View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5418_low_64 (Length: 315)

Name: NF5418_low_64
Description: NF5418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5418_low_64
NF5418_low_64
[»] chr4 (23 HSPs)
chr4 (151-304)||(999262-999415)
chr4 (19-100)||(999461-999542)
chr4 (167-213)||(40742599-40742645)
chr4 (158-212)||(40613449-40613503)
chr4 (167-212)||(5775364-5775409)
chr4 (156-209)||(22440609-22440662)
chr4 (162-211)||(44081584-44081633)
chr4 (159-211)||(3712516-3712568)
chr4 (169-213)||(13134460-13134504)
chr4 (164-212)||(33950141-33950189)
chr4 (166-210)||(36635331-36635375)
chr4 (158-205)||(8423731-8423778)
chr4 (167-206)||(21539879-21539918)
chr4 (159-206)||(37698712-37698759)
chr4 (165-204)||(56257939-56257978)
chr4 (166-212)||(7214528-7214574)
chr4 (167-208)||(903930-903971)
chr4 (168-205)||(6273953-6273990)
chr4 (174-211)||(10499277-10499314)
chr4 (164-212)||(16189714-16189762)
chr4 (156-212)||(26504305-26504361)
chr4 (165-205)||(30838216-30838256)
chr4 (159-211)||(56488517-56488569)
[»] chr5 (30 HSPs)
chr5 (158-211)||(12927653-12927706)
chr5 (158-211)||(27144462-27144515)
chr5 (165-212)||(23012414-23012461)
chr5 (164-212)||(36838548-36838596)
chr5 (165-212)||(16203801-16203848)
chr5 (158-212)||(3966502-3966556)
chr5 (158-212)||(11685938-11685992)
chr5 (167-209)||(33035810-33035852)
chr5 (165-210)||(6471897-6471942)
chr5 (164-213)||(34879355-34879404)
chr5 (166-207)||(35017044-35017085)
chr5 (165-210)||(39205886-39205931)
chr5 (164-212)||(30502394-30502442)
chr5 (164-212)||(30542737-30542785)
chr5 (165-213)||(41091262-41091310)
chr5 (169-212)||(14873527-14873570)
chr5 (157-212)||(23220981-23221036)
chr5 (165-208)||(31682040-31682082)
chr5 (158-212)||(6035482-6035535)
chr5 (156-206)||(10022629-10022679)
chr5 (170-212)||(15086482-15086524)
chr5 (156-202)||(19438340-19438386)
chr5 (159-213)||(23015994-23016048)
chr5 (158-212)||(28588680-28588734)
chr5 (167-212)||(25863212-25863257)
chr5 (165-210)||(28473939-28473984)
chr5 (167-212)||(43554529-43554574)
chr5 (158-202)||(16304440-16304484)
chr5 (167-211)||(32630742-32630786)
chr5 (168-212)||(39696005-39696049)
[»] chr2 (22 HSPs)
chr2 (167-212)||(30527601-30527646)
chr2 (158-210)||(21616761-21616813)
chr2 (164-212)||(34691811-34691859)
chr2 (164-212)||(34714223-34714271)
chr2 (158-213)||(37411249-37411304)
chr2 (166-212)||(5367199-5367245)
chr2 (158-212)||(23718025-23718079)
chr2 (158-212)||(24105697-24105751)
chr2 (159-212)||(44860320-44860373)
chr2 (164-207)||(2423874-2423917)
chr2 (166-209)||(2665897-2665940)
chr2 (165-212)||(20539680-20539727)
chr2 (158-212)||(18276520-18276574)
chr2 (158-212)||(24975331-24975385)
chr2 (158-208)||(28677908-28677958)
chr2 (167-213)||(36281693-36281739)
chr2 (167-212)||(23354658-23354703)
chr2 (158-211)||(31808076-31808129)
chr2 (167-212)||(39279683-39279728)
chr2 (164-212)||(31018595-31018643)
chr2 (180-212)||(34784988-34785020)
chr2 (167-211)||(35449521-35449565)
[»] chr8 (20 HSPs)
chr8 (157-213)||(34897083-34897139)
chr8 (158-209)||(39954288-39954339)
chr8 (165-210)||(14731718-14731763)
chr8 (165-212)||(12606835-12606882)
chr8 (165-212)||(13844602-13844649)
chr8 (164-211)||(20785472-20785519)
chr8 (158-211)||(24362209-24362262)
chr8 (167-212)||(33405390-33405435)
chr8 (160-212)||(34222948-34223000)
chr8 (165-212)||(31236583-31236630)
chr8 (165-211)||(3025557-3025603)
chr8 (158-208)||(4611533-4611583)
chr8 (158-212)||(8342971-8343025)
chr8 (166-212)||(14134706-14134752)
chr8 (166-212)||(15816135-15816181)
chr8 (167-212)||(4786344-4786389)
chr8 (158-203)||(8343315-8343360)
chr8 (167-212)||(11927092-11927137)
chr8 (167-212)||(39820437-39820482)
chr8 (165-213)||(12570513-12570561)
[»] chr6 (34 HSPs)
chr6 (164-212)||(24832593-24832641)
chr6 (165-212)||(7086801-7086848)
chr6 (158-211)||(19040351-19040404)
chr6 (164-212)||(7265599-7265647)
chr6 (165-212)||(7938122-7938169)
chr6 (165-212)||(7996384-7996431)
chr6 (165-212)||(8022370-8022417)
chr6 (165-212)||(9025500-9025547)
chr6 (158-213)||(10842531-10842586)
chr6 (158-212)||(5732516-5732570)
chr6 (166-212)||(9195760-9195806)
chr6 (164-212)||(6665218-6665266)
chr6 (157-213)||(13851734-13851790)
chr6 (165-213)||(26562695-26562743)
chr6 (164-212)||(30866150-30866198)
chr6 (160-212)||(34073353-34073405)
chr6 (165-204)||(8805586-8805625)
chr6 (159-210)||(10888982-10889033)
chr6 (171-214)||(11591874-11591917)
chr6 (169-212)||(13364711-13364754)
chr6 (165-212)||(21924941-21924988)
chr6 (158-212)||(7377978-7378032)
chr6 (158-212)||(9027177-9027231)
chr6 (158-212)||(9629382-9629436)
chr6 (158-212)||(9658878-9658932)
chr6 (167-213)||(21142126-21142172)
chr6 (166-212)||(26178687-26178733)
chr6 (167-212)||(6389751-6389796)
chr6 (167-212)||(9617442-9617487)
chr6 (167-212)||(17168469-17168514)
chr6 (166-211)||(17302354-17302399)
chr6 (167-207)||(677845-677885)
chr6 (168-212)||(2153893-2153937)
chr6 (166-210)||(7151419-7151463)
[»] chr3 (21 HSPs)
chr3 (164-211)||(49505161-49505208)
chr3 (158-212)||(8383256-8383310)
chr3 (165-210)||(11313808-11313853)
chr3 (158-211)||(32804547-32804600)
chr3 (164-212)||(8039841-8039889)
chr3 (166-213)||(29508451-29508498)
chr3 (158-212)||(7928449-7928503)
chr3 (158-212)||(11665943-11665997)
chr3 (165-204)||(27277852-27277891)
chr3 (158-208)||(1438803-1438853)
chr3 (166-212)||(17005625-17005671)
chr3 (165-210)||(10455796-10455841)
chr3 (159-212)||(10690268-10690321)
chr3 (159-204)||(11251978-11252023)
chr3 (160-213)||(11658816-11658869)
chr3 (159-212)||(34307786-34307839)
chr3 (158-211)||(48202276-48202329)
chr3 (170-210)||(15314884-15314924)
chr3 (158-210)||(16192758-16192810)
chr3 (157-205)||(23870572-23870620)
chr3 (166-206)||(29112292-29112332)
[»] chr1 (39 HSPs)
chr1 (158-212)||(38503319-38503373)
chr1 (159-211)||(7918218-7918270)
chr1 (156-210)||(11605943-11605997)
chr1 (166-208)||(14332652-14332694)
chr1 (165-211)||(34712390-34712436)
chr1 (158-212)||(36878460-36878514)
chr1 (158-212)||(39953152-39953206)
chr1 (167-212)||(1864886-1864931)
chr1 (167-212)||(39130773-39130818)
chr1 (156-212)||(9629906-9629962)
chr1 (158-210)||(25098563-25098615)
chr1 (166-210)||(35999330-35999374)
chr1 (164-212)||(44482235-44482283)
chr1 (165-212)||(38075976-38076023)
chr1 (165-208)||(40181877-40181920)
chr1 (165-212)||(46348389-46348436)
chr1 (164-210)||(6427355-6427401)
chr1 (166-208)||(12707883-12707925)
chr1 (166-208)||(12713337-12713379)
chr1 (166-208)||(12717428-12717470)
chr1 (158-212)||(17831537-17831591)
chr1 (158-212)||(21530688-21530742)
chr1 (169-211)||(25361896-25361938)
chr1 (158-212)||(41877476-41877530)
chr1 (158-211)||(398772-398825)
chr1 (166-211)||(10233260-10233305)
chr1 (165-210)||(13436464-13436509)
chr1 (165-206)||(16927197-16927238)
chr1 (171-212)||(25272494-25272535)
chr1 (158-211)||(32724105-32724158)
chr1 (159-212)||(34371714-34371766)
chr1 (167-212)||(52903257-52903302)
chr1 (164-212)||(9709825-9709873)
chr1 (165-209)||(12443469-12443513)
chr1 (167-211)||(16164322-16164366)
chr1 (169-209)||(19324572-19324612)
chr1 (167-211)||(23804436-23804480)
chr1 (167-207)||(26837753-26837793)
chr1 (165-212)||(29229467-29229515)
[»] chr7 (33 HSPs)
chr7 (165-212)||(3721099-3721146)
chr7 (165-212)||(7328697-7328744)
chr7 (158-212)||(9482933-9482987)
chr7 (158-212)||(20549790-20549844)
chr7 (158-212)||(27093419-27093473)
chr7 (158-212)||(27184828-27184882)
chr7 (157-206)||(5235984-5236033)
chr7 (158-211)||(5548675-5548728)
chr7 (167-212)||(15902830-15902875)
chr7 (158-211)||(32308119-32308172)
chr7 (158-210)||(33384590-33384642)
chr7 (165-212)||(3142084-3142131)
chr7 (167-210)||(5233637-5233680)
chr7 (159-210)||(8160416-8160467)
chr7 (164-211)||(17851436-17851483)
chr7 (158-212)||(1433453-1433507)
chr7 (157-211)||(2034439-2034493)
chr7 (158-212)||(2948682-2948736)
chr7 (167-209)||(16341504-16341546)
chr7 (158-212)||(19206049-19206103)
chr7 (158-212)||(26329388-26329442)
chr7 (158-204)||(29787383-29787429)
chr7 (167-212)||(3520348-3520393)
chr7 (167-212)||(8239056-8239101)
chr7 (166-203)||(11831439-11831476)
chr7 (159-212)||(21880152-21880205)
chr7 (166-211)||(22868049-22868094)
chr7 (167-212)||(23128667-23128712)
chr7 (167-212)||(29812670-29812715)
chr7 (164-204)||(2424619-2424659)
chr7 (180-212)||(18213039-18213071)
chr7 (172-212)||(22602716-22602756)
chr7 (159-211)||(42720897-42720949)
[»] scaffold0022 (1 HSPs)
scaffold0022 (167-213)||(90851-90897)
[»] scaffold0123 (1 HSPs)
scaffold0123 (159-212)||(44531-44584)
[»] scaffold0024 (1 HSPs)
scaffold0024 (167-211)||(68249-68293)
[»] scaffold0020 (1 HSPs)
scaffold0020 (165-212)||(135318-135365)
[»] scaffold0697 (1 HSPs)
scaffold0697 (158-212)||(1643-1697)
[»] scaffold0036 (1 HSPs)
scaffold0036 (166-212)||(9753-9799)
[»] scaffold0236 (1 HSPs)
scaffold0236 (167-212)||(25774-25819)
[»] scaffold0044 (1 HSPs)
scaffold0044 (168-212)||(53189-53233)


Alignment Details
Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 999415 - 999262
Alignment:
Q  151 catagatcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcgacacgtcgcgcctaatccgaagagtgtccgaggttcat 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  999415 catagatcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcgacatgtcgcgcctaatccgaagagtgtccgaggttcat 999316  T
Q  251 tcataggatataattcatcaggttgctttgtgtgtgtgattttttaatcccttt 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  999315 tcataggatataattcatcaggttgctttgtgtgtgtgattttttaatcccttt 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 999542 - 999461
Alignment:
Q  19 ataagaacacaggttgttcaaacctaaaaagagacatgtttgatcaaaatgattatttcaaggtttccttgtgatcataaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  999542 ataagaacacaggttgttcaaacctaaaaagagacatgtttgatcaaaatgattatttcaaggtttccttgtgatcataaag 999461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 40742599 - 40742645
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||    
T  40742599 taataatttgagaaaatcatataatctagtgtaattatatgtgtcga 40742645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 40613449 - 40613503
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  40613449 cgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 5775409 - 5775364
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcg 5775364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 22440662 - 22440609
Alignment:
Q  156 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtg 209  Q
    ||||||| || |||||||||||| |||||| |||||| ||||||||||||||||    
T  22440662 atcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 44081633 - 44081584
Alignment:
Q  162 atcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||| |||||||||||  ||||||||||||||| ||||||||||||||||    
T  44081633 atcgttaataatttgaaaaaatcatataatttaatgtaattatatgtgtc 44081584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 3712568 - 3712516
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||| ||||||||||||||| ||||||| ||||| | ||||||||||||||||    
T  3712568 gacaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 13134460 - 13134504
Alignment:
Q  169 ataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    ||||||| || |||||| |||||||||||||||||||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtgtcga 13134504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 33950141 - 33950189
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| |||||| |||||||| |||||| ||||||||||    
T  33950141 cgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcg 33950189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 36635331 - 36635375
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 8423778 - 8423731
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattata 205  Q
    ||||| ||||||||||||||| |||||| |||||| ||||||||||||    
T  8423778 cgacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 21539918 - 21539879
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatat 206  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  21539918 taataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 37698712 - 37698759
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatat 206  Q
    |||||| ||||||||||||| |||| |||||||| |||||||||||||    
T  37698712 gacatctctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 56257939 - 56257978
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattat 204  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  56257939 gctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 7214574 - 7214528
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  7214574 ctaataatttgagaaaatcacataatttaatgtaattatatgcgtcg 7214528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 6273953 - 6273990
Alignment:
Q  168 aataatttgagtaaatcatataatttagtgtaattata 205  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  6273953 aataatttgagaaaatgatataatttagtgtaattata 6273990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 10499314 - 10499277
Alignment:
Q  174 ttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtc 10499277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 16189714 - 16189762
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||| |||||||| |||||| |||||| ||||||||||| |||||||    
T  16189714 cgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcg 16189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 26504361 - 26504305
Alignment:
Q  156 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||  ||||||||||| || |||||| ||| || |||||||||||||||||||    
T  26504361 atcgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcg 26504305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 30838216 - 30838256
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattata 205  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  30838216 gctaataatttgataaaattatataatttagtgtaattata 30838256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 56488569 - 56488517
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||| |||||| |||||||| ||||||||||||| || ||||| |||||||||    
T  56488569 gacaccgctaacaatttgagaaaatcatataattcagggtaatcatatgtgtc 56488517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 12927653 - 12927706
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  12927653 cgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgtc 12927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 27144462 - 27144515
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  27144462 cgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 23012461 - 23012414
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgtcg 23012414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 36838548 - 36838596
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  36838548 cgctaataatttgagaaaattacataatttagtgtaattatatgtgtcg 36838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 16203848 - 16203801
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||    
T  16203848 gctaataatttgagaaaatctcataatttagtgtaattatatgtgtcg 16203801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 3966502 - 3966556
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| |||||| | |||| |||||||||||||||||||    
T  3966502 cgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 11685938 - 11685992
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| || ||  ||||||||||||||||||||||||||    
T  11685938 cgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcg 11685992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 33035852 - 33035810
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtg 209  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  33035852 taataatttgaataaatcatataattcagtgtaattatatgtg 33035810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 6471942 - 6471897
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 34879355 - 34879404
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||| |||||||| ||||||||||||| |||||||| |||||||||||    
T  34879355 cgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcga 34879404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 35017044 - 35017085
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatg 207  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 39205886 - 39205931
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||    
T  39205886 gctaataatttgagaaaatcatataattaggtgtaattatatgtgt 39205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 30502442 - 30502394
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  30502442 cgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 30542785 - 30542737
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  30542785 cgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 41091310 - 41091262
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  41091310 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcga 41091262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 14873527 - 14873570
Alignment:
Q  169 ataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||| ||| || ||||||||||||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcg 14873570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 23220981 - 23221036
Alignment:
Q  157 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||| ||||||||||||||  |||||| |||||||||||| || ||||||||||    
T  23220981 tcgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcg 23221036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 31682040 - 31682082
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  31682040 gctaataatt-gagaaaatcatataatttagtgtaattatatgt 31682082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 6035482 - 6035535
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| |||| |||||||| ||||||||||||| |||||    
T  6035482 cgacaccgctaataatttgag-aaataatataattcagtgtaattatatttgtcg 6035535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 10022629 - 10022679
Alignment:
Q  156 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatat 206  Q
    |||||||||| | |||||||||  ||||||||||||| |||||||||||||    
T  10022629 atcgacatcgttgataatttgataaaatcatataattcagtgtaattatat 10022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 15086482 - 15086524
Alignment:
Q  170 taatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||| |||||||||||| || |||||||||||||||||    
T  15086482 taatttgagaaaatcatataatgtaatgtaattatatgtgtcg 15086524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 19438340 - 19438386
Alignment:
Q  156 atcgacatcgctaataatttgagtaaatcatataatttagtgtaatt 202  Q
    |||||||||||| |||||||||| |||||| |||||| |||||||||    
T  19438340 atcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 23016048 - 23015994
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    ||||||| |||| ||||||| |||||| |||||| |||||||||||| |||||||    
T  23016048 gacatcgttaatcatttgagaaaatcacataattcagtgtaattataggtgtcga 23015994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 28588734 - 28588680
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| || |||||||||||| |||||| |||||| |||||||||||| ||||||    
T  28588734 cgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 25863212 - 25863257
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 28473939 - 28473984
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||| ||||||||| ||||| ||||||||||||||||||| |||||    
T  28473939 gctattaatttgagaaaatcgtataatttagtgtaattatgtgtgt 28473984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 43554529 - 43554574
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  43554529 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 43554574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 16304484 - 16304440
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaatt 202  Q
    ||||| |||| || |||||| ||||||||||||||||||||||||    
T  16304484 cgacaccgctgattatttgaataaatcatataatttagtgtaatt 16304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 32630786 - 32630742
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||    
T  32630786 taataatttgagaaaattatataattcaatgtaattatatgtgtc 32630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 39696049 - 39696005
Alignment:
Q  168 aataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  39696049 aataatttgagaaaatgatataatttagtgtaatcataggtgtcg 39696005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 30527646 - 30527601
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcg 30527601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 21616761 - 21616813
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  21616761 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 34691859 - 34691811
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  34691859 cgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg 34691811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 34714271 - 34714223
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  34714271 cgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg 34714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 37411304 - 37411249
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    ||||| ||||||||||||||| |||||| |||||| ||||| ||||||||||||||    
T  37411304 cgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcga 37411249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 5367199 - 5367245
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcg 5367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 23718025 - 23718079
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| || ||| |||||| |||||||||||||||||||    
T  23718025 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 24105697 - 24105751
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| || ||| |||||| |||||||||||||||||||    
T  24105697 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 44860320 - 44860373
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||| ||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 2423874 - 2423917
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatg 207  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||    
T  2423874 cgctaaaaatttgagaaaatcatataatttagtataattatatg 2423917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 2665940 - 2665897
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtg 209  Q
    |||||||||| || |||||| |||||||||||||||||||||||    
T  2665940 ctaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 20539727 - 20539680
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||  |||||||||||||||||||||||| | ||||||    
T  20539727 gctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 18276520 - 18276574
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| ||||||  ||||| ||||||||||| |||||||    
T  18276520 cgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcg 18276574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 24975385 - 24975331
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| ||||| ||||||| ||||||| |||||| ||||    
T  24975385 cgacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcg 24975331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 28677908 - 28677958
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    ||||| ||||||||||||||  |||||| |||||| |||||||||||||||    
T  28677908 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 36281693 - 36281739
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||||||||| |||||| ||||||||||||||| |||||| ||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatatgtttcga 36281739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 23354703 - 23354658
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  23354703 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 23354658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 31808076 - 31808129
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| |||||||||||| |  |||||| |||||| ||||||||||||||||||    
T  31808076 cgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 39279683 - 39279728
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||| |||| |||||| |||||| |||||||||||||||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgtcg 39279728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 31018595 - 31018643
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| || |||||| || |||||||||||||||| ||||||    
T  31018595 cgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcg 31018643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 34785020 - 34784988
Alignment:
Q  180 aaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||| ||||||||||||||||||||||||||    
T  34785020 aaatcacataatttagtgtaattatatgtgtcg 34784988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 35449521 - 35449565
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||| |||||| | |||| ||||||||||||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 34897083 - 34897139
Alignment:
Q  157 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  34897083 tcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcga 34897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 39954339 - 39954288
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtg 209  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  39954339 cgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 14731718 - 14731763
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  14731718 gctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 12606882 - 12606835
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||||    
T  12606882 gctaataatttgagaaaatcatataattcaatgtaattatatgtgtcg 12606835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 13844649 - 13844602
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||    
T  13844649 gctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 20785519 - 20785472
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||    
T  20785519 cgctaataatttgaggaaatcacataatttaatgtaattatatgtgtc 20785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 24362262 - 24362209
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| |||||||||||||||  ||||| |||||| ||||||||||||||||||    
T  24362262 cgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 33405435 - 33405390
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| ||| || ||||||||||||||||||||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcg 33405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 34222948 - 34223000
Alignment:
Q  160 acatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||||| |  |||||| |||||| |||||||||||||||||||    
T  34222948 acatcgctaataatttaataaaatcacataattaagtgtaattatatgtgtcg 34223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 31236630 - 31236583
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||||| |||||| | |||||||||||||||||    
T  31236630 gctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 3025557 - 3025603
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||||| |||||| |||||| |||||||||||| |||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 4611533 - 4611583
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    ||||| ||||||||||||||| |||| | |||||| |||||||||||||||    
T  4611533 cgacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 8342971 - 8343025
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||| |||||||||||||  |||||| ||||||||||||||||| | ||||||    
T  8342971 cgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 8343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 14134706 - 14134752
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||| |||||| |||||| ||||||||||||| |||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcg 14134752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 15816181 - 15816135
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||  |||||| ||||||||||||||||||| ||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 4786389 - 4786344
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||| || |||||| |||||| |||||||||||||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcg 4786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 8343315 - 8343360
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaatta 203  Q
    |||||| |||||||||||||  |||||| |||||||||||||||||    
T  8343315 cgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 11927137 - 11927092
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||  |||||| |||||| |||||||||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 39820437 - 39820482
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  39820437 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 39820482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 12570561 - 12570513
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    ||||||||||| || ||| || |||||| ||||||||||||||||||||    
T  12570561 gctaataatttaagaaaaacacataattaagtgtaattatatgtgtcga 12570513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 24832593 - 24832641
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24832593 cgctaataatttgagaaaatcttataatttagtgtaattatatgtgtcg 24832641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 7086801 - 7086848
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  7086801 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 19040351 - 19040404
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||    
T  19040351 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 7265647 - 7265599
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  7265647 cgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 7938122 - 7938169
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||    
T  7938122 gctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 7996431 - 7996384
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  7996431 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcg 7996384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 8022370 - 8022417
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  8022370 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcg 8022417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 9025547 - 9025500
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 10842531 - 10842586
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    ||||| ||||||||||||||  |||||| ||||||||||||||| |||||||||||    
T  10842531 cgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcga 10842586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 5732570 - 5732516
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| || |||||||||||| |||||| ||| ||||||||||||||||||||||    
T  5732570 cgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcg 5732516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 9195806 - 9195760
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcg 9195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 6665218 - 6665266
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||||||||||| |||||| || |||||||| |||||||    
T  6665218 cgctaataatttgagtaaatcacataattcagagtaattatttgtgtcg 6665266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 13851734 - 13851790
Alignment:
Q  157 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||| ||||||||||||||| |||| |  ||||| ||||||||||||||||||||    
T  13851734 tcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcga 13851790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 26562695 - 26562743
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    ||||| |||||||| |||||| |||||| ||||||||||||||||||||    
T  26562695 gctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcga 26562743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 30866198 - 30866150
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| |||||| |||||| | |||||||||||||||||    
T  30866198 cgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 34073405 - 34073353
Alignment:
Q  160 acatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||||||| |||||  |||||| |||||||||||||| ||||    
T  34073405 acatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcg 34073353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 8805625 - 8805586
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattat 204  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  8805625 gctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 10889033 - 10888982
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||| ||||||||||||||  |||||| |||||||||||| |||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 11591917 - 11591874
Alignment:
Q  171 aatttgagtaaatcatataatttagtgtaattatatgtgtcgac 214  Q
    |||||||| |||||| |||||| |||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcgac 11591874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 13364754 - 13364711
Alignment:
Q  169 ataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcg 13364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 21924988 - 21924941
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| | |||| |||||| |||||||||||||||||||    
T  21924988 gctaataatttgagaatatcaaataattcagtgtaattatatgtgtcg 21924941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 7377978 - 7378032
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||||| |||||||| |||||| |||||| | |||||||||||||||||    
T  7377978 cgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcg 7378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 9027177 - 9027231
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||||||||||||||  ||||| ||||||  ||||||||||||||||||    
T  9027177 cgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcg 9027231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 9629382 - 9629436
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||| ||||||||||| |||||| |||||| | |||||||||||||||||    
T  9629382 cgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9629436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 9658878 - 9658932
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||||||||||| || |||||| |||||| ||||||||||||| |||||    
T  9658878 cgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcg 9658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 21142126 - 21142172
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||||||||| ||||||||||||| ||| || |||||||||||||    
T  21142126 taataatttgagaaaatcatataattcagtctagttatatgtgtcga 21142172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 26178733 - 26178687
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||  |||||| ||||||||||||||| ||||||||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgtcg 26178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 6389751 - 6389796
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  6389751 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 6389796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 9617442 - 9617487
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||||| |||||| | |||||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9617487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 17168514 - 17168469
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  17168514 taataatttgagaaaatgatataatttagtgtaataataggtgtcg 17168469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 17302354 - 17302399
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||| || |||||| ||||||| |||||||||||||||||    
T  17302354 ctaataatttaagaaaatcacataattttgtgtaattatatgtgtc 17302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 677845 - 677885
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatg 207  Q
    |||||||||||| |||||||||||| ||||||| |||||||    
T  677845 taataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 2153937 - 2153893
Alignment:
Q  168 aataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||| || |||| ||||||||||||||||||||| ||||||    
T  2153937 aataatttaagaaaatgatataatttagtgtaattataggtgtcg 2153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 7151419 - 7151463
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||||||||||  |||||| |||||| |||||||||||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgt 7151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 49505208 - 49505161
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  49505208 cgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 8383256 - 8383310
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  8383256 cgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 11313853 - 11313808
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  11313853 gctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 32804600 - 32804547
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| || |||||||||||| |||||| |||||||||||||||||||||||||    
T  32804600 cgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 8039889 - 8039841
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||||    
T  8039889 cgctaataatttgagaaaattatataattcagtgtaattatatgtgtcg 8039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 29508451 - 29508498
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcga 29508498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 7928449 - 7928503
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  7928449 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 11665943 - 11665997
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  11665943 cgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcg 11665997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 27277891 - 27277852
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattat 204  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  27277891 gctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 1438803 - 1438853
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    |||||||||||| |||||||| |||||| |||||| ||| |||||||||||    
T  1438803 cgacatcgctaacaatttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 17005671 - 17005625
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 10455796 - 10455841
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||||    
T  10455796 gctaataatatgagaaaatcatataactaagtgtaattatatgtgt 10455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 10690321 - 10690268
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||| |||||||||| |||| |||||| |||||| ||||||||||||| |||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcg 10690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 11251978 - 11252023
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattat 204  Q
    ||||| |||||||||||||| |||||| |||||| |||||||||||    
T  11251978 gacattgctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 11658816 - 11658869
Alignment:
Q  160 acatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||| |||||||||||| |||||  |||||| ||||| ||||||||||||||    
T  11658816 acatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcga 11658869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 34307839 - 34307786
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||| ||||||||||||||| |||||| ||| || |||||||||||| ||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 48202329 - 48202276
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||  ||||| |||||| |||||| |||||||| ||||||||||||||||    
T  48202329 cgacatccataatagtttgagaaaatcacataatttaatgtaattatatgtgtc 48202276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 15314924 - 15314884
Alignment:
Q  170 taatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||||||  |||||| ||||||||||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgt 15314884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 16192810 - 16192758
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||| || |||||||||||| |||| | |||||| |||||||||||||||||    
T  16192810 cgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 23870620 - 23870572
Alignment:
Q  157 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattata 205  Q
    |||||| ||||||||||||||  ||||||||||||| ||||| ||||||    
T  23870620 tcgacaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 29112332 - 29112292
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatat 206  Q
    ||||| ||||||| ||||||||||||| |||||||||||||    
T  29112332 ctaattatttgagaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 38503319 - 38503373
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| |||||||||| || |||||||||||||||||||    
T  38503319 cgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcg 38503373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 7918270 - 7918218
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||||||||    
T  7918270 gacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 11605997 - 11605943
Alignment:
Q  156 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||| ||||||    
T  11605997 atcgacatcgctaataatttgaaaaaatcatataattcagtgaaattacatgtgt 11605943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 14332694 - 14332652
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 34712436 - 34712390
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 36878460 - 36878514
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||| ||||||    
T  36878460 cgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 39953206 - 39953152
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||||||||||| || |||||| |||||||||||||||| |||||||||    
T  39953206 cgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcg 39953152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 1864931 - 1864886
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 39130818 - 39130773
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcg 39130773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 9629962 - 9629906
Alignment:
Q  156 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||| ||||||||||||||  ||||||||||||| ||||| |||||| ||||||    
T  9629962 atcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcg 9629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 25098615 - 25098563
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||| |||| |||||||||| |||||| |||||| |||||||||||||||||    
T  25098615 cgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 35999374 - 35999330
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||||||||| || ||||||||||||||||| |||||||||||||    
T  35999374 ctaataatttaagaaaatcatataatttagtataattatatgtgt 35999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 44482235 - 44482283
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||| |||||||||| |||||| |||||| |||||||||||||||||||    
T  44482235 cgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcg 44482283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 38076023 - 38075976
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||||||||| |||| | |||||||| ||||||||||    
T  38076023 gctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcg 38075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 40181877 - 40181920
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    |||||||||||||| |||||| |||||| |||||||||||||||    
T  40181877 gctaataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 46348436 - 46348389
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||  |||||||||||||||||||||||| | ||||||    
T  46348436 gctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 6427355 - 6427401
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||||||||||||| |||||| |||||| | |||||||||||||||    
T  6427355 cgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 12707925 - 12707883
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    |||||||||| || |||||||||||||||||| ||||||||||    
T  12707925 ctaataatttaagaaaatcatataatttagtgcaattatatgt 12707883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 12713379 - 12713337
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  12713379 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 12717470 - 12717428
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgt 208  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  12717470 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 17831591 - 17831537
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| |||||| || ||| |||||||| ||||||||||    
T  17831591 cgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 21530688 - 21530742
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| || |||||||||||| |||||||||||||| || |||||||| ||||||    
T  21530688 cgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcg 21530742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 25361896 - 25361938
Alignment:
Q  169 ataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||| |||||| |||||| ||||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 41877530 - 41877476
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| |||| | ||||||||||||||||| | ||||||    
T  41877530 cgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcg 41877476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 398825 - 398772
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| ||||||||||||||  |||||| |||||| |||||||||||| |||||    
T  398825 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 10233260 - 10233305
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||||| ||||| |||||| |||||| ||||||||||||||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 13436464 - 13436509
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||||||||| || |||||| |||||| |||||||||||||||||    
T  13436464 gctaataatttaaggaaatcacataattcagtgtaattatatgtgt 13436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 16927238 - 16927197
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatat 206  Q
    |||||||||||||  ||||||||||||| |||||||||||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 25272494 - 25272535
Alignment:
Q  171 aatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||| |||||| ||||||||||||||||||| ||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcg 25272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 32724158 - 32724105
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||| |||||||||||| || | | |||||||| ||||||||||||||||    
T  32724158 cgacatcgttaataatttgagaaatttacataatttaatgtaattatatgtgtc 32724105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 34371714 - 34371766
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||| ||||||||||| ||| |||||| |||||| |||||||||||||||||||    
T  34371714 gacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcg 34371766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 52903257 - 52903302
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||| |  ||||||||||||| |||||||||||||||||||    
T  52903257 taataatttaataaaatcatataattcagtgtaattatatgtgtcg 52903302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 9709825 - 9709873
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||||| |||||| ||||||   |||||||||||||||||    
T  9709825 cgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcg 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 12443513 - 12443469
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtg 209  Q
    |||||||||||||| |||||| |||||| ||||||||| ||||||    
T  12443513 gctaataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||  |||||| |||||||| ||||||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  169 ataatttgagtaaatcatataatttagtgtaattatatgtg 209  Q
    |||||||||| |||||| |||||| ||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 23804436 - 23804480
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||    
T  23804436 taataatttgataaaattatataatttaatgtaattatatgtgtc 23804480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 26837793 - 26837753
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatg 207  Q
    |||||||||||  |||| |||||||||||||||||||||||    
T  26837793 taataatttgaaaaaataatataatttagtgtaattatatg 26837753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 29229467 - 29229515
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagt-gtaattatatgtgtcg 212  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||||||    
T  29229467 gctaataatttgagaaaatcacatgatttagtggtaattatatgtgtcg 29229515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 3721099 - 3721146
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcg 3721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 7328744 - 7328697
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||    
T  7328744 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcg 7328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 9482933 - 9482987
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||| |||||||||| |||||| | |||| |||||||||||||||||||    
T  9482933 cgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 9482987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 20549790 - 20549844
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  20549790 cgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 27093473 - 27093419
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||||||| ||||    
T  27093473 cgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcg 27093419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 27184828 - 27184882
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||||||| ||||    
T  27184828 cgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcg 27184882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 5235984 - 5236033
Alignment:
Q  157 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatat 206  Q
    |||||| |||||||||||| || |||| ||||||||||||||||||||||    
T  5235984 tcgacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 5548675 - 5548728
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| |||| |||||||||| |||||| |||||| ||||||||||||||||||    
T  5548675 cgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtc 5548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 15902830 - 15902875
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 32308119 - 32308172
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    ||||| ||||||||||||||| |||||| |||||| ||||||||| ||||||||    
T  32308119 cgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 33384642 - 33384590
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    ||||| || ||||||| |||| ||||| |||||||||||||||||||||||||    
T  33384642 cgacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtgt 33384590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 3142131 - 3142084
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||| ||||||||||||||||||| | |||||| ||||||||||    
T  3142131 gctaataaattgagtaaatcatataattcaatgtaatcatatgtgtcg 3142084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 5233637 - 5233680
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||    
T  5233637 taataatttgagaaaatcacataatctagtgtaattatatgtgt 5233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 8160416 - 8160467
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 210  Q
    |||| |||||||||||| || |||| | ||||||||||||||||||||||||    
T  8160416 gacaccgctaataatttaagaaaattacataatttagtgtaattatatgtgt 8160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 17851436 - 17851483
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||| || |||||| |||||| ||||||||||||||||||    
T  17851436 cgctaataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 1433453 - 1433507
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| || |||||||||||| |||||| || |||| ||||||||||||||||||    
T  1433453 cgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcg 1433507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 2034439 - 2034493
Alignment:
Q  157 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||| | ||||||||||||| | ||||||||||||||||||  ||||||||||    
T  2034439 tcgacaccactaataatttgagaatatcatataatttagtgtatatatatgtgtc 2034493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 2948682 - 2948736
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| |||| ||||||| || ||||||  |||||||||||||||||||||||||    
T  2948682 cgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcg 2948736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtg 209  Q
    |||||||||||| |||||| |||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 19206049 - 19206103
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| ||||||||||||||| |||||| |||||| | | |||||||||||||||    
T  19206049 cgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcg 19206103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 26329442 - 26329388
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||| |||||||||||| ||| || | |||| |||||||||||||||||||    
T  26329442 cgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcg 26329388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 29787429 - 29787383
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattat 204  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||    
T  29787429 cgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 3520393 - 3520348
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||| ||||||| ||||||||||||| | |||||||||||||||||    
T  3520393 taatcatttgagaaaatcatataattcaatgtaattatatgtgtcg 3520348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 8239101 - 8239056
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||| || ||||| ||||||| |||||||||||||||||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatgtgtcg 8239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 11831439 - 11831476
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaatta 203  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  11831439 ctaataatttgaaaaaatcatataatttagtgtaatta 11831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 21880152 - 21880205
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||||||||| |||| | |||||| |||||||||| | ||||||    
T  21880152 gacatcgctaataatttgagaaaattacataattcagtgtaattacaagtgtcg 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 22868049 - 22868094
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||| |||| |||||| |||||| ||||||||||||||||||    
T  22868049 ctaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 23128712 - 23128667
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| ||| ||||||||| |||||||| ||||||||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcg 23128667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 29812715 - 29812670
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  29812715 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 29812670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 2424619 - 2424659
Alignment:
Q  164 cgctaataatttgagtaaatcatataatttagtgtaattat 204  Q
    ||||||||||||||| |||||| |||||| |||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 18213071 - 18213039
Alignment:
Q  180 aaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||| ||||||||||||||||||||||||||    
T  18213071 aaatcacataatttagtgtaattatatgtgtcg 18213039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 22602756 - 22602716
Alignment:
Q  172 atttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||| |||||| |||||| |||||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 42720949 - 42720897
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||| ||||||||||||||  |||||| |||||| | ||||||||||||||||    
T  42720949 gacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc 42720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 90851 - 90897
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 213  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcga 90897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 44584 - 44531
Alignment:
Q  159 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||| |||||| |||||||| |||||| |||||| |||||||||||||||||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 68293 - 68249
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 211  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||    
T  68293 taataatttgagaaaatcatataatttagtataattataggtgtc 68249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 135365 - 135318
Alignment:
Q  165 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||||||    
T  135365 gctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 1643 - 1697
Alignment:
Q  158 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||| || |||||||||||| |||||||||||||| || |||||||| ||||||    
T  1643 cgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcg 1697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 9799 - 9753
Alignment:
Q  166 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 9753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 25819 - 25774
Alignment:
Q  167 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    |||||||| ||| |||||| ||||||||||||||||||| ||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcg 25774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  168 aataatttgagtaaatcatataatttagtgtaattatatgtgtcg 212  Q
    ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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