View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5418_low_91 (Length: 251)
Name: NF5418_low_91
Description: NF5418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5418_low_91 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 13466583 - 13466351
Alignment:
| Q |
13 |
gattcttaattagttccaagcagaaattaatcaagagtaaaaataattatcaagcattacaaggttatttataatttaccagacattaaaggcatatatg |
112 |
Q |
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| T |
13466583 |
gattcttaattagttccaagcagaaattaatcaagagttaaaataattatcaagcattacaaggttatttataatttaccagacattaaaggcatatatg |
13466484 |
T |
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| Q |
113 |
gcaagataggaggtgtaactgatgcaccaactaaaatcaatttgccacatgtcttcaacatttcaattaatgggtggagtgaatgagggcctgaaactgt |
212 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
13466483 |
gcaagataggaggtgtaactgatgcaccaactaaaattaatttgccacatgtcttcaacatttcaattaatgggtagagtgaatgagggcctgaaactgt |
13466384 |
T |
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| Q |
213 |
gtctatgatgccgtccattgtgtcctttgcttc |
245 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
13466383 |
gtctatgatgccgtccattgtgtcctttgcttc |
13466351 |
T |
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