View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5418_low_46 (Length: 373)

Name: NF5418_low_46
Description: NF5418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5418_low_46
NF5418_low_46
[»] chr6 (14 HSPs)
chr6 (115-365)||(23282774-23283024)
chr6 (115-298)||(23289184-23289368)
chr6 (1-61)||(23283078-23283138)
chr6 (297-365)||(7847277-7847345)
chr6 (297-334)||(7772176-7772213)
chr6 (295-334)||(2090656-2090695)
chr6 (297-334)||(402621-402658)
chr6 (297-334)||(13901641-13901678)
chr6 (297-334)||(15498629-15498666)
chr6 (297-334)||(23604460-23604497)
chr6 (297-334)||(25045643-25045680)
chr6 (297-334)||(34915543-34915580)
chr6 (294-330)||(2364406-2364442)
chr6 (300-332)||(2665727-2665759)
[»] scaffold0161 (1 HSPs)
scaffold0161 (296-368)||(3437-3509)
[»] chr1 (15 HSPs)
chr1 (297-368)||(25509209-25509280)
chr1 (297-334)||(18237094-18237131)
chr1 (297-365)||(1427199-1427268)
chr1 (296-364)||(26768385-26768453)
chr1 (297-365)||(50007975-50008043)
chr1 (297-331)||(29437857-29437891)
chr1 (296-334)||(33336800-33336838)
chr1 (296-329)||(6129917-6129950)
chr1 (297-334)||(7763749-7763786)
chr1 (297-334)||(27037269-27037306)
chr1 (297-334)||(42276161-42276198)
chr1 (297-334)||(43456621-43456658)
chr1 (301-334)||(45285810-45285843)
chr1 (297-334)||(47754017-47754054)
chr1 (297-329)||(45943978-45944010)
[»] chr8 (19 HSPs)
chr8 (289-334)||(2152240-2152285)
chr8 (297-334)||(5774048-5774085)
chr8 (296-334)||(18641380-18641418)
chr8 (296-334)||(31619248-31619286)
chr8 (297-331)||(35179600-35179634)
chr8 (296-334)||(36177103-36177141)
chr8 (296-334)||(37023284-37023322)
chr8 (297-330)||(2151980-2152013)
chr8 (297-334)||(5162304-5162341)
chr8 (295-332)||(6050557-6050594)
chr8 (297-334)||(8566202-8566239)
chr8 (297-334)||(12802611-12802648)
chr8 (297-334)||(17069844-17069881)
chr8 (297-334)||(17578392-17578429)
chr8 (297-330)||(23719281-23719314)
chr8 (297-334)||(33980465-33980502)
chr8 (293-330)||(35504315-35504352)
chr8 (297-334)||(43654203-43654240)
chr8 (297-334)||(44748463-44748500)
[»] chr7 (12 HSPs)
chr7 (297-334)||(12930318-12930355)
chr7 (297-334)||(18751982-18752019)
chr7 (297-365)||(46148431-46148500)
chr7 (297-365)||(25247659-25247727)
chr7 (297-331)||(7607635-7607669)
chr7 (297-331)||(9682602-9682636)
chr7 (297-368)||(32118129-32118200)
chr7 (297-368)||(33381539-33381610)
chr7 (297-334)||(2290016-2290053)
chr7 (297-334)||(34012517-34012554)
chr7 (297-334)||(34979077-34979114)
chr7 (297-330)||(35888574-35888607)
[»] chr3 (17 HSPs)
chr3 (297-334)||(8503505-8503542)
chr3 (291-331)||(36584704-36584744)
chr3 (296-331)||(4564236-4564271)
chr3 (296-331)||(20621687-20621722)
chr3 (297-365)||(49383344-49383412)
chr3 (296-334)||(47008502-47008540)
chr3 (297-334)||(1450242-1450279)
chr3 (297-334)||(4759351-4759388)
chr3 (297-334)||(8321925-8321962)
chr3 (297-334)||(24087335-24087372)
chr3 (297-334)||(26221288-26221325)
chr3 (297-334)||(30819878-30819915)
chr3 (297-334)||(35572454-35572491)
chr3 (297-334)||(41392880-41392917)
chr3 (297-334)||(46845492-46845529)
chr3 (297-334)||(49383833-49383870)
chr3 (290-334)||(14428603-14428647)
[»] chr2 (12 HSPs)
chr2 (297-334)||(11865289-11865326)
chr2 (297-334)||(26334845-26334882)
chr2 (296-331)||(40789091-40789126)
chr2 (296-334)||(8912874-8912912)
chr2 (297-331)||(13598522-13598556)
chr2 (292-334)||(16108475-16108517)
chr2 (297-334)||(2060316-2060353)
chr2 (297-330)||(6028606-6028639)
chr2 (297-334)||(7116299-7116336)
chr2 (297-334)||(26322293-26322330)
chr2 (297-334)||(28566151-28566188)
chr2 (297-334)||(38121511-38121548)
[»] chr4 (20 HSPs)
chr4 (297-366)||(20455149-20455218)
chr4 (290-334)||(49373693-49373737)
chr4 (297-331)||(13548980-13549014)
chr4 (296-334)||(15241479-15241517)
chr4 (297-331)||(30050087-30050121)
chr4 (296-334)||(53564356-53564394)
chr4 (297-334)||(4415965-4416002)
chr4 (297-334)||(25124246-25124283)
chr4 (297-334)||(28501386-28501423)
chr4 (297-334)||(29520164-29520201)
chr4 (297-334)||(31937076-31937113)
chr4 (297-334)||(46949992-46950029)
chr4 (297-334)||(49793091-49793128)
chr4 (296-333)||(55563128-55563165)
chr4 (297-334)||(56432518-56432555)
chr4 (302-334)||(4549889-4549921)
chr4 (297-333)||(6462691-6462727)
chr4 (295-331)||(23623899-23623935)
chr4 (297-333)||(32899219-32899255)
chr4 (297-333)||(37639888-37639924)
[»] scaffold0674 (1 HSPs)
scaffold0674 (296-334)||(5150-5188)
[»] scaffold0604 (1 HSPs)
scaffold0604 (297-368)||(3748-3819)
[»] scaffold0549 (1 HSPs)
scaffold0549 (296-334)||(10182-10220)
[»] scaffold0240 (1 HSPs)
scaffold0240 (296-334)||(18496-18534)
[»] scaffold0107 (1 HSPs)
scaffold0107 (296-334)||(48653-48691)
[»] chr5 (10 HSPs)
chr5 (296-334)||(23286474-23286512)
chr5 (297-331)||(24857556-24857590)
chr5 (297-331)||(39971014-39971048)
chr5 (288-334)||(40004409-40004455)
chr5 (296-334)||(43060411-43060449)
chr5 (297-334)||(3028013-3028050)
chr5 (297-334)||(8949812-8949849)
chr5 (297-334)||(15190815-15190852)
chr5 (296-333)||(19571940-19571977)
chr5 (297-334)||(23260138-23260175)
[»] scaffold0457 (1 HSPs)
scaffold0457 (297-334)||(4663-4700)
[»] scaffold0074 (1 HSPs)
scaffold0074 (300-332)||(55930-55962)


Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 115 - 365
Target Start/End: Complemental strand, 23283024 - 23282774
Alignment:
Q  115 acaccgaagtccacactcgatgatatacggtgttgagacgtggtgtcagaaattgtgtttaaatgacacaactgcaatatatctatatacaacaagttgg 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23283024 acaccgaagtccacactcgatgatatacggtgttgagacgtggtgtcagaaattgtgtttaaattacacaactgcaatatatctatatacaacaagttgg 23282925  T
Q  215 atttcaaaaggatttttaatttgtagcttatatgtgaatataatcacgaatcacgaataaagtgcatcttatctcttttatttactacctccgtccctaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  23282924 atttcaaaaggatttttaatttgtagcttatatgtgaatataatcactaatcaggcataaagtgcatcttatctcttttatttactacctccgtccctaa 23282825  T
Q  315 atataagactcttttgagaannnnnnngtctcttattataagacccctttg 365  Q
    ||||||||| ||||||||||       ||||||||||||||||||||||||    
T  23282824 atataagacccttttgagaatttttttgtctcttattataagacccctttg 23282774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 115 - 298
Target Start/End: Complemental strand, 23289368 - 23289184
Alignment:
Q  115 acaccgaagtccacactcgatgatatacggtgttgagacgtggtgtcagaaattgtgtttaaatgacacaactgcaatatatctatatacaacaagttgg 214  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||    
T  23289368 acaccgaagtccacactcgatgatatttggtgttgagacgtggtgtcagaaattgtgtttaaattacacaaatgcaatatatctatatactataagttgg 23289269  T
Q  215 -atttcaaaaggatttttaatttgtagcttatatgtgaatataatcacgaatcacgaataaagtgcatcttatctcttttattta 298  Q
     |||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||  |||||||||||    
T  23289268 aatttcaaaaggatttttaatttgtagcttatatgtgaatagaatcactaatcaggcataaagtgcatcttacttcttttattta 23289184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23283138 - 23283078
Alignment:
Q  1 ttatgtagggaaattttttgtttgctcagtttaggacacagttaccgtatatttatacgga 61  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  23283138 ttatgtagggaaatgttttgtttgcacagtttaggacacaggtaccgtatatttatacgga 23283078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 7847345 - 7847277
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttg 365  Q
    ||||||||||||||||||||||||||| ||||||||||       |||||||||||||| |||||||||    
T  7847345 tactacctccgtccctaaatataagacccttttgagaatttttttgtctcttattataatacccctttg 7847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 7772176 - 7772213
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7772176 tactacctccgtccctaattataagactcttttgagaa 7772213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 2090656 - 2090695
Alignment:
Q  295 tttactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  2090656 tttactacctccgtccctaattataagacccttttgagaa 2090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 402658 - 402621
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  402658 tactacctccgtccctaattataagacccttttgagaa 402621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 13901641 - 13901678
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  13901641 tactacctccgtccctaattataagacccttttgagaa 13901678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 15498629 - 15498666
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  15498629 tactacctccgtccctaattataagacccttttgagaa 15498666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 23604460 - 23604497
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  23604460 tactacctccgtccctaattataagacccttttgagaa 23604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 25045680 - 25045643
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  25045680 tactacctccgtccctaattataagacccttttgagaa 25045643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 34915580 - 34915543
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  34915580 tactacctccgtccctaattataagacccttttgagaa 34915543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 2364406 - 2364442
Alignment:
Q  294 atttactacctccgtccctaaatataagactcttttg 330  Q
    |||||||||||||||||||||||||| || |||||||    
T  2364406 atttactacctccgtccctaaatataggagtcttttg 2364442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 2665759 - 2665727
Alignment:
Q  300 tacctccgtccctaaatataagactcttttgag 332  Q
    ||||||||||||||||||||||||| |||||||    
T  2665759 tacctccgtccctaaatataagacttttttgag 2665727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 368
Target Start/End: Original strand, 3437 - 3509
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttgcta 368  Q
    ||||||||||||||||||| |||||||| ||||||||||       ||| ||| |||||||||||||||||||    
T  3437 ttactacctccgtccctaattataagacccttttgagaatttttttgtccctttttataagacccctttgcta 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 25509209 - 25509280
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttgcta 368  Q
    |||||||||||||||||| |||||||| ||||||||||       ||| ||| |||||||||||||||||||    
T  25509209 tactacctccgtccctaattataagacccttttgagaatttttttgtccctttttataagacccctttgcta 25509280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 18237094 - 18237131
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18237094 tactacctccgtccctaattataagactcttttgagaa 18237131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 1427199 - 1427268
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa-nnnnnnngtctcttattataagacccctttg 365  Q
    |||||||||||||| |||||||||||| ||||||||||        ||||||||||||||||||||||||    
T  1427199 tactacctccgtccttaaatataagacccttttgagaattttttttgtctcttattataagacccctttg 1427268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 26768385 - 26768453
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagaccccttt 364  Q
    ||||||||| |||||||||||||||||| ||||||||||       ||||||| |||||||| ||||||    
T  26768385 ttactaccttcgtccctaaatataagacccttttgagaatttttttgtctctttttataagatcccttt 26768453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 50007975 - 50008043
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttg 365  Q
    |||| |||| |||||||| |||||||||||||||||||       ||||||| ||||||||||||||||    
T  50007975 tactccctctgtccctaattataagactcttttgagaatttttttgtctctttttataagacccctttg 50008043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 29437891 - 29437857
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  29437891 tactacctccgtccctaattataagactcttttga 29437857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 33336800 - 33336838
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  33336800 ttactacctccgtctctaaatataagattcttttgagaa 33336838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 6129917 - 6129950
Alignment:
Q  296 ttactacctccgtccctaaatataagactctttt 329  Q
    ||||||||||||||||||| ||||||||||||||    
T  6129917 ttactacctccgtccctaattataagactctttt 6129950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 7763786 - 7763749
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  7763786 tactacctccgtccctaattataagacccttttgagaa 7763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 27037269 - 27037306
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  27037269 tactacctccgtccctaattataagacccttttgagaa 27037306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 42276198 - 42276161
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  42276198 tactacctccgtccctaattataagacccttttgagaa 42276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 43456658 - 43456621
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  43456658 tactacctccgtccctaattataagacccttttgagaa 43456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 45285843 - 45285810
Alignment:
Q  301 acctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||| |||||||||||||||||||    
T  45285843 acctccgtccctaattataagactcttttgagaa 45285810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 47754017 - 47754054
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  47754017 tactacctccgtccctaattataaaactcttttgagaa 47754054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 45944010 - 45943978
Alignment:
Q  297 tactacctccgtccctaaatataagactctttt 329  Q
    |||||||||||||||||| ||||||||||||||    
T  45944010 tactacctccgtccctaattataagactctttt 45943978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 2152285 - 2152240
Alignment:
Q  289 cttttatttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  2152285 cttttatatactacctccgtccctaattataagacccttttgagaa 2152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 5774048 - 5774085
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||||||||||||||    
T  5774048 tactacctccgtccctaattataagactcttttgagaa 5774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 18641418 - 18641380
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  18641418 ttactacctccgtccctaattataagacccttttgagaa 18641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 31619286 - 31619248
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  31619286 ttactacctccgtccctaaatataagaccattttgagaa 31619248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 35179600 - 35179634
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  35179600 tactacctccgtccctaattataagactcttttga 35179634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 36177141 - 36177103
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  36177141 ttactccctccgtccctaattataagactcttttgagaa 36177103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 37023322 - 37023284
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  37023322 ttactgcctccgtccctaattataagactcttttgagaa 37023284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 2151980 - 2152013
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttg 330  Q
    ||||||||||||||||| ||||||||||||||||    
T  2151980 tactacctccgtccctatatataagactcttttg 2152013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 5162304 - 5162341
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  5162304 tactacctccgtccctaattataagacccttttgagaa 5162341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 6050594 - 6050557
Alignment:
Q  295 tttactacctccgtccctaaatataagactcttttgag 332  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  6050594 tttactacctccgtccctaattataagacccttttgag 6050557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 8566202 - 8566239
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  8566202 tactacctccgttcctaattataagactcttttgagaa 8566239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 12802611 - 12802648
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  12802611 tactacctccgtccctaattataagacccttttgagaa 12802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 17069881 - 17069844
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  17069881 tactacctccgtccctaattataagacccttttgagaa 17069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 17578392 - 17578429
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  17578392 tactacctccgtccctaattataagacccttttgagaa 17578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 23719281 - 23719314
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttg 330  Q
    |||||||||||||| |||||||||||||||||||    
T  23719281 tactacctccgtccataaatataagactcttttg 23719314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 33980465 - 33980502
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  33980465 tactacctccgtccctaattataagacttttttgagaa 33980502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 35504315 - 35504352
Alignment:
Q  293 tatttactacctccgtccctaaatataagactcttttg 330  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  35504315 tatttactccctccgtccctatatataagactcttttg 35504352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 43654240 - 43654203
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  43654240 tactccctccgtccctaattataagactcttttgagaa 43654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 44748500 - 44748463
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  44748500 tactacctccgtccctaattataagattcttttgagaa 44748463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 12930318 - 12930355
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||||||||||||||    
T  12930318 tactacctccgtccctaattataagactcttttgagaa 12930355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 18752019 - 18751982
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18752019 tactacctccgtccctaattataagactcttttgagaa 18751982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 46148431 - 46148500
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa-nnnnnnngtctcttattataagacccctttg 365  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||    
T  46148431 tactacctccgtccctaaatataagacctttttgagaattttttttgtctcttattataagacccctttg 46148500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 25247727 - 25247659
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttg 365  Q
    |||| ||||||||||||| |||||||||||||||||||       ||| ||| ||||||||||||||||    
T  25247727 tactccctccgtccctaattataagactcttttgagaatttttttgtccctttttataagacccctttg 25247659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 7607669 - 7607635
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    ||||||||||||||||||||||||||| |||||||    
T  7607669 tactacctccgtccctaaatataagacccttttga 7607635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 9682602 - 9682636
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  9682602 tactacctccgtccctaattataagactcttttga 9682636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 32118200 - 32118129
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttgcta 368  Q
    |||||||||||||||||| |||||||| ||||||| ||       ||| ||| |||||||||||||||||||    
T  32118200 tactacctccgtccctaattataagacccttttgaaaaaaaaattgtccctttttataagacccctttgcta 32118129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 33381610 - 33381539
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttgcta 368  Q
    |||||||||||||||||| |||||||| |||||||||        ||| ||| |||||||||||||||||||    
T  33381610 tactacctccgtccctaattataagacccttttgagattttttttgtccctttttataagacccctttgcta 33381539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 2290053 - 2290016
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  2290053 tactacctccgtccctaattataagacccttttgagaa 2290016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 34012554 - 34012517
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  34012554 tactacctccgtccctaattataagacccttttgagaa 34012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 34979114 - 34979077
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  34979114 tactccctccgtccctaattataagactcttttgagaa 34979077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 35888607 - 35888574
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttg 330  Q
    |||||||||||||||||||||||||| |||||||    
T  35888607 tactacctccgtccctaaatataagagtcttttg 35888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 8503542 - 8503505
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8503542 tactacctccgtccctaaatataagacccttttgagaa 8503505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 36584704 - 36584744
Alignment:
Q  291 tttatttactacctccgtccctaaatataagactcttttga 331  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  36584704 tttatttactacctctgtccctaattataagactcttttga 36584744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 4564236 - 4564271
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttga 331  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4564236 ttactacctccgtccctaattataagactcttttga 4564271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 20621722 - 20621687
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttga 331  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20621722 ttactacctccgtccctaattataagactcttttga 20621687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 49383344 - 49383412
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttg 365  Q
    |||||||||||||||||| |||||||||||||||| ||       ||| ||| ||||||||||||||||    
T  49383344 tactacctccgtccctaattataagactcttttgaaaaaaaaattgtccctttttataagacccctttg 49383412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 47008540 - 47008502
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  47008540 ttactacctccgtccctaattataagacacttttgagaa 47008502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 1450242 - 1450279
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  1450242 tactaccttcgtccctaattataagactcttttgagaa 1450279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 4759388 - 4759351
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  4759388 tactacctccgtccctaattataagacccttttgagaa 4759351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 8321925 - 8321962
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  8321925 tactacctccgtccctaattataagacccttttgagaa 8321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 24087372 - 24087335
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  24087372 tactacctccgtccctaattataagacccttttgagaa 24087335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 26221288 - 26221325
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  26221288 tactccctccgtccctaattataagactcttttgagaa 26221325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 30819878 - 30819915
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  30819878 tactacctccgtccctaactataagacccttttgagaa 30819915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 35572491 - 35572454
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  35572491 tactacctccgtccttaagtataagactcttttgagaa 35572454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 41392917 - 41392880
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  41392917 tactacctccgtccctaattataagacccttttgagaa 41392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 46845529 - 46845492
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  46845529 tactacctccgtccctaattataagacccttttgagaa 46845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 49383870 - 49383833
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  49383870 tactacctccgtctctaattataagactcttttgagaa 49383833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 14428603 - 14428647
Alignment:
Q  290 ttttatttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||| ||||| ||||||||||||| |||||||| ||||||||||    
T  14428603 ttttaattactccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 11865326 - 11865289
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11865326 tactacctccgtccctaattataagactcttttgagaa 11865289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 26334882 - 26334845
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||||||||||||||    
T  26334882 tactacctccgtccctaattataagactcttttgagaa 26334845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 40789126 - 40789091
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttga 331  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40789126 ttactacctccgtccctaattataagactcttttga 40789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 8912912 - 8912874
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  8912912 ttactacctccgtccctaattataagacccttttgagaa 8912874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 13598522 - 13598556
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    ||||||||||||||||||||||||||| |||||||    
T  13598522 tactacctccgtccctaaatataagacccttttga 13598556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 16108517 - 16108475
Alignment:
Q  292 ttatttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||    
T  16108517 ttatttactccctccgtccctaattataagattcttttgagaa 16108475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 2060316 - 2060353
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  2060316 tactacctccgtccctaattataagacccttttgagaa 2060353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 6028639 - 6028606
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttg 330  Q
    |||||||||||||||||||||||||| |||||||    
T  6028639 tactacctccgtccctaaatataagagtcttttg 6028606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 7116336 - 7116299
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  7116336 tactacctccgtccctaattataagacccttttgagaa 7116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 26322330 - 26322293
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  26322330 tactacctccgtccctaattataagacccttttgagaa 26322293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 28566151 - 28566188
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  28566151 tactacctccgtccctaattataagacccttttgagaa 28566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 38121548 - 38121511
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  38121548 tactacctccgtccctaataataagactcttttgagaa 38121511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 20455218 - 20455149
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttgc 366  Q
    |||||||||||||||||| |||||||| ||||||||||       ||| ||| |||||||||||||||||    
T  20455218 tactacctccgtccctaattataagacccttttgagaatttttttgtccctttttataagacccctttgc 20455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 49373737 - 49373693
Alignment:
Q  290 ttttatttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||    
T  49373737 ttttaattactacctccgtccctaattataagacccttttgagaa 49373693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 13548980 - 13549014
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  13548980 tactacctccgtccctaattataagactcttttga 13549014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 15241479 - 15241517
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  15241479 ttactccctccgtccctaattataagactcttttgagaa 15241517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 30050121 - 30050087
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  30050121 tactacctccgtccctaattataagactcttttga 30050087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 53564394 - 53564356
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  53564394 ttactacctccgtccctaattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 4415965 - 4416002
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  4415965 tactacctccgtccctaattataagacccttttgagaa 4416002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 25124283 - 25124246
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  25124283 tactacctccgtccctaattataagacccttttgagaa 25124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 28501423 - 28501386
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  28501423 tactacctccgtccctaattataagacccttttgagaa 28501386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 29520201 - 29520164
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  29520201 tactacctccgtccctaattataagacccttttgagaa 29520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 31937076 - 31937113
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  31937076 tactacctccgtccctaattataagacccttttgagaa 31937113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 46949992 - 46950029
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  46949992 tactacctccgtccctaattataagacccttttgagaa 46950029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 49793091 - 49793128
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  49793091 tactacctccgtccctaattataagacccttttgagaa 49793128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 55563165 - 55563128
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgaga 333  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  55563165 ttactacctccgtccctaattataagacccttttgaga 55563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 56432518 - 56432555
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  56432518 tactacctccgtccctaattataagacccttttgagaa 56432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 4549921 - 4549889
Alignment:
Q  302 cctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||| |||||||||||||||||||    
T  4549921 cctccgtccctaattataagactcttttgagaa 4549889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 6462727 - 6462691
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgaga 333  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  6462727 tactacctccgtccctaattataagattcttttgaga 6462691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 23623935 - 23623899
Alignment:
Q  295 tttactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||||| |||| |||||||||||    
T  23623935 tttactacctccgtccctaattatatgactcttttga 23623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 32899255 - 32899219
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgaga 333  Q
    |||||||||||||||||| |||||||| |||||||||    
T  32899255 tactacctccgtccctaattataagacccttttgaga 32899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 37639924 - 37639888
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgaga 333  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  37639924 tactatctccgtccctaattataagactcttttgaga 37639888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 5150 - 5188
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  5150 ttactacctccgtccctaattataagacccttttgagaa 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 3819 - 3748
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaannnnnnngtctcttattataagacccctttgcta 368  Q
    |||| ||||||||||||| |||||||| ||||||||||       ||| ||| |||||||||||||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaatttttttgtccctttttataagacccctttgcta 3748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 10220 - 10182
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  10220 ttactacctccgtccctaattataagacccttttgagaa 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 18496 - 18534
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  18496 ttactacctccgtccctaattataagacccttttgagaa 18534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 48653 - 48691
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  48653 ttactacctccgtccctaattataagacccttttgagaa 48691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 23286512 - 23286474
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  23286512 ttactacctccgtccctaattataagacccttttgagaa 23286474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 24857556 - 24857590
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  24857556 tactacctccgtccctaattataagactcttttga 24857590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 39971014 - 39971048
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttga 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  39971014 tactacctccgtccctaattataagactcttttga 39971048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 40004455 - 40004409
Alignment:
Q  288 tcttttatttactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||| |||| ||||||||||||| |||||||| ||||||||||    
T  40004455 tcttttatatactccctccgtccctaattataagacccttttgagaa 40004409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 43060449 - 43060411
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgagaa 334  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  43060449 ttactacctccgtccctaattataagacccttttgagaa 43060411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 3028013 - 3028050
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  3028013 tactacctccgtccctaattataagacccttttgagaa 3028050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 8949812 - 8949849
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  8949812 tactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 15190852 - 15190815
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  15190852 tactccctccgtccctaattataagactcttttgagaa 15190815  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 19571977 - 19571940
Alignment:
Q  296 ttactacctccgtccctaaatataagactcttttgaga 333  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  19571977 ttactacctccgtccctaattataagacccttttgaga 19571940  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 23260175 - 23260138
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  23260175 tactacctccgtccctaattataagacccttttgagaa 23260138  T

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Target: scaffold0457 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 4700 - 4663
Alignment:
Q  297 tactacctccgtccctaaatataagactcttttgagaa 334  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  4700 tactacctccgtccctaattataagattcttttgagaa 4663  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 55930 - 55962
Alignment:
Q  300 tacctccgtccctaaatataagactcttttgag 332  Q
    ||||||||||| |||||||||||||||||||||    
T  55930 tacctccgtccttaaatataagactcttttgag 55962  T

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