View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5419_high_5 (Length: 307)
Name: NF5419_high_5
Description: NF5419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5419_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 299
Target Start/End: Original strand, 40358976 - 40359259
Alignment:
| Q |
18 |
attaccacaatttacagaagtggggtgaccaccttttcaacactttttaaaaacctggctnnnnnnnnnn--tcacggtgtcgtgaatgtttgttttagg |
115 |
Q |
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| T |
40358976 |
attaccacaatttacagaagtggggtgaccaccttttcaacactttttaaaaacctggctaaaaaaaaaaaatcacggtgtcgtgaatgttagttttagg |
40359075 |
T |
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| Q |
116 |
ctacaacaaatatctgcgatatcgtgannnnnnnnnacgaccttcagcgttctcctaaactatttttatcagtcaaaagaagtcaaagaataaatattaa |
215 |
Q |
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| T |
40359076 |
ctacaacaaatatctgcgatatcgtgatttttttttacgaccttcagcgttctcctaaactatttttatcagtcaaaagaagtcaaagaataaatattaa |
40359175 |
T |
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| Q |
216 |
attatttttaattaaatgatgattcaagaaaggtaattgattatgctaaagattatggatggtacactgttcgatatgatgatg |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
40359176 |
attatttttaattaaatgatgattcaagaaaggtaattgattatgctaaagattatggatggtacactgttcgatacgatgatg |
40359259 |
T |
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