View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5422-Insertion-11 (Length: 56)
Name: NF5422-Insertion-11
Description: NF5422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5422-Insertion-11 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 50; Significance: 2e-20; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-20
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 38552076 - 38552125
Alignment:
| Q |
7 |
atccaattccaaccacctcagattccaaacaacacaaccactaaccctaa |
56 |
Q |
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| T |
38552076 |
atccaattccaaccacctcagattccaaacaacacaaccactaaccctaa |
38552125 |
T |
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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 38545680 - 38545726
Alignment:
| Q |
10 |
caattccaaccacctcagattccaaacaacacaaccactaaccctaa |
56 |
Q |
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||||||||||||||||| ||||||||||||| | |||| |||||||| |
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| T |
38545680 |
caattccaaccacctcaaattccaaacaacaaacccacaaaccctaa |
38545726 |
T |
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