View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5418-Insertion-16 (Length: 391)
Name: NF5418-Insertion-16
Description: NF5418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5418-Insertion-16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 8 - 391
Target Start/End: Original strand, 38787001 - 38787384
Alignment:
| Q |
8 |
ggtgtgctaccgtaactttagctaatatacactttgaaggttcagcaaaaccacaatgccttcagtttaccaactcactgtcatgatatatcaggacata |
107 |
Q |
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| T |
38787001 |
ggtgtgctaccgtaactttagctaatatacactttgaaggttcagcaaaaccacaatgccttcagtttaccaactcactgtcatgatatatcaggacata |
38787100 |
T |
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| Q |
108 |
gcgaaaatcacctaaaggttgaaacataatactcatcaattacgtcatccaaatgaactagcaaggttaaaaattcagactgaaaacaaaaccctcagaa |
207 |
Q |
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| T |
38787101 |
gcgaaaatcacctaaaggttgaaacataatactcatcaataacgccatccaaatgaactagcaaggttaaaaattcagactgaaaacaaaaccctcagaa |
38787200 |
T |
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| Q |
208 |
gaaaaatgaaaaggacacccacatattcaagtcaacaagttaagtccacatgaagaatgaccttggaaagaattaaaatttaggaaaaatagaaattgat |
307 |
Q |
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| T |
38787201 |
gaaaaatgaaaaggacacccacatattcaagtcaacaagttaagtccacatgaagaatgaacttggaaagaattaaaatttaggaaaaatagaaattgat |
38787300 |
T |
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| Q |
308 |
tgatccattcggattcagacatgcaagaaaccttcataagtcatgcattcttagctttttactttgccttcatttcttccaact |
391 |
Q |
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| T |
38787301 |
tgatccattcggattcagacatgcaagaaaccttcataagtcatgcattcttagctttttactttgccttcatttcttccaact |
38787384 |
T |
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