View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5417_low_17 (Length: 251)
Name: NF5417_low_17
Description: NF5417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5417_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 25135745 - 25135987
Alignment:
| Q |
1 |
ttgcattgcagcaaaatctaagggggaaaaatgggtgggtgtatttcaaattggaatgacctaccatgagatgaaatgtgatcggtgtatgaattcgtct |
100 |
Q |
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| T |
25135745 |
ttgcattgcaacaaaatctaagggggaaaaatgggtgggtgtaattcaaattggaatgacctaccatgagatgaaatgtaatcggtgtatgaattcgtct |
25135844 |
T |
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| Q |
101 |
gaatgaatgaatattacagtaactgtgaatgttttccatgaacttgcttttaaatttctactaggaaattagaaatgccaaaaggatcggtgtaaatatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25135845 |
gaatgaatgaatattacagtaactgtgaatgttttccatgaacttgcttttaaatttctactaggaaattagaaatgccaaaaggatcggtgtaaatatt |
25135944 |
T |
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| Q |
201 |
gtgataggatgatcaaatagagcaaataataaacccctttgct |
243 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
25135945 |
gtgataggatgatcaaatacagcaaataataaacccctttgct |
25135987 |
T |
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