View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5422-Insertion-8 (Length: 470)
Name: NF5422-Insertion-8
Description: NF5422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5422-Insertion-8 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 8 - 470
Target Start/End: Original strand, 36676701 - 36677157
Alignment:
| Q |
8 |
attttctgtttggttttctacaaaactgaaagatctatgttcttgttcttgttcttgttcttttgcaactagagtgttgaagttgaagttgtaaaaatct |
107 |
Q |
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| T |
36676701 |
attttctgtttggttttctacaaaactgaaagatctatgtt------cttgttcttgttcttttgcaacaagagtgttgaagttgaagttgtaaaaatct |
36676794 |
T |
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| Q |
108 |
ttgattccataactaaaaggatcttgtgtttgtggataaaccactgcttctagtgccatgtctttcactctatctctttcctcttcaggtaaacacataa |
207 |
Q |
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| T |
36676795 |
ttgattccataactaaaaggatcttgtgtttgtggataaaccactgcttctagtgccatgtctttcactctatctctttcctcttcaggtaaacacataa |
36676894 |
T |
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| Q |
208 |
caatcaatcaattttatttctatccttcgagggaaagtggaagatgatgatgaataaaatgttaagtatttttgggcttataaaggccttgttcaaggat |
307 |
Q |
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| T |
36676895 |
caatcaatcaattttatttctatccttcgagggaaagtggaagatgatgatgaataaaatgttaagtatttttgggcttataaaggccttgttcaaggat |
36676994 |
T |
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| Q |
308 |
acaacaatggacagtgatttttgcacgtgaaattccattaaatgtatatagatcattaactttacacggttaattgaatgatggttgttagataaaatca |
407 |
Q |
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| T |
36676995 |
ataacaatggacagtgatttttgcacgtgaaattccattaaatgtatatagatcattaactttacacggttaattgaatgatggttgttagataaaatca |
36677094 |
T |
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| Q |
408 |
aagcaattttagtcaatatcactctattattttattttagcatatgcggtcctttgagtttga |
470 |
Q |
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| T |
36677095 |
aagcaattttagtcaatatcactctattattttattttagcatatgcggtcctttaagtttga |
36677157 |
T |
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