View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5418_low_71 (Length: 288)
Name: NF5418_low_71
Description: NF5418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5418_low_71 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 24028451 - 24028712
Alignment:
| Q |
11 |
tgagatgtcactgtaagcatagatggttgaataacaatgaatattgaagctgacaataagttagaatatataccttaaatccgaaattgagaggtaaaaa |
110 |
Q |
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| T |
24028451 |
tgagatgtcactgtaagcatagatggttgaataacaatgaatattgaagctgacaataagttagaatatataccttaaatccgaaattgagaggtaaaaa |
24028550 |
T |
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| Q |
111 |
tgaatattgaaatccgaaattagttagaatatataccttaaatctttcattgtaaagttgacttgtagttttttgccggttccttctgtaagccgacaat |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
24028551 |
tgaatattgaaatccgaaattagttagaatatataccttaaatctttcattgtaaagttgacttgtagttttttgccggttccttctgtaagctgacaat |
24028650 |
T |
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| Q |
211 |
atcccatgtcctggacaactccaatagcatctaaatatgcatacacatgtaatgttatagtt |
272 |
Q |
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| T |
24028651 |
atcccatgtcctggacaactccaatagcatctaaatatgcatacacatgtaatgttatagtt |
24028712 |
T |
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