View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5418_high_87 (Length: 255)
Name: NF5418_high_87
Description: NF5418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5418_high_87 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 37528719 - 37528474
Alignment:
| Q |
1 |
gaagtgtctttatctttttctagtgtctcttactgcgatgtccttgttaggtggtttaagcatgcatccattggcttagcaatagttggttcgtgtctaa |
100 |
Q |
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| T |
37528719 |
gaagtgtctttatctttttctagtgtctcttactgcgatgtccttgttaggtggtttaagcatgcatccattggcttagcaatagttggttcgtgtctaa |
37528620 |
T |
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| Q |
101 |
tagctaaccgtactattcaatacatcttgctaaggtggcgacaatgtaaactgctaaaaaggtacacgatgctgaacattcttcttattaatggttaaaa |
200 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
37528619 |
tagctaaccgtactattcaatacatcttgttaaggtggcgacaatgtaaactgctaaaaaggtacacaatgctgaacattcttcttattaatggttaaaa |
37528520 |
T |
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| Q |
201 |
accacatactatattgaaagacgttgaaccggaaaaagttacacaatgttgttct |
255 |
Q |
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|||||||||||| ||||||||| |||||||||| ||||||||||||| |
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| T |
37528519 |
accacatactat---------cgttgaaccagaaaaagttatacaatgttgttct |
37528474 |
T |
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