View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5418-Insertion-5 (Length: 1092)

Name: NF5418-Insertion-5
Description: NF5418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5418-Insertion-5
NF5418-Insertion-5
[»] chr1 (39 HSPs)
chr1 (40-585)||(10011479-10012023)
chr1 (587-781)||(28234800-28235004)
chr1 (587-754)||(37034812-37034980)
chr1 (587-781)||(42866279-42866483)
chr1 (586-769)||(7156142-7156334)
chr1 (587-688)||(33690160-33690261)
chr1 (587-781)||(44257771-44257975)
chr1 (587-692)||(44410713-44410818)
chr1 (608-781)||(24984066-24984249)
chr1 (587-781)||(3355401-3355605)
chr1 (587-688)||(32364122-32364223)
chr1 (587-681)||(45193207-45193301)
chr1 (587-686)||(24638703-24638799)
chr1 (587-781)||(46535172-46535368)
chr1 (587-686)||(3252227-3252326)
chr1 (690-781)||(48303101-48303192)
chr1 (690-759)||(4225000-4225069)
chr1 (640-754)||(5384699-5384823)
chr1 (587-686)||(962498-962597)
chr1 (587-686)||(3014175-3014273)
chr1 (587-654)||(9293643-9293710)
chr1 (587-682)||(28281977-28282072)
chr1 (691-781)||(1846812-1846902)
chr1 (587-751)||(12792671-12792837)
chr1 (587-688)||(20725984-20726085)
chr1 (615-688)||(27415231-27415304)
chr1 (587-687)||(18032288-18032388)
chr1 (690-754)||(50655560-50655624)
chr1 (690-781)||(9293736-9293827)
chr1 (642-692)||(10698634-10698684)
chr1 (603-681)||(20117852-20117930)
chr1 (707-769)||(34143554-34143616)
chr1 (587-654)||(1846930-1846997)
chr1 (587-678)||(31986096-31986187)
chr1 (662-713)||(37701514-37701565)
chr1 (587-638)||(45484177-45484228)
chr1 (587-682)||(50323331-50323426)
chr1 (646-692)||(37669968-37670014)
chr1 (587-680)||(49241643-49241736)
[»] chr4 (32 HSPs)
chr4 (587-769)||(28359585-28359777)
chr4 (587-754)||(25232596-25232773)
chr4 (587-754)||(1936432-1936609)
chr4 (587-754)||(11792385-11792562)
chr4 (587-754)||(12704581-12704758)
chr4 (587-688)||(4414416-4414517)
chr4 (587-692)||(44352088-44352193)
chr4 (587-755)||(55675421-55675599)
chr4 (587-692)||(54822048-54822153)
chr4 (587-781)||(23611435-23611639)
chr4 (587-680)||(24776175-24776268)
chr4 (974-1029)||(28358523-28358579)
chr4 (587-686)||(8132792-8132891)
chr4 (591-654)||(24394078-24394141)
chr4 (587-680)||(29695441-29695534)
chr4 (587-686)||(19916434-19916533)
chr4 (587-669)||(8261055-8261137)
chr4 (587-669)||(8274472-8274554)
chr4 (587-686)||(6354973-6355072)
chr4 (690-781)||(7648136-7648227)
chr4 (620-679)||(8132334-8132393)
chr4 (587-698)||(32988230-32988341)
chr4 (690-781)||(55497567-55497658)
chr4 (587-681)||(2859420-2859514)
chr4 (587-688)||(26203678-26203779)
chr4 (631-681)||(34856052-34856102)
chr4 (587-688)||(293551-293652)
chr4 (587-679)||(43245726-43245818)
chr4 (587-686)||(7362122-7362220)
chr4 (587-678)||(25510488-25510579)
chr4 (614-669)||(41848981-41849036)
chr4 (587-681)||(38519288-38519382)
[»] chr2 (32 HSPs)
chr2 (587-781)||(3988706-3988897)
chr2 (587-754)||(35305221-35305398)
chr2 (587-751)||(24128754-24128928)
chr2 (587-781)||(17513021-17513225)
chr2 (587-679)||(19881940-19882032)
chr2 (587-751)||(23293114-23293288)
chr2 (587-692)||(6065508-6065613)
chr2 (575-761)||(16106633-16106829)
chr2 (587-688)||(21800684-21800785)
chr2 (587-781)||(29523789-29523985)
chr2 (587-781)||(7153438-7153641)
chr2 (587-692)||(10810555-10810660)
chr2 (587-688)||(32878715-32878816)
chr2 (587-715)||(22315165-22315293)
chr2 (886-933)||(3989003-3989050)
chr2 (587-714)||(37254809-37254936)
chr2 (587-688)||(23250970-23251071)
chr2 (587-781)||(37314840-37315036)
chr2 (587-781)||(39678305-39678509)
chr2 (587-781)||(39061827-39062023)
chr2 (632-715)||(698592-698675)
chr2 (690-751)||(14885405-14885466)
chr2 (587-688)||(37255986-37256087)
chr2 (587-654)||(18540659-18540726)
chr2 (587-688)||(16457749-16457850)
chr2 (587-692)||(27905623-27905728)
chr2 (587-692)||(41746866-41746971)
chr2 (587-692)||(13814897-13815006)
chr2 (998-1029)||(3989374-3989405)
chr2 (587-751)||(31900414-31900580)
chr2 (587-660)||(12340397-12340470)
chr2 (694-763)||(39761775-39761844)
[»] scaffold0242 (1 HSPs)
scaffold0242 (587-754)||(17777-17954)
[»] chr5 (26 HSPs)
chr5 (587-769)||(35758036-35758218)
chr5 (587-751)||(8761022-8761196)
chr5 (587-688)||(18942250-18942351)
chr5 (587-781)||(36745765-36745969)
chr5 (587-679)||(29823258-29823350)
chr5 (587-751)||(27194700-27194874)
chr5 (587-688)||(6459708-6459809)
chr5 (587-781)||(40143905-40144109)
chr5 (603-751)||(14635362-14635520)
chr5 (587-688)||(38040624-38040725)
chr5 (587-687)||(32383890-32383990)
chr5 (603-751)||(3752471-3752629)
chr5 (587-688)||(17644207-17644308)
chr5 (588-686)||(13956932-13957030)
chr5 (587-688)||(35456508-35456609)
chr5 (587-647)||(389696-389756)
chr5 (587-654)||(6273129-6273196)
chr5 (690-753)||(29293420-29293483)
chr5 (587-681)||(814781-814875)
chr5 (587-688)||(14351939-14352040)
chr5 (626-686)||(23015073-23015133)
chr5 (694-754)||(39051860-39051920)
chr5 (663-715)||(28887398-28887450)
chr5 (641-681)||(33224950-33224990)
chr5 (547-585)||(16352147-16352185)
chr5 (690-751)||(26166138-26166199)
[»] chr8 (27 HSPs)
chr8 (587-781)||(19726611-19726815)
chr8 (587-781)||(40485451-40485655)
chr8 (587-781)||(42063463-42063667)
chr8 (587-781)||(41726256-41726460)
chr8 (587-754)||(44056427-44056604)
chr8 (587-686)||(36833905-36834004)
chr8 (587-751)||(31008463-31008637)
chr8 (587-686)||(32493188-32493287)
chr8 (587-688)||(8014922-8015023)
chr8 (587-781)||(30360456-30360660)
chr8 (587-781)||(13487048-13487251)
chr8 (587-754)||(18656557-18656726)
chr8 (582-781)||(14910091-14910300)
chr8 (587-781)||(3655858-3656062)
chr8 (603-688)||(28761682-28761767)
chr8 (587-754)||(39375123-39375292)
chr8 (640-781)||(5969901-5970052)
chr8 (587-781)||(36658516-36658712)
chr8 (587-682)||(11031031-11031126)
chr8 (587-638)||(4455398-4455449)
chr8 (587-682)||(36823449-36823544)
chr8 (587-681)||(12639366-12639460)
chr8 (690-764)||(39024507-39024580)
chr8 (606-688)||(45219529-45219611)
chr8 (690-751)||(27679192-27679253)
chr8 (615-679)||(6545712-6545776)
chr8 (587-682)||(24279610-24279705)
[»] chr7 (30 HSPs)
chr7 (587-781)||(36099586-36099790)
chr7 (588-756)||(33628182-33628360)
chr7 (586-754)||(10198307-10198485)
chr7 (587-781)||(29983236-29983440)
chr7 (587-751)||(11734170-11734344)
chr7 (587-754)||(16216930-16217107)
chr7 (587-781)||(36858134-36858338)
chr7 (587-754)||(24096645-24096822)
chr7 (587-751)||(44605860-44606034)
chr7 (587-688)||(45269451-45269552)
chr7 (587-676)||(14801973-14802062)
chr7 (587-676)||(15248965-15249054)
chr7 (587-681)||(34191911-34192005)
chr7 (587-688)||(1582156-1582257)
chr7 (587-688)||(31813489-31813590)
chr7 (690-763)||(20131269-20131342)
chr7 (588-676)||(5418899-5418987)
chr7 (587-679)||(9822520-9822612)
chr7 (587-679)||(10724445-10724537)
chr7 (587-686)||(46170642-46170741)
chr7 (587-751)||(47423454-47423620)
chr7 (587-688)||(10992717-10992818)
chr7 (587-680)||(16198718-16198810)
chr7 (587-688)||(34259275-34259376)
chr7 (587-682)||(16560920-16561015)
chr7 (587-682)||(16604647-16604742)
chr7 (587-692)||(33610591-33610696)
chr7 (630-698)||(49095810-49095878)
chr7 (624-682)||(8419974-8420032)
chr7 (587-688)||(31958635-31958736)
[»] chr3 (36 HSPs)
chr3 (587-754)||(27002523-27002691)
chr3 (587-751)||(39850696-39850870)
chr3 (587-781)||(30464984-30465188)
chr3 (587-751)||(29025260-29025434)
chr3 (587-762)||(51537106-51537291)
chr3 (587-781)||(23241760-23241964)
chr3 (587-751)||(55258025-55258186)
chr3 (587-686)||(35054712-35054811)
chr3 (587-686)||(53351172-53351271)
chr3 (587-769)||(45096289-45096482)
chr3 (587-781)||(33634884-33635088)
chr3 (587-686)||(42907770-42907869)
chr3 (587-688)||(37599874-37599975)
chr3 (587-742)||(44201110-44201265)
chr3 (587-781)||(2849163-2849366)
chr3 (587-688)||(41462355-41462456)
chr3 (586-654)||(11412527-11412595)
chr3 (587-654)||(10259229-10259296)
chr3 (587-762)||(29727738-29727923)
chr3 (588-755)||(5123764-5123933)
chr3 (587-688)||(42217162-42217263)
chr3 (587-654)||(11676266-11676332)
chr3 (587-688)||(11574995-11575096)
chr3 (690-751)||(26725658-26725719)
chr3 (690-754)||(52404275-52404339)
chr3 (690-781)||(10259112-10259203)
chr3 (587-681)||(45104119-45104213)
chr3 (694-751)||(44832521-44832578)
chr3 (587-679)||(11018706-11018797)
chr3 (624-715)||(6101894-6101985)
chr3 (690-781)||(11676158-11676249)
chr3 (687-754)||(45158571-45158638)
chr3 (587-688)||(15100605-15100706)
chr3 (587-688)||(21603597-21603698)
chr3 (591-692)||(31488903-31489004)
chr3 (587-688)||(33987220-33987321)
[»] chr6 (13 HSPs)
chr6 (587-781)||(24068095-24068299)
chr6 (587-688)||(23595692-23595793)
chr6 (587-754)||(30269594-30269771)
chr6 (587-781)||(21289552-21289755)
chr6 (588-681)||(31513381-31513474)
chr6 (587-769)||(8464282-8464473)
chr6 (587-679)||(6817291-6817383)
chr6 (624-715)||(11465359-11465450)
chr6 (587-636)||(29419813-29419862)
chr6 (587-692)||(30426319-30426424)
chr6 (587-636)||(34779975-34780024)
chr6 (691-751)||(13630310-13630370)
chr6 (587-781)||(22351150-22351346)
[»] scaffold0231 (1 HSPs)
scaffold0231 (587-751)||(10961-11135)
[»] scaffold0070 (1 HSPs)
scaffold0070 (587-751)||(12722-12896)
[»] scaffold0043 (1 HSPs)
scaffold0043 (587-688)||(64346-64447)
[»] scaffold0116 (1 HSPs)
scaffold0116 (587-712)||(7840-7965)
[»] scaffold0036 (1 HSPs)
scaffold0036 (587-781)||(51910-52114)
[»] scaffold0712 (1 HSPs)
scaffold0712 (587-654)||(4963-5029)
[»] scaffold0709 (1 HSPs)
scaffold0709 (587-654)||(4983-5049)


Alignment Details
Target: chr1 (Bit Score: 469; Significance: 0; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 40 - 585
Target Start/End: Original strand, 10011479 - 10012023
Alignment:
Q  40 gttgatgaaagattctggcggagaacatgcagctatgcagatggcattgaagagttggatagatactgtgttgttgaaccaagggaagagagcactgtga 139  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  10011479 gttgatgaaagattctggcggagaacatgcagctatggagatggcattgaagagttggatggatactgtgctgttgaaccaagggaagagagcactgtga 10011578  T
Q  140 ttcctaaagttagcatgggaagaagagctagaatnnnnnnngttatgatagatgctggtttagtgtgtgaacatgcgtgggaaatagatcaactgcatgt 239  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10011579 ttcctaaagttagcatgggaagaagagctagaataaaaaaagttatgatagatgctggtttagtgtgtgaacatgcgtgggaaatagatcagctgcatgt 10011678  T
Q  240 tttccatatagtacaccaaggtacattattaattgtggtaagaaagcaatgtctgaaggtctatatgtgagccatggagaatataaatggtttttggatg 339  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10011679 tttccatatagtacaccaaggta-attattaattgtggtaagaaagcaacgtctgaaggtctatatgtgagccatggagaatataaatggtttttggatg 10011777  T
Q  340 tattgagtgtttactgactcatgagtagtaacatccatatataggcatagagtgcaagcaaatagtgtatctaggtgcatggaaaatataccgaaataaa 439  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10011778 tattgattgtttactgactcatggttagtaacatccatatataggcatagagtgcaggcaaatagtgtatctaggtgcatggaaaatataccgaaataaa 10011877  T
Q  440 ttatgagtgcgaaggcttagagttttgtcattccaagacacttcattcaattaattaaggagggaagagctgatttcgaaatttaaattatttggagcca 539  Q
    || |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10011878 ttctgagtgggaaggcttagagttttgtcattccaagatacttcattcaattaattaaggagggaagagctgatttcgaaatttaaattatttggagcca 10011977  T
Q  540 ttttgttggattagggttttggaattagggtaagcatgtttgctag 585  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10011978 ttttgttggattagggttttggaattagggtaagcatgtttgctag 10012023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 28234800 - 28235004
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  28234800 atagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 28234899  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  28234900 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 28234999  T
Q  777 acttt 781  Q
    |||||    
T  28235000 acttt 28235004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 37034980 - 37034812
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||| ||||||||||||||| | ||| |||||||| ||||||||||| ||||    
T  37034980 atagttttaaaactcggctcgatcatcgactcggcatgggtactgggttactgggtcaatggtcgaaccactgggtcattggtcgaaccgcatgactgaa 37034881  T
Q  687 tcagat-gactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
     | |||  ||||||||| ||||||||||||  ||||| || |||||||| ||||||| || ||||||||    
T  37034880 ccggatcaactcggttagataactcggtcttgagattaaacttatatagctatttaatcgaattaaatc 37034812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 42866279 - 42866483
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  42866279 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 42866378  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  42866379 ccggaatcactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaattcggattgaatcggtgactcggtc 42866478  T
Q  777 acttt 781  Q
    |||||    
T  42866479 acttt 42866483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 586 - 769
Target Start/End: Complemental strand, 7156334 - 7156142
Alignment:
Q  586 aatagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattga 685  Q
    ||||||||||||| || |||||  ||||||||||| |||||| |||||||  | ||||||||||||||| |||||||||| ||||||||||||||| |||    
T  7156334 aatagttttaaaattcggctcgtccattgactcgggaggggtgctgggtcgat-ggtcaatggtcgaaccattggatcatcggttgaaccgcatgactga 7156236  T
Q  686 atcag----------atgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtga 769  Q
    | |||          |||| ||||| | ||||||||||||  ||||| ||||||||||||||||||| |||||||||||  |||||||| ||||    
T  7156235 accagatcaacttgaatgattcggtaagataactcggtcttgagattaaatttatatagatatttaagcggattaaatctgattgaattggtga 7156142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 33690160 - 33690261
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| | ||| ||||||||||| | ||  || ||||||||||||||||||||||    
T  33690160 atagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgattgaa 33690259  T
Q  687 tc 688  Q
    ||    
T  33690260 tc 33690261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 44257771 - 44257975
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| |  |||||||||||||| |  |  |||||||| ||||||||||| ||||    
T  44257771 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactgaa 44257870  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||| |||||||| ||  |||||||  |||| | ||||    
T  44257871 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcggattgaatcggtgactcggtc 44257970  T
Q  777 acttt 781  Q
    |||||    
T  44257971 acttt 44257975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 44410713 - 44410818
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| | |||||||| ||||||||| ||||||||||||||| ||| ||||||||||| | ||  ||| |||||||||||||||| | ||    
T  44410713 atagttttaaaactcggttcggtcatcgactcggcaagggtactgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactaaa 44410812  T
Q  687 tcagat 692  Q
    ||||||    
T  44410813 tcagat 44410818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 608 - 781
Target Start/End: Complemental strand, 24984249 - 24984066
Alignment:
Q  608 gtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa----------tcagatgactc 697  Q
    ||||| |||||||| |||||||||||||| | ||||||||||||||||| ||  |||||||| ||||||||||| ||||          || ||||||||    
T  24984249 gtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaactagtgagtcattggtcgaaccgcatgactgaaccggaaccactcggatgactc 24984150  T
Q  698 ggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||| |||||||||||   ||||| ||||||||||| ||| |||||||||||| ||  |||||||  |||| | |||||||||    
T  24984149 ggttagataactcggtccttagattaaatttatatagttatataaccggattaactcggattgaatcggtgactcggtcacttt 24984066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 3355401 - 3355605
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||||| ||| |||||||||| | ||||||||||||||  | ||  |||||||| ||||||||||| ||||    
T  3355401 atagttttaaaattcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaatcactgagtcattggtcgaaccgcatgactgaa 3355500  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||| ||||||   ||||| ||||||||||| ||| |||||||||||| ||  |||||||  |||| | ||||    
T  3355501 ccggaaccactcggatgactcggttagataattcggtccttagattaaatttatatagttatataaccggattaactcggattgaatcggtgactcggtc 3355600  T
Q  777 acttt 781  Q
    |||||    
T  3355601 acttt 3355605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 32364122 - 32364223
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||| |||||||| |||||| || ||| ||||||||||| | ||| ||| |||||||||||||||| ||||    
T  32364122 atagttttaaaattcggctcggtcatcgactcgacaggggtattgggtcgctgggttaatggtcgaaccactgggtcactggttgaaccgcatgactgaa 32364221  T
Q  687 tc 688  Q
    ||    
T  32364222 tc 32364223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 587 - 681
Target Start/End: Complemental strand, 45193301 - 45193207
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    ||||||||||||||| ||||| |||| ||||||||| |||| |||||||||| ||||| ||||||||| | || |||||| || |||||||||||    
T  45193301 atagttttaaaactcggctcgatcatcgactcggcaagggtgctgggtcactgggtcattggtcgaaccactgaatcattagtcgaaccgcatga 45193207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 24638703 - 24638799
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||| |  || |||||||||||   ||| ||| |||||||||||||||| ||||    
T  24638703 atagttttaaaactcagctcggtcatcgactcggcatgggtagtgggtcagtgagttaatggtcgaac---tgggtcactggttgaaccgcatgactgaa 24638799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 46535368 - 46535172
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||||        |||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  46535368 atagttttaaaactcggctcggtcatcgactcggcgggggtactgg--------gtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 46535277  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||| ||||||||||| ||  |||||||  |||| | ||||    
T  46535276 tcggaaccattcggatgactcggttagataactcggtccttagattaaatttatatagttattaaaccggattaactcggattgaatcggtgactcggtc 46535177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 3252227 - 3252326
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||| || ||||||||||||||  || |||||| |||| | ||  ||| |||||||||||||||| ||||    
T  3252227 atagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcactggttgaaccgcatgactgaa 3252326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 690 - 781
Target Start/End: Complemental strand, 48303192 - 48303101
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| || ||||||||  |||| | |||||||||    
T  48303192 gatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcgaattgaatcggtgactcggtcacttt 48303101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 690 - 759
Target Start/End: Complemental strand, 4225069 - 4225000
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaatt 759  Q
    ||||||||||||| |||||||| |||  ||||| ||||||||||| ||||||||||||||||||| ||||    
T  4225069 gatgactcggttagataactcgttcttgagattaaatttatatagctatttaaccggattaaatcgaatt 4225000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 640 - 754
Target Start/End: Complemental strand, 5384823 - 5384699
Alignment:
Q  640 ggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa----------tcagatgactcggttaaataactcggtctaaagattcaattta 729  Q
    ||||||||||||||||||||| | |||||| ||||||||||| ||||          || |||| ||| |||| ||||||||||||  ||||| ||||||    
T  5384823 ggtcaatggtcgaactattgggttattggtcgaaccgcatgactgaaccggatcaactcggatggctcagttagataactcggtcttgagattaaattta 5384724  T
Q  730 tatagatatttaaccggattaaatc 754  Q
    ||||| |||||||||||||||||||    
T  5384723 tatagctatttaaccggattaaatc 5384699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 686
Target Start/End: Complemental strand, 962597 - 962498
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||||  |||||| ||||| || || ||||||||||| | ||  ||| |||||||||| ||||| ||||    
T  962597 atagttttaaaactcggctcggtcatcgactcggcataggtactaggtcaataagttaatggtcgaaccactgagtcactggttgaaccacatgactgaa 962498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 686
Target Start/End: Complemental strand, 3014273 - 3014175
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  |||| | || ||||||||||||||||||||||||| | | ||||||||||| | ||  |||||||||||||| ||||| ||||    
T  3014273 atagttttaaaactcgtctcgtt-atcgactcggcaggggtactgggtcactggattaatggtcgaaccactgagtcattggttgaaccacatgactgaa 3014175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 654
Target Start/End: Original strand, 9293643 - 9293710
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||| ||||| |||| |||||| | |||||||||||||| | |||||||||||||||    
T  9293643 atagttttaaaactcggctcgatcatcgactcgacgggggtactgggtcaatgggtcaatggtcgaac 9293710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 682
Target Start/End: Original strand, 28281977 - 28282072
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    ||||||||||||||| |  |||||||||||||||   || ||||||||||||  |||| |||| |||| ||||| ||| |||||||||||||||||    
T  28281977 atagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgat 28282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 691 - 781
Target Start/End: Complemental strand, 1846902 - 1846812
Alignment:
Q  691 atgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    |||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | |||||||||    
T  1846902 atgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtcacttt 1846812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 587 - 751
Target Start/End: Original strand, 12792671 - 12792837
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||| || | ||||||||||||||        |||||||||| |  |  |||||||| ||||||||||| ||||    
T  12792671 atagttttaaaactcggctcggtcatcgacccgacgggggtactgggtca--------atggtcgaaccaccgagtcattggtcgaaccgcatgactgaa 12792762  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    |||||          ||||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  12792763 tcagaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 12792837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 20725984 - 20726085
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||| || || |||||||||| |  || ||||||||||| | ||  ||| ||||||||| |||||| ||||    
T  20725984 atagttttaaaactcggctcggtcatcgactcgacatggatactgggtcaatgagttaatggtcgaaccactgactcactggttgaactgcatgactgaa 20726083  T
Q  687 tc 688  Q
    ||    
T  20726084 tc 20726085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 615 - 688
Target Start/End: Complemental strand, 27415304 - 27415231
Alignment:
Q  615 actcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatc 688  Q
    |||||| | ||||||||||||||| | |||||||| |||| | ||||||||||||||||||||| || ||||||    
T  27415304 actcggtaagggtactgggtcactggttcaatggttgaaccactggatcattggttgaaccgcacgactgaatc 27415231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 587 - 687
Target Start/End: Original strand, 18032288 - 18032388
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||| ||| |  || ||||||||||| | ||  ||| ||||||||| |||||| ||||    
T  18032288 atagttttaaaactcggctcggtcgtcgactcggcatgggtactggatcaatgagttaatggtcgaaccactgagtcactggttgaactgcatgactgaa 18032387  T
Q  687 t 687  Q
    |    
T  18032388 t 18032388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 690 - 754
Target Start/End: Original strand, 50655560 - 50655624
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
    ||||||| ||||| |||||||||||   ||||| ||||||||||| |||||||||||||||||||    
T  50655560 gatgacttggttagataactcggtccttagattaaatttatatagttatttaaccggattaaatc 50655624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 690 - 781
Target Start/End: Original strand, 9293736 - 9293827
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||| |||||||| ||  |||||||  |||| | |||||||||    
T  9293736 gatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcggattgaatcggtgactcggtcacttt 9293827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 642 - 692
Target Start/End: Complemental strand, 10698684 - 10698634
Alignment:
Q  642 tcaatggtcgaactattggatcattggttgaaccgcatgattgaatcagat 692  Q
    ||||||||||||| |||||||||||||| |||||||||||  |||||||||    
T  10698684 tcaatggtcgaaccattggatcattggtcgaaccgcatgaaagaatcagat 10698634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 603 - 681
Target Start/End: Complemental strand, 20117930 - 20117852
Alignment:
Q  603 gctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    ||||||||||  |||||| |||| ||||| |||| | ||||||||||||||| ||||  | ||||||||||||||||||    
T  20117930 gctcggtcatcaactcggtagggatactgagtcattgggtcaatggtcgaaccattgagttattggttgaaccgcatga 20117852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 707 - 769
Target Start/End: Original strand, 34143554 - 34143616
Alignment:
Q  707 actcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtga 769  Q
    |||||||||  ||||| ||||||||||||||||||| |||||||||||  |||||||| ||||    
T  34143554 actcggtcttgagattaaatttatatagatatttaagcggattaaatctgattgaattggtga 34143616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 654
Target Start/End: Complemental strand, 1846997 - 1846930
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||| ||||| |||| |||||||| | |||||||||| | | ||| |||||||||||    
T  1846997 atagttttaaaactcggctcgatcatcgactcggcggaggtactgggttaatgggttaatggtcgaac 1846930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 678
Target Start/End: Complemental strand, 31986187 - 31986096
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgca 678  Q
    ||||||||||||||| |  ||||| | ||||||| | |||| |||||||||| | ||| |||| |||| | ||| |||||||||||||||||    
T  31986187 atagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgca 31986096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 662 - 713
Target Start/End: Complemental strand, 37701565 - 37701514
Alignment:
Q  662 tcattggttgaaccgcatgattgaatcagatgactcggttaaataactcggt 713  Q
    |||||||||||||||||||| |||||| |||| |||||||| || |||||||    
T  37701565 tcattggttgaaccgcatgactgaatcggatggctcggttatatgactcggt 37701514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 638
Target Start/End: Original strand, 45484177 - 45484228
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcact 638  Q
    ||||||||||||||  ||| |||||| ||||||||||||||||||| |||||    
T  45484177 atagttttaaaacttggcttggtcatcgactcggcaggggtactggatcact 45484228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 682
Target Start/End: Original strand, 50323331 - 50323426
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    ||||||||||||||| | |||||  | ||||||| | || |||||||||||| ||| | ||||||||| ||| | ||| |||| ||||||||||||    
T  50323331 atagttttaaaactcggttcggttgtcgactcggtaaggatactgggtcactgggttattggtcgaaccattaggtcactggtcgaaccgcatgat 50323426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 646 - 692
Target Start/End: Original strand, 37669968 - 37670014
Alignment:
Q  646 tggtcgaactattggatcattggttgaaccgcatgattgaatcagat 692  Q
    ||||||||||||| | ||||||||||||||||| || ||||||||||    
T  37669968 tggtcgaactattaggtcattggttgaaccgcacgactgaatcagat 37670014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 680
Target Start/End: Original strand, 49241643 - 49241736
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatg 680  Q
    |||||||||||| || |||||||||| || ||| ||||| |||||| ||| | ||| ||||||||||| |  |  || ||||||||||||||||    
T  49241643 atagttttaaaattcggctcggtcatcgattcgacagggatactggatcattgggttaatggtcgaaccaccgagtcgttggttgaaccgcatg 49241736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 7e-55; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 587 - 769
Target Start/End: Complemental strand, 28359777 - 28359585
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||| |||||| |||||||||||| ||||||||||||| ||||    
T  28359777 atagttttaaaactcggctcggtcattgactcggcagaggtattgggtcactgggtcaatgatcgaaccattggatcattgattgaaccgcatgactgaa 28359678  T
Q  687 tca----------gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtga 769  Q
    |||          ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  28359677 tcagatcaactcggatgactcggttaaatatctcggtctaaagatttaatttatataggtatttaaccagattaaatcaaattgaattagtga 28359585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 25232773 - 25232596
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  25232773 atagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 25232674  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || |||| |||||||| ||||||||||||  ||||| ||||||||||||||||||||| |||||||||    
T  25232673 ccggatcaactcggatggctcggttagataactcggtcttgagattaaatttatatagatatttaaccagattaaatc 25232596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 1936609 - 1936432
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||| |  ||||||||| ||||||||||||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  1936609 atagttttaaaacccgactcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 1936510  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || |||| |||||||| ||||||||||||  ||||| ||||||||||| |||||||||||||||||||    
T  1936509 ccggatcaactcggatggctcggttagataactcggtcttgagattaaatttatatagctatttaaccggattaaatc 1936432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 587 - 754
Target Start/End: Original strand, 11792385 - 11792562
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| ||| |||||||||| | ||||||||||||||| | || ||||||||| ||||||||||| ||||    
T  11792385 atagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactgaa 11792484  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||||||||||| |||||||||||   ||| | ||||||||||| |||||||||||||| ||||    
T  11792485 tcggaaccactcggatgactcggttagataactcggtccttagaataaatttatatagttatttaaccggattgaatc 11792562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 12704758 - 12704581
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||| |||| |||||||||||||||| |||||||||||||| | ||  |||||| | ||||||||| | ||||    
T  12704758 atagttttaaaactcggctcggtcatcgactaggcatgggtactgggtcactaagtcaatggtcgaaccactgagtcattgatcgaaccgcattactgaa 12704659  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||||||||||| ||||||||||||  ||||| ||||||||||  |||||||||||||||||||    
T  12704658 ccggatcaactcggatgactcggttagataactcggtcttgagattaaatttatataactatttaaccggattaaatc 12704581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 4414416 - 4414517
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||  ||| | |||||||||||||| ||||    
T  4414416 atagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcacttgttgaaccgcatgactgaa 4414515  T
Q  687 tc 688  Q
    ||    
T  4414516 tc 4414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 44352088 - 44352193
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| | |||||||| |||||||||  ||||||||||||||  ||| |||||||||| ||||| ||| |||||||||||||||| ||||    
T  44352088 atagttttaaaactcggttcggtcatcgactcggcataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactgaa 44352187  T
Q  687 tcagat 692  Q
    ||||||    
T  44352188 tcagat 44352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 587 - 755
Target Start/End: Original strand, 55675421 - 55675599
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgca-------- 678  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||  | ||  |||||||| ||||||||            
T  55675421 atagttttaaaactcggctcggtcatcgactcgacaggggtactgggtcaataggtcaatggtcgaatcactgagtcattggtcgaaccgcaagactaaa 55675520  T
Q  679 --tgattgaatcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatca 755  Q
       |||| | ||  ||| |||||||| ||||||||||||  ||||| ||||||||||| |||||||| |||||||||||    
T  55675521 ccggattaactcgaatggctcggttagataactcggtcttgagattaaatttatatagctatttaactggattaaatca 55675599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 54822048 - 54822153
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||||||  ||||||| |||||| | ||  ||| |||||||||||||||| ||||    
T  54822048 atagttttaaaactcggctcggtcatcgactcggcaggtgtactgggtcactgagtcaatgatcgaaccactgagtcactggttgaaccgcatgactgaa 54822147  T
Q  687 tcagat 692  Q
     |||||    
T  54822148 acagat 54822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 23611639 - 23611435
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| | |||||||| |||||||| ||| |||||||| | | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  23611639 atagttttaaaactcggttcggtcatcgactcggcggggatactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 23611540  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||| ||||||||| |||||||||||   ||||| ||||||||||| |||||||| ||||||| ||  |||||||  |||| | ||||    
T  23611539 tcgaaaccactcggataactcggttagataactcggtccttagattaaatttatatagttatttaactggattaactcggattgaatcggtgactcggtc 23611440  T
Q  777 acttt 781  Q
    |||||    
T  23611439 acttt 23611435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 680
Target Start/End: Complemental strand, 24776268 - 24776175
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatg 680  Q
    ||||||||||||||| |||||| ||| ||||||| || |||| ||||||||| |||| |||||||||| | ||||||||||||||||| |||||    
T  24776268 atagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgatggtcgaaccactggatcattggttgaactgcatg 24776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 974 - 1029
Target Start/End: Complemental strand, 28358579 - 28358523
Alignment:
Q  974 tactttactaaacctaattactgatactactagtgcaaca-ctcatttcttcaaaca 1029  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28358579 tactttactaaacctaattactgatactactagtgcaacacctcatttcttcaaaca 28358523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 8132792 - 8132891
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||| || ||||||||||||||  || |||||| |||| | ||  |||||||||||||||||||| ||||    
T  8132792 atagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcattggttgaaccgcatgactgaa 8132891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 591 - 654
Target Start/End: Original strand, 24394078 - 24394141
Alignment:
Q  591 ttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||    
T  24394078 ttttaaaactcggctcggtcatcgactcggcgggggtactgggtcactgggtcaatggtcgaac 24394141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 680
Target Start/End: Complemental strand, 29695534 - 29695441
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatg 680  Q
    ||||||||||||||| |||||||||| |||||| ||  | ||||||||||||  ||| ||||||||| |||||| ||| |||||||||||||||    
T  29695534 atagttttaaaactcggctcggtcatcgactcgacatagatactgggtcactgagtcgatggtcgaattattgggtcactggttgaaccgcatg 29695441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 587 - 686
Target Start/End: Complemental strand, 19916533 - 19916434
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||| | |||| |||||||||||| | | | ||||||||||| | || ||| ||||||||||||||||| ||||    
T  19916533 atagttttaaaactcggctcggtcatcgacacagcagaggtactgggtcattggattaatggtcgaaccactgaatcgttggttgaaccgcatgactgaa 19916434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 587 - 669
Target Start/End: Complemental strand, 8261137 - 8261055
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggt 669  Q
    ||||||||||||||| ||| || ||||||||||| |||||| ||| |||||| |||||||||| |||| ||||| ||||||||    
T  8261137 atagttttaaaactcggcttggacattgactcggtaggggtgctgagtcactgggtcaatggttgaaccattgggtcattggt 8261055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 587 - 669
Target Start/End: Complemental strand, 8274554 - 8274472
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggt 669  Q
    ||||||||||||||| ||| || ||||||||||| |||||| ||| |||||| |||||||||| |||| ||||| ||||||||    
T  8274554 atagttttaaaactcggcttggacattgactcggtaggggtgctgagtcactgggtcaatggttgaaccattgggtcattggt 8274472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 686
Target Start/End: Complemental strand, 6355072 - 6354973
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||  || ||| ||| |||||| ||| ||||||||||| ||||  ||| | |||||||||||||| ||||    
T  6355072 atagttttaaaactcggctcggtcatcgactcgatagaggttctgagtcactgggttaatggtcgaaccattgagtcaatagttgaaccgcatgactgaa 6354973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 690 - 781
Target Start/End: Original strand, 7648136 - 7648227
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||| ||| |||||||||||| ||  |||||||| |||| | |||||||||    
T  7648136 gatgactcggttagataactcggtccttagattaaatttatatagttatataaccggattaactcggattgaattggtgactcggtcacttt 7648227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 620 - 679
Target Start/End: Original strand, 8132334 - 8132393
Alignment:
Q  620 gcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    |||||||||||| |||||||||| ||||||  ||| ||||||||||||||||||||||||    
T  8132334 gcaggggtactgagtcactaggttaatggttaaaccattggatcattggttgaaccgcat 8132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 698
Target Start/End: Complemental strand, 32988341 - 32988230
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |  ||| ||| |||||||   ||||| ||||||||||||||| ||||||||| | ||  |||||||| |||||||||||  |||    
T  32988341 atagttttaaaactcggaccggccatcgactcggtgagggtagtgggtcactaggtcattggtcgaaccactgagtcattggtcgaaccgcatgaaagaa 32988242  T
Q  687 tcagatgactcg 698  Q
    || |||||||||    
T  32988241 tcggatgactcg 32988230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 690 - 781
Target Start/End: Original strand, 55497567 - 55497658
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | |||||||||    
T  55497567 gatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtcacttt 55497658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 587 - 681
Target Start/End: Original strand, 2859420 - 2859514
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    |||||||||||||||||  |||| || ||||||| | ||||| ||||||||| ||||||||||||||| | ||| ||| |||| |||| ||||||    
T  2859420 atagttttaaaactcagaccggtgatcgactcggtaagggtattgggtcactgggtcaatggtcgaaccactgggtcactggtcgaactgcatga 2859514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 26203779 - 26203678
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||| |||| |||||| ||| || |||||||||||  ||  |||||||||| || |  ||||||||||||| |||||| ||||    
T  26203779 atagttttaaaactcggctcgatcatcgactcgacagaggcactgggtcactgagtggatggtcgaaccatcgagtcattggttgaactgcatgactgaa 26203680  T
Q  687 tc 688  Q
    ||    
T  26203679 tc 26203678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 34856052 - 34856102
Alignment:
Q  631 gggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    ||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  34856052 gggtcactgagtcaatggtcgaaccactggatcattggttgaaccgcatga 34856102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 293652 - 293551
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |  |||||||||||||||   ||  |||||||||||  |||  ||||||||| ||||| ||| |||||||||||||||| ||||    
T  293652 atagttttaaaaatcggaccggtcattgactcggtgaggtcactgggtcactgagtcgttggtcgaaccattgggtcactggttgaaccgcatgactgaa 293553  T
Q  687 tc 688  Q
    ||    
T  293552 tc 293551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 587 - 679
Target Start/End: Complemental strand, 43245818 - 43245726
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    |||||||||||| ||  |||||  || |||||| |||||||| ||||||||| ||| ||||||||||| ||||  | | ||||||||||||||    
T  43245818 atagttttaaaattcgactcggctatcgactcgacaggggtattgggtcactgggttaatggtcgaaccattgagttactggttgaaccgcat 43245726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 7362122 - 7362220
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||  | |||||||| |||||| ||  |||| ||| ||||| | | ||||||||||| | |  ||||||||||||||||||||||||||    
T  7362122 atagttttaaaacttggttcggtcatcgactcgacaaaggtattggatcact-gattaatggtcgaaccactaaatcattggttgaaccgcatgattgaa 7362220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 678
Target Start/End: Original strand, 25510488 - 25510579
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgca 678  Q
    ||||||||||||||| |  ||||| | ||||||| | |||| |||||||||| | ||| |||| |||| | ||| |||||||||||||||||    
T  25510488 atagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgca 25510579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 614 - 669
Target Start/End: Original strand, 41848981 - 41849036
Alignment:
Q  614 gactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggt 669  Q
    ||||||| | ||||||||||||||| |||||||||||||| |||||| ||| ||||    
T  41848981 gactcggtaagggtactgggtcactgggtcaatggtcgaattattgggtcactggt 41849036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 587 - 681
Target Start/End: Original strand, 38519288 - 38519382
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    ||||||||||||||| ||||   ||| |||| | ||  |||| ||||||||| ||| ||||||||||| ||||  ||| ||||||||||||||||    
T  38519288 atagttttaaaactcggctcaaccatcgacttgacaaaggtattgggtcactgggttaatggtcgaaccattgagtcactggttgaaccgcatga 38519382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 4e-53; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 3988706 - 3988897
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||  ||||| |||||||||||||||||||| ||||    
T  3988706 atagttttaaaactcggctcggtcattgactcggcagggatactgggtcattgggtcaatggtcgaatcattgggtcattggttgaaccgcatgactgaa 3988805  T
Q  687 tcagat-gactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
     | |||  ||||||    || ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  3988806 ccggatcaactcgg----atgactcggtctaaagattcaatttgcatagatatttaaccggattaaatcaaattaaattagtgattcggtcacttt 3988897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 35305398 - 35305221
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  35305398 atagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 35305299  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||||||||||| ||||||||||||  ||||| ||||||||||| ||| |||||| ||||||||    
T  35305298 ccggatcaactcggatgactcggttagataactcggtcttgagattaaatttatatagctatctaaccgaattaaatc 35305221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 587 - 751
Target Start/End: Original strand, 24128754 - 24128928
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | || ||||||||| ||||||||||| ||||    
T  24128754 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactgaa 24128853  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||| ||||   ||||| ||||||||||| ||||||||||||||||    
T  24128854 tcggaaccactcggatgactcggttagataactaggtccttagattaaatttatatagttatttaaccggattaa 24128928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 17513021 - 17513225
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| |||| |||||| | ||    
T  17513021 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaactgcatgactaaa 17513120  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  17513121 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 17513220  T
Q  777 acttt 781  Q
    |||||    
T  17513221 acttt 17513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 587 - 679
Target Start/End: Original strand, 19881940 - 19882032
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||  |||||||| |||||||||    
T  19881940 atagttttaaaactcggctcggtcattgactcggcgggggtactgggtcacttggtcaatggtcgaaccagtgagtcattggtcgaaccgcat 19882032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 23293288 - 23293114
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||| | ||| ||||||||||| | ||  |||||||| ||||||||||| ||||    
T  23293288 atagttttaaaactcggctcggtcattgactcggcgagggtactgggtcaatgggtgaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 23293189  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||||||||   ||||| |||||| |||| ||||||||||||||||    
T  23293188 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttacatagttatttaaccggattaa 23293114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 587 - 692
Target Start/End: Complemental strand, 6065613 - 6065508
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |  ||||||| || ||||||||||||||| |||||| ||| ||||||||||| | ||| |||||||||||||||||||| ||||    
T  6065613 atagttttaaaactcggtccggtcatcgattcggcaggggtactgagtcactgggttaatggtcgaaccactgggtcattggttgaaccgcatgactgaa 6065514  T
Q  687 tcagat 692  Q
    ||||||    
T  6065513 tcagat 6065508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 575 - 761
Target Start/End: Complemental strand, 16106829 - 16106633
Alignment:
Q  575 atgtttgctagaatagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaac 674  Q
    |||||||| || ||||||||||||||| |||||||||| ||||||||| | ||| ||||||||| ||| ||||||||||| | ||  ||| |||||||||    
T  16106829 atgtttgcaagcatagttttaaaactcggctcggtcatcgactcggcaagagtattgggtcactgggttaatggtcgaaccactgagtcactggttgaac 16106730  T
Q  675 cgcatgattgaat----------cagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattga 761  Q
    ||||||| |||||          ||||| ||||||||| || ||||| ||| |||||| ||||| ||||| ||||||||  ||||||||| ||||||    
T  16106729 cgcatgactgaatcggattaaaccagataactcggttagatgactcgatcttaagattaaatttttatagctatttaactagattaaatcgaattga 16106633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 21800785 - 21800684
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||| |||||||| |||||||| ||||||||||||||  | ||| ||| ||||||||| |||||| ||||    
T  21800785 atagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaatcactgggtcactggttgaactgcatgactgaa 21800686  T
Q  687 tc 688  Q
    ||    
T  21800685 tc 21800684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 29523985 - 29523789
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||||||||        |||||||||| | ||  |||||||| ||||||||||| ||||    
T  29523985 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtca--------atggtcgaaccactgagtcattggtcgaaccgcatgactgaa 29523894  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
    || ||          ||||||||||| |||||||||||   ||||| ||||||||||| ||||||| |||||||| |||||||||||  |||| | ||||    
T  29523893 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcaaattgaatcggtgactcggtc 29523794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 7153438 - 7153641
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||| | |||||||||||||| | | | ||||||||||| | ||  |||||||| ||||||||||| ||||    
T  7153438 atagttttaaaactcggctcggtcatcgactcgacgggggtactgggtcaat-gattaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 7153536  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||| |||||||| ||  |||||||  |||| | ||||    
T  7153537 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaatcggattaactcggattgaatcggtgactcggtc 7153636  T
Q  777 acttt 781  Q
    |||||    
T  7153637 acttt 7153641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 692
Target Start/End: Complemental strand, 10810660 - 10810555
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||| |||| |||||||||  |||||||||||| | ||| |||| |||||| | ||| |||| ||||||||||||||| ||||    
T  10810660 atagttttaaaactcggctcgatcatcgactcggcaacggtactgggtcaatgggttaatgatcgaaccactgggtcatcggttgaaccgcatgactgaa 10810561  T
Q  687 tcagat 692  Q
    ||||||    
T  10810560 tcagat 10810555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 32878816 - 32878715
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||| | |||||||| ||||||||||||| || ||||||||||||||| | ||  |||||||| ||||||||| | ||||    
T  32878816 atagttttaaaactcggctcggtcgtcgactcggcgggggtactgggtccctgggtcaatggtcgaaccaatgagtcattggtcgaaccgcataactgaa 32878717  T
Q  687 tc 688  Q
    ||    
T  32878716 tc 32878715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 587 - 715
Target Start/End: Complemental strand, 22315293 - 22315165
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  ||||||||||||||||||||| ||||| ||||||   |||||||||||||| | |   ||| |||||||||| ||||||||||    
T  22315293 atagttttaaaactcgtctcggtcattgactcggcaggtgtactaggtcaccgagtcaatggtcgaaccactcagtcactggttgaaccacatgattgaa 22315194  T
Q  687 tcagatgactcggttaaataactcggtct 715  Q
     | ||| |||||| || || |||||||||    
T  22315193 ccggataactcggctagatcactcggtct 22315165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 886 - 933
Target Start/End: Original strand, 3989003 - 3989050
Alignment:
Q  886 gaagtaaaacctcaattaactttttccgttttcgtttattgcaaatac 933  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3989003 gaagtaaaacctcaattaactttttccgttttcgtttattgcaaatac 3989050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 587 - 714
Target Start/End: Complemental strand, 37254936 - 37254809
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |  |||||||||||||||   || ||||||||||||  |||| |||| |||| ||||| ||| ||||||||||||||||| |||    
T  37254936 atagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgatagaa 37254837  T
Q  687 tcagatgactcggttaaataactcggtc 714  Q
     | |||||||||||   |||||||||||    
T  37254836 ccggatgactcggtcttataactcggtc 37254809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 23250970 - 23251071
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||||||| ||||| |||||| | |||||||||||||||| | ||||||||||||| |  |  |||||||| ||||||||| | ||||    
T  23250970 atagttttaaaactcagctcagtcatcgactcgacgggggtactgggtcactggatcaatggtcgaaccagcgagtcattggtcgaaccgcataactgaa 23251069  T
Q  687 tc 688  Q
    ||    
T  23251070 tc 23251071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 37315036 - 37314840
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| || ||||| ||||||||||||||        |||||||||| | ||  |||||||| ||||||||||| ||||    
T  37315036 atagttttaaaactcggctcggtcatcgattcggcgggggtactgggtca--------atggtcgaaccactgagtcattggtcgaaccgcatgactgaa 37314945  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
    || ||          ||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  37314944 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 37314845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 39678305 - 39678509
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| ||   || ||||| |||||||||| |||||||||||| |  |||||||||||||  | ||  |||||||| ||||||||||| ||||    
T  39678305 atagttttaaaattcgattctgtcatcgactcggcagaggtactgggtcaatgagtcaatggtcgaatcactgagtcattggtcgaaccgcatgactgaa 39678404  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
    || ||          ||||||||||| |||||||||||   ||||| ||||||||||| |||||||| ||||||| ||  |||||||  |||| | ||||    
T  39678405 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaactggattaactcggattgaatcggtgactcggtc 39678504  T
Q  777 acttt 781  Q
    |||||    
T  39678505 acttt 39678509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 39062023 - 39061827
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||||| |||||| |||||||        |||||||||| | ||  |||||||| ||||||||||| ||||    
T  39062023 atagttttaaaattcggctcggtcatcgactcggcgggggtattgggtca--------atggtcgaaccactgagtcattggtcgaaccgcatgactgaa 39061932  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
    || ||          ||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  39061931 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 39061832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 698592 - 698675
Alignment:
Q  632 ggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatcagatgactcggttaaataactcggtct 715  Q
    ||||||| ||||| |||| |||| | || |||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  698592 ggtcactgggtcattggttgaaccactgaatcactggttgaaccgtatgattgaatcggatgactcggttgtataactcggtct 698675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 690 - 751
Target Start/End: Original strand, 14885405 - 14885466
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    ||||||||||||||||||||| |||   ||||| ||||||||||| ||||||||||||||||    
T  14885405 gatgactcggttaaataactcagtccttagattaaatttatatagttatttaaccggattaa 14885466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 37256087 - 37255986
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||  | | |||||||| ||||||| || || ||||| ||| | | ||||||||||||| ||||  || ||||||||||||||||||||||    
T  37256087 atagttttaaaaaccggttcggtcatcgactcggtagaggcactggatcaatggttcaatggtcgaaccattgagtcgttggttgaaccgcatgattgaa 37255988  T
Q  687 tc 688  Q
    ||    
T  37255987 tc 37255986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 587 - 654
Target Start/End: Original strand, 18540659 - 18540726
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||| ||||| |||| ||||||| ||||||||||| ||| | ||||| |||||||||    
T  18540659 atagttttaaaactcggctcgatcatcgactcggaaggggtactggatcattgggtcactggtcgaac 18540726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 16457850 - 16457749
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| || |||||| ||||| ||||||| |  || |||||| |||| | || |||| |||||||| ||||| | ||||    
T  16457850 atagttttaaaactcggctcggtcatcgattcggcatgggtattgggtcaatgagttaatggtggaaccactgaatcactggttgaatcgcataactgaa 16457751  T
Q  687 tc 688  Q
    ||    
T  16457750 tc 16457749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 27905623 - 27905728
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||| | ||| || ||| ||||||| || || | ||||||||| |||  |||||||||| | ||| |||| |||||||||| |||| ||||    
T  27905623 atagttttaaaacacggcttggccatcgactcggtagaggcattgggtcactgggtagatggtcgaaccactgggtcatcggttgaaccgtatgactgaa 27905722  T
Q  687 tcagat 692  Q
    ||||||    
T  27905723 tcagat 27905728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 41746866 - 41746971
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  ||||||||| || | || |  ||||||||||||||  |||  |||||||||  | ||||| |||||||||| |||||| ||||    
T  41746866 atagttttaaaactcgactcggtcatcgattaggtataggtactgggtcactgagtcgttggtcgaaccttcggatccttggttgaactgcatgactgaa 41746965  T
Q  687 tcagat 692  Q
    ||||||    
T  41746966 tcagat 41746971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 13814897 - 13815006
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaat----ggtcgaactattggatcattggttgaaccgcatgat 682  Q
    |||||||||||| ||||||||||||| ||||||| || |||| | | ||| |  ||| ||    |||||||| ||  ||||||||||||||||||||||     
T  13814897 atagttttaaaattcagctcggtcatcgactcggtagaggtatttgatcattgagtcgatcgatggtcgaaccatcagatcattggttgaaccgcatgac 13814996  T
Q  683 tgaatcagat 692  Q
    ||||||||||    
T  13814997 tgaatcagat 13815006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 998 - 1029
Target Start/End: Original strand, 3989374 - 3989405
Alignment:
Q  998 tactactagtgcaacactcatttcttcaaaca 1029  Q
    ||||||||||||||||||||||||||||||||    
T  3989374 tactactagtgcaacactcatttcttcaaaca 3989405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 587 - 751
Target Start/End: Original strand, 31900414 - 31900580
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| || ||||| |||||||||        ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  31900414 atagttttaaaattcggctcggtcatcgattcggcgggggtactg--------ggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 31900505  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||| ||||   ||||| ||||||||||| ||||||| ||||||||    
T  31900506 tcggaaccactcggatgactcggttagataacttggtccttagattaaatttatatagttatttaatcggattaa 31900580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 660
Target Start/End: Original strand, 12340397 - 12340470
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattgg 660  Q
    ||||||||||||||| ||||||| |||||||||| |  | |||||||||| |  |||| |||||||| ||||||    
T  12340397 atagttttaaaactcggctcggtgattgactcggtaatgttactgggtcaatgagtcattggtcgaattattgg 12340470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 763
Target Start/End: Complemental strand, 39761844 - 39761775
Alignment:
Q  694 actcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaat 763  Q
    ||||||||| ||||||||| ||  |||||  |||||| ||| |||||||||||||||||||  |||||||    
T  39761844 actcggttagataactcggccttgagattatatttatgtagctatttaaccggattaaatcggattgaat 39761775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 17954 - 17777
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||||||||  |||| ||||||||||||||||| |||| | ||| ||||||||||| ||||  |||||||||||||||||||| ||||    
T  17954 atagttttaaaactcagctcgaccattcactcggcaggggtactgagtcattgggttaatggtcgaaccattgagtcattggttgaaccgcatgactgaa 17855  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  17854 ccagatcaactcggatgattcggttaaataactcggtctagagattcaatttatataggtatttaaccggattgaatc 17777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 2e-36; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 587 - 769
Target Start/End: Original strand, 35758036 - 35758218
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| | |||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  35758036 atagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcagtgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 35758135  T
Q  687 tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtga 769  Q
    || ||   |||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  ||||||| |||||    
T  35758136 tcggaaccctcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcagtga 35758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 8761196 - 8761022
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| | |||||||| |||||||| |||||||||||||| ||||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  8761196 atagttttaaaactcggatcggtcatcgactcggcgggggtactgggtcaataggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 8761097  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  8761096 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 8761022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 18942250 - 18942351
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||| |||||||| |||||||| ||||||||||||||| | ||||| | |||||||||||||||| ||||    
T  18942250 atagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaaccactggatgactggttgaaccgcatgactgaa 18942349  T
Q  687 tc 688  Q
    ||    
T  18942350 tc 18942351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 36745969 - 36745765
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| || ||||| || ||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  36745969 atagttttaaaactcggctcggtcatcgattcggcgggagtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 36745870  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  36745869 tcggaatcactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 36745770  T
Q  777 acttt 781  Q
    |||||    
T  36745769 acttt 36745765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 587 - 679
Target Start/End: Original strand, 29823258 - 29823350
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    |||||||||||| || |||||||||| |||||||| |||||||||||||||||||||||||||||||| | || ||||||| | |||||||||    
T  29823258 atagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcactaggtcaatggtcgaaccagtgaatcattgatcgaaccgcat 29823350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 27194874 - 27194700
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||| | | ||||||| || |||| | ||  |||||||| ||||| ||||| ||||    
T  27194874 atagttttaaaactcggctcggtcatcgactcggctggggtactgggttaatgggtcaatagttgaaccactgtgtcattggtcgaaccacatgactgaa 27194775  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              |||||||||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  27194774 ccggaaccactcagatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 27194700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 6459708 - 6459809
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||| |  || ||||||||||| | ||| ||| |||||||||||||||| ||||    
T  6459708 atagttttaaaactcagctcggtcgtcgactcggcatgggtactgggtcaatgagttaatggtcgaaccactgggtcactggttgaaccgcatgactgaa 6459807  T
Q  687 tc 688  Q
    ||    
T  6459808 tc 6459809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 40143905 - 40144109
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| | |  |||| |||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  40143905 atagttttaaaactcggctcggtcatcgactcggcggagaaactgagtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 40144004  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  40144005 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 40144104  T
Q  777 acttt 781  Q
    |||||    
T  40144105 acttt 40144109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 603 - 751
Target Start/End: Original strand, 14635362 - 14635520
Alignment:
Q  603 gctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa----------tcagat 692  Q
    |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||          || |||    
T  14635362 gctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccggaaccactcggat 14635461  T
Q  693 gactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    |||||||||| |||||||||||   ||||| ||||||||||| ||| ||||||||||||    
T  14635462 gactcggttagataactcggtccttagattaaatttatatagttatataaccggattaa 14635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 38040624 - 38040725
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| || ||||| | |||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  38040624 atagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 38040723  T
Q  687 tc 688  Q
    ||    
T  38040724 tc 38040725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 587 - 687
Target Start/End: Complemental strand, 32383990 - 32383890
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||  |||| |||||||||||||||| |||| | |||| | ||  |||||||||||||||||||| ||||    
T  32383990 atagttttaaaactcggctcggtcatcgactcgatagggatactgggtcactaggttaatgattgaaccactgtgtcattggttgaaccgcatgactgaa 32383891  T
Q  687 t 687  Q
    |    
T  32383890 t 32383890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 603 - 751
Target Start/End: Original strand, 3752471 - 3752629
Alignment:
Q  603 gctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa----------tcagat 692  Q
    |||||||||| |||||||| |||||||||||||| | ||||||||||||||  | ||  |||||||| ||||||||||| ||||          || |||    
T  3752471 gctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaagcagtgagtcattggtcgaaccgcatgactgaaccggaaccactcggat 3752570  T
Q  693 gactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    |||||||||| |||||||||||   ||||| ||||||||||| ||| ||||||||||||    
T  3752571 gactcggttagataactcggtccttagattaaatttatatagttatataaccggattaa 3752629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 17644308 - 17644207
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  ||||||||| || |||| |||||||  |||||||| ||||||||||||||| | ||||||| |||| ||||| ||||| ||||    
T  17644308 atagttttaaaactcgactcggtcatcgattcggtaggggtatcgggtcactgggtcaatggtcgaaccactggatcaatggtcgaaccacatgactgaa 17644209  T
Q  687 tc 688  Q
    ||    
T  17644208 tc 17644207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 588 - 686
Target Start/End: Original strand, 13956932 - 13957030
Alignment:
Q  588 tagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||| |||||||||| |||||||||  |||||||||||| |  || ||||||||||| | ||  ||| |||||||||||||||| ||||    
T  13956932 tagttttaaaactcggctcggtcatcgactcggcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 13957030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 35456508 - 35456609
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||||||  ||| || ||||||||||| ||| | | ||||||||||||| | ||  ||| |||||||||||||||| ||||    
T  35456508 atagttttaaaactcggctcggtcatcaacttgggaggggtactggttcattggatcaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 35456607  T
Q  687 tc 688  Q
    ||    
T  35456608 tc 35456609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 587 - 647
Target Start/End: Complemental strand, 389756 - 389696
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatg 647  Q
    ||||||||||||||| |||||||||| || |||||||||||||| ||||||| ||||||||    
T  389756 atagttttaaaactcggctcggtcatcgattcggcaggggtactaggtcactgggtcaatg 389696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 654
Target Start/End: Original strand, 6273129 - 6273196
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||| | | ||| |||||||||||    
T  6273129 atagttttaaaactcggctcggtcatcgactcggcaggggcactgggttattgggttaatggtcgaac 6273196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 690 - 753
Target Start/End: Original strand, 29293420 - 29293483
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaat 753  Q
    ||||||||| ||  ||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  29293420 gatgactcgcttggataactcggtcttgagattaaatttatatagatatttaaccggattaaat 29293483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 587 - 681
Target Start/End: Complemental strand, 814875 - 814781
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    ||||||||||||||||| ||||| || ||||||| | || |||||| ||||| ||||||||||||||| | ||||||| || | |||| ||||||    
T  814875 atagttttaaaactcagatcggtgatcgactcggtaaggatactggatcactgggtcaatggtcgaaccactggatcactgatcgaactgcatga 814781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 14352040 - 14351939
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||| ||||| | ||| ||| |  || ||||||||||| | ||  ||||| |||||||||||||| ||||    
T  14352040 atagttttaaaactcggctcggtcatcgactcggtaggggcattggatcagtgagttaatggtcgaaccactgagtcattagttgaaccgcatgactgaa 14351941  T
Q  687 tc 688  Q
    ||    
T  14351940 tc 14351939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 626 - 686
Target Start/End: Original strand, 23015073 - 23015133
Alignment:
Q  626 gtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||  |||| ||||||||| ||||| |||||||||||||||||||| ||||    
T  23015073 gtactgggtcactgagtcattggtcgaaccattgggtcattggttgaaccgcatgactgaa 23015133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 694 - 754
Target Start/End: Complemental strand, 39051920 - 39051860
Alignment:
Q  694 actcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
    ||||||||| ||| |||||||| |||||| ||||||||||| |||||||| ||||||||||    
T  39051920 actcggttagatatctcggtcttaagattaaatttatatagctatttaactggattaaatc 39051860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 715
Target Start/End: Complemental strand, 28887450 - 28887398
Alignment:
Q  663 cattggttgaaccgcatgattgaatcagatgactcggttaaataactcggtct 715  Q
    ||||||||||||||||||||  || | ||||||||| ||||||||||||||||    
T  28887450 cattggttgaaccgcatgataaaaccggatgactcgattaaataactcggtct 28887398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 641 - 681
Target Start/End: Complemental strand, 33224990 - 33224950
Alignment:
Q  641 gtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  33224990 gtcaatggtcgaaccactggatcattggttgaaccgcatga 33224950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 547 - 585
Target Start/End: Original strand, 16352147 - 16352185
Alignment:
Q  547 ggattagggttttggaattagggtaagcatgtttgctag 585  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  16352147 ggattagggtttggcaattagggtaagcatgtttgctag 16352185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 690 - 751
Target Start/End: Complemental strand, 26166199 - 26166138
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||| |||| || ||||||||    
T  26166199 gatgactcggttagataactcggtccttagattaaatttatatagttattaaatcggattaa 26166138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 9e-36; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 19726815 - 19726611
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  19726815 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 19726716  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              |||||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  ||||||| ||||| | ||||    
T  19726715 tcggaaccactcagatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcagtgactcggtc 19726616  T
Q  777 acttt 781  Q
    |||||    
T  19726615 acttt 19726611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 40485655 - 40485451
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  40485655 atagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 40485556  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  40485555 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 40485456  T
Q  777 acttt 781  Q
    |||||    
T  40485455 acttt 40485451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 42063463 - 42063667
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  42063463 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 42063562  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  42063563 ccggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 42063662  T
Q  777 acttt 781  Q
    |||||    
T  42063663 acttt 42063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 41726460 - 41726256
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| | |||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  41726460 atagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 41726361  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  41726360 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 41726261  T
Q  777 acttt 781  Q
    |||||    
T  41726260 acttt 41726256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 44056604 - 44056427
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||  ||||| ||||||||||||||| | ||  |||||||| |||||| |||| ||||    
T  44056604 atagttttaaaactcagctcgatcatcgactcggcaggggtactgaatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgtatgactgaa 44056505  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || |||||||| |||| ||||||||||||  ||||| ||||||||||| ||||||||| |||||||||    
T  44056504 ccggatcaactcggatgactcagttagataactcggtcttgagattaaatttatatagctatttaaccagattaaatc 44056427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 36833905 - 36834004
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||| | || ||||||| | ||||||||||| ||||    
T  36833905 atagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggtcaatggtcgaaccactgaatcattgatcgaaccgcatgactgaa 36834004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 31008637 - 31008463
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || | |||||||| |||||||| ||||||||| |||| | ||||||||||||||| | ||  |||||||| ||||||||||||||||    
T  31008637 atagttttaaaattcggttcggtcatcgactcggcgggggtactgagtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgattgaa 31008538  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| ||||||| |||   ||||| ||||||||||| ||||||||||||||||    
T  31008537 tcggaaccactcggatgactcggttagataactcagtccttagattaaatttatatagttatttaaccggattaa 31008463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 587 - 686
Target Start/End: Complemental strand, 32493287 - 32493188
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||| ||||| ||||||| |  || ||||||||||| | |||||||||||||||||||||||| ||||    
T  32493287 atagttttaaaactcggctcggtcatcgactcggcatgggtattgggtcagtgagttaatggtcgaaccactggatcattggttgaaccgcatgactgaa 32493188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 8015023 - 8014922
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| ||||||| | ||||||||||||| | ||  |||||||| ||||||||| | ||||    
T  8015023 atagttttaaaactcggctcggtcattgactcggcgggggtactaggtcactggatcaatggtcgaaccagtgagtcattggtcgaaccgcataactgaa 8014924  T
Q  687 tc 688  Q
    ||    
T  8014923 tc 8014922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 30360456 - 30360660
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| || ||||| | |||||||||||| | ||||||||||||||| | ||  |||||| | ||||||||||| ||||    
T  30360456 atagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattgttcgaaccgcatgactgaa 30360555  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||| ||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| ||| ||    
T  30360556 tcggaaccactcggatgacttggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgacttgatc 30360655  T
Q  777 acttt 781  Q
    |||||    
T  30360656 acttt 30360660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 13487251 - 13487048
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| || ||||| |||||||||| ||| | | ||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  13487251 atagttttaaaattcggctcggtcatcgaatcggc-ggggtactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 13487153  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
    || ||          ||||||||||| |||||||||||   |||||  |||||||||| |||||||||||||||| ||  |||||||  |||||| ||||    
T  13487152 tcggaaccacgcggatgactcggttagataactcggtccttagattatatttatatagttatttaaccggattaactcggattgaatcggtgattcggtc 13487053  T
Q  777 acttt 781  Q
    |||||    
T  13487052 acttt 13487048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 18656726 - 18656557
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||        |||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  18656726 atagttttaaaactcggctcggtcatcgactcggcaggggtactgg--------gtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 18656635  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||| |||||||||||||||    
T  18656634 ccggatcaactcggatgactcggttagataactcggtcgtgagattaaatttatatagctatctaaccggattaaatc 18656557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 582 - 781
Target Start/End: Original strand, 14910091 - 14910300
Alignment:
Q  582 ctagaatagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    |||| ||||||||||||||| |||||||||| |||||||| || ||||||| ||| | |||||||| |||||| | ||  |||||||| |||||||||||    
T  14910091 ctagcatagttttaaaactcggctcggtcatcgactcggcgggagtactggatcaatgggtcaatgatcgaaccactgagtcattggtcgaaccgcatga 14910190  T
Q  682 ttgaatcag----------atgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatt 771  Q
     | |||| |          |||||||||||| |||||||| ||   ||||| ||||||||| | |||||||||||||||| ||  |||||||  |||| |    
T  14910191 ctaaatcggaaccactcgaatgactcggttagataactcgatccttagattaaatttatattgttatttaaccggattaactcggattgaatcggtgact 14910290  T
Q  772 tggtcacttt 781  Q
     |||||||||    
T  14910291 cggtcacttt 14910300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 3655858 - 3656062
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||||| ||| |||||| ||| | | ||||||||||||| | ||  |||||||| ||||||||||| | ||    
T  3655858 atagttttaaaattcggctcggtcatcgactcggcggggatactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactaaa 3655957  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| ||||||||||    ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  3655958 tcggaaccactcggatgactcggttagataactcggttcttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 3656057  T
Q  777 acttt 781  Q
    |||||    
T  3656058 acttt 3656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 603 - 688
Target Start/End: Complemental strand, 28761767 - 28761682
Alignment:
Q  603 gctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatc 688  Q
    |||||||||| ||||||||||||||||||||| | | ||||||||||||||| | ||  ||| |||||||||||||||| ||||||    
T  28761767 gctcggtcatcgactcggcaggggtactgggttattgggtcaatggtcgaaccactgagtcactggttgaaccgcatgactgaatc 28761682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 754
Target Start/End: Original strand, 39375123 - 39375292
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  || |||||| |||||| ||||||||||||||||        |||||||||| | ||  |||||||| ||||||||||| ||||    
T  39375123 atagttttaaaactcgtcttggtcatcgactcgacaggggtactgggtca--------atggtcgaaccactgagtcattggtcgaaccgcatgactgaa 39375214  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||||||||||| ||||||||||||  ||||| ||||||||||| |||||||||||||||||||    
T  39375215 ccggatcaactcggatgactcggttagataactcggtcttgagattaaatttatatagctatttaaccggattaaatc 39375292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 640 - 781
Target Start/End: Complemental strand, 5970052 - 5969901
Alignment:
Q  640 ggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatcaga----------tgactcggttaaataactcggtctaaagattcaattta 729  Q
    ||||||||||||||| ||||  |||||||||||||||||||| |||||| ||          ||||||||||| |||||||||||   ||||| ||||||    
T  5970052 ggtcaatggtcgaaccattgagtcattggttgaaccgcatgactgaatcggaaccactcggatgactcggttagataactcggtccttagattaaattta 5969953  T
Q  730 tatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||| ||| |||||||||||| ||  |||||||  |||||| |||||||||    
T  5969952 tatagttatataaccggattaactcggattgaatcggtgattcggtcacttt 5969901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 36658516 - 36658712
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||  ||||||||||||||        |||||||||| | ||  |||||||| ||||||||||| ||||    
T  36658516 atagttttaaaactcggctcggtcatcgactcggtgggggtactgggtca--------atggtcgaaccactgagtcattggtcgaaccgcatgactgaa 36658607  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
    || ||          ||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  36658608 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 36658707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 587 - 682
Target Start/End: Original strand, 11031031 - 11031126
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    ||||||||||||||| |  |||||||  ||||||  ||| |||||||||||| |||||||||||||||  | || |||||||||||||||||||||    
T  11031031 atagttttaaaactcggaccggtcatcaactcggtggggatactgggtcactgggtcaatggtcgaaccgtcgggtcattggttgaaccgcatgat 11031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 587 - 638
Target Start/End: Complemental strand, 4455449 - 4455398
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcact 638  Q
    ||||||||||||||  |||||| ||| |||||||||||||||||||||||||    
T  4455449 atagttttaaaacttggctcggccatcgactcggcaggggtactgggtcact 4455398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 587 - 682
Target Start/End: Complemental strand, 36823544 - 36823449
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    ||||||||||||||| |  |||||||||||||||   || ||||||||||||  || | |||| |||| ||||| ||| |||||||||||||||||    
T  36823544 atagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagttattggttgaaccattgggtcactggttgaaccgcatgat 36823449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 587 - 681
Target Start/End: Complemental strand, 12639460 - 12639366
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    |||||||||||| || |||||   |||||||||  |||| ||||  |||||| |||||||||| |||| ||||  ||||||||||||||||||||    
T  12639460 atagttttaaaattcggctcgaaaattgactcgagagggatactaagtcactcggtcaatggttgaaccattgagtcattggttgaaccgcatga 12639366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 690 - 764
Target Start/End: Original strand, 39024507 - 39024580
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaatt 764  Q
    ||||||| ||||| ||||||||||||  ||||| ||||||||||| ||||||||| ||||||||| |||| ||||    
T  39024507 gatgacttggttagataactcggtcttgagattaaatttatatagctatttaacc-gattaaatcgaatttaatt 39024580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 606 - 688
Target Start/End: Complemental strand, 45219611 - 45219529
Alignment:
Q  606 cggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatc 688  Q
    |||||||||||||||   ||  |||||||||||  |||| ||||||||| ||||| ||| |||||||||||||||| ||||||    
T  45219611 cggtcattgactcggtgaggtcactgggtcactgagtcattggtcgaaccattgggtcaatggttgaaccgcatgactgaatc 45219529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 690 - 751
Target Start/End: Complemental strand, 27679253 - 27679192
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    ||||||||||||| |||||||| ||   ||||| ||||||||||| ||||||||||||||||    
T  27679253 gatgactcggttagataactcgatccttagattaaatttatatagttatttaaccggattaa 27679192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 615 - 679
Target Start/End: Original strand, 6545712 - 6545776
Alignment:
Q  615 actcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    ||||||| |||||||||||||||| ||||||||||||||| |  |  |||||||| |||||||||    
T  6545712 actcggcgggggtactgggtcactgggtcaatggtcgaaccagcgagtcattggtcgaaccgcat 6545776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 682
Target Start/End: Complemental strand, 24279705 - 24279610
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    ||||||||||||||| | ||||||||||||| | |  || ||||||||||||  |||| |||| |||  ||||| ||| | |||||||||||||||    
T  24279705 atagttttaaaactcggatcggtcattgacttgacgaggttactgggtcactgagtcattggttgaataattgggtcacttgttgaaccgcatgat 24279610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 2e-33; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 36099790 - 36099586
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  36099790 atagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 36099691  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  36099690 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 36099591  T
Q  777 acttt 781  Q
    |||||    
T  36099590 acttt 36099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 588 - 756
Target Start/End: Complemental strand, 33628360 - 33628182
Alignment:
Q  588 tagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa- 686  Q
    |||||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||| |||| ||||| |||||||| ||||||||||| | ||     
T  33628360 tagttttaaaactcggctcggacattgactcggcaggggtactgagtcactgggtcaatggttgaaccattgggtcattggtcgaaccgcatgactaaac 33628261  T
Q  687 ---------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaa 756  Q
             || ||||||||||||  ||||||||||||  ||||| ||||||||||| |||||||||||||| ||||||    
T  33628260 cggatcaactcggatgactcggttggataactcggtcttgagattaaatttatatagctatttaaccggattgaatcaa 33628182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 586 - 754
Target Start/End: Original strand, 10198307 - 10198485
Alignment:
Q  586 aatagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattga 685  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||| ||||| ||||||||||||||| | ||  |||||||| ||||||||||| |||    
T  10198307 aatagttttaaaactcggctcggtcatcgactcggcaggggtattggatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 10198406  T
Q  686 a----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
    |          || ||||||||||||| |||||||| |||  ||||| ||||||||||| |||||||| ||||||||||    
T  10198407 accggatcaactcggatgactcggttagataactcgatcttgagattaaatttatatagctatttaactggattaaatc 10198485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 29983236 - 29983440
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| | |||||||| |||||||  |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  29983236 atagttttaaaactcggttcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 29983335  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              |||||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  29983336 tcggaaccactcagatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 29983435  T
Q  777 acttt 781  Q
    |||||    
T  29983436 acttt 29983440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 11734344 - 11734170
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  11734344 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 11734245  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||| ||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  11734244 tcggaaccactcggataactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 11734170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 16217107 - 16216930
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||| ||| ||||| ||||||||| ||||||||||||||| | ||  |||||||| ||||| ||||| ||||    
T  16217107 atagttttaaaactcggctcggtcatcgactcagcatgggtattgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccacatgactgaa 16217008  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||||||||||| ||||||| ||||  ||||| ||||||||||| |||||||||||||||||||    
T  16217007 ccggatcaactcggatgactcggttagataactcagtcttgagattaaatttatatagttatttaaccggattaaatc 16216930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 36858134 - 36858338
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| ||| |||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  36858134 atagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 36858233  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| |||||||| || |||||||||||||||| ||  |||||||  |||| | ||||    
T  36858234 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatacagttatttaaccggattaactcggattgaatcggtgactcggtc 36858333  T
Q  777 acttt 781  Q
    |||||    
T  36858334 acttt 36858338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 587 - 754
Target Start/End: Complemental strand, 24096822 - 24096645
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||||||| | ||||||||||||| | ||  |||||||| ||||||||||  ||||    
T  24096822 atagttttaaaactcggttcggtcatcgattcggcaggggtactgggtcactggatcaatggtcgaaccactgagtcattggtcgaaccgcatgtctgaa 24096723  T
Q  687 tcaga----------tgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
     ||||          ||||||||||| |||||||| |||  ||||| ||||||||||  |||||||||||||||||||    
T  24096722 ccagatcaactcgggtgactcggttagataactcgatcttgagattaaatttatataactatttaaccggattaaatc 24096645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 44606034 - 44605860
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||||| |||||||||||||| | |||||||||| |||| | ||  |||||||| ||||||||||| ||||    
T  44606034 atagttttaaaattcggctcggtcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaa 44605935  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||  |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  44605934 ccggaaccactcggatgactcggtttgataactcggtccttagattaaatttatatagttatttaaccggattaa 44605860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 45269552 - 45269451
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| | |||||||||||||| ||||||||||||||| | ||  |||||||| ||||||||| | ||||    
T  45269552 atagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcactgggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactgaa 45269453  T
Q  687 tc 688  Q
    ||    
T  45269452 tc 45269451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 676
Target Start/End: Complemental strand, 14802062 - 14801973
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccg 676  Q
    ||||||||||||||| |||||||||| |||||||| |||||||| ||||| | ||||||||||||||| ||||  |||||||| ||||||    
T  14802062 atagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaaccg 14801973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 676
Target Start/End: Complemental strand, 15249054 - 15248965
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccg 676  Q
    ||||||||||||||| |||||||||| |||||||| |||||||| ||||| | ||||||||||||||| ||||  |||||||| ||||||    
T  15249054 atagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaaccg 15248965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 587 - 681
Target Start/End: Complemental strand, 34192005 - 34191911
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    ||||||||||||||| ||||||| || ||||| ||||||||||||| ||||| |||  |||||||||| | ||  ||||||||||||||||||||    
T  34192005 atagttttaaaactcggctcggtgatcgactctgcaggggtactggatcactgggttgatggtcgaaccactgagtcattggttgaaccgcatga 34191911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 1582156 - 1582257
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||| ||||| | ||||||||| |  ||||||||||||||  |||  |||||| ||||||||||||| ||||    
T  1582156 atagttttaaaactcggctcggtcatcgactcagcaggtgcactgggtcaatgagtcaatggtcgaaccgttgagtcattgattgaaccgcatgactgaa 1582255  T
Q  687 tc 688  Q
    ||    
T  1582256 tc 1582257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 31813489 - 31813590
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||| ||| | ||| ||||||||||| | ||  ||| ||||||||  |||||||||||    
T  31813489 atagttttaaaactcgactcggtcatcgactcggcaggggtactggttcaatgggttaatggtcgaaccactgagtcagtggttgaattgcatgattgaa 31813588  T
Q  687 tc 688  Q
    ||    
T  31813589 tc 31813590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 690 - 763
Target Start/End: Complemental strand, 20131342 - 20131269
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaat 763  Q
    |||||||| |||| |||| ||||||| |||||| ||||||||||| |||||||||||||||||||  |||||||    
T  20131342 gatgactcagttagataattcggtcttaagattaaatttatatagctatttaaccggattaaatcggattgaat 20131269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 588 - 676
Target Start/End: Original strand, 5418899 - 5418987
Alignment:
Q  588 tagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccg 676  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||| | | ||| ||||||||||| | ||  ||| |||||||||||    
T  5418899 tagttttaaaactcggctcggtcatcgactcggcagaggtactgggttaatgggttaatggtcgaaccactgagtcactggttgaaccg 5418987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 587 - 679
Target Start/End: Original strand, 9822520 - 9822612
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    ||||||||||||||| ||||| |||| || ||||| |||||| |||||||||  |||||||||||||| | ||  |||||||| |||||||||    
T  9822520 atagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcat 9822612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 587 - 679
Target Start/End: Original strand, 10724445 - 10724537
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    ||||||||||||||| ||||| |||| || ||||| |||||| |||||||||  |||||||||||||| | ||  |||||||| |||||||||    
T  10724445 atagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcat 10724537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 46170642 - 46170741
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| ||||||||||||  ||||||||| | ||| ||||||||||| | ||  ||| |||| ||||||||||| ||||    
T  46170642 atagttttaaaattcggctcggtcatcgactcggcagggacactgggtcattgggttaatggtcgaaccactgagtcaatggtcgaaccgcatgaatgaa 46170741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 587 - 751
Target Start/End: Original strand, 47423454 - 47423620
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||| || || ||||| ||||||||||||||        |||||||||| | ||  |||||||| ||||||||||| ||||    
T  47423454 atagttttaaaactcggctcggttatcgattcggcgggggtactgggtca--------atggtcgaaccactgagtcattggtcgaaccgcatgactgaa 47423545  T
Q  687 tc----------agatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    ||          |||||| ||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  47423546 tcggaaccactcagatgattcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 47423620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 10992818 - 10992717
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||| | | ||||||||||||||||||||||| |  || ||||||||||| | |   ||| ||||||||| |||||| ||||    
T  10992818 atagttttaaaactcggctcggccgtcgactcggcaggggtactgggtcaatgagttaatggtcgaaccactaagtcactggttgaactgcatgactgaa 10992719  T
Q  687 tc 688  Q
    ||    
T  10992718 tc 10992717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 680
Target Start/End: Complemental strand, 16198810 - 16198718
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatg 680  Q
    ||||||||||||||| |||||| ||| ||||||| || |||| ||||||||| |||| || ||||||| | ||| ||| |||||||||||||||    
T  16198810 atagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgat-gtcgaaccactgggtcactggttgaaccgcatg 16198718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 34259376 - 34259275
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||| | ||||||||| ||||| | ||||| |  || ||||||||||| | ||  ||| |||||||||||||||| ||||    
T  34259376 atagttttaaaactcggctcggtcgtcgactcggcatgggtattaggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 34259277  T
Q  687 tc 688  Q
    ||    
T  34259276 tc 34259275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 587 - 682
Target Start/End: Original strand, 16560920 - 16561015
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    |||||||||||||||    |||||||||||||||   || ||||||||||||  |||| |||| |||| ||||| ||| |||||||||||||||||    
T  16560920 atagttttaaaactcgaaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgat 16561015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 587 - 682
Target Start/End: Complemental strand, 16604742 - 16604647
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    |||||||||||||||    |||||||||||||||   || ||||||||||||  |||| |||| |||| ||||| ||| |||||||||||||||||    
T  16604742 atagttttaaaactcgaaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgat 16604647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 33610591 - 33610696
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||| |||||  |||| | | |||||||  ||||||  || ||||||||||| | ||  |||||||||||||||||||| ||||    
T  33610591 atagttttaaaattctgctcagtcatcaactctgtaagggtactaagtcactgagttaatggtcgaaccactgagtcattggttgaaccgcatgactgaa 33610690  T
Q  687 tcagat 692  Q
    ||||||    
T  33610691 tcagat 33610696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 630 - 698
Target Start/End: Original strand, 49095810 - 49095878
Alignment:
Q  630 tgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatcagatgactcg 698  Q
    ||||||||||| ||| ||||||||||| || |||||| || |||||||||||  ||||| |||||||||    
T  49095810 tgggtcactagatcattggtcgaactactgaatcatttgtcgaaccgcatgaaagaatcggatgactcg 49095878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 8420032 - 8419974
Alignment:
Q  624 gggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgat 682  Q
    ||||| ||||||||| ||||| ||||||||| ||||| ||| |||| ||||||||||||    
T  8420032 gggtattgggtcactgggtcattggtcgaaccattgggtcactggtcgaaccgcatgat 8419974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 31958736 - 31958635
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || | ||||| || ||||||||   ||| ||||| |||| ||||| ||||||||| ||||  ||| |||| |||||||||||| |||    
T  31958736 atagttttaaaaatcggatcggtgatcgactcggctaaggttctgggccactgggtcattggtcgaaccattgagtcactggtcgaaccgcatgatagaa 31958637  T
Q  687 tc 688  Q
    ||    
T  31958636 tc 31958635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 9e-33; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 587 - 754
Target Start/End: Original strand, 27002523 - 27002691
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||| |||||| |||||||||| ||||||||||||||||| | |||| | |||| | ||    
T  27002523 atagttttaaaactcggctcggacattgactcggcaagggtactgagtcactgggtcaatggttgaactattggatcattgatcgaactgtatgactaaa 27002622  T
Q  687 tcagat-gactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
     | |||  ||||||||  ||||||||||||  ||||| ||||||||||| |||||||||||||| ||||    
T  27002623 ccggatcaactcggttggataactcggtcttgagattaaatttatatagctatttaaccggattgaatc 27002691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 587 - 751
Target Start/End: Original strand, 39850696 - 39850870
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||| ||||| | ||||||||||||||| | ||  |||||||| ||||||||||||||||    
T  39850696 atagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgattgaa 39850795  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  39850796 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 39850870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 30465188 - 30464984
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  30465188 atagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 30465089  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  30465088 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 30464989  T
Q  777 acttt 781  Q
    |||||    
T  30464988 acttt 30464984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 587 - 751
Target Start/End: Original strand, 29025260 - 29025434
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||| |||| | ||  |||||||| ||||||||||| ||||    
T  29025260 atagttttaaaactcagctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggttgaaccagtgagtcattggtcgaaccgcatgactgaa 29025359  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||| ||||||||||||    
T  29025360 ccggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatataaccggattaa 29025434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 587 - 762
Target Start/End: Complemental strand, 51537291 - 51537106
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat------- 679  Q
    ||||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||| ||||||||||| | ||| ||| ||||||||||||||           
T  51537291 atagttttaaaactcggctcggtcatcgactcggcaggggtattgggtcactgggttaatggtcgaaccactgggtcactggttgaaccgcatgtctgaa 51537192  T
Q  680 ---gattgaatcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaa 762  Q
       |||| || | ||| ||||||||| || ||||||||| |||||| ||||| ||||  ||||||||| ||||||||| |||||||    
T  51537191 tcggattaaaccggataactcggttagatgactcggtcttaagattaaatttttataactatttaaccagattaaatcgaattgaa 51537106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 23241964 - 23241760
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||||| |||||| ||||||| | ||||||||||||||| | || ||||||||| ||||||||||| ||||    
T  23241964 atagttttaaaattcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactgaa 23241865  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||| | ||||||||||| |||||||||||||||| ||  |||||||  |||| | ||||    
T  23241864 tcggaaccactcggatgactcggttagataactcggtccttagaataaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtc 23241765  T
Q  777 acttt 781  Q
    |||||    
T  23241764 acttt 23241760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 55258186 - 55258025
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||  |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  55258186 atagttttaaaactcggctcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 55258087  T
Q  687 tcag-atgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    || | |  ||||||    || ||||||||   ||||| ||||||||||| ||||||||||||||||    
T  55258086 tcggaaccactcgg----atgactcggtccttagattaaatttatatagttatttaaccggattaa 55258025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 587 - 686
Target Start/End: Complemental strand, 35054811 - 35054712
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||||| |  || ||||||||||| ||||| ||| |||||||||||||||| ||||    
T  35054811 atagttttaaaactcggctcggtcatcgactcggcatgggtactgggtcagtgagttaatggtcgaaccattgggtcactggttgaaccgcatgactgaa 35054712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 53351172 - 53351271
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||| |||| | ||  || ||||||||||||||||| ||||    
T  53351172 atagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattaggttaatggttgaaccactgagtcgttggttgaaccgcatgactgaa 53351271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 587 - 769
Target Start/End: Original strand, 45096289 - 45096482
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggt-actgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattga 685  Q
    ||||||||||||||| |||||| ||||||||||| |||||| ||||||||  | ||||||||||||||| |||||||||| ||||||||| ||||| | |    
T  45096289 atagttttaaaactcggctcggccattgactcgggaggggttactgggtcgatgggtcaatggtcgaaccattggatcatcggttgaaccacatgactta 45096388  T
Q  686 a----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtga 769  Q
    |          || |||||||| || | |||| |||||||  ||||| ||||||||||||||||||| ||| |||||||  |||||||| ||||    
T  45096389 accggatcaactcggatgactcagtaagataaatcggtcttgagattaaatttatatagatatttaagcgggttaaatctgattgaattggtga 45096482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 33634884 - 33635088
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| | ||| |||| |||||||| |||||||||||| | | ||||||||||||||| | ||  |||||||| |||||||||||| |||    
T  33634884 atagttttaaaactcggttcgatcatcgactcggcgggggtactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgatagaa 33634983  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||||| |||||| ||  |||||||  |||| | ||||    
T  33634984 tcggaacaactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccagattaactcggattgaatcggtgactcggtc 33635083  T
Q  777 acttt 781  Q
    |||||    
T  33635084 acttt 33635088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 587 - 686
Target Start/End: Original strand, 42907770 - 42907869
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||  | ||||||||||||| ||||||||| ||||| ||||||||||| | ||  |||||||||||||||||||| ||||    
T  42907770 atagttttaaaactcggctcggttgtcgactcggcaggggcactgggtcattaggttaatggtcgaaccactgagtcattggttgaaccgcatgactgaa 42907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 37599975 - 37599874
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||| ||| |||||||||||||| | | ||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  37599975 atagttttaaaactcggctcggtcatcgacttggcgggggtactgggtcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 37599876  T
Q  687 tc 688  Q
    ||    
T  37599875 tc 37599874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 587 - 742
Target Start/End: Original strand, 44201110 - 44201265
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||| || || ||||   ||||  ||| |||||||||| || || ||||| ||||||||||||||  |||    
T  44201110 atagttttaaaactcggctcggtcatcgactcggtagaggcactgaagcactgagtcgatggtcgaaccatcgggtcatttgttgaaccgcatgacagaa 44201209  T
Q  687 tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaa 742  Q
    || ||||||||||||| |||||  ||| |  ||||| ||||| ||||| |||||||    
T  44201210 tcggatgactcggttagataacctggtgtttagattaaatttgtataggtatttaa 44201265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 2849366 - 2849163
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||  ||| |||||||||| | ||| ||||||||||  ||||  |||||||| ||||||||||| ||||    
T  2849366 atagttttaaaactcggctcggtcatcgactcggt-gggatactgggtcaatgggttaatggtcgaatcattgagtcattggtcgaaccgcatgactgaa 2849268  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||  ||||||| ||  |||||||  |||| | ||||    
T  2849267 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaattggattaactcttattgaatcggtgactcggtc 2849168  T
Q  777 acttt 781  Q
    |||||    
T  2849167 acttt 2849163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 41462456 - 41462355
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||| ||  ||||||||||||||  ||| |||||||||| || || ||| | |||||||||||||| ||||    
T  41462456 atagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccatcgggtcacttgttgaaccgcatgactgaa 41462357  T
Q  687 tc 688  Q
    ||    
T  41462356 tc 41462355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 586 - 654
Target Start/End: Complemental strand, 11412595 - 11412527
Alignment:
Q  586 aatagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    |||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| ||||| |||||||||    
T  11412595 aatagttttaaaactcggctcggtcatcgactcggcaagggtattgggtcactgggtcattggtcgaac 11412527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 587 - 654
Target Start/End: Complemental strand, 10259296 - 10259229
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||| |||||||||||    
T  10259296 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggttaatggtcgaac 10259229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 587 - 762
Target Start/End: Original strand, 29727738 - 29727923
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| || |||||||||||| ||||||| | ||| |||||| |||| | ||  ||| | |||||||||||||| ||||    
T  29727738 atagttttaaaactcggctcggtcatcgattcggcaggggtattgggtcattgggttaatggttgaaccactgagtcactagttgaaccgcatgactgaa 29727837  T
Q  687 t----------cagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaa 762  Q
    |          | ||| |||| |||| || ||||||||| |||||| ||||| ||||| ||||||||  ||||||||| |||||||    
T  29727838 tcggattaaaccggataactcagttagatgactcggtcttaagattaaatttttatagctatttaactagattaaatcgaattgaa 29727923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 588 - 755
Target Start/End: Original strand, 5123764 - 5123933
Alignment:
Q  588 tagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa- 686  Q
    |||||||||||||| | |||| |||||||||||||||||||||| |||||| |||        |||| ||||  |||||||||||||||||||| ||||     
T  5123764 tagttttaaaactcggttcggccattgactcggcaggggtactgagtcactgggt--------gaaccattgagtcattggttgaaccgcatgaatgaac 5123855  T
Q  687 ---------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatca 755  Q
             || ||||||||||||| |||||||| |||  ||||| ||||||||||| |||||||| ||||| |||||    
T  5123856 tggatcaactcggatgactcggttagataactcgctcttgagattaaatttatataggtatttaactggattgaatca 5123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 42217263 - 42217162
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| ||||||| |  |||||||||||| |  || ||||||||||| | ||  ||| |||||||||||||||| ||||    
T  42217263 atagttttaaaactcggctcggtcatcgactcggtaaaggtactgggtcattgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 42217164  T
Q  687 tc 688  Q
    ||    
T  42217163 tc 42217162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 654
Target Start/End: Complemental strand, 11676332 - 11676266
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||  |||||||||| |||||||| |||||||||||||| | |||||||||||||||    
T  11676332 atagttttaaaacttggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaac 11676266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 11574995 - 11575096
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  |||| |||| |||||||||  |||||||||||| |   || |||||||||| || || |||||||||||||||| ||| ||||    
T  11574995 atagttttaaaactcgactcgatcatcgactcggcataggtactgggtcattgaatcgatggtcgaaccatcgggtcattggttgaaccgcgtgactgaa 11575094  T
Q  687 tc 688  Q
    ||    
T  11575095 tc 11575096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 690 - 751
Target Start/End: Original strand, 26725658 - 26725719
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  26725658 gatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 26725719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 690 - 754
Target Start/End: Complemental strand, 52404339 - 52404275
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
    ||||||||||||| ||||||||||||  ||||| ||||||||||| ||||||| || ||||||||    
T  52404339 gatgactcggttagataactcggtcttgagattaaatttatatagctatttaatcgtattaaatc 52404275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 690 - 781
Target Start/End: Complemental strand, 10259203 - 10259112
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||||||||||| |||| ||||||   ||||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | |||||||||    
T  10259203 gatgactcggttagataattcggtccttagattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtcacttt 10259112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 587 - 681
Target Start/End: Complemental strand, 45104213 - 45104119
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    ||||||||||||||| |  |||| || || |||| | | ||||||||||||| ||||||||||||||| | ||||||| |||| |||| ||||||    
T  45104213 atagttttaaaactcggaccggtgatcgaatcggtaagagtactgggtcactgggtcaatggtcgaaccactggatcactggtcgaactgcatga 45104119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 751
Target Start/End: Original strand, 44832521 - 44832578
Alignment:
Q  694 actcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    ||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  44832521 actcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 44832578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 587 - 679
Target Start/End: Original strand, 11018706 - 11018797
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    ||||||||||||||| |||||||||| |||||||  |||||||||||||||| | |||||  || ||| | ||  |||||||| |||||||||    
T  11018706 atagttttaaaactcggctcggtcatcgactcgg-tggggtactgggtcactggatcaataatcaaaccagtgagtcattggtcgaaccgcat 11018797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 624 - 715
Target Start/End: Complemental strand, 6101985 - 6101894
Alignment:
Q  624 gggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatcagatgactcggttaaataactcggtct 715  Q
    ||||||||||||| |  |||| ||||||||| ||||  ||| |||| ||||||||||| |||||| ||||||||| ||| |  |||||||||    
T  6101985 gggtactgggtcaatgagtcattggtcgaaccattgagtcactggtcgaaccgcatgactgaatcggatgactcgattatacgactcggtct 6101894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 690 - 781
Target Start/End: Complemental strand, 11676249 - 11676158
Alignment:
Q  690 gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtcacttt 781  Q
    ||||||||| ||| |||||||||||   | ||| ||||||||||| |||||||||||||||| ||  |||||||  |||| | |||||||||    
T  11676249 gatgactcgtttagataactcggtccttaaattaaatttatatagttatttaaccggattaactcggattgaatcggtgactcggtcacttt 11676158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 754
Target Start/End: Original strand, 45158571 - 45158638
Alignment:
Q  687 tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
    ||||||| |||||||| ||||||||||||  ||||| ||||||||||  ||||||| ||||| |||||    
T  45158571 tcagatggctcggttagataactcggtcttgagattaaatttatataactatttaatcggataaaatc 45158638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 15100605 - 15100706
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||| |||| ||||||  | || || ||||||| | ||| ||||||||||| | ||  ||| || ||||||||||||| ||||    
T  15100605 atagttttaaaactcggctcgatcatcgactcgataaggatattgggtcattgggttaatggtcgaaccactgagtcactgattgaaccgcatgactgaa 15100704  T
Q  687 tc 688  Q
    ||    
T  15100705 tc 15100706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 21603698 - 21603597
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||  | ||| |||||| || |||| | ||  ||||||||||||||||| |||| |||| ||||| ||| ||||||||| | |||| ||||    
T  21603698 atagttttaaaaaccggcttggtcatcgattcggtaaggtcactgggtcactaggtcattggttgaaccattgggtcactggttgaacagtatgactgaa 21603599  T
Q  687 tc 688  Q
    ||    
T  21603598 tc 21603597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 591 - 692
Target Start/End: Complemental strand, 31489004 - 31488903
Alignment:
Q  591 ttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatcag 690  Q
    |||||||| || ||||| |||| |||||   || ||||||| ||| || | ||||||||||||| |||| || ||||||||||| |||||| | ||||||    
T  31489004 ttttaaaaatcggctcgatcatcgactcaatagaggtactgagtccctggatcaatggtcgaaccattgaattattggttgaactgcatgactaaatcag 31488905  T
Q  691 at 692  Q
    ||    
T  31488904 at 31488903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 688
Target Start/End: Complemental strand, 33987321 - 33987220
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  || ||||||||||||||  ||| |||||| ||| |  ||||||||| |||  | ||  |||||||| ||||||||||| ||||    
T  33987321 atagttttaaaactcgacttggtcattgactcggtggggttactggatcaatgagtcaatggttgaatcactgagtcattggtcgaaccgcatgactgaa 33987222  T
Q  687 tc 688  Q
    ||    
T  33987221 tc 33987220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 1e-28; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 24068299 - 24068095
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||| ||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  24068299 atagttttaaaactcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 24068200  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| ||||||||||    ||||| ||||||||||| |||||||||||||||| ||  |||||||| |||| | ||||    
T  24068199 tcggaaccactcggatgactcggttagataactcggtgcttagattaaatttatatagttatttaaccggattaactcggattgaattggtgactcggtc 24068100  T
Q  777 acttt 781  Q
    |||||    
T  24068099 acttt 24068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 23595692 - 23595793
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||||||||| |||  |||||||||| | ||  |||||||||||||||||||||| ||    
T  23595692 atagttttaaaactcggctcggtgatcgactcggcaggggtactgggtcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgattaaa 23595791  T
Q  687 tc 688  Q
    ||    
T  23595792 tc 23595793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 587 - 754
Target Start/End: Original strand, 30269594 - 30269771
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| |  || ||||||||||| | ||  || ||||| ||||||||||| ||||    
T  30269594 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagttaatggtcgaaccactgagtcgttggtcgaaccgcatgactgaa 30269693  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatc 754  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| |||||||||||||| ||||    
T  30269694 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattgaatc 30269771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 21289552 - 21289755
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||| | |||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  21289552 atagttttcatactcggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactgaa 21289650  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||| |||||||||||| ||  |||||||  |||| | ||||    
T  21289651 ccggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatataaccggattaactcggattgaatcggtgactcggtc 21289750  T
Q  777 acttt 781  Q
    |||||    
T  21289751 acttt 21289755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 588 - 681
Target Start/End: Complemental strand, 31513474 - 31513381
Alignment:
Q  588 tagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatga 681  Q
    |||||||||||||| |||||| ||||||||||| |||||||||| |||| | |||||||||| |||| ||||| |||||||| |||||||||||    
T  31513474 tagttttaaaactcggctcggacattgactcggaaggggtactgagtcaatgggtcaatggttgaaccattgggtcattggtcgaaccgcatga 31513381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 587 - 769
Target Start/End: Original strand, 8464282 - 8464473
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || ||||||||||   ||||||||  |||||||||||||  || ||||||||||| | |  ||||||||| ||||||||||| ||||    
T  8464282 atagttttaaaattcggctcggtcatcagctcggcagatgtactgggtcactgagttaatggtcgaaccactaaatcattggtcgaaccgcatgactgaa 8464381  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtga 769  Q
              || |||||||| |||| ||||||||||||  ||||| ||||||||||| ||||||||| ||||||||| |||| |||| ||||    
T  8464382 ccagatcaattcggatgactctgttagataactcggtcttgagattaaatttatatagctatttaacc-gattaaatcgaatttaattggtga 8464473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 587 - 679
Target Start/End: Original strand, 6817291 - 6817383
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcat 679  Q
    ||||||||||||||| |||||||||| ||||||| | ||||||||||||| | ||| ||||||||||| | ||  ||| ||||||||||||||    
T  6817291 atagttttaaaactcggctcggtcatcgactcggtaagggtactgggtcattgggttaatggtcgaaccactgagtcactggttgaaccgcat 6817383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 624 - 715
Target Start/End: Original strand, 11465359 - 11465450
Alignment:
Q  624 gggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaatcagatgactcggttaaataactcggtct 715  Q
    ||||||||||||| |  |||| ||||||||| ||||||||| |||| ||||||||||| |||||| ||||||||||||| |  |||||||||    
T  11465359 gggtactgggtcaatgagtcattggtcgaaccattggatcactggtcgaaccgcatgactgaatcggatgactcggttatacgactcggtct 11465450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 587 - 636
Target Start/End: Complemental strand, 29419862 - 29419813
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtca 636  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  29419862 atagttttaaaactcggctcggtcatcgactcggcaggggtactgggtca 29419813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 30426319 - 30426424
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||| || |||||||||| |||||||   ||||||||| ||| || || ||||||||||| | |   ||| |||||||||||||||||||||    
T  30426319 atagttttaaaattcggctcggtcatcgactcggacagggtactggatcaataagttaatggtcgaaccactaagtcactggttgaaccgcatgattgaa 30426418  T
Q  687 tcagat 692  Q
    ||||||    
T  30426419 tcagat 30426424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 587 - 636
Target Start/End: Complemental strand, 34780024 - 34779975
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtca 636  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  34780024 atagttttaaaactcggctctgtcattgactcggcgggggtactgggtca 34779975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 691 - 751
Target Start/End: Original strand, 13630310 - 13630370
Alignment:
Q  691 atgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
    |||||||||||| ||||||||||||  ||||| ||||||||||  ||||||||||||||||    
T  13630310 atgactcggttagataactcggtctttagattaaatttatataattatttaaccggattaa 13630370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 587 - 781
Target Start/End: Complemental strand, 22351346 - 22351150
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| ||| |||||        ||||||||||||||| | ||  |||||||| ||||||||||| | ||    
T  22351346 atagttttaaaactcggctcggtcatcgactcggcggggatactg--------ggtcaatggtcgaaccactgagtcattggtcgaaccgcatgacttaa 22351255  T
Q  687 tca----------gatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
    |||          ||||||||||||| ||||||| |||   ||||| ||||||||||| |||||||||||| ||| ||  |||||||  |||| | ||||    
T  22351254 tcagaaccactcggatgactcggttagataactcagtccttagattaaatttatatagttatttaaccggaataactcggattgaatcggtgactcggtc 22351155  T

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Target: scaffold0231 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 587 - 751
Target Start/End: Complemental strand, 11135 - 10961
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| | ||    
T  11135 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactaaa 11036  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  11035 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 10961  T

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Target: scaffold0070 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 587 - 751
Target Start/End: Original strand, 12722 - 12896
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    |||||||||||||||  ||||||||| |||||||| |||||||||||||| | ||||||||||||||| | ||  |||||||| ||||||||||| ||||    
T  12722 atagttttaaaactcgactcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 12821  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaa 751  Q
              || ||||||||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  12822 tcggaaccactcggatgactcggttagataactcggtccttagattaaatttatatagttatttaaccggattaa 12896  T

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Target: scaffold0043 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 587 - 688
Target Start/End: Original strand, 64346 - 64447
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||| ||  ||||||||||||||  ||| |||||||||| ||||| ||| |||||||||||||||| ||||    
T  64346 atagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactgaa 64445  T
Q  687 tc 688  Q
    ||    
T  64446 tc 64447  T

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Target: scaffold0116 (Bit Score: 50; Significance: 5e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 712
Target Start/End: Original strand, 7840 - 7965
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||||  ||||||| |||| | ||| ||||||||||| | ||  || ||||||||||||||||| ||||    
T  7840 atagttttaaaactcggctcggtcatcgactcggcaaaggtactgagtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgactgaa 7939  T
Q  687 tcagatgactcggttaaataactcgg 712  Q
     | ||| ||||||||| || ||||||    
T  7940 ccggataactcggttagatgactcgg 7965  T

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Target: scaffold0036 (Bit Score: 50; Significance: 5e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 587 - 781
Target Start/End: Original strand, 51910 - 52114
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaactattggatcattggttgaaccgcatgattgaa 686  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||| |  |||||||||||||| |  |  ||||||||  |||||||||| ||||    
T  51910 atagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccacagagtcattggtcaaaccgcatgactgaa 52009  T
Q  687 ----------tcagatgactcggttaaataactcggtctaaagattcaatttatatagatatttaaccggattaaatcaaattgaattagtgatttggtc 776  Q
              || ||||||||||||| |||| ||||||   ||||| ||||| ||| |||||||||||||||||| ||  |||||||  |||| | ||||    
T  52010 ccggaaccactcggatgactcggttagataattcggtccttagattaaatttgtattgatatttaaccggattaactcggattgaatcggtgactcggtc 52109  T
Q  777 acttt 781  Q
    |||||    
T  52110 acttt 52114  T

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Target: scaffold0712 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 654
Target Start/End: Complemental strand, 5029 - 4963
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||| |||||||||| ||||||| | ||||  ||||||||| ||| |||||||||||    
T  5029 atagttttaaaactcggctcggtcatcgactcggta-gggtgttgggtcactcggttaatggtcgaac 4963  T

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Target: scaffold0709 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 587 - 654
Target Start/End: Complemental strand, 5049 - 4983
Alignment:
Q  587 atagttttaaaactcagctcggtcattgactcggcaggggtactgggtcactaggtcaatggtcgaac 654  Q
    ||||||||||||||| |||||||||| ||||||| | ||||  ||||||||| ||| |||||||||||    
T  5049 atagttttaaaactcggctcggtcatcgactcggta-gggtgttgggtcactcggttaatggtcgaac 4983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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