View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5423_low_1 (Length: 400)

Name: NF5423_low_1
Description: NF5423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5423_low_1
NF5423_low_1
[»] chr3 (66 HSPs)
chr3 (11-398)||(16743990-16744377)
chr3 (11-273)||(17912483-17912744)
chr3 (22-347)||(13838905-13839232)
chr3 (11-347)||(14842487-14842824)
chr3 (11-347)||(2049810-2050147)
chr3 (11-347)||(12030073-12030410)
chr3 (11-310)||(15858986-15859287)
chr3 (107-273)||(2449238-2449404)
chr3 (10-283)||(51158008-51158282)
chr3 (211-395)||(19231982-19232169)
chr3 (11-258)||(15936642-15936890)
chr3 (14-258)||(15938484-15938729)
chr3 (227-347)||(19260749-19260869)
chr3 (15-229)||(15614838-15615053)
chr3 (312-390)||(15857120-15857198)
chr3 (315-395)||(3992873-3992953)
chr3 (141-273)||(13975722-13975853)
chr3 (141-273)||(45860937-45861068)
chr3 (315-395)||(55513193-55513273)
chr3 (126-273)||(13954890-13955036)
chr3 (315-395)||(2844514-2844594)
chr3 (11-239)||(16821139-16821369)
chr3 (315-395)||(54037976-54038056)
chr3 (315-395)||(17955832-17955916)
chr3 (315-395)||(7854305-7854385)
chr3 (11-120)||(47984650-47984759)
chr3 (11-120)||(48003224-48003333)
chr3 (315-376)||(45581954-45582016)
chr3 (11-120)||(47993937-47994046)
chr3 (11-120)||(48012510-48012619)
chr3 (11-239)||(55316219-55316449)
chr3 (11-239)||(41270075-41270305)
chr3 (11-52)||(15468555-15468596)
chr3 (331-388)||(17205019-17205076)
chr3 (315-388)||(38810868-38810941)
chr3 (333-388)||(12031849-12031904)
chr3 (315-388)||(13301323-13301396)
chr3 (315-388)||(13311979-13312052)
chr3 (315-348)||(15615137-15615170)
chr3 (331-388)||(17191879-17191936)
chr3 (11-52)||(22275209-22275250)
chr3 (315-347)||(2449152-2449184)
chr3 (315-347)||(16261777-16261809)
chr3 (315-347)||(16933869-16933901)
chr3 (315-347)||(17912398-17912430)
chr3 (315-347)||(23492696-23492728)
chr3 (315-347)||(38168237-38168269)
chr3 (315-347)||(53771365-53771397)
chr3 (331-388)||(3576290-3576347)
chr3 (35-88)||(6228796-6228849)
chr3 (29-122)||(11329098-11329191)
chr3 (11-52)||(13955112-13955153)
chr3 (11-52)||(13975944-13975985)
chr3 (216-257)||(14080715-14080756)
chr3 (316-381)||(15550922-15550987)
chr3 (29-122)||(17139525-17139618)
chr3 (11-52)||(45860805-45860846)
chr3 (315-347)||(11986080-11986112)
chr3 (315-347)||(13954804-13954836)
chr3 (315-347)||(14285289-14285321)
chr3 (315-347)||(19947026-19947058)
chr3 (315-347)||(30153265-30153297)
chr3 (315-347)||(33342204-33342236)
chr3 (12-99)||(38811168-38811256)
chr3 (315-347)||(45861122-45861154)
chr3 (315-347)||(51961031-51961063)
[»] chr8 (35 HSPs)
chr8 (11-273)||(22907214-22907476)
chr8 (10-347)||(16193643-16193980)
chr8 (11-395)||(16404852-16405235)
chr8 (22-347)||(24928716-24929043)
chr8 (11-347)||(43373392-43373731)
chr8 (107-273)||(5238184-5238350)
chr8 (107-273)||(24661248-24661414)
chr8 (107-273)||(43685643-43685809)
chr8 (15-239)||(6774280-6774505)
chr8 (15-239)||(24548986-24549211)
chr8 (22-273)||(17345581-17345832)
chr8 (315-395)||(274766-274846)
chr8 (315-395)||(641003-641083)
chr8 (315-395)||(826809-826889)
chr8 (315-395)||(24716714-24716794)
chr8 (11-239)||(21844594-21844824)
chr8 (11-239)||(21851987-21852217)
chr8 (11-239)||(30120722-30120952)
chr8 (11-198)||(222754-222943)
chr8 (11-198)||(736377-736566)
chr8 (11-198)||(860272-860461)
chr8 (315-395)||(39115598-39115678)
chr8 (141-239)||(16674414-16674512)
chr8 (28-122)||(23837214-23837308)
chr8 (331-388)||(17285543-17285600)
chr8 (331-388)||(21198005-21198062)
chr8 (315-347)||(5238404-5238436)
chr8 (315-347)||(22907128-22907160)
chr8 (315-347)||(24385652-24385684)
chr8 (315-347)||(24661162-24661194)
chr8 (315-347)||(43685863-43685895)
chr8 (11-52)||(16674603-16674644)
chr8 (315-347)||(2545265-2545297)
chr8 (315-347)||(3431176-3431208)
chr8 (315-347)||(22886654-22886686)
[»] chr4 (35 HSPs)
chr4 (11-273)||(26680201-26680463)
chr4 (11-395)||(54118120-54118507)
chr4 (11-347)||(13246430-13246769)
chr4 (11-347)||(15675009-15675352)
chr4 (141-347)||(122020-122226)
chr4 (107-273)||(10488659-10488825)
chr4 (107-273)||(16327926-16328092)
chr4 (75-347)||(10104170-10104449)
chr4 (11-245)||(31115629-31115864)
chr4 (11-239)||(10644219-10644449)
chr4 (126-273)||(13048221-13048368)
chr4 (211-347)||(33240901-33241043)
chr4 (315-395)||(25119059-25119139)
chr4 (11-109)||(111395-111493)
chr4 (315-395)||(5682380-5682460)
chr4 (11-239)||(47357654-47357884)
chr4 (241-347)||(31132545-31132657)
chr4 (11-56)||(10104449-10104494)
chr4 (315-388)||(41165808-41165881)
chr4 (75-257)||(40885570-40885753)
chr4 (35-122)||(15109486-15109573)
chr4 (28-122)||(41166083-41166177)
chr4 (331-388)||(47534933-47534990)
chr4 (315-347)||(14952085-14952117)
chr4 (315-347)||(15135907-15135939)
chr4 (315-347)||(15272211-15272243)
chr4 (315-347)||(16327840-16327872)
chr4 (315-347)||(16609013-16609045)
chr4 (315-347)||(26680517-26680549)
chr4 (35-122)||(15044851-15044938)
chr4 (29-122)||(13809647-13809740)
chr4 (11-64)||(40885745-40885798)
chr4 (10-122)||(52265645-52265758)
chr4 (315-347)||(8045272-8045304)
chr4 (315-347)||(16523146-16523178)
[»] chr1 (24 HSPs)
chr1 (11-398)||(41394222-41394610)
chr1 (11-347)||(20931345-20931682)
chr1 (11-347)||(20445679-20446019)
chr1 (11-347)||(20913037-20913367)
chr1 (11-347)||(37844374-37844714)
chr1 (11-347)||(20531444-20531783)
chr1 (107-273)||(51452589-51452755)
chr1 (11-347)||(20893551-20893889)
chr1 (15-255)||(2116258-2116500)
chr1 (11-221)||(22227809-22228020)
chr1 (11-221)||(22232506-22232717)
chr1 (315-395)||(21860334-21860414)
chr1 (315-389)||(44034829-44034903)
chr1 (141-239)||(45051554-45051652)
chr1 (281-388)||(27675086-27675191)
chr1 (315-395)||(41218728-41218808)
chr1 (11-239)||(18601140-18601370)
chr1 (11-239)||(5072410-5072640)
chr1 (331-388)||(13376711-13376768)
chr1 (331-388)||(20177513-20177570)
chr1 (15-56)||(45051446-45051487)
chr1 (315-348)||(45051726-45051759)
chr1 (315-346)||(15861327-15861358)
chr1 (315-347)||(51452809-51452841)
[»] scaffold0078 (3 HSPs)
scaffold0078 (11-273)||(37066-37328)
scaffold0078 (315-395)||(41632-41712)
scaffold0078 (315-347)||(36980-37012)
[»] chr7 (46 HSPs)
chr7 (11-273)||(7293017-7293279)
chr7 (11-388)||(3059966-3060344)
chr7 (13-347)||(16211768-16212103)
chr7 (11-347)||(13036938-13037277)
chr7 (16-347)||(11580661-11580997)
chr7 (11-347)||(36052667-36053003)
chr7 (107-273)||(11516324-11516490)
chr7 (107-273)||(15441564-15441730)
chr7 (107-273)||(30262129-30262295)
chr7 (11-273)||(47481031-47481294)
chr7 (11-258)||(18253850-18254098)
chr7 (11-238)||(16478985-16479213)
chr7 (11-272)||(13321014-13321278)
chr7 (141-273)||(25292338-25292470)
chr7 (315-395)||(32493898-32493978)
chr7 (315-395)||(126738-126818)
chr7 (11-239)||(13572676-13572906)
chr7 (11-239)||(13911046-13911277)
chr7 (315-395)||(1936869-1936949)
chr7 (315-395)||(111121-111201)
chr7 (11-239)||(10989410-10989639)
chr7 (281-388)||(13377819-13377924)
chr7 (11-239)||(2437457-2437687)
chr7 (316-395)||(7283908-7283987)
chr7 (331-388)||(13389693-13389750)
chr7 (35-122)||(13377552-13377639)
chr7 (14-345)||(295893-296224)
chr7 (315-347)||(2029244-2029276)
chr7 (315-347)||(7293333-7293365)
chr7 (315-347)||(11516544-11516576)
chr7 (315-347)||(14113903-14113935)
chr7 (315-347)||(15441478-15441510)
chr7 (278-347)||(15709428-15709501)
chr7 (332-388)||(16919870-16919926)
chr7 (315-347)||(30262043-30262075)
chr7 (315-347)||(42056188-42056220)
chr7 (231-273)||(14113989-14114031)
chr7 (231-273)||(14423639-14423681)
chr7 (29-122)||(13274804-13274897)
chr7 (29-122)||(49047811-49047904)
chr7 (315-347)||(371417-371449)
chr7 (315-347)||(3049905-3049937)
chr7 (315-347)||(13321334-13321366)
chr7 (315-343)||(15516765-15516793)
chr7 (315-347)||(25124450-25124482)
chr7 (315-347)||(47480944-47480976)
[»] chr2 (34 HSPs)
chr2 (11-395)||(19794581-19794967)
chr2 (11-395)||(20627190-20627576)
chr2 (11-347)||(36982364-36982704)
chr2 (11-395)||(43642833-43643220)
chr2 (16-347)||(462743-463075)
chr2 (11-347)||(8891242-8891581)
chr2 (11-347)||(24341309-24341652)
chr2 (107-273)||(19689401-19689567)
chr2 (107-273)||(23820168-23820334)
chr2 (107-273)||(14906440-14906606)
chr2 (107-273)||(20015108-20015274)
chr2 (11-273)||(25265390-25265653)
chr2 (11-221)||(7507896-7508107)
chr2 (141-273)||(17396653-17396784)
chr2 (251-347)||(22863169-22863267)
chr2 (315-395)||(22275045-22275125)
chr2 (315-395)||(22284278-22284358)
chr2 (316-395)||(15633538-15633617)
chr2 (11-239)||(19886683-19886913)
chr2 (331-388)||(43646232-43646289)
chr2 (315-348)||(19689314-19689347)
chr2 (315-347)||(9652796-9652828)
chr2 (315-347)||(14906354-14906386)
chr2 (336-388)||(19660221-19660273)
chr2 (315-347)||(23820388-23820420)
chr2 (315-346)||(25213372-25213403)
chr2 (315-388)||(19666848-19666921)
chr2 (331-388)||(25305769-25305826)
chr2 (281-388)||(31146032-31146138)
chr2 (315-347)||(7507757-7507789)
chr2 (315-347)||(17396567-17396599)
chr2 (315-347)||(20015328-20015360)
chr2 (315-347)||(28031134-28031166)
chr2 (315-347)||(33128372-33128404)
[»] scaffold0023 (3 HSPs)
scaffold0023 (11-347)||(48598-48935)
scaffold0023 (11-239)||(36093-36323)
scaffold0023 (315-347)||(61122-61154)
[»] scaffold0266 (2 HSPs)
scaffold0266 (11-347)||(1124-1462)
scaffold0266 (13-347)||(3508-3843)
[»] scaffold0077 (2 HSPs)
scaffold0077 (11-348)||(36836-37176)
scaffold0077 (316-395)||(15319-15398)
[»] scaffold0195 (2 HSPs)
scaffold0195 (11-344)||(19206-19543)
scaffold0195 (11-273)||(21290-21553)
[»] scaffold0001 (2 HSPs)
scaffold0001 (22-347)||(171916-172242)
scaffold0001 (22-347)||(177619-177945)
[»] chr5 (35 HSPs)
chr5 (11-347)||(23506965-23507302)
chr5 (11-347)||(27182471-27182810)
chr5 (11-347)||(18530988-18531330)
chr5 (11-347)||(22053753-22054096)
chr5 (107-273)||(20623066-20623232)
chr5 (107-273)||(21233528-21233694)
chr5 (107-273)||(16536294-16536460)
chr5 (110-273)||(37052844-37053007)
chr5 (107-271)||(25900408-25900571)
chr5 (22-273)||(34939289-34939540)
chr5 (11-239)||(4200007-4200237)
chr5 (11-261)||(18777992-18778244)
chr5 (11-239)||(22366503-22366733)
chr5 (11-239)||(25426628-25426858)
chr5 (141-239)||(29188306-29188404)
chr5 (11-261)||(43443395-43443647)
chr5 (143-239)||(27009975-27010071)
chr5 (11-239)||(12374-12604)
chr5 (11-239)||(19499899-19500129)
chr5 (11-239)||(21073617-21073847)
chr5 (316-390)||(11584374-11584448)
chr5 (15-58)||(29190479-29190522)
chr5 (315-388)||(5450695-5450768)
chr5 (11-52)||(17471803-17471844)
chr5 (331-388)||(21222462-21222519)
chr5 (315-347)||(16105967-16105999)
chr5 (315-347)||(20623286-20623318)
chr5 (315-347)||(21233442-21233474)
chr5 (11-122)||(23493917-23494029)
chr5 (315-347)||(25900320-25900352)
chr5 (315-347)||(37053061-37053093)
chr5 (11-52)||(27009841-27009882)
chr5 (315-347)||(108728-108760)
chr5 (315-347)||(9730278-9730310)
chr5 (315-347)||(16536514-16536546)
[»] scaffold0175 (1 HSPs)
scaffold0175 (11-347)||(882-1218)
[»] scaffold0106 (1 HSPs)
scaffold0106 (15-347)||(41733-42066)
[»] scaffold0413 (1 HSPs)
scaffold0413 (11-347)||(5990-6326)
[»] scaffold0008 (2 HSPs)
scaffold0008 (11-347)||(128095-128431)
scaffold0008 (11-239)||(31697-31928)
[»] scaffold0302 (1 HSPs)
scaffold0302 (11-347)||(12115-12450)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-347)||(272031-272362)
[»] scaffold0162 (3 HSPs)
scaffold0162 (11-347)||(26340-26678)
scaffold0162 (11-273)||(8180-8440)
scaffold0162 (331-388)||(6877-6934)
[»] chr6 (35 HSPs)
chr6 (22-347)||(23153458-23153786)
chr6 (15-346)||(14626045-14626377)
chr6 (11-273)||(35009439-35009702)
chr6 (22-273)||(1657748-1657999)
chr6 (15-348)||(1650020-1650352)
chr6 (22-273)||(15862484-15862734)
chr6 (278-347)||(23148266-23148335)
chr6 (315-395)||(19983144-19983224)
chr6 (315-395)||(35015009-35015089)
chr6 (11-233)||(25175563-25175787)
chr6 (315-395)||(18583640-18583720)
chr6 (11-239)||(27654005-27654235)
chr6 (11-114)||(27740838-27740941)
chr6 (331-388)||(21623506-21623563)
chr6 (75-273)||(29665937-29666137)
chr6 (28-121)||(18381821-18381914)
chr6 (331-388)||(22361619-22361676)
chr6 (316-388)||(14152632-14152704)
chr6 (11-55)||(16825962-16826006)
chr6 (315-347)||(18002395-18002427)
chr6 (315-347)||(23995247-23995279)
chr6 (315-347)||(26090059-26090091)
chr6 (190-258)||(27751605-27751673)
chr6 (315-346)||(4991396-4991427)
chr6 (317-347)||(15742120-15742150)
chr6 (11-64)||(29665892-29665945)
chr6 (315-347)||(1657661-1657693)
chr6 (315-347)||(15862789-15862821)
chr6 (315-347)||(18823283-18823315)
chr6 (315-347)||(18839138-18839170)
chr6 (11-98)||(22361926-22362014)
chr6 (11-122)||(25367374-25367486)
chr6 (315-347)||(27751742-27751774)
chr6 (28-88)||(29605466-29605526)
chr6 (315-347)||(32276659-32276691)
[»] scaffold0498 (1 HSPs)
scaffold0498 (11-347)||(8878-9215)
[»] scaffold0012 (2 HSPs)
scaffold0012 (22-347)||(247366-247694)
scaffold0012 (315-347)||(34075-34107)
[»] scaffold0218 (1 HSPs)
scaffold0218 (11-337)||(4996-5324)
[»] scaffold0018 (1 HSPs)
scaffold0018 (141-345)||(51110-51314)
[»] scaffold0141 (4 HSPs)
scaffold0141 (107-273)||(26892-27058)
scaffold0141 (107-266)||(22637-22796)
scaffold0141 (315-347)||(22857-22889)
scaffold0141 (315-347)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (107-273)||(1582-1748)
scaffold0124 (315-347)||(1496-1528)
[»] scaffold0011 (1 HSPs)
scaffold0011 (11-347)||(123087-123427)
[»] scaffold0025 (3 HSPs)
scaffold0025 (11-347)||(8849-9192)
scaffold0025 (11-299)||(148721-149012)
scaffold0025 (227-347)||(146818-146938)
[»] scaffold0028 (3 HSPs)
scaffold0028 (141-347)||(89378-89586)
scaffold0028 (223-347)||(107708-107834)
scaffold0028 (315-346)||(130880-130911)
[»] scaffold0049 (2 HSPs)
scaffold0049 (11-266)||(48187-48443)
scaffold0049 (316-395)||(20493-20572)
[»] scaffold0026 (3 HSPs)
scaffold0026 (11-258)||(107747-107995)
scaffold0026 (11-204)||(64585-64780)
scaffold0026 (216-261)||(89860-89905)
[»] scaffold0132 (3 HSPs)
scaffold0132 (11-273)||(13506-13769)
scaffold0132 (315-395)||(42677-42754)
scaffold0132 (315-347)||(13824-13856)
[»] scaffold0125 (2 HSPs)
scaffold0125 (11-273)||(41648-41911)
scaffold0125 (307-347)||(41957-41997)
[»] scaffold1542 (1 HSPs)
scaffold1542 (11-273)||(534-797)
[»] scaffold0215 (2 HSPs)
scaffold0215 (15-257)||(9353-9596)
scaffold0215 (15-257)||(16251-16494)
[»] scaffold0075 (1 HSPs)
scaffold0075 (11-273)||(34460-34724)
[»] scaffold0529 (1 HSPs)
scaffold0529 (15-239)||(2966-3192)
[»] scaffold0772 (2 HSPs)
scaffold0772 (141-266)||(5660-5785)
scaffold0772 (315-347)||(5846-5878)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-221)||(5256-5466)
[»] scaffold0034 (1 HSPs)
scaffold0034 (315-395)||(80187-80267)
[»] scaffold0076 (1 HSPs)
scaffold0076 (11-238)||(42997-43226)
[»] scaffold0016 (3 HSPs)
scaffold0016 (314-395)||(166116-166197)
scaffold0016 (314-389)||(162036-162111)
scaffold0016 (315-388)||(116410-116483)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-221)||(3722-3934)
[»] scaffold0184 (1 HSPs)
scaffold0184 (315-395)||(31132-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (315-389)||(5735-5809)
scaffold0686 (315-389)||(5941-6015)
[»] scaffold0622 (1 HSPs)
scaffold0622 (11-109)||(9382-9480)
[»] scaffold0139 (2 HSPs)
scaffold0139 (11-239)||(21138-21367)
scaffold0139 (11-239)||(14083-14312)
[»] scaffold0420 (1 HSPs)
scaffold0420 (141-239)||(13347-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (141-239)||(167-265)
scaffold0116 (315-395)||(30417-30497)
[»] scaffold0342 (1 HSPs)
scaffold0342 (314-395)||(304-385)
[»] scaffold1164 (1 HSPs)
scaffold1164 (316-395)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (316-395)||(19802-19881)
scaffold0122 (316-395)||(24106-24185)
[»] scaffold1711 (1 HSPs)
scaffold1711 (141-239)||(1326-1424)
[»] scaffold0876 (1 HSPs)
scaffold0876 (316-386)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (316-390)||(6261-6335)
scaffold0310 (316-353)||(4-41)
[»] scaffold0104 (1 HSPs)
scaffold0104 (11-100)||(48514-48603)
[»] scaffold0507 (1 HSPs)
scaffold0507 (315-388)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (331-388)||(35816-35873)
[»] scaffold1560 (1 HSPs)
scaffold1560 (11-55)||(71-115)
[»] scaffold0066 (2 HSPs)
scaffold0066 (11-221)||(54416-54628)
scaffold0066 (315-347)||(45338-45370)
[»] scaffold1295 (1 HSPs)
scaffold1295 (331-388)||(442-499)
[»] scaffold0053 (1 HSPs)
scaffold0053 (331-388)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (315-348)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (315-347)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (315-347)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (315-347)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (315-347)||(13285-13317)
[»] scaffold0084 (1 HSPs)
scaffold0084 (148-266)||(56106-56226)
[»] scaffold0058 (1 HSPs)
scaffold0058 (315-347)||(57392-57424)
[»] scaffold0032 (3 HSPs)
scaffold0032 (315-347)||(55904-55936)
scaffold0032 (315-347)||(108075-108107)
scaffold0032 (11-88)||(104793-104871)
[»] scaffold0361 (2 HSPs)
scaffold0361 (13-64)||(3210-3261)
scaffold0361 (180-273)||(3360-3453)
[»] scaffold0207 (1 HSPs)
scaffold0207 (304-347)||(18015-18058)
[»] scaffold1272 (1 HSPs)
scaffold1272 (331-388)||(632-689)
[»] scaffold0970 (1 HSPs)
scaffold0970 (28-89)||(2471-2532)
[»] scaffold0483 (1 HSPs)
scaffold0483 (331-388)||(6999-7056)
[»] scaffold0080 (1 HSPs)
scaffold0080 (331-388)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (331-388)||(31357-31414)
[»] scaffold0367 (1 HSPs)
scaffold0367 (315-347)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (315-347)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (315-347)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (315-347)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (315-347)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (315-347)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (315-347)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 348; Significance: 0; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 11 - 398
Target Start/End: Complemental strand, 16744377 - 16743990
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744377 catcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 16744278  T
Q  111 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatt 210  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16744277 caactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttatt 16744178  T
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 310  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744177 atcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 16744078  T
Q  311 gatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcca 398  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  16744077 gatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 16743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 17912744 - 17912483
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| |||||||  |||| || ||| |||||| |||| ||| ||||||||||||||||    
T  17912744 catcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaatt 17912645  T
Q  111 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatt 210  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||     
T  17912644 caactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatc 17912545  T
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  17912544 atcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 22 - 347
Target Start/End: Original strand, 13838905 - 13839232
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    ||||||||||||||||||| ||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| |||||| |||| |||||     
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  122 tgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | |||| |||||||||| |||| ||||||||||    
T  13839005 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 13839104  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 319  Q
    | ||||||||||||||||| ||||| |||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13839105 gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgat 13839204  T
Q  320 tatgataaagactaacccccttacctta 347  Q
    |||||| |||||||||||||||||||||    
T  13839205 tatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 14842824 - 14842487
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||  | |||||  |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  14842824 catcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 14842725  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| ||||||||||| |||| || ||| ||| | ||||||||||||||| ||||    
T  14842724 taacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattat 14842625  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
      |||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||| ||||     
T  14842624 cttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaag 14842525  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  14842524 tgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 2049810 - 2050147
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | | ||||||||| |||| ||||| | ||||| |    
T  2049810 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaat 2049909  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| ||||||||||| || ||||||| | |||||||||| |||| ||||    
T  2049910 taacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattat 2050009  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||| | ||||||||||||| ||| ||||| |||||||||||| ||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  2050010 catcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaa 2050109  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2050110 tgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 12030410 - 12030073
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | |||||  |||| || | | | ||||||||| |||||||||| |  |||| |    
T  12030410 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaat 12030311  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| |||||||||||| || ||||||| | |||||||||| |||| ||||    
T  12030310 taacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattat 12030211  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||||| ||||| ||||||||||||||||| || ||||||    
T  12030210 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaa 12030111  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||| || ||||||||||||||||    
T  12030110 tgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 310
Target Start/End: Complemental strand, 15859287 - 15858986
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| |||||||    
T  15859287 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatt 15859188  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| || ||||||| | ||||||||||||||| ||||    
T  15859187 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattat 15859088  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||| ||| ||||||||||    
T  15859087 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaa 15858989  T
Q  308 aat 310  Q
    |||    
T  15858988 aat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 10 - 283
Target Start/End: Complemental strand, 51158282 - 51158008
Alignment:
Q  10 acatcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| ||||||    
T  51158282 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 51158183  T
Q  110 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||    
T  51158182 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 51158083  T
Q  209 ttatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaatt 283  Q
    | ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||    
T  51158082 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 211 - 395
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 307  Q
    ||||||||||| ||| ||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  308 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 15936890 - 15936642
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||| || ||||| |||||||||  |||||||  |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  15936890 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 15936791  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| ||||||||||| |||| || ||||||| | ||||||||||||||| ||||    
T  15936790 taacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 15936691  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaattta 258  Q
     ||||||||||| ||||||||||||||| | ||||| ||||||||||||    
T  15936690 catcaattcatgcatacaaacatatcattacagttggagcacgaattta 15936642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 15938729 - 15938484
Alignment:
Q  14 catcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaa 113  Q
    ||||||||||||||||||||||| || ||||| |||||||||  |||||||  |||| |||| | ||||||||||| |||||||||| | ||||| | ||    
T  15938729 catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa 15938630  T
Q  114 ctacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattat 212  Q
    | ||||| | ||||| |||| | |||  |||||||||||| ||||| ||||||||||| |||| || ||||||| | ||||||||||||||| |||| ||    
T  15938629 caacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcat 15938530  T
Q  213 caattcatggatacaaacatatcatcaaagttgaagcacgaattta 258  Q
    |||||||||  |||||||||||||| | ||||| |||||| |||||    
T  15938529 caattcatgattacaaacatatcattacagttggagcacgtattta 15938484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 347
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  227 aaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 326  Q
    ||||||||||||| | ||  |||||||||||| ||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  327 aagactaacccccttacctta 347  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 15614838 - 15615053
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  15614838 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 15614937  T
Q  115 tacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||||||||||||| || ||||||| | |||||||||| |||| |||| |||    
T  15614938 aataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatc 15615037  T
Q  214 aattcatggatacaaa 229  Q
    |||||||| |||||||    
T  15615038 aattcatgcatacaaa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  312 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 390  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 273
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    ||||||| |||||||||| |||||||||| |||||||| |||||||   ||||||||||||||| | || | ||||||||| |||| |||||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 13975755  T
Q  241 agttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||| |||||||||||| ||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 273
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    ||||||| |||||||||| |||||||||| |||||||| |||||||   ||||||||||||||| | || | ||||||||| |||| |||||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 45861035  T
Q  241 agttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||| |||||||||||| ||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 126 - 273
Target Start/End: Complemental strand, 13955036 - 13954890
Alignment:
Q  126 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggata 225  Q
    ||||||||| |||  ||||||| |||||||||  |||||||||| |||||||| |||||||   ||||||||||||||| | || | ||||||||| |||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  226 caaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    | |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  13954936 c-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 16821139 - 16821369
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  16821139 catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 16821238  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||||||||||||| || ||||||| | ||||||||||||||| |||    
T  16821239 caacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16821338  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
    | ||||||| ||| ||||||||||| |||||    
T  16821339 tcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 47984650 - 47984759
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47984650 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47984749  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  47984750 caacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 48003224 - 48003333
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48003224 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48003323  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  48003324 caacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 376
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  315 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 376  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 47993937 - 47994046
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||| |||| ||  |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47993937 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47994036  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  47994037 caacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 48012510 - 48012619
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||| |||| ||  |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48012510 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48012609  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  48012610 caacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 55316219 - 55316449
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||  | |  ||  | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  55316219 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 55316318  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  55316319 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 55316418  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  55316419 acatcaattcatgcatacaaacataacatca 55316449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 41270075 - 41270305
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||  | |  ||  | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  41270075 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 41270174  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||||| ||||| | || |||||||   |||||||||||||||  ||    
T  41270175 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaacta 41270274  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  41270275 acatcaattcatgcatacaaacataacatca 41270305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 15468596 - 15468555
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  15468596 catcatcaattcatgaatatgcatacccaagcaatgattcat 15468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 388
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  333 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 15615137 - 15615170
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaa 348  Q
    ||||||||||||||||||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 22275209 - 22275250
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    |||||||||| |||||||||||||||| ||||||||||||||    
T  22275209 catcatcaattcatgaatatgcatacctaagcaatgattcat 22275250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 6228849 - 6228796
Alignment:
Q  35 acccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaatt 88  Q
    |||||||| |||| |||||||| |||| |||| |||||| ||||||||||||||    
T  6228849 acccaagccatgaatcatcaacaacaatatttcttagcaacaacaacatcaatt 6228796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 11329191 - 11329098
Alignment:
Q  29 atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||||||||| |||| | |||| | |||||||   |||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  11329191 atgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 11329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 13955153 - 13955112
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||    
T  13955153 catcaacaatccatgaatatgcaaacccaagcaattattcat 13955112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 13975985 - 13975944
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||    
T  13975985 catcaacaatccatgaatatgcaaacccaagcaattattcat 13975944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  216 ttcatggatacaaacatatcatcaaagttgaagcacgaattt 257  Q
    |||||| ||||||||||||||||| ||||| |||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 381  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 17139525 - 17139618
Alignment:
Q  29 atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||||||||| |||| | |||| | |||||||   |||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  17139525 atgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 17139618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 45860805 - 45860846
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||    
T  45860805 catcaacaatccatgaatatgcaaacccaagcaattattcat 45860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 38811256 - 38811168
Alignment:
Q  12 atcatcaatccatgaat-atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatc 99  Q
    ||||||||  ||||||| ||||| |||||||| |||| |||||| | |||||||   |||||| ||||||||||||||| ||| |||||    
T  38811256 atcatcaaaacatgaattatgcacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatc 38811168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 22907476 - 22907214
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22907476 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 22907377  T
Q  111 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||    
T  22907376 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 22907277  T
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  22907276 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 10 - 347
Target Start/End: Complemental strand, 16193980 - 16193643
Alignment:
Q  10 acatcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||| | |||||     
T  16193980 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 16193881  T
Q  110 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
    | ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| |  |||||||||||||| |||    
T  16193880 ttaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaatta 16193781  T
Q  209 ttatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 308  Q
    | ||||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||    
T  16193780 tcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaa 16193681  T
Q  309 atgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  16193680 atgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 395
Target Start/End: Complemental strand, 16405235 - 16404852
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||| |||||  |||| || ||| ||||||||||| ||||||||||||  ||||||    
T  16405235 catcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatt 16405136  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | ||||| || ||||||| | ||||||||||||||| ||||    
T  16405135 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 16405039  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||| ||| |||||| ||   ||||||||||||||||||||||||||||||    
T  16405038 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttacaa 16404939  T
Q  308 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    | | |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  16404938 a-taatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 22 - 347
Target Start/End: Complemental strand, 24929043 - 24928716
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    ||||||||||||||||||||||||||||||||||  |||||||  |||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||     
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  122 tgtc-aaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  | ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | ||||||||||||||| |||| ||||||||||    
T  24928943 tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 24928844  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 319  Q
    | |||||||||||| |||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  24928843 gcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgat 24928744  T
Q  320 tatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||| ||||||||    
T  24928743 tatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 43373731 - 43373392
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||  |||| || | | | ||||||||| |||||||||| | ||||| |    
T  43373731 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaat 43373632  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||| | ||||    
T  43373631 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattat 43373532  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| |||||||| |||||||| ||||| |||||||||||| ||  ||| |||||| ||   |||||||||||||||||||||| || ||||    
T  43373531 catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaa 43373432  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43373431 aatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 239
Target Start/End: Complemental strand, 6774505 - 6774280
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||  | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  6774505 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 6774406  T
Q  115 tacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| |||    
T  6774405 aataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 6774306  T
Q  214 aattcatggatacaaacatatcatca 239  Q
    |||||||| ||||||||||| |||||    
T  6774305 aattcatgcatacaaacataacatca 6774280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 24548986 - 24549211
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  24548986 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 24549085  T
Q  115 tacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| |||    
T  24549086 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 24549185  T
Q  214 aattcatggatacaaacatatcatca 239  Q
    |||||||| ||||||||||| |||||    
T  24549186 aattcatgcatacaaacataacatca 24549211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 17345581 - 17345832
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||| || ||| || ||||| || |||||||||||| ||||||||| | | |||     
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
Q  122 tgtcaaattc-atccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| || ||| |||  ||||||||||||||||||  |||||||||||| || || |||| || | ||||||||||||||| |||| ||||||||||    
T  17345680 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 17345779  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    | ||| ||||||| ||||| ||||  |||||||||||  ||||||| ||||||    
T  17345780 gcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 21844824 - 21844594
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||| ||||| | ||||| |    
T  21844824 catcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaaaaatcacatctcaaat 21844725  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||| | |    
T  21844724 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatca 21844625  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
    | ||||||||||| ||||||||||| |||||    
T  21844624 tcatcaattcatgcatacaaacataacatca 21844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 21852217 - 21851987
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  21852217 catcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacatctcaaat 21852118  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| ||||||||||||||||||| || |||| | ||||||||||||||| | |    
T  21852117 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatca 21852018  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
    | ||||||||||| ||||||||||| |||||    
T  21852017 tcatcaattcatgcatacaaacataacatca 21851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 30120722 - 30120952
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  30120722 catcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 30120821  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  30120822 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 30120921  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      || |||||||| ||||||||||| |||||    
T  30120922 acataaattcatgcatacaaacataacatca 30120952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 222943 - 222754
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  222943 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 222844  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaat 198  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||    
T  222843 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 736566 - 736377
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  736566 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 736467  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaat 198  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||    
T  736466 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 860461 - 860272
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  860461 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 860362  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaat 198  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||    
T  860361 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 16674512 - 16674414
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatca 239  Q
    ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||  || |||||||| ||| ||||||| |||||    
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatca 16674414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 23837214 - 23837308
Alignment:
Q  28 tatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||| |||||||||| |||| |||||||| |||||||   |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837214 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 16674644 - 16674603
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    ||||||||||||||||||||||| || |||||||| ||||||    
T  16674644 catcatcaatccatgaatatgcaaactcaagcaattattcat 16674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 26680201 - 26680463
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26680201 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 26680300  T
Q  111 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatt 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  26680301 caactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattatt 26680400  T
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  26680401 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 395
Target Start/End: Complemental strand, 54118507 - 54118120
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| || |||     
T  54118507 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataactaaatc 54118408  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| || ||||||| | ||||||||||||||| ||||    
T  54118407 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattat 54118308  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| | ||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  54118307 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 54118208  T
Q  308 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  54118207 aataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 13246430 - 13246769
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| ||||||     
T  13246430 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 13246529  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | ||||||||||||||| ||||    
T  13246530 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 13246629  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
     || |||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  13246630 cattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 13246729  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13246730 aatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 15675352 - 15675009
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  15675352 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 15675253  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| ||||    
T  15675252 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 15675153  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  15675152 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 15675053  T
Q  308 a----atgatgatgattatgataaagactaacccccttacctta 347  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  15675052 aaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 141 - 347
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    |||||||||||| ||||| |||||||||||||||| || ||||||| | |||||||||| |||| |||| ||||||||||| |||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  241 agttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 340  Q
    ||||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  341 tacctta 347  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 75 - 347
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
Q  75 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatat 173  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||||||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  174 ttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcca- 272  Q
    || || ||||||| | ||||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||| ||||| ||||||| |||||     
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
Q  273 -taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 347  Q
     ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 31115629 - 31115864
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  31115629 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 31115728  T
Q  111 caactacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| | |  ||||||| | |||  ||| |||||||| |||||  |||||||||||| |  || ||||||| | ||||||||||||||| ||||    
T  31115729 caacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattat 31115828  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttg 245  Q
     ||||||||||| ||||||||||||||||| |||||    
T  31115829 catcaattcatgcatacaaacatatcatcacagttg 31115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 10644219 - 10644449
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  10644219 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 10644318  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||||||||||||| || ||||||| | || |||||||||||| |||    
T  10644319 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaatta 10644418  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
    | ||||||||||| ||||||||||| |||||    
T  10644419 tcatcaattcatgcatacaaacataacatca 10644449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 126 - 273
Target Start/End: Complemental strand, 13048368 - 13048221
Alignment:
Q  126 aaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggata 225  Q
    ||||||||| |||  ||||||| |||||||||| || |||||||||||||||| ||||||| | ||||||||||||||| | || ||||| ||||| |||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  226 caaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||  |||||| |||| ||||||| ||||||| ||||||    
T  13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 308  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  309 ----atgatgatgattatgataaagactaacccccttacctta 347  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 111395 - 111493
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| ||||||    
T  111395 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 47357654 - 47357884
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  47357654 catcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 47357753  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  47357754 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 47357853  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      |||||| |||| ||||||||||| |||||    
T  47357854 acatcaatccatgcatacaaacataacatca 47357884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  241 agttgaagcacgaatttaacaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 334  Q
    ||||| |||||||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  335 cccccttacctta 347  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 10104494 - 10104449
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaac 56  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  10104494 catcatcaattcatgaatatgtatacccaagcaatgattcatcaac 10104449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 257
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  75 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacata- 172  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  173 tttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttgaagcacgaattt 257  Q
    ||| || ||||||| | |||||||| ||| || |||| | ||||||||| ||||||||||| || || ||||| || ||||||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 15109573 - 15109486
Alignment:
Q  35 acccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||| |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15109573 acccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15109486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
Q  28 tatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||| |||||||||| ||||||||||||| |||||||   |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166177 tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
Q  35 acccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||| |||| |||||| | |||||||   |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 13809740 - 13809647
Alignment:
Q  29 atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    ||||||| |||||| |||| | |||| | |||||||  ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13809740 atgcatatccaagccatgaattatcatcaacaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 40885798 - 40885745
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacat 64  Q
    ||||| |||| || ||||||||||||| |||| ||||||||||||| |||||||    
T  40885798 catcaccaattcaagaatatgcatacctaagccatgattcatcaacaacaacat 40885745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 52265758 - 52265645
Alignment:
Q  10 acatcatcaatccatgaat-atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaa 108  Q
    ||||||||||  ||||||| ||| | |||||||| |||| ||||||||  ||| ||   |||||| ||||||||||||||| ||| ||||| || | |||    
T  52265758 acatcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 52265659  T
Q  109 ttcaactacaacat 122  Q
    |||||| |||||||    
T  52265658 ttcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 398
Target Start/End: Original strand, 41394222 - 41394610
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||||||| || |||||||||||| |||||||  | || || ||| |||||||||||  ||||||||| | |||||      
T  41394222 catcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaca 41394321  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||  | ||||||||||||||| ||||    
T  41394322 taacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattat 41394421  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||| ||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394422 catcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 41394521  T
Q  310 tgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcca 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  41394522 tgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 41394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 20931345 - 20931682
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||| |||||||  |||| || | | ||||||||||| |||||||||| | ||||| |    
T  20931345 catcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 20931444  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||||||||||| | || ||||||| | |||||||||| |||| ||||    
T  20931445 taacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20931544  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||||| |||| ||||||||||| |||||||||| |||||    
T  20931545 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaa 20931644  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  20931645 tgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 20445679 - 20446019
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | |||||||||||  ||||||||||| | |||||    
T  20445679 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20445778  T
Q  111 caactacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || || || ||||||| | ||||||||||||||| ||||    
T  20445779 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20445878  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaattt-aca 306  Q
     ||||||||||| ||||||||||||||||| | ||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||| |||    
T  20445879 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcaca 20445978  T
Q  307 aaatgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20445979 aaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 20913037 - 20913367
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||| ||  |||| || | | ||||||||||| ||||||||||      ||||    
T  20913037 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca------aatt 20913130  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||||||||||| | || ||||||| | |||||||||| |||| ||||    
T  20913131 -aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20913229  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||| ||| |||||||||||||||| |||||||||| |||||    
T  20913230 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaa 20913329  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||| |||||||| |||||||||||||||||||||||||    
T  20913330 tgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 37844714 - 37844374
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||| |||||||  |||| || | | ||||||||||| |||||||||||| ||||||     
T  37844714 catcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatc 37844615  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttt-tcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |||| |||||  |||  ||||||||||||  | ||| |||||| | | || || || ||||||| | ||||||||||||||| |||    
T  37844614 taacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatta 37844515  T
Q  209 ttatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttaca 306  Q
    | ||||||||||| ||||||||||||||||| ||||| |||| ||||||| ||||||| |||||| ||   ||||||||||||||||||||||||| |||    
T  37844514 tcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcaca 37844415  T
Q  307 aaatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37844414 aaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 20531444 - 20531783
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | |||||||||||  ||||||||||| | |||||    
T  20531444 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20531543  T
Q  111 caactacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || || || ||||||| | ||||||||||||||| ||||    
T  20531544 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20531643  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| |||||||||||| |||| | ||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  20531644 catcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 20531743  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||   ||||||||||    
T  20531744 aatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 20893889 - 20893551
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||| |||||||  |||| ||   | ||||||||||| ||||||||||||  |||||     
T  20893889 catcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatc 20893790  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | | ||||||||||||| ||||    
T  20893789 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattat 20893690  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| ||||| |||| ||||||| ||||||| |||||| ||   ||||||||||||||||||||||| ||||||    
T  20893689 catcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaa 20893591  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20893590 aatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 15 - 255
Target Start/End: Original strand, 2116258 - 2116500
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagc-tcaattcaa 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | |||||||||||  ||||||||| |   |||| | ||    
T  2116258 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaaattaa 2116357  T
Q  114 ctacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattat 212  Q
    | | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| ||    
T  2116358 caataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 2116457  T
Q  213 caattcatggatacaaacatatcatcaaagttgaagcacgaat 255  Q
    ||||||||| ||||||||||| ||||| |||  ||||||||||    
T  2116458 caattcatgcatacaaacataacatcacagtaaaagcacgaat 2116500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 22227809 - 22228020
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | |||||  |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22227809 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22227908  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||   ||||||||||||||||| |||||||||||||||| || ||||||| | || |||||||||||| ||||    
T  22227909 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22228008  T
Q  210 tatcaattcatg 221  Q
     |||||||||||    
T  22228009 catcaattcatg 22228020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 22232506 - 22232717
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | |||||  |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22232506 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22232605  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||   ||||||||||||||||| |||||||||||||||| || ||||||| | || |||||||||||| ||||    
T  22232606 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22232705  T
Q  210 tatcaattcatg 221  Q
     |||||||||||    
T  22232706 catcaattcatg 22232717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 389  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 45051554 - 45051652
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatca 239  Q
    |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| ||||||||||| |||||||| || |||||    
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatca 45051652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  281 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 380  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  381 agctccta 388  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 41218728 - 41218808
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 18601370 - 18601140
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||  | |  ||  | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  18601370 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 18601271  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  18601270 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 18601171  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  18601170 acatcaattcatgcatacaaacataacatca 18601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 5072640 - 5072410
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||  | |  ||  | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  5072640 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 5072541  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  5072540 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 5072441  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||| ||||||| |||||    
T  5072440 acatcaattcatgcatataaacataacatca 5072410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 45051446 - 45051487
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaac 56  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  45051446 atcaattcatgaatatgcatacccaagcagtgattcatcaac 45051487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 45051726 - 45051759
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaa 348  Q
    ||||||||||||||||||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 346
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  315 atgattatgataaagactaacccccttacctt 346  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 215; Significance: 1e-118; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 37328 - 37066
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  37328 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatc 37229  T
Q  111 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |||||    
T  37228 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 37129  T
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 7293017 - 7293279
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7293017 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 7293116  T
Q  111 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatt 210  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||    
T  7293117 caacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 7293216  T
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    || |||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  7293217 attaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 388
Target Start/End: Original strand, 3059966 - 3060344
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| ||   | ||||||||||| |||||||||||| ||||||     
T  3059966 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatc 3060065  T
Q  111 caactacaacatgtcaaa-ttcatccatttt-gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |||| |||| ||||||  ||| |||||||| || || |||||||||||||||| || ||||||| | ||||||| |  |||| |||    
T  3060066 taacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatta 3060164  T
Q  209 ttatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 308  Q
    | ||||||| ||| ||||||| |||| |||| ||||| |||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  3060165 tcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaa 3060264  T
Q  309 atgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  3060265 atgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 347
Target Start/End: Original strand, 16211768 - 16212103
Alignment:
Q  13 tcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattca 112  Q
    |||| ||| |||||||||||||||||||||||||| |||||||| |||||||  |||| || | | ||||||||||  |||||||||| | ||||| | |    
T  16211768 tcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaatta 16211867  T
Q  113 actacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatta 211  Q
    || ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||| ||| | || ||||||| |||| |||| |    
T  16211868 acaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatca 16211967  T
Q  212 tcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 311  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||  ||||||| ||||||||||||||||||||||| || ||||||||    
T  16211968 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatg 16212067  T
Q  312 atgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||||||||    
T  16212068 atgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 13037277 - 13036938
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||  ||||  ||  | ||||| ||||| |||||||||||| ||||||     
T  13037277 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatc 13037178  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||| ||| | | ||||||||||||| ||||    
T  13037177 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattat 13037078  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  13037077 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 13036978  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  13036977 aatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 347
Target Start/End: Complemental strand, 11580997 - 11580661
Alignment:
Q  16 tcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 115  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  11580997 tcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 11580898  T
Q  116 acaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatca 214  Q
    ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | ||||||||||||||| |||| ||||    
T  11580897 acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatca 11580798  T
Q  215 attcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaat 310  Q
    ||||||| |||||||||||| |||| ||||| |||||||||||| ||| ||| |||||| ||    |||||||||||||||||||||||||||| |||||    
T  11580797 attcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaat 11580698  T
Q  311 gatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11580697 gatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 36052667 - 36053003
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||  |||| || | ||||||||||||| |||||||||| | ||||| |    
T  36052667 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaat 36052766  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||| | ||||    
T  36052767 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattat 36052863  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| |||||||| |||||||| ||||| || |  |||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36052864 catcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaa 36052963  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36052964 aatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 47481294 - 47481031
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | |||||  ||||  | | | ||||||||||| |||||||||||| |||||||    
T  47481294 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaatt 47481195  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||||||||||||| || ||||||| | || |||||||||||| ||||    
T  47481194 caacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 47481095  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     ||||||||||| ||||||||||| ||||| ||||  |||||||||||| ||||||| ||||||    
T  47481094 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 18254098 - 18253850
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||| || ||||| |||||||||  |||||||  |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  18254098 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 18253999  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||||||||||| |||| || ||||||| | ||||||||||||||| ||||    
T  18253998 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 18253899  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaattta 258  Q
     ||||||||||| ||||||||||||||| | ||||| ||||||||||||    
T  18253898 catcaattcatgcatacaaacatatcattacagttggagcacgaattta 18253850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 16479213 - 16478985
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||  | || || ||| |||||||||||  ||||||||| | ||||| |    
T  16479213 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaat 16479114  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| ||||    
T  16479113 taaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 16479014  T
Q  210 tatcaattcatggatacaaacatatcatc 238  Q
     ||||||||||| ||||||||||| ||||    
T  16479013 catcaattcatgcatacaaacataacatc 16478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 13321014 - 13321278
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||| |||| |||||||  ||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  13321014 catcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 13321113  T
Q  111 caacta-caacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatattt--aaaaatgtaatctaaccaacaatcatacact 206  Q
    |||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  ||| ||||||| | ||||||||||||||| |    
T  13321114 caacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaat 13321212  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcca 272  Q
    ||| ||||||||||| ||||||||||| ||||| ||||  |||||||||||| ||||||| |||||    
T  13321213 tatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 273
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    ||||||| |||||| ||| || |||||||||||||||| ||||||| | ||||||||||||||| | || | ||||||||  ||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  241 agttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||| ||||| |||||| ||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 13572676 - 13572906
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||| ||||||||||||||||| ||||||||||| |||||| ||  | || ||  | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  13572676 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 13572775  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| ||||||||||||||||||| ||||||| | ||||||||||| ||| | |    
T  13572776 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatca 13572875  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
    | ||||||||||| ||||||||||| |||||    
T  13572876 tcatcaattcatgcatacaaacataacatca 13572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 13911277 - 13911046
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||  | || ||  | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  13911277 catcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 13911178  T
Q  111 caactacaacat---gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactt 207  Q
    |||| ||||| |   |  ||||||| | |||  ||| ||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||||||||| ||    
T  13911177 caacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaatt 13911078  T
Q  208 attatcaattcatggatacaaacatatcatca 239  Q
    |  ||||||||||| ||||||||||| |||||    
T  13911077 aacatcaattcatgcatacaaacataacatca 13911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 10989410 - 10989639
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  10989410 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 10989509  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     | | ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  10989510 ta-caacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 10989608  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  10989609 acatcaattcatgcatacaaacataacatca 10989639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  281 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 380  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  381 agctccta 388  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 2437457 - 2437687
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| || |||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||  |    
T  2437457 catcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcaaatctcatat 2437556  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||   |||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  2437557 taacaacaacttaggaaaaattcaccaattgaacacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 2437656  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  2437657 acatcaattcatgcatacaaacataacatca 2437687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 13377552 - 13377639
Alignment:
Q  35 acccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||| |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  13377552 acccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 13377639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 345
Target Start/End: Complemental strand, 296224 - 295893
Alignment:
Q  14 catcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattc-a 112  Q
    |||||||||||||||| |||||||||| || | |||||||||| ||| || ||| |||   ||||||||||||||| ||| |||||| | | |||||| |    
T  296224 catcaatccatgaataagcatacccaatcagtaattcatcaacaacatcaattaatag---caacaacatcaattgaacatgaatcacaacacaattcaa 296128  T
Q  113 actacaacat-gtcaaattcatccattttg-cacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatt 210  Q
    ||  |||  | |  ||||||| |||||| |  | |||||| ||||||| ||||||||||||| || || ||| ||| | |||||||||||||   ||||     
T  296127 acatcaatttagcaaaattca-ccatttggatataatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatc 296029  T
Q  211 atcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaa 308  Q
    ||| ||||||| | ||||||||| || |  | ||  | |||||||||| ||||||| || ||| || ||||| |||||||||  |||||||||  | |||    
T  296028 atcgattcatgcacacaaacataacacctcaattagaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaa 295930  T
Q  309 atgatgatgattatgataaagactaacccccttacct 345  Q
    |||||||  |||||| | ||||| |||||||||||||    
T  295929 atgatgagaattatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  278 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  332 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  231 atatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  231 atatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 13274804 - 13274897
Alignment:
Q  29 atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    ||||||||| |||| |||| |||||| | |||||||   |||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13274804 atgcataccaaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13274897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 49047904 - 49047811
Alignment:
Q  29 atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||||||||| |||| | |||| | |||||||   |||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  49047904 atgcatacccaagccatgaattatcagcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 49047811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 343
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  315 atgattatgataaagactaacccccttac 343  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 395
Target Start/End: Complemental strand, 19794967 - 19794581
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| |   || ||||||||||| |||||||||||| |||||||    
T  19794967 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaatt 19794868  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | ||||||||||||||| ||||    
T  19794867 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 19794768  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| ||   |||||||||||||||||||||| |||||||    
T  19794767 tatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttgaaa-tttacaa 19794669  T
Q  308 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  19794668 aataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 11 - 395
Target Start/End: Complemental strand, 20627576 - 20627190
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||   |||| || | | || |||||||| |||||||| | | ||||| |    
T  20627576 catcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaat 20627477  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || ||||||||||||||||  | ||||||| | ||||||||||||||| ||||    
T  20627476 taacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattat 20627377  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaa 308  Q
     |||||||| || ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  20627376 catcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaa 20627277  T
Q  309 atgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  20627276 atgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 36982704 - 36982364
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  36982704 catcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaatt 36982605  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | |||| ||||| |||| ||||    
T  36982604 caacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattat 36982505  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 306  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  36982504 catcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 36982405  T
Q  307 aaatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36982404 aaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 11 - 395
Target Start/End: Complemental strand, 43643220 - 43642833
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||| || ||| | ||||||||| |||||||||||| ||||| |    
T  43643220 catcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaat 43643121  T
Q  111 caactacaac-atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | ||||| || ||||||| | ||||||||||||||| ||||    
T  43643120 taataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 43643021  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| | ||| ||||| |||||| ||||||| |||||  ||   ||||||||||||||||||||||||| ||||    
T  43643020 catcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaa 43642921  T
Q  308 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  43642920 aatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 347
Target Start/End: Original strand, 462743 - 463075
Alignment:
Q  16 tcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 115  Q
    ||||| ||||||||||||||||||||||||||||||||||  || ||||  |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  462743 tcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 462842  T
Q  116 acaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatca 214  Q
    ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||||||||||||| || ||||||| | |||||||||| |||| |||| ||||    
T  462843 acaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatca 462942  T
Q  215 attcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatg 314  Q
    ||||||| ||||||| ||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  462943 attcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatg 463042  T
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 8891242 - 8891581
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||  ||||  | | | ||||||||||| |||||||||||| ||||||     
T  8891242 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 8891341  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| |  |||||||||||||| ||||    
T  8891342 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattat 8891441  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| |||||||||||| |||| ||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  8891442 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 8891541  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  8891542 aatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 24341652 - 24341309
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||   |||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  24341652 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 24341553  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || || |||| | ||||||||||||||| ||||    
T  24341552 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattat 24341453  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| |||||||||| ||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  24341452 catcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 24341353  T
Q  308 a----atgatgatgattatgataaagactaacccccttacctta 347  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  24341352 aaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 25265653 - 25265390
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||  |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  25265653 catcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 25265554  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| ||||    
T  25265553 caacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 25265454  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     ||||||||||| ||||||||||| ||||||||||  |||||||||||| ||||||| ||||||    
T  25265453 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 7508107 - 7507896
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgca-caagaatcatagctcaat 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||  | || || ||| ||||||||||  | || |||||||| ||||||    
T  7508107 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 7508008  T
Q  110 tcaactacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
    | ||| ||||| | | |||||||| | |||   ||||||||||||||||| | |||||||||||||| || ||||||| | ||||||||||||||| |||    
T  7508007 t-aacaacaacttagccaaattcaccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 7507909  T
Q  209 ttatcaattcatg 221  Q
    | |||||||||||    
T  7507908 tcatcaattcatg 7507896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 273
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    ||||||| |||||||||| |||||||||| |||||||| ||||||| | ||||||||||||||| | || | ||||||||| |||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  241 agttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||| |||||||||||| ||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  251 cgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||| ||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 19886913 - 19886683
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  19886913 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 19886814  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| ||| |||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  19886813 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 19886714  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  19886713 acatcaattcatgcatacaaacataacatca 19886683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaa 348  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  336 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 346
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  315 atgattatgataaagactaacccccttacctt 346  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  281 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 379  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  380 tagctccta 388  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 174; Significance: 2e-93; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 48598 - 48935
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  ||||  | | | ||||||||||| |||||||||||| ||||||     
T  48598 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 48697  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||||| | ||||| || ||||||| | ||||||||||||||| ||||    
T  48698 tagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattat 48797  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  48798 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 48897  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48898 tgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 36093 - 36323
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | |  ||  | || |||  | |||||| |||| ||| |||||| | ||||| |    
T  36093 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataacatctattgaacatgaatcacatctcaaat 36192  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  36193 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaacta 36292  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||  ||||||||||| |||||    
T  36293 acatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 171; Significance: 1e-91; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 1124 - 1462
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||| |||| ||  |||| || | | ||||||||||| |||||||||| | ||||| |    
T  1124 catcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 1223  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| ||||    
T  1224 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1323  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaa 308  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||| |||||    
T  1324 tatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaa 1423  T
Q  309 atgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1424 atgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 13 - 347
Target Start/End: Complemental strand, 3843 - 3508
Alignment:
Q  13 tcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattca 112  Q
    |||||||||||| |||||||||||||||||||| |||| ||||  |||||||  |||| |||| | ||||||||||| |||||||||| | ||||| | |    
T  3843 tcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaatta 3744  T
Q  113 actacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttatta 211  Q
    || ||||| |  |||| || | | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| |    
T  3743 acaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatca 3644  T
Q  212 tcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 311  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  3643 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatg 3544  T
Q  312 atgatgattatgataaagactaacccccttacctta 347  Q
    | ||||||||||| ||||||||||||||||||||||    
T  3543 aagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 170; Significance: 4e-91; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 37176 - 36836
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||| ||||||| |||||| ||||| ||||||     
T  37176 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatc 37077  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||||||||||||| || ||||||| | |||||||| | |||| ||||    
T  37076 caaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattat 36977  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36976 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaa 36877  T
Q  308 aatgatgatgattatgataaagactaacccccttaccttaa 348  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36876 aatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 19206 - 19543
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  19206 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 19305  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | |||||||||| |||| ||||    
T  19306 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 19405  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 306  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  19406 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 19505  T
Q  307 aaatgatgatgattatgataaagactaacccccttacc 344  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  19506 aaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 21290 - 21553
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  21290 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 21389  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | |||||||||| |||| ||||    
T  21390 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 21489  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||    
T  21490 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 163; Significance: 6e-87; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 22 - 347
Target Start/End: Original strand, 171916 - 172242
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||||||||| |||||||||||||||||| |||||||  |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  122 tgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| || ||||||| | |||| |||||||||| |||| ||||||||||    
T  172016 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 320  Q
      ||||||||||||||||| ||||| |||||| ||||| ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  172116 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 172215  T
Q  321 atgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||    
T  172216 atgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 22 - 347
Target Start/End: Original strand, 177619 - 177945
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||||||||| |||||||||||||||||| |||||||  |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  122 tgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| || ||||||| | |||| |||||||||| |||| ||||||||||    
T  177719 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 320  Q
      ||||||||||||||||| ||||| |||||| ||||| ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  177819 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 177918  T
Q  321 atgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||    
T  177919 atgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 2e-86; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 23506965 - 23507302
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||  |||| || | | ||||||||||| |||||||||| | ||||| |    
T  23506965 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 23507064  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| ||||    
T  23507065 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 23507164  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| |  || |||||||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  23507165 catcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaa 23507264  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||  ||||||||||||||||||||||||||||||||||    
T  23507265 tggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 27182810 - 27182471
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| ||||||     
T  27182810 catcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 27182711  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | | ||||||||||||| ||||    
T  27182710 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattat 27182611  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 307  Q
     |||| |||||| ||||||||||||||||| ||||| |||| ||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  27182610 catcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 27182511  T
Q  308 aatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27182510 aatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 18531330 - 18530988
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  18531330 catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 18531231  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||   ||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| ||||    
T  18531230 caacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 18531131  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||| || || ||| |||||||| ||||||||||| || |||    
T  18531130 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaa 18531031  T
Q  308 aatgatgat---gattatgataaagactaacccccttacctta 347  Q
    |||||||||   ||||||||| |||||||||||||||||||||    
T  18531030 aatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 22054096 - 22053753
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| | |||||||||||||||||||||| |||||||  |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  22054096 catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 22053997  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || ||||||| | |||||||||||||||  |||    
T  22053996 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactat 22053897  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||  ||||||||||||||||| ||||| |||||||||||| ||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  22053896 catcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaa 22053797  T
Q  308 a----atgatgatgattatgataaagactaacccccttacctta 347  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  22053796 aaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 110 - 273
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  110 tcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 107 - 271
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcc 271  Q
    ||| ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 34939289 - 34939540
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||| || ||| |||||||| || |||||||||||| ||||||||| | |  ||     
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
Q  122 tgtcaaattc-atccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| || ||| |||  ||||||||||||||||||  |||||||||||| || || |||| || | ||||||||||||||| |||| ||||||||||    
T  34939388 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 34939487  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    | ||||||||||| ||||| ||||  |||||||||||| ||||| | ||||||    
T  34939488 gcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 4200237 - 4200007
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  4200237 catcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 4200138  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
    |||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  4200137 caacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 4200038  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  4200037 acatcaattcatgcatacaaacataacatca 4200007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 261
Target Start/End: Complemental strand, 18778244 - 18777992
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | ||  ||  | ||||||| ||| |||||||||| | ||||| |    
T  18778244 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaat 18778145  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  18778144 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 18778045  T
Q  209 ttatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaaca 261  Q
      ||||||||||| ||||||||||| ||||| ||    |||||||||||||||    
T  18778044 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaaca 18777992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 22366733 - 22366503
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  22366733 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaat 22366634  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  22366633 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 22366534  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  22366533 acatcaattcatgcatacaaacataacatca 22366503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 25426628 - 25426858
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25426628 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25426727  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  25426728 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25426827  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  25426828 acatcaattcatgcatacaaacataacatca 25426858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 29188404 - 29188306
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatca 239  Q
    |||| ||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| ||||||||||| ||||||||||| |||||    
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 29188306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 261
Target Start/End: Complemental strand, 43443647 - 43443395
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||| ||| | ||||| |    
T  43443647 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagactcacatctcaaat 43443548  T
Q  111 caactacaacatgtca--aattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
    |||| ||||| |   |  |||||| | |||  ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||    
T  43443547 caacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 43443448  T
Q  209 ttatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaaca 261  Q
      ||||||||||| ||||||||||| ||||| ||    |||||||||||||||    
T  43443447 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaaca 43443395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 27009975 - 27010071
Alignment:
Q  143 acaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatca 239  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||| | ||||||| ||||||| | || ||||||||||| ||||||||||| |||||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatca 27010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 12374 - 12604
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  12374 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 12473  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| ||| |||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  12474 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 12573  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  12574 acatcaattcatgcatacaaacataacatca 12604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 19499899 - 19500129
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  19499899 catcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 19499998  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  19499999 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 19500098  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| ||||||||||| |||||    
T  19500099 acatcaattcatgcatacaaacataacatca 19500129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 21073847 - 21073617
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  21073847 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaat 21073748  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| |||||  |    ||||||| |  ||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  21073747 taacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 21073648  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||| ||||||| ||||||||||| |||||    
T  21073647 acatccattcatgcatacaaacataacatca 21073617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 390
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 390  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 29190522 - 29190479
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaacta 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  29190522 atcaattcatgaatatgcatacccaagcaatgattcatcaacta 29190479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 17471844 - 17471803
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  17471844 catcatcaattcatgaatatgcgtacccaagcaatgattcat 17471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 23493917 - 23494029
Alignment:
Q  11 catcatcaatccatgaat-atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    |||||||||  ||||||| ||| | |||||||| |||| |||||| | |||||||   |||||| ||||||||||||||| ||| ||||| || | ||||    
T  23493917 catcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 23494016  T
Q  110 tcaactacaacat 122  Q
    ||||| |||||||    
T  23494017 tcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 27009841 - 27009882
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcat 52  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||    
T  27009841 catcaacaatccatgaatatgcaaacccaagcaattattcat 27009882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 1218 - 882
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | |||||  |||| |||| | ||||||| ||| |||||||| | | |||||||    
T  1218 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaatt 1119  T
Q  111 caactacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| | |  ||||||||| |||  |||||||||||| ||||| | |||||||||||||| || ||||||| | ||||||||||||||| ||||    
T  1118 -aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1020  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||  |||     
T  1019 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaag 920  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  919 tgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 347
Target Start/End: Original strand, 41733 - 42066
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||||   |||| || | | | ||||||||| |||||||||||| ||||||  |||    
T  41733 atcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaac 41832  T
Q  115 tacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     ||||| |  |||| |||| | |||  |||||||||||| || || |||||||||||||||| |  ||||||| | |||||||||   ||| |||| |||    
T  41833 aacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatc 41932  T
Q  214 aattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 313  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41933 aattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgat 42032  T
Q  314 gatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||| |||||||||||||||    
T  42033 gatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 6326 - 5990
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | ||||   |||| |||| | ||||||| ||| |||||||||| | |||||||    
T  6326 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaatt 6227  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||||||||||||| || ||||||| | ||||||||||||||| ||||    
T  6226 -aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 6128  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||| ||||     
T  6127 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaag 6028  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    |||  |||||||||||||||||||||||||||||||||    
T  6027 tgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 128431 - 128095
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||  |||||||  |||| |||| | ||||||||||| |||||||||| | |||||||    
T  128431 catcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctcaatt 128332  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||  | |||  |||||||||||| |||||  ||  |||||| |||| || ||||||| | |||||||||| |||| ||||    
T  128331 -aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattat 128233  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||| |||||    
T  128232 catcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaa 128133  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  128132 tgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 31928 - 31697
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  31928 catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatgaatcacatctcaaat 31829  T
Q  111 caactacaacat---gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactt 207  Q
    |||| ||||| |   |  ||||||| | |||  ||| ||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  |    
T  31828 caacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaact 31729  T
Q  208 attatcaattcatggatacaaacatatcatca 239  Q
    |  ||||||||||| || |||||||| |||||    
T  31728 aacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 12115 - 12450
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||  | |||||  |||| |||  | ||||||||||| |||||||||| | |||||||    
T  12115 catcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaatt 12214  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
      || ||||| |  |||| |||| | |||| |||||||||||| ||||| ||||||||||| ||||||| ||||| | | ||||||||||||||| ||||    
T  12215 --acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattat 12312  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaa 308  Q
     ||||||||||| ||||||||||||||||| ||||  |||||||||||| ||||||| |||||||||||||| |||||||| |||||| ||| |||||||    
T  12313 catcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaa 12411  T
Q  309 atgatgatgattatgataaagactaacccccttacctta 347  Q
    || | ||||||||||||||||||||||||||||||||||    
T  12412 attaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 347
Target Start/End: Original strand, 272031 - 272362
Alignment:
Q  17 caatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta 116  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | |||| |||||| |||||||||||| |||||| |||| |    
T  272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
Q  117 caacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaa 215  Q
    |||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| || ||||||| |  ||| |||||||||| |||| |||||    
T  272131 caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa 272230  T
Q  216 ttcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatga 315  Q
    |||||  ||||||||||||||| | ||||| || ||| ||||| ||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  272231 ttcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatga 272330  T
Q  316 tgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||||||||||||    
T  272331 tgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 143; Significance: 5e-75; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 26678 - 26340
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||  |||||||  |||| || | | ||||||||||| |||||||||||| |||| |     
T  26678 catcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 26579  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||||||||||||| || ||||| | | ||||| |||| |||| ||||    
T  26578 taacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattat 26479  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaa 308  Q
     ||||||||| | ||||||||||||||||||||||| |||||||||||| ||||||| || ||| || |||| |||||||||||||||||||||||||||    
T  26478 catcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaa 26379  T
Q  309 atgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26378 atgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 8440 - 8180
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||| |||||||||||||||| ||||||||| ||| |||||||  |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  8440 catcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 8341  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    ||||   |||||  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || ||  |||||| | ||||||||||||||| ||||    
T  8340 caac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattat 8244  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     | ||||||||| ||||||||||| ||||| ||||  |||||||||||| ||||||| ||||||    
T  8243 caccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 22 - 347
Target Start/End: Original strand, 23153458 - 23153786
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| ||||||||| |||||||||||||| |||||||  |||| || | | || |||||||| |||||||||||| ||||||  ||| |||||     
T  23153458 catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact 23153557  T
Q  122 tgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | ||||||||||||||| |||| ||||||||||    
T  23153558 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 23153657  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatga 318  Q
    | ||||||||||||||||| ||||| ||||||||||||  |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  23153658 gcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 23153757  T
Q  319 ttatgataaagactaacccccttacctta 347  Q
    ||||||| |||||||||||||||||||||    
T  23153758 ttatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 346
Target Start/End: Complemental strand, 14626377 - 14626045
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | |||||||||||  ||||||||| | ||||| | |||    
T  14626377 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaac 14626278  T
Q  115 tacaacatgtca-aattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     ||||| |  || |||||| | |||   ||||||||||||||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| |||    
T  14626277 aacaacttagcataattcaccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 14626178  T
Q  214 aattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 313  Q
    |||||||| ||||||||||| ||||| ||    |||||||||||| ||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| |||     
T  14626177 aattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaa 14626078  T
Q  314 gatgattatgataaagactaacccccttacctt 346  Q
    ||||||| ||||||  |||||||||||||||||    
T  14626077 gatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 35009702 - 35009439
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  35009702 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 35009603  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| ||||    
T  35009602 caacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 35009503  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     ||||||||||| |||||||| || ||||| ||||  |||||||||||| ||||||| ||||||    
T  35009502 catcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 1657999 - 1657748
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||| || ||| |||||||| || |||||||||||| ||||||||| | | |||     
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
Q  122 tgtcaaattc-atccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| || ||| |||  ||||||||||||||||||  |||||||||||| || || |||| || | ||||||||||||||| |||| ||||||||||    
T  1657900 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 1657801  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    | || |||||||| ||||| ||||  |||||||||||| ||||||| ||||||    
T  1657800 gcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 348
Target Start/End: Complemental strand, 1650352 - 1650020
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||  | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  1650352 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 1650253  T
Q  115 tacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| ||||| |||||||||| || ||||||| | ||||||||||||||| |||| |||    
T  1650252 cataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 1650153  T
Q  214 aattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatga 312  Q
    |||||||| |||||||| || ||||| |||   ||||||||| || ||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |    
T  1650152 aattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta 1650055  T
Q  313 tgatgattatgataaagactaacccccttaccttaa 348  Q
      ||||||||||||||||||||||||||||||||||    
T  1650054 -catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 15862484 - 15862734
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | |||     
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
Q  122 tgtcaaattc-atccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| || ||| |||  ||||||||||||||||||  ||||| |||||| || || |||| || | ||||||||||||||| |||| ||||||||||    
T  15862582 tagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 15862681  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    | ||||||||||| ||||| ||||  ||||||||||||  |||||| ||||||    
T  15862682 gcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  278 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 25175563 - 25175787
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25175563 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25175662  T
Q  111 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  25175663 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25175762  T
Q  209 ttatcaattcatggatacaaacata 233  Q
      ||||||||||| |||||||||||    
T  25175763 acatcaattcatgcatacaaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 27654235 - 27654005
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  | || ||  | || |||  | ||||||| | | |||||||||| | ||||| |    
T  27654235 catcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaat 27654136  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||||| ||||| | || ||||||| | ||||||||| |||||  ||    
T  27654135 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 27654036  T
Q  209 ttatcaattcatggatacaaacatatcatca 239  Q
      ||||||||||| |||||| |||| |||||    
T  27654035 acatcaattcatgcatacaagcataacatca 27654005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 27740838 - 27740941
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||| | |||||||||| || |||||||    ||  | |||| |||||||||| ||| |||||||| |||||||    
T  27740838 catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt 27740937  T
Q  111 caac 114  Q
    ||||    
T  27740938 caac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
Q  75 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatat 173  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  174 tt--aaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcc 271  Q
    ||  ||| ||||||| | ||| ||||||||||| |||| ||||||||||  |||  || ||| ||||| || |  |||||||||||||||||||| ||||    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  272 at 273  Q
    ||    
T  29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 18381914 - 18381821
Alignment:
Q  28 tatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||| |||||||||| |||| |||||||| |||||||   |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381914 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 16826006 - 16825962
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaa 55  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||    
T  16826006 catcatcaatccatgaatatgcataacaaagcaattattcatcaa 16825962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 27751605 - 27751673
Alignment:
Q  190 accaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttgaagcacgaattta 258  Q
    ||||||||||||||| || | ||||||||||| ||||||||||| ||||| | ||  ||||||||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaattta 27751673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 346
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  315 atgattatgataaagactaacccccttacctt 346  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  317 gattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 29665892 - 29665945
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacat 64  Q
    ||||| |||||||||||||||||||||||||  |||||||| | || |||||||    
T  29665892 catcaccaatccatgaatatgcatacccaagtcatgattcacccacaacaacat 29665945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 22362014 - 22361926
Alignment:
Q  11 catcatcaatccatgaat-atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaat 98  Q
    |||||||||| ||||||| ||| | |||||||| |||| |||||||| |||| ||   |||||| ||||||||||||||| ||| ||||    
T  22362014 catcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 25367486 - 25367374
Alignment:
Q  11 catcatcaatccatgaat-atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    ||||| |||| ||||||| ||||| |||||||| |||| | ||| |  |||||||   |||||| ||||||||||||||| ||| ||||| || | ||||    
T  25367486 catcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 25367387  T
Q  110 tcaactacaacat 122  Q
    ||||| |||||||    
T  25367386 tcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 29605466 - 29605526
Alignment:
Q  28 tatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaatt 88  Q
    |||||| |||||| | |||| |||||||| |||| |||| |||||| ||||||||||||||    
T  29605466 tatgcacacccaaaccatgaatcatcaacaacaatatttcttagcaacaacaacatcaatt 29605526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 138; Significance: 5e-72; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 8878 - 9215
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  |||||||  |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  8878 catcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 8977  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || ||||||| | |||||||||| |||| ||||    
T  8978 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattat 9077  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 309  Q
     ||| ||||||| ||||||||||| ||||| |  || |||||||||||| |||||||  ||||||| |||||||| |||||| ||||||||||| |||||    
T  9078 catcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaa 9177  T
Q  310 tgatgatgattatgataaagactaacccccttacctta 347  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  9178 tgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 22 - 347
Target Start/End: Complemental strand, 247694 - 247366
Alignment:
Q  22 catgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||| ||   | ||||||||||| |||||||||||| ||||||  ||| |||||     
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  122 tgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcat 220  Q
    |  |||| || | | |||  |||||||||||| ||||| |||||| | | ||||| || ||| ||| | |||  |||||||||| |||| ||||||||||    
T  247594 tagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcat 247495  T
Q  221 ggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatga 318  Q
    | ||||||||||||||| | ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  247494 gcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 247395  T
Q  319 ttatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||    
T  247394 ttatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 337
Target Start/End: Complemental strand, 5324 - 4996
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||  |||||||  |||| || | | ||||||||||| |||||||||||| |||| |     
T  5324 catcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 5225  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||| | | |||||||||| |||| ||||    
T  5224 taacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattat 5125  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaa 308  Q
     ||||||||| | ||||||||||||| ||| ||||| || ||||||||| ||||||| |||||| ||  |||||||||||||||||||||||||||||||    
T  5124 catcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaa 5025  T
Q  309 atgatgatgattatgataaagactaaccc 337  Q
    ||||| |||||||||||||||||||||||    
T  5024 atgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 141 - 345
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    |||||||||||| ||||| |||||||||| ||||| || ||||||| | |||||||||| |||| |||| ||||||||||| ||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  241 agttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 340  Q
    ||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  341 tacct 345  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 127; Significance: 2e-65; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaat 266  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacact 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  207 tattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 126; Significance: 7e-65; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 123427 - 123087
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||||||||||||||| || |||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| || |||     
T  123427 catcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatc 123328  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| || ||||||| | ||||||||||||||| ||||    
T  123327 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 123228  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 306  Q
     ||||||||||| ||||||||||||||||| | ||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||| |||||||| |    
T  123227 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaa 123128  T
Q  307 aaatgatgatgattatgataaagactaacccccttacctta 347  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  123127 aaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 120; Significance: 3e-61; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 8849 - 9192
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||  ||||  | ||| ||||||||||| |||  ||||||| |||||||    
T  8849 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt 8948  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| ||||    
T  8949 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 9048  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 307  Q
     ||||||||||| ||||||||||||||||| || || |||||||||||| ||||||| |||||  ||   ||||| ||||| ||||||||||| || |||    
T  9049 catcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaa 9148  T
Q  308 a----atgatgatgattatgataaagactaacccccttacctta 347  Q
    |    ||||||||||||||||| ||||||||| | |||||||||    
T  9149 aaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 11 - 299
Target Start/End: Original strand, 148721 - 149012
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| ||||| |  |||| || | | ||||||||||| |||||||||| | ||||| |    
T  148721 catcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 148820  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||||||||||||| || ||||||| | |||||||||| |||| ||||    
T  148821 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 148920  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaa 299  Q
     ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||| || ||   ||||||||||||||||||||||    
T  148921 catcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 347
Target Start/End: Original strand, 146818 - 146938
Alignment:
Q  227 aaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 326  Q
    |||||| |||||| | || ||||| |||||||  |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146818 aaacatgtcatcataattaaagcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 146917  T
Q  327 aagactaacccccttacctta 347  Q
    |||||||||||||||||||||    
T  146918 aagactaacccccttacctta 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 106; Significance: 6e-53; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 141 - 347
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    |||||||||||| ||||| | |||| | | ||||| || ||||||| | ||||||||||||||| |||| ||||||||||| ||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  241 agttgaagcacgaatttaacaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 338  Q
    ||||| |||||||||||| ||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  339 cttacctta 347  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 223 - 347
Target Start/End: Complemental strand, 107834 - 107708
Alignment:
Q  223 atacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgatt 320  Q
    ||||||| ||||||||| ||||| |||||||||||| ||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||     
T  107834 atacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatc 107735  T
Q  321 atgataaagactaacccccttacctta 347  Q
    ||||| |||||||||||||||||||||    
T  107734 atgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 346
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  315 atgattatgataaagactaacccccttacctt 346  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 266
Target Start/End: Original strand, 48187 - 48443
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||  |||||||  |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  48187 catcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaat 48286  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||||||||||| |||| || ||||||| | ||||||||||||||| ||||    
T  48287 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 48386  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaat 266  Q
     ||||||||||| ||||||||||||||| | ||||| |||||||||||| |||||||    
T  48387 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 107747 - 107995
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  |||||||  |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  107747 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 107846  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||||| || |||| || ||||||| | ||||||||||||||| ||||    
T  107847 taacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattat 107946  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaattta 258  Q
     ||||||||||| ||||||||||||||| | ||||| ||||||||||||    
T  107947 catcaattcatgcatacaaacatatcattacagttggagcacgaattta 107995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 64780 - 64585
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||| ||||||||||||||||| ||||||||||| |||||| ||  | || ||  | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  64780 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 64681  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcataca 204  Q
     ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| ||||||||||||||||||| ||||||| | |||||||||||||||    
T  64680 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcataca 64585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 89905 - 89860
Alignment:
Q  216 ttcatggatacaaacatatcatcaaagttgaagcacgaatttaaca 261  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaatttaaca 89860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 96; Significance: 6e-47; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 13506 - 13769
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||||||||||||||||||||  ||||||||||||| |||||||  |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  13506 catcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 13605  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| |||||||  |||| |||||| |||  |||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| ||||    
T  13606 caacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 13705  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     ||||||||||| ||||||||||| ||||||||||  |||||||||||| ||||||| ||||||    
T  13706 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 41648 - 41911
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||   ||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  41648 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt 41747  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
    |||| |||||||  |||| |||| | |||   ||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| ||||    
T  41748 caacaacaacatagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 41847  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     ||||||||||| ||||||||||| ||||| ||||  |||||||||||||||||||| ||||||    
T  41848 catcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  307 aaatgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 797 - 534
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||| |||||||  ||||||| | | ||||||||||  |||||||||||| || |||     
T  797 catcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatc 698  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| || ||||||| | ||||||||||||||| ||||    
T  697 taacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 598  T
Q  210 tatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
     ||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||    
T  597 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 9596 - 9353
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  9596 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 9497  T
Q  115 tacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| |||    
T  9496 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 9397  T
Q  214 aattcatggatacaaacatatcatcaaagttgaagcacgaattt 257  Q
    |||||||| ||||||||||| ||||| ||   ||||||||||||    
T  9396 aattcatgcatacaaacataacatcacagcaaaagcacgaattt 9353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 16494 - 16251
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  16494 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 16395  T
Q  115 tacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatc 213  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| |||    
T  16394 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 16295  T
Q  214 aattcatggatacaaacatatcatcaaagttgaagcacgaattt 257  Q
    |||||||| ||||||||||| ||||| ||   ||||||||||||    
T  16294 aattcatgcatacaaacataacatcacagcaaaagcacgaattt 16251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 34724 - 34460
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgca-caagaatcatagctcaat 109  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||  | || || ||| ||||||||||  | || |||||||| ||||||    
T  34724 catcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 34625  T
Q  110 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
    ||||| ||||| |  |||| |||| | |||  | |||||||||| |||||   ||||||||| | || || ||||||| | ||||||||||||||| |||    
T  34624 tcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaatta 34525  T
Q  209 ttatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    | ||||||||||| ||||||||||| ||||| ||||  |||||||||||| ||| ||| ||||||    
T  34524 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 2966 - 3192
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgca-caagaatcatagctcaattcaa 113  Q
    |||||| ||||||||||||||| |||||| |||||||||||| |||||||  | || || ||| ||||||||||  | || |||||||| ||||||||||    
T  2966 atcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaa 3065  T
Q  114 ctacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattat 212  Q
    | ||||| |  |||| |||| | |||  |||||||||||| |||||  |||||||||||| || || ||||||| | ||||||||||||||| |||| ||    
T  3066 caacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 3165  T
Q  213 caattcatggatacaaacatatcatca 239  Q
    ||||||||||||||||||||| |||||    
T  3166 caattcatggatacaaacataacatca 3192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 141 - 266
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 240  Q
    ||||||| ||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||||| | || ||||||||||| ||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  241 agttgaagcacgaatttaacaacaat 266  Q
    ||||| |||||||||||| |||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 5466 - 5256
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||  |||||||  |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  5466 catcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 5368  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| |||||    |||| |||| | |||   ||||||||||||||||| |||||||||||||||| || ||||||| | ||||||||||||||| ||||    
T  5367 taacaacaactcagcaaaattcaccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 5268  T
Q  210 tatcaattcatg 221  Q
     |||||||||||    
T  5267 catcaattcatg 5256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 42997 - 43226
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | || ||  | || |||  | ||||||| ||| ||| |||||| | ||||| |    
T  42997 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaat 43096  T
Q  111 caactacaacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||||||||||||| || ||||||| | ||||||||||||||| |||    
T  43097 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 43196  T
Q  209 ttatcaattcatggatacaaacatatcatc 238  Q
    | ||||||||||| ||| ||||||| ||||    
T  43197 tcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 395
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  314 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 389
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  314 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 389  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 3722 - 3934
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||  | |||||  |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  3722 catcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 3821  T
Q  111 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcatttt-tacatatttaaaaatgtaatctaaccaacaatcatacactta 208  Q
     ||| ||||| |  |||| |||| | |||   |||||||| |||||||| ||||||| ||||||||| || ||||||| | ||||||||||||||| |||    
T  3822 taacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaatta 3921  T
Q  209 ttatcaattcatg 221  Q
    | |||||||||||    
T  3922 tcatcaattcatg 3934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 389  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 389  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 9382 - 9480
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||| || | | ||||||||||| |||||||||||| ||||||    
T  9382 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 21367 - 21138
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| |||||||||||||||| || |||||||| |||||||||  | |||||  | || |||  | ||||||||||| |||||||||  | ||||| |    
T  21367 catcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattcataacatcaattgaacaagaatccaatctcaaat 21268  T
Q  111 caactacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     ||| ||||| | |  ||||||| | |||  || |||| |||||||||| |||||||||||||||| || ||||||| | || |||||||||| | ||||    
T  21267 taacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattat 21168  T
Q  210 tatcaattcatggatacaaacatatcatca 239  Q
     ||||||| ||||||||||||||| |||||    
T  21167 catcaattaatggatacaaacataacatca 21138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 14312 - 14083
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||||| || |||||||| |||||||||  | |||||  |  | |||  | ||||| ||||| |||||||||  | ||||| |    
T  14312 catcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattcataacattaattgaacaagaatccaatctcaaat 14213  T
Q  111 caactacaacat-gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttat 209  Q
     | | ||||| | |  ||||||| | |||  ||||||| |||||||||| |||||||||||||||| || ||||||| | || |||||||||| | ||||    
T  14212 tatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattat 14113  T
Q  210 tatcaattcatggatacaaacatatcatca 239  Q
     ||||||||||| ||||| ||||| |||||    
T  14112 catcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 13445 - 13347
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatca 239  Q
    |||| ||||||| ||||| |||||||||||||||| || ||||||| | ||||||||||||||| |||| ||||||||||| ||||||||||| |||||    
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 167 - 265
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatca 239  Q
    ||||||| | |||||||| ||||||||||||||||||| ||||||| | ||||||||||||||| | || ||||||||||| ||||||||||| |||||    
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 314 - 395
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  314 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 395  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 1424 - 1326
Alignment:
Q  141 gcacaattttcataacttttcatttttacatatttaaaaatgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatca 239  Q
    ||||||| |||||||||| |||||||| ||||| | || ||||||| | |||||||||||||||  ||  ||||||||||| ||||||||||| |||||    
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 1326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 94 - 164
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 386  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 390  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  316 tgattatgataaagactaacccccttaccttaattatc 353  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 48514 - 48603
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatca 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | |||||  |||| |||| | |||||||| || ||||||||||    
T  48514 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 115 - 71
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaa 55  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  115 catcatcaatccatgaatatgcaaacccaagcaattattcatcaa 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 54416 - 54628
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||| |||||| ||||||||   |||||||| | || |||||||   |||  | ||||||||||||| | ||| |||||| | |||| ||    
T  54416 catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 54515  T
Q  111 caactacaacatgtc-aaattcatccattttgcacaattttcataacttttcatttttacata--tttaaaaatgtaatctaaccaacaatcatacactt 207  Q
    |||| ||||||| || ||||||| | |||  | |||| |||||||||||  ||||| ||||||  || ||| ||| ||| | ||| ||||||||||| ||    
T  54516 caacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaatt 54614  T
Q  208 attatcaattcatg 221  Q
    || |||||||||||    
T  54615 atcatcaattcatg 54628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 442 - 499
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  315 atgattatgataaagactaacccccttaccttaa 348  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0084 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  148 tttcataacttttcatttttacata-tttaaaa-atgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttg 245  Q
    |||||||||||  ||||| |||||| ||||||| ||||||| | | | ||||||||||| |||| ||||| ||||| | || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  246 aagcacgaatttaacaacaat 266  Q
     ||||||||||||||||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 104871 - 104793
Alignment:
Q  11 catcatcaatccatgaat-atgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaatt 88  Q
    |||||||||| ||||||| ||| |||||||||| |||| |||||||| |||| ||   |||||| ||||||||||||||    
T  104871 catcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 3210 - 3261
Alignment:
Q  13 tcatcaatccatgaatatgcatacccaagcaatgattcatcaactacaacat 64  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||  |||||||    
T  3210 tcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacat 3261  T

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Target: scaffold0361; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 3360 - 3453
Alignment:
Q  180 atgtaatctaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttgaagcacgaatttaacaacaatcatccat 273  Q
    ||||||| | |||||||||||||||  ||| || |||||||| |||||||| || ||||| || |  |||||||||||| || |||| ||||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  304 acaaaatgatgatgattatgataaagactaacccccttacctta 347  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 632 - 689
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

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Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 2471 - 2532
Alignment:
Q  28 tatgcatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattg 89  Q
    |||| |||||||||| |||| |||||||| |||||||   |||||| |||||||||||||||    
T  2471 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  331 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 388  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  315 atgattatgataaagactaacccccttacctta 347  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

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