 26693746
Alignment:
Q  58 tcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgggttt 135  Q
    ||||||||||| || |||| ||||||||| |||| || |||||||||||  | ||||| ||||||||||| |||||||    
T  26693823 tcattgttaccaataccccgaatgttccagaaaagaaccttcattgagatgtcgggaggggaccctgtgaacgggttt 26693746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 26963555 - 26963478
Alignment:
Q  58 tcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgggttt 135  Q
    ||||||||||| || |||| ||||||||| |||| || |||||||||||  | ||||| ||||||||||| |||||||    
T  26963555 tcattgttaccaataccccgaatgttccagaaaagaaccttcattgagatgtcgggaggggaccctgtgaacgggttt 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 32 - 206
Target Start/End: Original strand, 7143 - 7317
Alignment:
Q  32 acatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgg 131  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||| |||||||| |||||  ||    
T  7143 acatatctctaaatgctatccgggaatcattgttgccgatcccactaatgttccaaaaaataatcttcattaagaggttggcagaggaccgtgtgaatgg 7242  T
Q  132 gttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacgaaggagaaagga 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||| ||||||    
T  7243 gttttggtttgaaaatctaccttctgcttattcaattttttcttttgagacttgtaaagcacggaggaaaaagga 7317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 1e-55; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 32 - 189
Target Start/End: Original strand, 21345793 - 21345950
Alignment:
Q  32 acatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgg 131  Q
    |||||||||| || ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||| |||  |||||||||||||| |||    
T  21345793 acatatctctaaatgctatccgggaatcaatgttaccgatcctcctaatgttcaaaaaaataatcttcatttagaggttgaaagaggaccctgtgaacgg 21345892  T
Q  132 gttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaa 189  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21345893 gtcttggtttgaaaatctaccttctgcttattcaattttttcttttgagacttggaaa 21345950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 39199031 - 39198876
Alignment:
Q  32 acatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgg 131  Q
    |||||||||| ||| |||  ||||||||||||||||||||||||| |||||| |||       |||||||| |||| |||| |||||||||||||| |||    
T  39199031 acatatctctaaaaactaaacgggaatcattgttaccgatcccccaaatgtttcaa-------tcttcatttagaggttggaagaggaccctgtgaacgg 39198939  T
Q  132 gttttggtttgaaaatctaccttctgcttattcaattttttcttttgagatttggaaatcacg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  39198938 gttttggtttgaaaatctaccttctgcttattcaattttttcttttgagacttggaaagcacg 39198876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 47399532 - 47399637
Alignment:
Q  32 acatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgg 131  Q
    |||||||||| ||| |||  ||||||||||| ||||||||||||| |||||| |||       |||||||| |||| |||| |||||||||||||| |||    
T  47399532 acatatctctaaaaactaaacgggaatcatt-ttaccgatcccccaaatgtttcaa-------tcttcatttagaggttggaagaggaccctgtgaacgg 47399623  T
Q  132 gttttggtttgaaa 145  Q
    ||||||||||||||    
T  47399624 gttttggtttgaaa 47399637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 14507 - 14640
Alignment:
Q  56 aatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgggttttggtttgaaaatctaccttc 155  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||| |||||||||||||    
T  14507 aatcattgttaccgatcctcctaatgttccaaaaaataatcttcatttagaggttggaagaggaccctgtgaacgggttttggtttaaaaatctaccttc 14606  T
Q  156 tgcttattcaattttttcttttgagatttggaaa 189  Q
    | |||||||||||| ||||||||||| |||||||    
T  14607 tacttattcaatttattcttttgagacttggaaa 14640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 21630024 - 21629941
Alignment:
Q  52 cgggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgggttt 135  Q
    ||||||||||||||||||||||||| |||||||||| | || |  ||||||||||  ||||||||||||||||||| |||||||    
T  21630024 cgggaatcattgttaccgatcccccgaatgttccaatagatgaaattcattgagaagttgggagaggaccctgtgatcgggttt 21629941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 22980913 - 22980986
Alignment:
Q  29 gacacatatctctgaaagctatccgggaatcattgttaccgatccccctaatgttccaaaa-aataatcttcatt 102  Q
    ||||||||||||  ||||||||  ||||||||||||||| ||| |||| |||||||||||| |||||||||||||    
T  22980913 gacacatatctcgaaaagctatttgggaatcattgttactgat-ccccgaatgttccaaaacaataatcttcatt 22980986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 34358175 - 34358228
Alignment:
Q  43 aaagctatccgggaatcattgttaccgatccccctaatgttccaaaaaataatc 96  Q
    |||||||| ||||||||||||||||||||||  | | ||||||| |||||||||    
T  34358175 aaagctattcgggaatcattgttaccgatccttcgagtgttccagaaaataatc 34358228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 22981035 - 22981071
Alignment:
Q  157 gcttattcaattttttcttttgagatttggaaatcac 193  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  22981035 gcttattcaattttttcttctgagacttggaaatcac 22981071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 13401114 - 13401033
Alignment:
Q  53 gggaatcattgttaccgatccccctaatgttccaaaaaataatcttcattgagagtttgggagaggaccctgtgaccgggtt 134  Q
    |||||||||| ||||| ||||| | | |||||||| |||||||  |||||||||   |||||||||||||||||| ||||||    
T  13401114 gggaatcattattacctatcccacaagtgttccaataaataataatcattgagaagatgggagaggaccctgtgaacgggtt 13401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University