View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5424-Insertion-7 (Length: 612)

Name: NF5424-Insertion-7
Description: NF5424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5424-Insertion-7
NF5424-Insertion-7
[»] chr8 (38 HSPs)
chr8 (8-443)||(35106606-35107041)
chr8 (440-611)||(19176668-19176839)
chr8 (442-612)||(41681132-41681301)
chr8 (440-612)||(12571859-12572032)
chr8 (439-612)||(11656450-11656624)
chr8 (443-612)||(9930034-9930203)
chr8 (442-611)||(31133218-31133387)
chr8 (441-612)||(44831622-44831793)
chr8 (447-612)||(33328161-33328326)
chr8 (448-612)||(13224645-13224808)
chr8 (443-604)||(13225023-13225185)
chr8 (439-611)||(9178014-9178185)
chr8 (441-604)||(19176287-19176451)
chr8 (443-604)||(11656841-11657003)
chr8 (443-604)||(44831246-44831408)
chr8 (439-570)||(34540967-34541098)
chr8 (447-604)||(9928912-9929070)
chr8 (444-593)||(41681529-41681679)
chr8 (440-604)||(33742918-33743082)
chr8 (445-603)||(31133605-31133764)
chr8 (447-604)||(12572235-12572393)
chr8 (446-604)||(33328524-33328683)
chr8 (491-610)||(33743298-33743417)
chr8 (447-612)||(4630169-4630328)
chr8 (442-552)||(11336959-11337069)
chr8 (442-598)||(4629795-4629952)
chr8 (439-582)||(10918121-10918264)
chr8 (443-585)||(8073956-8074097)
chr8 (523-585)||(43958264-43958326)
chr8 (442-477)||(9177665-9177700)
chr8 (441-519)||(35427283-35427361)
chr8 (443-484)||(10919691-10919732)
chr8 (441-497)||(15255850-15255906)
chr8 (439-497)||(6115604-6115662)
chr8 (536-604)||(9177724-9177793)
chr8 (440-489)||(43958205-43958254)
chr8 (430-466)||(14055145-14055181)
chr8 (445-497)||(28254919-28254971)
[»] chr5 (47 HSPs)
chr5 (439-612)||(18183346-18183519)
chr5 (442-612)||(2865132-2865302)
chr5 (444-612)||(8647438-8647606)
chr5 (444-612)||(5819306-5819474)
chr5 (444-612)||(19359136-19359304)
chr5 (439-611)||(15372251-15372423)
chr5 (440-612)||(15708967-15709138)
chr5 (442-606)||(24362219-24362383)
chr5 (443-611)||(29455120-29455288)
chr5 (442-612)||(8460928-8461098)
chr5 (441-612)||(14215620-14215791)
chr5 (439-604)||(8647822-8647988)
chr5 (439-612)||(164568-164741)
chr5 (442-604)||(5818927-5819090)
chr5 (442-604)||(18182968-18183131)
chr5 (442-604)||(19359520-19359683)
chr5 (442-609)||(14463901-14464067)
chr5 (443-604)||(8461315-8461477)
chr5 (446-604)||(2864756-2864915)
chr5 (444-603)||(164191-164350)
chr5 (440-604)||(24331555-24331722)
chr5 (446-604)||(14215243-14215402)
chr5 (450-604)||(24361843-24361997)
chr5 (443-606)||(25000471-25000635)
chr5 (450-604)||(24325218-24325372)
chr5 (443-604)||(29454739-29454901)
chr5 (443-612)||(16018588-16018755)
chr5 (446-609)||(24331940-24332107)
chr5 (442-606)||(16018969-16019134)
chr5 (444-586)||(7349420-7349562)
chr5 (466-611)||(25000112-25000257)
chr5 (439-604)||(15709353-15709518)
chr5 (446-569)||(15371873-15371995)
chr5 (445-570)||(4222142-4222266)
chr5 (444-584)||(4623148-4623286)
chr5 (444-570)||(7348559-7348685)
chr5 (450-582)||(6019177-6019309)
chr5 (444-582)||(4219663-4219800)
chr5 (445-561)||(6018315-6018430)
chr5 (457-583)||(4624631-4624757)
chr5 (495-586)||(13814131-13814226)
chr5 (443-606)||(41834443-41834606)
chr5 (526-570)||(14462686-14462730)
chr5 (442-495)||(15029804-15029857)
chr5 (442-519)||(22651782-22651859)
chr5 (441-497)||(15115585-15115641)
chr5 (543-611)||(28495220-28495288)
[»] scaffold0295 (2 HSPs)
scaffold0295 (441-612)||(4790-4961)
scaffold0295 (446-558)||(5222-5334)
[»] chr3 (69 HSPs)
chr3 (444-612)||(39555954-39556122)
chr3 (442-612)||(31779029-31779199)
chr3 (441-612)||(20840557-20840728)
chr3 (442-612)||(5136978-5137148)
chr3 (443-612)||(23644461-23644630)
chr3 (439-612)||(24300933-24301106)
chr3 (447-612)||(41046703-41046868)
chr3 (443-612)||(37726928-37727097)
chr3 (444-612)||(43973441-43973609)
chr3 (441-599)||(48452986-48453144)
chr3 (443-612)||(27393954-27394123)
chr3 (439-609)||(32535339-32535513)
chr3 (446-612)||(25853604-25853770)
chr3 (439-612)||(30104477-30104649)
chr3 (439-604)||(43973824-43973990)
chr3 (439-604)||(37727314-37727480)
chr3 (439-612)||(26837733-26837905)
chr3 (448-612)||(22425190-22425354)
chr3 (443-604)||(20840945-20841107)
chr3 (443-604)||(39555577-39555739)
chr3 (444-604)||(25853234-25853395)
chr3 (442-604)||(4275748-4275911)
chr3 (440-606)||(29801798-29801965)
chr3 (443-604)||(31778652-31778814)
chr3 (441-604)||(17464488-17464652)
chr3 (440-612)||(26274944-26275115)
chr3 (443-609)||(17464871-17465038)
chr3 (443-604)||(27393660-27393822)
chr3 (441-604)||(5137365-5137529)
chr3 (439-604)||(22424809-22424975)
chr3 (443-604)||(30098147-30098309)
chr3 (447-570)||(32534962-32535085)
chr3 (439-604)||(23644849-23645015)
chr3 (447-585)||(25612381-25612519)
chr3 (442-604)||(26837358-26837521)
chr3 (444-583)||(23228414-23228552)
chr3 (447-604)||(26274570-26274728)
chr3 (444-561)||(29801356-29801473)
chr3 (447-604)||(24300560-24300717)
chr3 (444-586)||(50116812-50116954)
chr3 (445-584)||(32697106-32697244)
chr3 (439-585)||(51474737-51474884)
chr3 (447-604)||(41047083-41047239)
chr3 (442-585)||(37220555-37220698)
chr3 (445-558)||(51473429-51473542)
chr3 (442-582)||(45965936-45966076)
chr3 (446-588)||(25420542-25420684)
chr3 (442-530)||(37222030-37222118)
chr3 (439-540)||(25419139-25419241)
chr3 (463-572)||(18010162-18010271)
chr3 (443-586)||(23227261-23227398)
chr3 (440-612)||(49407792-49407963)
chr3 (441-612)||(27200070-27200240)
chr3 (447-558)||(32695706-32695817)
chr3 (440-612)||(50900906-50901077)
chr3 (441-497)||(52375824-52375880)
chr3 (549-612)||(55192222-55192285)
chr3 (434-612)||(37075676-37075856)
chr3 (447-519)||(22370599-22370671)
chr3 (563-611)||(29801535-29801583)
chr3 (52-159)||(38121810-38121917)
chr3 (443-604)||(51827956-51828117)
chr3 (443-497)||(330329-330383)
chr3 (439-497)||(55390090-55390148)
chr3 (444-497)||(40275093-40275146)
chr3 (441-497)||(2051292-2051348)
chr3 (443-475)||(25611497-25611529)
chr3 (443-495)||(49720856-49720908)
chr3 (441-497)||(52237310-52237366)
[»] chr1 (46 HSPs)
chr1 (443-612)||(50970655-50970824)
chr1 (443-612)||(5540195-5540364)
chr1 (442-609)||(18984117-18984284)
chr1 (443-612)||(15646572-15646741)
chr1 (444-612)||(29306953-29307121)
chr1 (446-612)||(33144296-33144462)
chr1 (443-612)||(29869619-29869788)
chr1 (447-612)||(15173099-15173264)
chr1 (444-612)||(8678919-8679086)
chr1 (447-612)||(5962955-5963120)
chr1 (440-612)||(9018969-9019141)
chr1 (444-612)||(21856420-21856588)
chr1 (442-611)||(26859438-26859606)
chr1 (444-612)||(29307318-29307487)
chr1 (444-609)||(17433216-17433381)
chr1 (440-608)||(9019343-9019512)
chr1 (446-606)||(17433597-17433758)
chr1 (446-607)||(39154021-39154182)
chr1 (442-602)||(50970276-50970437)
chr1 (439-604)||(29870003-29870169)
chr1 (437-570)||(18984538-18984671)
chr1 (440-604)||(21856038-21856203)
chr1 (445-604)||(5539817-5539977)
chr1 (445-604)||(8678542-8678702)
chr1 (445-603)||(4636356-4636515)
chr1 (442-604)||(15173478-15173640)
chr1 (439-604)||(26859054-26859220)
chr1 (443-604)||(39154404-39154566)
chr1 (452-604)||(33143925-33144078)
chr1 (442-604)||(15646190-15646353)
chr1 (443-584)||(52268289-52268430)
chr1 (445-604)||(5962579-5962739)
chr1 (504-612)||(4636033-4636140)
chr1 (439-530)||(2733416-2733507)
chr1 (446-560)||(52269177-52269291)
chr1 (444-604)||(17112282-17112442)
chr1 (446-519)||(47826966-47827039)
chr1 (452-540)||(47827037-47827125)
chr1 (433-606)||(44802555-44802728)
chr1 (444-525)||(50419725-50419806)
chr1 (441-612)||(17088518-17088688)
chr1 (442-505)||(52235153-52235216)
chr1 (443-497)||(29438929-29438983)
chr1 (543-612)||(45048253-45048322)
chr1 (446-495)||(50304441-50304490)
chr1 (447-495)||(17641864-17641912)
[»] chr7 (37 HSPs)
chr7 (442-612)||(19830418-19830588)
chr7 (443-612)||(37786766-37786935)
chr7 (444-612)||(19590525-19590693)
chr7 (442-612)||(35289278-35289448)
chr7 (447-612)||(29100228-29100393)
chr7 (443-612)||(38858642-38858811)
chr7 (442-611)||(34534169-34534338)
chr7 (444-612)||(32004991-32005159)
chr7 (441-612)||(2659217-2659388)
chr7 (439-604)||(19590909-19591075)
chr7 (450-612)||(23953106-23953268)
chr7 (442-612)||(4478077-4478247)
chr7 (439-604)||(38859025-38859191)
chr7 (447-608)||(4641443-4641604)
chr7 (434-602)||(37787153-37787322)
chr7 (442-604)||(2658837-2659000)
chr7 (442-603)||(32004612-32004774)
chr7 (442-604)||(34533789-34533952)
chr7 (444-603)||(35288903-35289063)
chr7 (443-604)||(19830804-19830965)
chr7 (440-586)||(38160947-38161093)
chr7 (441-604)||(23952727-23952892)
chr7 (457-570)||(29099863-29099976)
chr7 (447-604)||(4641828-4641983)
chr7 (442-582)||(28583437-28583577)
chr7 (445-585)||(28584326-28584466)
chr7 (443-508)||(39137014-39137080)
chr7 (543-612)||(35579264-35579333)
chr7 (443-499)||(34595263-34595319)
chr7 (443-519)||(49064033-49064109)
chr7 (442-497)||(787279-787334)
chr7 (434-497)||(27245194-27245256)
chr7 (549-612)||(32427398-32427461)
chr7 (444-497)||(26048439-26048492)
chr7 (440-497)||(48247583-48247640)
chr7 (434-604)||(7732478-7732648)
chr7 (439-495)||(16917708-16917764)
[»] chr6 (37 HSPs)
chr6 (442-612)||(18257135-18257305)
chr6 (442-612)||(20741098-20741268)
chr6 (439-612)||(10900307-10900480)
chr6 (443-612)||(15828018-15828187)
chr6 (444-612)||(11276959-11277127)
chr6 (440-612)||(28472633-28472804)
chr6 (440-612)||(29859822-29859993)
chr6 (440-612)||(31470693-31470865)
chr6 (441-604)||(2319669-2319832)
chr6 (442-612)||(12935534-12935704)
chr6 (439-612)||(11444982-11445155)
chr6 (441-604)||(12935154-12935318)
chr6 (447-612)||(10899942-10900108)
chr6 (444-612)||(1149808-1149977)
chr6 (440-604)||(11445371-11445536)
chr6 (440-604)||(22219737-22219902)
chr6 (442-604)||(23075512-23075675)
chr6 (443-611)||(23073998-23074155)
chr6 (445-603)||(18505305-18505463)
chr6 (447-608)||(2322600-2322760)
chr6 (444-607)||(4811372-4811535)
chr6 (447-570)||(18504922-18505045)
chr6 (443-604)||(20741485-20741650)
chr6 (443-604)||(31470314-31470476)
chr6 (444-563)||(18257563-18257682)
chr6 (443-612)||(11276589-11276759)
chr6 (446-586)||(29033436-29033577)
chr6 (445-570)||(15827639-15827766)
chr6 (434-585)||(18296135-18296285)
chr6 (442-532)||(1149463-1149553)
chr6 (444-570)||(4811675-4811801)
chr6 (447-580)||(3835135-3835268)
chr6 (446-586)||(29035040-29035180)
chr6 (444-500)||(22534214-22534270)
chr6 (443-612)||(35163564-35163734)
chr6 (439-612)||(32836375-32836547)
chr6 (425-489)||(5120970-5121034)
[»] chr2 (52 HSPs)
chr2 (442-612)||(11090519-11090689)
chr2 (439-612)||(40815722-40815895)
chr2 (441-609)||(239350-239517)
chr2 (442-609)||(22374318-22374485)
chr2 (443-609)||(26538096-26538262)
chr2 (439-612)||(18451208-18451381)
chr2 (443-612)||(40027139-40027308)
chr2 (442-612)||(1978106-1978276)
chr2 (439-612)||(28616608-28616782)
chr2 (439-612)||(26538455-26538629)
chr2 (444-612)||(43058333-43058501)
chr2 (447-612)||(14432145-14432310)
chr2 (441-612)||(3025463-3025633)
chr2 (439-604)||(7446730-7446896)
chr2 (447-612)||(8425737-8425902)
chr2 (443-604)||(18450829-18450991)
chr2 (443-585)||(20444748-20444890)
chr2 (442-604)||(22374709-22374872)
chr2 (446-604)||(40815347-40815506)
chr2 (443-604)||(28616998-28617160)
chr2 (443-600)||(7446341-7446497)
chr2 (440-604)||(43058717-43058881)
chr2 (434-585)||(20440436-20440586)
chr2 (447-604)||(40027524-40027682)
chr2 (442-604)||(11090904-11091067)
chr2 (445-604)||(239736-239896)
chr2 (442-570)||(1978528-1978656)
chr2 (445-585)||(35781067-35781207)
chr2 (444-585)||(35779708-35779849)
chr2 (442-562)||(28847122-28847242)
chr2 (439-603)||(3025848-3026011)
chr2 (438-604)||(14432525-14432692)
chr2 (447-603)||(8425358-8425514)
chr2 (446-585)||(8972239-8972378)
chr2 (446-586)||(15551501-15551641)
chr2 (446-584)||(15552459-15552596)
chr2 (441-612)||(28143408-28143578)
chr2 (443-602)||(31797166-31797324)
chr2 (442-609)||(14942225-14942394)
chr2 (439-497)||(38007945-38008003)
chr2 (443-497)||(42192736-42192790)
chr2 (439-519)||(62952-63032)
chr2 (441-497)||(25336093-25336149)
chr2 (447-518)||(3822924-3822995)
chr2 (444-495)||(4355755-4355806)
chr2 (434-497)||(43216202-43216265)
chr2 (439-497)||(20128230-20128288)
chr2 (439-497)||(42192235-42192293)
chr2 (444-497)||(6949937-6949990)
chr2 (440-497)||(33921105-33921162)
chr2 (441-497)||(24140167-24140223)
chr2 (443-495)||(44220140-44220192)
[»] scaffold0951 (2 HSPs)
scaffold0951 (442-612)||(1665-1835)
scaffold0951 (441-604)||(2051-2215)
[»] chr4 (68 HSPs)
chr4 (442-612)||(25447613-25447783)
chr4 (439-612)||(11153524-11153697)
chr4 (441-612)||(12234326-12234497)
chr4 (433-612)||(25937659-25937838)
chr4 (446-612)||(33109686-33109852)
chr4 (446-612)||(46193782-46193948)
chr4 (446-612)||(38962196-38962362)
chr4 (443-612)||(15523611-15523780)
chr4 (446-611)||(23494445-23494610)
chr4 (440-612)||(22434555-22434725)
chr4 (446-609)||(4219559-4219722)
chr4 (443-612)||(48526195-48526363)
chr4 (439-612)||(51020792-51020965)
chr4 (444-606)||(46193405-46193568)
chr4 (439-604)||(22434174-22434340)
chr4 (447-612)||(2118673-2118837)
chr4 (443-612)||(22170314-22170482)
chr4 (444-604)||(25447247-25447408)
chr4 (439-604)||(4219943-4220109)
chr4 (442-603)||(15523233-15523395)
chr4 (444-604)||(45082808-45082969)
chr4 (442-611)||(54995446-54995614)
chr4 (441-560)||(23494872-23494991)
chr4 (441-604)||(20470895-20471059)
chr4 (441-612)||(45082429-45082598)
chr4 (444-604)||(12234713-12234874)
chr4 (442-604)||(54995067-54995230)
chr4 (447-604)||(48526565-48526723)
chr4 (442-570)||(33109883-33110011)
chr4 (442-593)||(51021191-51021342)
chr4 (443-570)||(25938090-25938217)
chr4 (443-604)||(11153145-11153307)
chr4 (446-604)||(2118295-2118454)
chr4 (447-604)||(18751602-18751760)
chr4 (440-586)||(20958264-20958408)
chr4 (441-558)||(18763951-18764068)
chr4 (461-604)||(12503453-12503597)
chr4 (445-585)||(44892552-44892692)
chr4 (462-585)||(43243685-43243807)
chr4 (442-585)||(48293592-48293735)
chr4 (512-612)||(12503813-12503913)
chr4 (442-586)||(48713749-48713893)
chr4 (444-561)||(35363028-35363146)
chr4 (442-580)||(48708293-48708431)
chr4 (447-580)||(16690939-16691072)
chr4 (462-582)||(43281198-43281317)
chr4 (444-585)||(48294946-48295088)
chr4 (444-580)||(16691481-16691616)
chr4 (445-585)||(44890518-44890658)
chr4 (443-570)||(10258306-10258433)
chr4 (451-582)||(20957196-20957327)
chr4 (443-514)||(16318251-16318322)
chr4 (502-585)||(43242328-43242411)
chr4 (553-612)||(18751979-18752038)
chr4 (443-612)||(17503973-17504141)
chr4 (505-585)||(44220781-44220861)
chr4 (444-540)||(55189528-55189624)
chr4 (444-585)||(30597925-30598065)
chr4 (443-497)||(55677451-55677505)
chr4 (439-495)||(12593518-12593574)
chr4 (446-497)||(44219377-44219428)
chr4 (434-497)||(45838537-45838600)
chr4 (442-497)||(46737148-46737203)
chr4 (440-497)||(33689825-33689882)
chr4 (543-612)||(35193406-35193475)
chr4 (580-612)||(17504337-17504369)
chr4 (441-497)||(34789876-34789932)
chr4 (441-497)||(41608908-41608964)
[»] scaffold1223 (2 HSPs)
scaffold1223 (446-612)||(755-920)
scaffold1223 (434-612)||(1117-1296)
[»] scaffold0273 (2 HSPs)
scaffold0273 (442-612)||(4584-4754)
scaffold0273 (483-604)||(4242-4364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (440-612)||(134050-134222)
[»] scaffold0007 (4 HSPs)
scaffold0007 (443-612)||(64301-64470)
scaffold0007 (447-604)||(64689-64847)
scaffold0007 (446-612)||(205746-205911)
scaffold0007 (443-540)||(210787-210884)
[»] scaffold0027 (2 HSPs)
scaffold0027 (440-612)||(42536-42707)
scaffold0027 (447-612)||(42172-42338)
[»] scaffold0176 (2 HSPs)
scaffold0176 (443-611)||(18834-19001)
scaffold0176 (439-540)||(19070-19171)
[»] scaffold0432 (2 HSPs)
scaffold0432 (447-612)||(10250-10414)
scaffold0432 (447-570)||(9935-10057)
[»] scaffold0417 (2 HSPs)
scaffold0417 (463-612)||(10640-10789)
scaffold0417 (444-604)||(11007-11168)
[»] scaffold1585 (1 HSPs)
scaffold1585 (445-586)||(568-709)
[»] scaffold0113 (1 HSPs)
scaffold0113 (443-570)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (461-604)||(16880-17024)
scaffold0157 (512-612)||(16564-16664)
[»] scaffold0057 (2 HSPs)
scaffold0057 (447-585)||(61862-62000)
scaffold0057 (442-518)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (448-585)||(454-589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (447-547)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (493-586)||(7691-7784)
[»] scaffold0097 (1 HSPs)
scaffold0097 (439-497)||(46761-46819)
[»] scaffold1339 (1 HSPs)
scaffold1339 (441-469)||(30-58)
[»] scaffold0830 (1 HSPs)
scaffold0830 (441-469)||(5352-5380)


Alignment Details
Target: chr8 (Bit Score: 416; Significance: 0; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 8 - 443
Target Start/End: Original strand, 35106606 - 35107041
Alignment:
Q  8 gttttggcaatctttgttaatgctcaatcttcattggtgacttcagtgttgcactagccgtggatggccctgaaatgtttatccgaattgcaaaaccatt 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35106606 gttttggcaatcattgttaatgctcaatcttcattggtgacttcagtgttgcactagccgtggatggccctgaaatgtttaaccgaattgcaaaaccatt 35106705  T
Q  108 ctattcaaagactggcatgagatttattattttgctttggggagaaaaatcagacctgaatctgatcgctgaagaaaataaggaggtcccaatctttagt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35106706 ctattcaaagactggcatgagatttattattttgctttggggagaaaaatcagacctgaatctgatcgctgaagaaaataaggaggtcccaatctttagt 35106805  T
Q  208 ttcatggaagtcatagatttgggacgagagagtcgcatggcattgtctgattctcatgaagctagtaagtcgacttttttctcttcaaactcgggttata 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35106806 ttcatggaagtcatagatttgggacgagagagtcgcatggcattgtctgattctcatgaagctagtaagtcgacttttttctcttcaaactcgggttata 35106905  T
Q  308 ttatacttaagaattatcgatcaatactatttgaaaatttaataatatatggtcccccacctccttgagaattcaacaatatatggtcctctcaaatgaa 407  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35106906 ttatacttaagaattgtcgatcaatactatttgaaaatttaataatatatggtcccccaccttcttgagaattcaacaatatatggtcctctcaaatgaa 35107005  T
Q  408 aaattgtccttgttgcaagttctaacatttctttta 443  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35107006 aaattgtccttgttgcaagttgtaacatttctttta 35107041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 440 - 611
Target Start/End: Complemental strand, 19176839 - 19176668
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176839 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19176740  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  19176739 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctacc 19176668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 41681132 - 41681301
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  41681232 gttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttaaacataccc 41681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 440 - 612
Target Start/End: Original strand, 12571859 - 12572032
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  12571859 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcattt 12571958  T
Q  540 tcgttgcatttttcgtcct-acctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12571959 ttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 12572032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 439 - 612
Target Start/End: Original strand, 11656450 - 11656624
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  11656450 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatt 11656549  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  11656550 tttgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccc 11656624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 9930203 - 9930034
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  9930103 ttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccc 9930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 442 - 611
Target Start/End: Original strand, 31133218 - 31133387
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||     
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  31133318 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 31133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 441 - 612
Target Start/End: Complemental strand, 44831793 - 44831622
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttt 44831694  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     ||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  44831693 tgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 44831622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 447 - 612
Target Start/End: Original strand, 33328161 - 33328326
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 33328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 448 - 612
Target Start/End: Original strand, 13224645 - 13224808
Alignment:
Q  448 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 547  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  548 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 13224808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 13225185 - 13225023
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 439 - 611
Target Start/End: Complemental strand, 9178185 - 9178014
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||    
T  9178185 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatt 9178086  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    || |||||||||||| || |||| |||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  9178085 tttgttgcatttttcatcttacc-cccattttattctcaaaaaacgcagagaaatgacaattttagacctacc 9178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 441 - 604
Target Start/End: Original strand, 19176287 - 19176451
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  541 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 11657003 - 11656841
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| |    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 44831246 - 44831408
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 439 - 570
Target Start/End: Complemental strand, 34541098 - 34540967
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  34541098 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatt 34540999  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt 570  Q
    || ||||||||||||||||||||||| |||||    
T  34540998 tttgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 447 - 604
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||  |||| |  ||||| ||||||||||||||  |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 444 - 593
Target Start/End: Complemental strand, 41681679 - 41681529
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 593  Q
    ||||||||||||||||||| | ||||| |  ||||| ||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaat 41681529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 440 - 604
Target Start/End: Original strand, 33742918 - 33743082
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcattt 33743016  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | | ||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  33743017 ttgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 445 - 603
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  545 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
    |||||||||||| ||||||| ||||| |  ||||| ||| |||||||||| || ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 447 - 604
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 604
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  546 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||| |||||||||||| |  ||||| ||||||||||||||  |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 491 - 610
Target Start/End: Complemental strand, 33743417 - 33743298
Alignment:
Q  491 tggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagaga 590  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  591 aataacagttttagacctac 610  Q
    ||||||||||||||||||||    
T  33743317 aataacagttttagacctac 33743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 447 - 612
Target Start/End: Complemental strand, 4630328 - 4630169
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||||||  ||||||||||||| | ||||||||||||||||      | |||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccc 4630169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 442 - 552
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||     
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  542 gttgcattttt 552  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 442 - 598
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||| |||||||  | ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||     
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacag 598  Q
     |||||||||||||| ||||||| ||||| |  ||||| ||||||| |||||| ||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 439 - 582
Target Start/End: Original strand, 10918121 - 10918264
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||| ||||||||| |||| ||||||||||||||  |||||||||||| ||||| ||||   |||||||||| |||||  ||||||||| |||||||    
T  10918121 ttttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatt 10918220  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaa 582  Q
    || |||||||||||| || |||| |||||||||| |||||||||    
T  10918221 tttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 443 - 585
Target Start/End: Complemental strand, 8074097 - 8073956
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   |||||||||||||||||| |    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatcatttt-g 8073999  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||| ||||  | | |||||||||  ||||||||||||    
T  8073998 ttgcattttacgtcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 585
Target Start/End: Original strand, 43958264 - 43958326
Alignment:
Q  523 tccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    |||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 477
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggc 477  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 35427361 - 35427283
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 519  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||| || ||  ||| |||| ||||||||    
T  35427361 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaa 35427283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 443 - 484
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactca 484  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 497
Target Start/End: Original strand, 15255850 - 15255906
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  15255850 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 15255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 497
Target Start/End: Complemental strand, 6115662 - 6115604
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||| |||||||||||| || ||||| || |||| ||||| |||||||    
T  6115662 ttttaggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcct 6115604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 604
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  536 attttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||| |||||||||||| ||| |||||||||||| |  ||||| ||||| |||||||| ||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 43958205 - 43958254
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 489  Q
    ||||| |||||||| |||||||||| ||||||||||  ||||||||||||    
T  43958205 tttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 466
Target Start/End: Complemental strand, 14055181 - 14055145
Alignment:
Q  430 taacatttcttttaggcttaattacacttttggtcct 466  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  14055181 taacatttctttttggcttaattactcttttggtcct 14055145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 28254971 - 28254919
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 28254919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 4e-86; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 18183519 - 18183346
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183519 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 18183420  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183419 tttgttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 18183346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 442 - 612
Target Start/End: Complemental strand, 2865302 - 2865132
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||| |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 2865132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 444 - 612
Target Start/End: Original strand, 8647438 - 8647606
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 5819474 - 5819306
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccc 5819306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 444 - 612
Target Start/End: Original strand, 19359136 - 19359304
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccc 19359304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 439 - 611
Target Start/End: Complemental strand, 15372423 - 15372251
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15372423 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatt 15372324  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    || ||||||||||| || |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15372323 tttgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacc 15372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 440 - 612
Target Start/End: Original strand, 15708967 - 15709138
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  15708967 tttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcattt 15709066  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15709067 ttgttgcatatttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15709138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 442 - 606
Target Start/End: Complemental strand, 24362383 - 24362219
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||     
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 606  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 24362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 443 - 611
Target Start/End: Complemental strand, 29455288 - 29455120
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  29455188 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacc 29455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 8460928 - 8461098
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8461098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 441 - 612
Target Start/End: Complemental strand, 14215791 - 14215620
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     ||||||||||||||| || | |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 14215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 8647988 - 8647822
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8647988 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 8647889  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||| ||||| | ||||| |  ||||| |||||||||||||| ||||||||||    
T  8647888 tttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 164741 - 164568
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||| | ||||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  164741 ttttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatt 164642  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || ||||||||||| |||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  164641 tttgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccc 164568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 442 - 604
Target Start/End: Original strand, 5818927 - 5819090
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 442 - 604
Target Start/End: Original strand, 18182968 - 18183131
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  542 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||||| | |||||| | ||| |||||||||||||| ||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 442 - 604
Target Start/End: Complemental strand, 19359683 - 19359520
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||| |||||||||||||||||| ||||| |  ||||| ||||| ||||||||  |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 442 - 609
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |  || |||||||||| ||||||||||| ||||||||||||||||||     
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
     ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 8461477 - 8461315
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     ||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 446 - 604
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  546 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 444 - 603
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 440 - 604
Target Start/End: Original strand, 24331555 - 24331722
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc--at 537  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatt 24331654  T
Q  538 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||| |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24331655 ttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 446 - 604
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  546 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 450 - 604
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  450 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 549  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  550 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 443 - 606
Target Start/End: Complemental strand, 25000635 - 25000471
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| |||| ||||||||||||||| |    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 606  Q
    ||||||||||||||| |||||| ||||| |  |||||||||||||||||||| ||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 450 - 604
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  450 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 549  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| || |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  550 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 29454739 - 29454901
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 16018588 - 16018755
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||| |||||||||||||||||||||||| |||||      
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||| ||||||||| ||||||||||||||||||||   ||| |||| ||||||||||||||||||    
T  16018687 ttgcattttccgtcctacc-cccattttattctccaaaaatatagaaaaatgacagttttagacctaccc 16018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 446 - 609
Target Start/End: Complemental strand, 24332107 - 24331940
Alignment:
Q  446 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttc-g 542  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||  |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  543 ttgcattttt-cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagaccta 24331940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 442 - 606
Target Start/End: Complemental strand, 16019134 - 16018969
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||| |||| ||| ||||||||||||||||     
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  542 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttagac 606  Q
    |||| |||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 444 - 586
Target Start/End: Complemental strand, 7349562 - 7349420
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| |||||||||| ||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    |||| ||||| ||||||| |||||||| | |||||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 466 - 611
Target Start/End: Original strand, 25000112 - 25000257
Alignment:
Q  466 tcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctccc 565  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||| |||| ||||||| ||||||||||||  |||||||||| |||||||| |||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  566 attttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacc 25000257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 15709518 - 15709353
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||| | ||||||||    
T  15709518 tttttggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatt 15709420  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |  ||||||||||||||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||    
T  15709419 tctgttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 446 - 569
Target Start/End: Original strand, 15371873 - 15371995
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  546 catttttcgtcctacctcccattt 569  Q
    |||||||||||| |||||| ||||    
T  15371972 catttttcgtcccacctcctattt 15371995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 445 - 570
Target Start/End: Complemental strand, 4222266 - 4222142
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||  ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  545 gcatttttcgtcctacctcccatttt 570  Q
    ||||||||||||||||| ||||||||    
T  4222166 gcatttttcgtcctacc-cccatttt 4222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 444 - 584
Target Start/End: Original strand, 4623148 - 4623286
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||||||||  |||||||||||||||||||  |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacg 584  Q
     ||||||| ||||||||  |||||||||| |||||||||||    
T  4623248 ggcattttccgtcctac--cccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 444 - 570
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  ||||||  |||||||||| ||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  544 tgcatttttcgtcctacctcccatttt 570  Q
    |||| ||||||||||||| ||||||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 450 - 582
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  450 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcat- 548  Q
    |||||| |||||||| || ||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||||| |||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  549 ttttcgtcctacctcccattttattctccaaaaa 582  Q
    |||||||||||||||||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 444 - 582
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   |||||| | |||||||||| ||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaa 582  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  4219763 tgcatttttcgtcctacc-cccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 6018315 - 6018430
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||||| || ||||||||||||||||||||   | |||||||||||||||| |||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  545 gcatttttcgtcctacc 561  Q
    ||| |||| ||||||||    
T  6018414 gcagttttagtcctacc 6018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 583
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  457 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 556  Q
    |||| |||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  || ||||||||||||||  |||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  557 ctacctcccattttattctccaaaaac 583  Q
    ||||| |||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 586
Target Start/End: Complemental strand, 13814226 - 13814131
Alignment:
Q  495 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    |||||||||||||| ||||||||||| ||| |     |||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctacc-cccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 443 - 606
Target Start/End: Complemental strand, 41834606 - 41834443
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttc 541  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| |||| | || |||||| |||     
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtttt 41834508  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 606  Q
     ||||| |||| ||||||||||| |||||   |||   |||||||||||||| ||||||||||||    
T  41834507 tttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 570
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  526 ttcaattatcattttcgttgcatttttcgtcctacctcccatttt 570  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 495
Target Start/End: Complemental strand, 15029857 - 15029804
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| |||||    
T  15029857 taggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtc 15029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 519
Target Start/End: Complemental strand, 22651859 - 22651782
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 519  Q
    ||||||||||||||||||| |||||||  ||||| ||  ||||||||| |||| ||||| |||| |||  ||||||||    
T  22651859 taggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaa 22651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 15115641 - 15115585
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||| |||||   ||||| || |||||||||| |||||||    
T  15115641 ttaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcct 15115585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 611
Target Start/End: Complemental strand, 28495288 - 28495220
Alignment:
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    ||||| |||| ||||||||||| |||||   ||||| || ||||||||||| | |||||||||||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaactccagaaccgcagagaaatgatagttttagacctacc 28495220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 160; Significance: 6e-85; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 441 - 612
Target Start/End: Original strand, 4790 - 4961
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4890 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 4961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 446 - 558
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  546 catttttcgtcct 558  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 4e-83; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 39556122 - 39555954
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 39555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 442 - 612
Target Start/End: Complemental strand, 31779199 - 31779029
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccc 31779029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 441 - 612
Target Start/End: Original strand, 20840557 - 20840728
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttt 20840656  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     |||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  20840657 tgttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccc 20840728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 5136978 - 5137148
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5137148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 23644461 - 23644630
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23644561 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccc 23644630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 24301106 - 24300933
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| | |||||||    
T  24301106 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatt 24301007  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24301006 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 24300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 612
Target Start/End: Original strand, 41046703 - 41046868
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 41046868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 37726928 - 37727097
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37727097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 444 - 612
Target Start/End: Original strand, 43973441 - 43973609
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctaccc 43973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 441 - 599
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagt 599  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  48453086 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 27394123 - 27393954
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  27394023 ttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccc 27393954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 439 - 609
Target Start/End: Complemental strand, 32535513 - 32535339
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32535513 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 32535414  T
Q  539 -----ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
         || |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  32535413 aaatttttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgatagttttagaccta 32535339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 446 - 612
Target Start/End: Complemental strand, 25853770 - 25853604
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||| ||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 25853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 439 - 612
Target Start/End: Original strand, 30104477 - 30104649
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  30104477 ttttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatt 30104576  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  30104577 tttgttgcatttttcgtcctacc-cccattttattatctaaaaacgcagagaaatgacagttttagacctaccc 30104649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 43973990 - 43973824
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  43973990 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatt 43973891  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  43973890 tttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 37727480 - 37727314
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37727480 tttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatt 37727381  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  37727380 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 26837905 - 26837733
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||| |||||||    
T  26837905 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatt 26837807  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || ||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  26837806 tttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccc 26837733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 448 - 612
Target Start/End: Complemental strand, 22425354 - 22425190
Alignment:
Q  448 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 547  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  548 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccc 22425190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 20841107 - 20840945
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 39555577 - 39555739
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||| |||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 444 - 604
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||| |||||||| ||||| |  ||||| |||||||||||||||||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 442 - 604
Target Start/End: Complemental strand, 4275911 - 4275748
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||     
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 440 - 606
Target Start/End: Complemental strand, 29801965 - 29801798
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29801965 tttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 29801866  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 606  Q
    | |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||||    
T  29801865 ttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 31778652 - 31778814
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 441 - 604
Target Start/End: Original strand, 17464488 - 17464652
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  541 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     ||||||||||||||||||||||| ||||| |  ||||| ||||| | |||||| ||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 440 - 612
Target Start/End: Complemental strand, 26275115 - 26274944
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||| ||||||| | |||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  26275115 tttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcattt 26275016  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  26275015 ttgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccc 26274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 443 - 609
Target Start/End: Complemental strand, 17465038 - 17464871
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  543 ttgcat-ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    |||||| |||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||    
T  17464938 ttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagaccta 17464871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 27393660 - 27393822
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||| || ||||| |  | ||| |||||||||||||| ||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 441 - 604
Target Start/End: Complemental strand, 5137529 - 5137365
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  541 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     ||||||||||| |||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 439 - 604
Target Start/End: Original strand, 22424809 - 22424975
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  22424809 ttttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatt 22424908  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| ||||||||||    
T  22424909 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 30098309 - 30098147
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  || || ||||||||||| || ||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 447 - 570
Target Start/End: Original strand, 32534962 - 32535085
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  547 atttttcgtcctacctcccatttt 570  Q
    |||||||||||||||||| |||||    
T  32535062 atttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 23645015 - 23644849
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  23645015 ttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatt 23644916  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || |||||||||||| |||||||||| ||||| |  ||| |  ||||||||||||| ||||||||||    
T  23644915 tttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 25612519 - 25612381
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| || |||||||||||| |||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 442 - 604
Target Start/End: Original strand, 26837358 - 26837521
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||     
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 444 - 583
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  |||||||||||||||||||  |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaac 583  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 447 - 604
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||| ||||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||| ||||||| ||||| |  ||||| ||||||||  |||| ||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  544 tgcatttttcgtcctacc 561  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 447 - 604
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | ||||||||| |||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 444 - 586
Target Start/End: Complemental strand, 50116954 - 50116812
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||||||||| ||| |||||||||||||| |||| |||||||||| ||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    |||| ||||||||||||| |||||||| | |||||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 445 - 584
Target Start/End: Complemental strand, 32697244 - 32697106
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| | |||  ||||||||||||||||||||||  || |||||||||||||||| |||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  545 gcatttttcgtcctacctcccattttattctccaaaaacg 584  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  32697144 gcatttttcgtcctacc-cccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 439 - 585
Target Start/End: Complemental strand, 51474884 - 51474737
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  |||||| | ||||||||    
T  51474884 ttttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatt 51474785  T
Q  539 ttcgttgcatttttcgtcctacctccca-ttttattctccaaaaacgc 585  Q
    || |||||||||||||||||||| || | |||||| ||||||||||||    
T  51474784 tttgttgcatttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 447 - 604
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||| | || || |||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||||| |||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 442 - 585
Target Start/End: Original strand, 37220555 - 37220698
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |  | || ||| |||||||||||||| ||||  |||||||| ||||||||||     
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    |||||| |||||||||||||  ||||||||| ||||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 558
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||  |||||||  |||||||||| |||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  545 gcatttttcgtcct 558  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 442 - 582
Target Start/End: Original strand, 45965936 - 45966076
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  |  |||||| ||||||||||| |||||||  ||||||| ||||||||||      
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaa 582  Q
    |||||||||||||| ||| | |||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 588
Target Start/End: Complemental strand, 25420684 - 25420542
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||| || |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||||||||||||| ||||| ||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcaga 588  Q
    ||||||||||| |||| |||||||||| || |||||| |||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 442 - 530
Target Start/End: Complemental strand, 37222118 - 37222030
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 530  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||  ||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 439 - 540
Target Start/End: Original strand, 25419139 - 25419241
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatcat 537  Q
    ||||| |||| |||| |||||||||| ||||||||| || ||||||||||| | || ||||||||||||||||||||||||| |||| ||||||||||||    
T  25419139 ttttaagcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcat 25419238  T
Q  538 ttt 540  Q
    |||    
T  25419239 ttt 25419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 463 - 572
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  463 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 562  Q
    ||||| |||||| | |||||||||||| |||| | ||||||||||||||||||||||  ||  ||||||||||||||| ||||||||||||||||| ||     
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  563 cccattttat 572  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 586
Target Start/End: Original strand, 23227261 - 23227398
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||| ||||| ||||||||||   |||||||||| ||||||||||| |||||||       | ||||||||||||   ||||| ||||| ||||||| |    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    |||||||||||||||| |  |||||||||| |||||||||||||    
T  23227355 ttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 612
Target Start/End: Original strand, 49407792 - 49407963
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | | || |    
T  49407792 tttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact-ttatgt 49407890  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |   | || |||| ||| ||||||| |||||   |||||||||||||||||||| ||| ||||||||||||||    
T  49407891 tttgtacagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccc 49407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 441 - 612
Target Start/End: Complemental strand, 27200240 - 27200070
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||||| |  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || |||||  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
      ||||| |||| ||| ||||||| |||||   ||||| |||||||||||||| |||| |||||||||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccc 27200070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 558
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||| ||||||||||| | |||||||||||| |||||| || |  || | ||||||||||||||||||  ||||| | ||||| ||||| |||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  547 atttttcgtcct 558  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 612
Target Start/End: Complemental strand, 50901077 - 50900906
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||||||||||  ||||| ||  ||||| ||| ||| ||||||  ||  |||  ||||||||| |||| | || ||| || |    
T  50901077 tttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgt 50900979  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |  ||||| |||| ||||||||||| |||||   ||||| ||||||| ||||||  |||||||||| ||||||    
T  50900978 tttttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccc 50900906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 52375880 - 52375824
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 612
Target Start/End: Original strand, 55192222 - 55192285
Alignment:
Q  549 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||| ||||||||||| |||||   ||||| |||||||||||||| ||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccc 55192285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 612
Target Start/End: Original strand, 37075676 - 37075856
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaa-- 530  Q
    |||| ||||| ||||||||||||||||||||  ||  ||||| || |||||||||| |||||||||| |||| ||| || |||||| | |||| | ||      
T  37075676 attttttttatgcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatca-aacaaacccgtccctaaact 37075774  T
Q  531 ttatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     |||  ||||  ||||| |||| ||||||||||  |||||   ||||| |||||||||||||| || |||||||||||||||    
T  37075775 atatgtttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccc 37075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 519
Target Start/End: Original strand, 22370599 - 22370671
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 519  Q
    ||||||||||||||||||||||  ||||| || |||||||||| ||||||| || |||| ||||  |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaa 22370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 611
Target Start/End: Original strand, 29801535 - 29801583
Alignment:
Q  563 cccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    ||||||||||||| |||||| |||||||||| |||||||||||| ||||    
T  29801535 cccattttattcttcaaaaatgcagagaaatgacagttttagacatacc 29801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 38121917 - 38121810
Alignment:
Q  52 agtgttgcactagccgtggatggccctgaaatgtttatccgaattgcaaaaccattctattcaaagactggcatgagatttattattttgctttggggag 151  Q
    |||||||||||||| |||||    |||||||||| ||  |  |||||||||||||| ||||  |||||    || |||||||||||| ||||||||||||    
T  38121917 agtgttgcactagctgtggacaatcctgaaatgtataatcagattgcaaaaccattttatttgaagacctcaatcagatttattattctgctttggggag 38121818  T
Q  152 aaaaatca 159  Q
    ||||||||    
T  38121817 aaaaatca 38121810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 51827956 - 51828117
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct-gcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | || ||| || ||     
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  542 gttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttag 604  Q
     |||||||||| |||||| ||||| |||||   ||||| ||||||| | |||| ||||||||||    
T  51828054 tttgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 497
Target Start/End: Complemental strand, 330383 - 330329
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||| |||||||||||  ||||| || |||||||||| |||||||    
T  330383 aggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcct 330329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 497
Target Start/End: Complemental strand, 55390148 - 55390090
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||||||  ||||  || | |||||||| |||||||    
T  55390148 ttttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcct 55390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 40275093 - 40275146
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 40275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 497
Target Start/End: Original strand, 2051292 - 2051348
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  2051292 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 2051348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 443 - 475
Target Start/End: Original strand, 25611497 - 25611529
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttg 475  Q
    ||||||||||||||||||| |||||||||||||    
T  25611497 aggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 443 - 495
Target Start/End: Complemental strand, 49720908 - 49720856
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  49720908 aggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 49720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 52237366 - 52237310
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||| ||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  52237366 ttagccttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 52237310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 2e-81; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 50970824 - 50970655
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 50970655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 5540364 - 5540195
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5540195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 442 - 609
Target Start/End: Original strand, 18984117 - 18984284
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagaccta 18984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 15646741 - 15646572
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15646572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 444 - 612
Target Start/End: Original strand, 29306953 - 29307121
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29307121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 446 - 612
Target Start/End: Complemental strand, 33144462 - 33144296
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33144296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 29869619 - 29869788
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 447 - 612
Target Start/End: Original strand, 15173099 - 15173264
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| |||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15173264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 8679086 - 8678919
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  8678986 tgcatttttcgtcctacct-ccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8678919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 447 - 612
Target Start/End: Complemental strand, 5963120 - 5962955
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||| ||||||||||||||| |||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 440 - 612
Target Start/End: Original strand, 9018969 - 9019141
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  9018969 tttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattt 9019068  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||    
T  9019069 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccc 9019141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 21856588 - 21856420
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 21856420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 442 - 611
Target Start/End: Complemental strand, 26859606 - 26859438
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||     
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacc 26859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 29307487 - 29307318
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctaccc 29307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 444 - 609
Target Start/End: Original strand, 17433216 - 17433381
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 17433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 440 - 608
Target Start/End: Complemental strand, 9019512 - 9019343
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  9019512 tttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattt 9019413  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacct 608  Q
    | ||||||||||||||||||||||| ||||| |  | ||| |||||||||||||||||||||||||||||    
T  9019412 ttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacct 9019343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 446 - 606
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  546 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 606  Q
    ||||||||||||||||||| ||||| |  || || |||||||||||||| ||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 446 - 607
Target Start/End: Original strand, 39154021 - 39154182
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacc 607  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||| |||||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacc 39154182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 442 - 602
Target Start/End: Original strand, 50970276 - 50970437
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 602  Q
    ||||||||||||||||||||| | ||||| |  ||||| |||||||||||||| ||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 29870169 - 29870003
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29870169 tttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatt 29870070  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| |  ||  | |||||||||||||| ||||||||||    
T  29870069 tttgttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 437 - 570
Target Start/End: Complemental strand, 18984671 - 18984538
Alignment:
Q  437 tcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 536  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18984671 tctttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 18984572  T
Q  537 ttttcgttgcatttttcgtcctacctcccatttt 570  Q
    |||| ||||||||||||||||||||||| |||||    
T  18984571 tttttgttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 440 - 604
Target Start/End: Original strand, 21856038 - 21856203
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 21856137  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  21856138 ttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 445 - 604
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  545 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | |||||||||||||||||| ||||| |  ||||| ||||||| ||||||  |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 445 - 604
Target Start/End: Original strand, 8678542 - 8678702
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  545 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||| | ||||| |  || || ||||||| |||||| ||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 445 - 603
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  545 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
    ||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 442 - 604
Target Start/End: Complemental strand, 15173640 - 15173478
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||     
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 439 - 604
Target Start/End: Original strand, 26859054 - 26859220
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26859054 tttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatt 26859153  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||  ||||| |  ||||| |||||||||||| ||| ||||||||    
T  26859154 tttgttgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttag 26859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 39154566 - 39154404
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  || || |||||||||||||| ||| ||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 452 - 604
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  452 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttt 551  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  552 tcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 442 - 604
Target Start/End: Original strand, 15646190 - 15646353
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||     
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||||  ||||| |  ||||| ||| |||||||||| ||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 443 - 584
Target Start/End: Original strand, 52268289 - 52268430
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||| |    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacg 584  Q
    ||||| ||||||||||||| |||||||| | |||||||||||    
T  52268389 ttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 445 - 604
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  545 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||| |||||||| ||||| |  ||||| |||| ||||| ||| ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 504 - 612
Target Start/End: Original strand, 4636033 - 4636140
Alignment:
Q  504 ttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttta 603  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  604 gacctaccc 612  Q
    |||||||||    
T  4636132 gacctaccc 4636140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 439 - 530
Target Start/End: Complemental strand, 2733507 - 2733416
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 530  Q
    ||||||||||||||| |||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2733507 ttttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 560
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  ||| |||| |||||||||| ||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  546 catttttcgtcctac 560  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 444 - 604
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  |||||||||||||||||||  |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||| ||||| |  ||||| ||||||||| |||| | ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 519  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 452 - 540
Target Start/End: Complemental strand, 47827125 - 47827037
Alignment:
Q  452 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||| ||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttt 47827037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 606
Target Start/End: Complemental strand, 44802728 - 44802555
Alignment:
Q  433 catttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 532  Q
    ||||| |||||||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||| | || |    
T  44802728 cattttttttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaact 44802629  T
Q  533 atcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 606  Q
    ||||| ||  ||||| |||| || |||||||| |||||   ||||| |||| |||| |||| ||| ||||||||    
T  44802628 atcatgttttttgcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 525
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 525  Q
    ||||||||| ||||||||||| |||  ||| | || |||||||||| |||||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 612
Target Start/End: Complemental strand, 17088688 - 17088518
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||||||||   |||||  |  ||||||||| ||||| |||| |||| ||| || |||||||| |||| | || ||| || |    
T  17088688 ttaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatca-aacaaaaccgtccctaaactat-atat 17088591  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |  ||||| |||| || |||||||| |||||    || | |||||||||||||| ||||||||||||||||||    
T  17088590 tttttgcagttttagttctacctcctattttcaaatctagaaacgcagagaaatgacagttttagacctaccc 17088518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 52235216 - 52235153
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt 505  Q
    |||||||||||||||||||| |||||   ||||  || ||||||||||||| ||||||||||||    
T  52235216 taggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgccctttt 52235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 497
Target Start/End: Original strand, 29438929 - 29438983
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  29438929 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 29438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 45048253 - 45048322
Alignment:
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||| |||| ||||||||||  |||||   ||||| ||||||| ||||||||||||||||||| |||||    
T  45048253 ttgcagttttagtcctacctcatattttcaactccagaaacgcatagaaataacagttttagacttaccc 45048322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 495
Target Start/End: Original strand, 50304441 - 50304490
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 495
Target Start/End: Complemental strand, 17641912 - 17641864
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 1e-79; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 19830418 - 19830588
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 19830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 37786766 - 37786935
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37786935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 444 - 612
Target Start/End: Original strand, 19590525 - 19590693
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccc 19590693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 442 - 612
Target Start/End: Complemental strand, 35289448 - 35289278
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccc 35289278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 447 - 612
Target Start/End: Complemental strand, 29100393 - 29100228
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 29100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 38858642 - 38858811
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38858742 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 38858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 442 - 611
Target Start/End: Complemental strand, 34534338 - 34534169
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||     
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctacc 34534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 32005159 - 32004991
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 32004991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 441 - 612
Target Start/End: Complemental strand, 2659388 - 2659217
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 2659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 19591075 - 19590909
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591075 ttttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19590976  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  19590975 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 450 - 612
Target Start/End: Complemental strand, 23953268 - 23953106
Alignment:
Q  450 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 549  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  550 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 23953106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 442 - 612
Target Start/End: Complemental strand, 4478247 - 4478077
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||     
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4478147 gttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 4478077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 38859191 - 38859025
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  38859191 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatt 38859092  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  38859091 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 447 - 608
Target Start/End: Original strand, 4641443 - 4641604
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||| |||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacct 608  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacct 4641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 434 - 602
Target Start/End: Complemental strand, 37787322 - 37787153
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 533  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  37787322 atttattttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaatta 37787223  T
Q  534 tcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 602  Q
    ||||||| ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||    
T  37787222 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 442 - 604
Target Start/End: Original strand, 2658837 - 2659000
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||| ||||||| ||||| |  ||||||||||||||||||||  |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 442 - 603
Target Start/End: Original strand, 32004612 - 32004774
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||     
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
    ||||||||||||| ||||||||| ||||| |  ||||| |||||||||||||| |||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 442 - 604
Target Start/End: Original strand, 34533789 - 34533952
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||| |||||||||||||||     
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||| |||||||||||| ||||| |  |||||||||||||||||||| ||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 444 - 603
Target Start/End: Original strand, 35288903 - 35289063
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
    ||||||||||||||||| ||  ||||| |  ||||| |||| ||||||||| |||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 19830965 - 19830804
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 440 - 586
Target Start/End: Original strand, 38160947 - 38161093
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||| ||||    
T  38160947 tttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattattt 38161046  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    | |||||||||||||||||||  |||||||||| |||||||||||||    
T  38161047 ttgttgcatttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 441 - 604
Target Start/End: Original strand, 23952727 - 23952892
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | ||||||||||||||||||||| | ||||| |  | ||| |||||||||||||| | ||||||||    
T  23952827 tggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 457 - 570
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  457 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  557 ctacctcccatttt 570  Q
    |||||||| |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 447 - 604
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||| ||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 442 - 582
Target Start/End: Original strand, 28583437 - 28583577
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||| || ||||| |||||||||||||||||||     
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaa 582  Q
     ||||||||||||||||||| |||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 445 - 585
Target Start/End: Complemental strand, 28584466 - 28584326
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  ||||||||||||||||||| |||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  545 gcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    | |||||||||| |||| |||||||||| ||||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 39137080 - 39137014
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaa 508  Q
    ||||||||||||||||||| ||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137080 aggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 35579333 - 35579264
Alignment:
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||| |||| ||| ||||||| |||||   ||| |||||||||| ||||||||||||||||||||||||    
T  35579333 ttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccc 35579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 443 - 499
Target Start/End: Complemental strand, 34595319 - 34595263
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 499  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| |||||||||    
T  34595319 aggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgc 34595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 49064033 - 49064109
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 519  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||||| ||||  ||||  ||| ||| |||||||||    
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaa 49064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 497
Target Start/End: Complemental strand, 787334 - 787279
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||| ||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  787334 taggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcct 787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 27245194 - 27245256
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||| ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  27245194 atttctttt-ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 612
Target Start/End: Complemental strand, 32427461 - 32427398
Alignment:
Q  549 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||| ||||| ||||| |||||   ||| |||||||||||||||| ||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaactctaaaaacgcagagaaatgacagttttagacctaccc 32427398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||| |||| | |||||| || |||||||||| |||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Original strand, 48247583 - 48247640
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||| |  |||||  | |||||||||| |||||||    
T  48247583 tttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcct 48247640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 604
Target Start/End: Original strand, 7732478 - 7732648
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaatt 532  Q
    |||| ||||||||||||||||| |||||||||| |  |||||  | |||||||||| ||||||| || |||||||| | ||||||||  |||||| || |    
T  7732478 attttttttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccttaaact 7732576  T
Q  533 atcattttcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttag 604  Q
    || || ||  ||||| |||| |||||| ||||| |||||   ||||| ||||||| | |||| ||||||||||    
T  7732577 at-atgttttttgcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttag 7732648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 495
Target Start/End: Original strand, 16917708 - 16917764
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||| |||||    
T  16917708 ttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtc 16917764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 1e-79; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 18257135 - 18257305
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 20741098 - 20741268
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||     
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 20741268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 10900480 - 10900307
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10900480 tttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 10900381  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900380 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 10900307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 15828187 - 15828018
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||| |    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828087 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 15828018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 11277127 - 11276959
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccc 11276959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 440 - 612
Target Start/End: Original strand, 28472633 - 28472804
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  28472633 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 28472732  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28472733 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 28472804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 440 - 612
Target Start/End: Original strand, 29859822 - 29859993
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  29859822 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 29859921  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29859922 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29859993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 440 - 612
Target Start/End: Complemental strand, 31470865 - 31470693
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  31470765 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccc 31470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 441 - 604
Target Start/End: Original strand, 2319669 - 2319832
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 604  Q
     |||||||||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 442 - 612
Target Start/End: Complemental strand, 12935704 - 12935534
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||     
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||| |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccc 12935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 439 - 612
Target Start/End: Original strand, 11444982 - 11445155
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  11444982 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatt 11445081  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || ||||||||||||||||||||  ||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  11445082 tttgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccc 11445155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 441 - 604
Target Start/End: Original strand, 12935154 - 12935318
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  541 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 447 - 612
Target Start/End: Original strand, 10899942 - 10900108
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctaccc 10900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 444 - 612
Target Start/End: Complemental strand, 1149977 - 1149808
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  544 tgcatttttcgtcctacctcccattttattctcca-aaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccc 1149808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 440 - 604
Target Start/End: Complemental strand, 11445536 - 11445371
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11445536 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 11445437  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  11445436 ttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 440 - 604
Target Start/End: Complemental strand, 22219902 - 22219737
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 22219803  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | |||||||||||||| |||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  22219802 ttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 442 - 604
Target Start/End: Complemental strand, 23075675 - 23075512
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  542 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||| |||||||| | |||||  ||||||||| |||||||||| ||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 443 - 611
Target Start/End: Original strand, 23073998 - 23074155
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23074090 ---catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacc 23074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 445 - 603
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  545 gcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttta 603  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 447 - 608
Target Start/End: Complemental strand, 2322760 - 2322600
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacct 608  Q
    ||||||||||||||| | ||||||||||||| ||||| ||||||||| ||||||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagacct 2322600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 444 - 607
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||  || |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacc 607  Q
    | ||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 447 - 570
Target Start/End: Original strand, 18504922 - 18505045
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  547 atttttcgtcctacctcccatttt 570  Q
    |||||||||||||||||| |||||    
T  18505022 atttttcgtcctacctcctatttt 18505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 20741650 - 20741485
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca---ttt 539  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |  |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 31470314 - 31470476
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||| ||||| |    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 444 - 563
Target Start/End: Complemental strand, 18257682 - 18257563
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  544 tgcatttttcgtcctacctc 563  Q
    | ||||||||||||||||||    
T  18257582 tacatttttcgtcctacctc 18257563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 11276589 - 11276759
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||| ||| |||| |||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||| |    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || ||||||||||||||||||| ||||| |  |||||||||||||||||||| |||||||||| |||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctaccc 11276759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 446 - 586
Target Start/End: Original strand, 29033436 - 29033577
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  546 catttttcgtcctacctcccattttatt-ctccaaaaacgca 586  Q
    ||  |||| ||||||| |||||||| || |||||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 445 - 570
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa--acggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||  |||||||||||| ||||||||| |    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  543 ttgcatttttcgtcctacctcccatttt 570  Q
    |||||||||||||||||||||| |||||    
T  15827739 ttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 434 - 585
Target Start/End: Original strand, 18296135 - 18296285
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 533  Q
    |||| ||||||||||||||| | |||| |||||||||||||| | ||||||| ||| || |  |||||||||||||||||||||||| |||||||| |||    
T  18296135 attttttttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcattta 18296234  T
Q  534 tcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  18296235 tcatttttgttgcatttttcgtcctacc-cccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 442 - 532
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 532  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 444 - 570
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  544 tgcatttttcgtcctacctcccatttt 570  Q
    |||||||||| || ||||||| |||||    
T  4811701 tgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 447 - 580
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  |||||| |||||||||||| || ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  547 atttttcgtcctacctcccattttattctccaaa 580  Q
    ||||||||||||||| |||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 446 - 586
Target Start/End: Complemental strand, 29035180 - 29035040
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    |||||||||||| |||  ||||||| | |||||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 500  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 35163734 - 35163564
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca-tttt 540  Q
    ||||||||||||||||||||||| ||  ||||| ||  ||||||||| |||| ||||| |||| ||| || |||||||  |||| | || |||   ||||    
T  35163734 aggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatca-aacaaaatcgtccctaaactatatgtttt 35163636  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
      ||||| |||| ||||||||||| |||||   |||||||||| ||||||||| |||||||||| |||||||    
T  35163635 ttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccc 35163564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 32836547 - 32836375
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| ||||||||||||||||| ||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| || ||| || | | ||     
T  32836547 tttttggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atg 32836449  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||  ||||| |||| ||||||||| | |||||   || || ||||| |||||||||||||||||||||||||||    
T  32836448 ttttttgcagttttagtcctaccttctattttcaacttcagaaacgaagagaaataacagttttagacctaccc 32836375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 489
Target Start/End: Complemental strand, 5121034 - 5120970
Alignment:
Q  425 agttctaacatttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 489  Q
    ||||||| ||||  |||||||||||||||||||||||||||| |  ||||| || ||||||||||    
T  5121034 agttctaccattcattttaggcttaattacacttttggtccttgcattttgaccaactcacgaaa 5120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 1e-79; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 11090519 - 11090689
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 11090689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 40815895 - 40815722
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  40815895 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatt 40815796  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40815795 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 441 - 609
Target Start/End: Original strand, 239350 - 239517
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  239449 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 239517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 442 - 609
Target Start/End: Original strand, 22374318 - 22374485
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 443 - 609
Target Start/End: Original strand, 26538096 - 26538262
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  26538196 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 18451381 - 18451208
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  18451381 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatt 18451282  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18451281 tttgttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 40027139 - 40027308
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 1978106 - 1978276
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1978276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 439 - 612
Target Start/End: Original strand, 28616608 - 28616782
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28616608 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatt 28616707  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  28616708 tttgttgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccc 28616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 26538629 - 26538455
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26538629 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatt 26538530  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| |||||||| |  | ||| |||||||||||||| ||||||||||||||||||    
T  26538529 tttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctaccc 26538455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 444 - 612
Target Start/End: Original strand, 43058333 - 43058501
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 43058501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 447 - 612
Target Start/End: Original strand, 14432145 - 14432310
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||| ||||||||| |||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 14432310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 441 - 612
Target Start/End: Original strand, 3025463 - 3025633
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     |||||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  3025563 tgttgcatttttcgtcctacc-cccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccc 3025633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 7446896 - 7446730
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446896 ttttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 7446797  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| |  |||||||||||||||||||| ||||||||||    
T  7446796 tttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 447 - 612
Target Start/End: Complemental strand, 8425902 - 8425737
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 18450829 - 18450991
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||      
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 443 - 585
Target Start/End: Original strand, 20444748 - 20444890
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  20444848 ttgcagttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 442 - 604
Target Start/End: Complemental strand, 22374872 - 22374709
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||||| ||||| |  ||| | ||| |||||||||| ||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 446 - 604
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  546 catttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 443 - 604
Target Start/End: Complemental strand, 28617160 - 28616998
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||| ||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 443 - 600
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||      
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtt 600  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  7446441 ttgcatttttcgtcatacc-cccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 440 - 604
Target Start/End: Complemental strand, 43058881 - 43058717
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  43058881 tttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcattt 43058782  T
Q  540 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    | ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  43058781 t-gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 434 - 585
Target Start/End: Complemental strand, 20440586 - 20440436
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 533  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  20440586 atttcttttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagtta 20440487  T
Q  534 tcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||| |||||| ||||||||||| | |||| ||||| ||||||||||||    
T  20440486 tcatttttgttgcagttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 447 - 604
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||| ||||| |  ||||| |||||||| |||||  |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 442 - 604
Target Start/End: Complemental strand, 11091067 - 11090904
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |     
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||| ||||||||||||| |||| ||||| |  ||||| ||||||||| |||| ||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 445 - 604
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  545 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||| ||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 442 - 570
Target Start/End: Complemental strand, 1978656 - 1978528
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||     
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  542 gttgcatttttcgtcctacctcccatttt 570  Q
    ||||||||||| ||||||||||| |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 445 - 585
Target Start/End: Complemental strand, 35781207 - 35781067
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||| |||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  545 gcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 444 - 585
Target Start/End: Original strand, 35779708 - 35779849
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||| ||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 442 - 562
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||     
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  542 gttgcatttttcgtcctacct 562  Q
    |||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 439 - 603
Target Start/End: Complemental strand, 3026011 - 3025848
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |||    
T  3026011 tttttggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatt 3025914  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
    || ||||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  3025913 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 438 - 604
Target Start/End: Complemental strand, 14432692 - 14432525
Alignment:
Q  438 cttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 537  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||| ||| |||||||||| ||    
T  14432692 cttttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattat 14432593  T
Q  538 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||| |||||||||||| |||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  14432592 ttttgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 447 - 603
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| | || |||||||||||||||||||||| |||||||||||||||  |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
    |||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 8972239 - 8972378
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||| ||||||||||||||| ||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    |||||||||| ||||| || ||||||| ||||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 446 - 586
Target Start/End: Original strand, 15551501 - 15551641
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  |||||||| |||||||||| ||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    |||||||||||| |||  ||||||||| |||||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 446 - 584
Target Start/End: Complemental strand, 15552596 - 15552459
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||| ||||||||||||||| ||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacg 584  Q
     |||||||||||||||  |||||||   |||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 441 - 612
Target Start/End: Complemental strand, 28143578 - 28143408
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||| |||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||| | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
      ||||| |||| ||||||| ||| |||||   ||||| |||||||||||||| ||||||||||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccc 28143408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 602
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||   ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || ||| || ||      
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttt 602  Q
    ||||| |||| ||||||||||| |||||   ||| | |||||||||||||| ||||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 442 - 609
Target Start/End: Complemental strand, 14942394 - 14942225
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--ttt 539  Q
    ||||||||||||||||||||||| |||  ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||  |||| | ||||||||  |||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    |  ||||| |||| ||||||| ||| |||||   ||||| ||| ||||||||||  ||||||||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttcaactccagaaatgcagagaaatcgcagttttagaccta 14942225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 497
Target Start/End: Original strand, 38007945 - 38008003
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  38007945 ttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 38008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 497
Target Start/End: Complemental strand, 42192790 - 42192736
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 519
Target Start/End: Original strand, 62952 - 63032
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 519  Q
    |||||||||||||||||||| |||||||    ||||| || |||||||||| ||||||| || ||||||||  ||||||||    
T  62952 ttttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaa 63032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 25336149 - 25336093
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  25336149 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 25336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 518
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 518  Q
    ||||||||||||||||||||||  ||||  || ||||| |||| || |||||||||||| |||| |||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 495
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||| |||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 497
Target Start/End: Complemental strand, 43216265 - 43216202
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||| ||| |||||||||||||||||| ||||| | |||||| || |||||||||| |||||||    
T  43216265 atttatttcaggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 497
Target Start/End: Complemental strand, 20128288 - 20128230
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||||||| |  ||||  || |||||||||| |||||||    
T  20128288 ttttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcct 20128230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 497
Target Start/End: Original strand, 42192235 - 42192293
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||| ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  42192235 tttttggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 6949990 - 6949937
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Complemental strand, 33921162 - 33921105
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  33921162 tttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 33921105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 24140223 - 24140167
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||| ||||||  | ||| || |||||||||| |||||||    
T  24140223 ttaggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcct 24140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 443 - 495
Target Start/End: Complemental strand, 44220192 - 44220140
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    |||||||||||||||||| |||||||  ||||| || |||||||||| |||||    
T  44220192 aggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtc 44220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 147; Significance: 3e-77; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 442 - 612
Target Start/End: Original strand, 1665 - 1835
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||     
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 441 - 604
Target Start/End: Complemental strand, 2215 - 2051
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  541 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 3e-77; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 442 - 612
Target Start/End: Complemental strand, 25447783 - 25447613
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccc 25447613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 439 - 612
Target Start/End: Complemental strand, 11153697 - 11153524
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  11153697 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatt 11153598  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11153597 tttgttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccc 11153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 441 - 612
Target Start/End: Original strand, 12234326 - 12234497
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12234426 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccc 12234497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 433 - 612
Target Start/End: Original strand, 25937659 - 25937838
Alignment:
Q  433 catttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 532  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937659 catttattttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 25937758  T
Q  533 atcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||| ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25937759 atcatttttgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 25937838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 446 - 612
Target Start/End: Original strand, 33109686 - 33109852
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 446 - 612
Target Start/End: Complemental strand, 46193948 - 46193782
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccc 46193782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 446 - 612
Target Start/End: Complemental strand, 38962362 - 38962196
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctaccc 38962196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 15523780 - 15523611
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| |    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 15523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 446 - 611
Target Start/End: Original strand, 23494445 - 23494610
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||  |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacc 23494610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 440 - 612
Target Start/End: Complemental strand, 22434725 - 22434555
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  22434725 tttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatcattt 22434627  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22434626 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 22434555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 446 - 609
Target Start/End: Original strand, 4219559 - 4219722
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||| ||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 609  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaaccta 4219722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 48526195 - 48526363
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  48526295 ttgcatttttcgtcctacc-cccattttattctccaaaaatgcagagaaatgacagttttagatctaccc 48526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 439 - 612
Target Start/End: Original strand, 51020792 - 51020965
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||||||||||||||||||| ||||| |||||||||  | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51020792 ttttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatt 51020891  T
Q  539 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  51020892 tttgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccc 51020965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 444 - 606
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 606  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 439 - 604
Target Start/End: Original strand, 22434174 - 22434340
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434174 tttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 22434273  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || |||| |||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  22434274 tttgttgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 447 - 612
Target Start/End: Complemental strand, 2118837 - 2118673
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||| |||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2118737 atttttcgtcctacc-cccattttattctccaaaaacgcagagaaataatagttttagacctaccc 2118673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 443 - 612
Target Start/End: Complemental strand, 22170482 - 22170314
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||| ||||||||||||||| |    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  22170383 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccc 22170314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 444 - 604
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 439 - 604
Target Start/End: Complemental strand, 4220109 - 4219943
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||||||    
T  4220109 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatt 4220010  T
Q  539 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    || ||||||||||||||||||||||| ||||| |  || ||||||||||||||||||||||||||||    
T  4220009 tttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 442 - 603
Target Start/End: Original strand, 15523233 - 15523395
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 603  Q
     |||||||||||||||||||||| ||||| |  ||| | |||||||||||||| |||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 444 - 604
Target Start/End: Complemental strand, 45082969 - 45082808
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 442 - 611
Target Start/End: Complemental strand, 54995614 - 54995446
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||||     
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatcatttt- 54995516  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    |||||||||||||||||| | |||||||||||||| ||||||||| |||||| | |||||||||||||||    
T  54995515 gttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctacc 54995446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 441 - 560
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  541 cgttgcatttttcgtcctac 560  Q
     |||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 441 - 604
Target Start/End: Complemental strand, 20471059 - 20470895
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  541 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 441 - 612
Target Start/End: Original strand, 45082429 - 45082598
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    ||||| |||||||| ||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  541 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  45082528 tgttgcatttttcgtcctacc-cccattttattctccaaaaacacagagaaatgacaattttagacctaccc 45082598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 444 - 604
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||| ||||| |  | ||| ||| |||||||||| ||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 442 - 604
Target Start/End: Original strand, 54995067 - 54995230
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||     
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||| | |||||||| ||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 447 - 604
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 442 - 570
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  542 gttgcatttttcgtcctacctcccatttt 570  Q
    ||||||||||||||||||||||| |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 442 - 593
Target Start/End: Complemental strand, 51021342 - 51021191
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  542 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 593  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 51021191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 443 - 570
Target Start/End: Complemental strand, 25938217 - 25938090
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  543 ttgcatttttcgtcctacctcccatttt 570  Q
    |||||||||| ||||||||||| |||||    
T  25938117 ttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 443 - 604
Target Start/End: Original strand, 11153145 - 11153307
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||| |    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  543 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||||||||||||||||||||| ||||| |  | ||| |||||||||||||| ||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 604
Target Start/End: Original strand, 2118295 - 2118454
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  546 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||| ||||| |  || || ||||||||||||||  |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 447 - 604
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||| |||||| ||||| |  ||||| ||||||||| ||||  |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 440 - 586
Target Start/End: Complemental strand, 20958408 - 20958264
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  20958408 tttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcattt 20958309  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    | ||||||||||| |||||||| |||||||||| |||||||||||||    
T  20958308 ttgttgcattttt-gtcctacc-cccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 441 - 558
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  541 cgttgcatttttcgtcct 558  Q
     |||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 461 - 604
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  461 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 560  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  561 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 445 - 585
Target Start/End: Complemental strand, 44892692 - 44892552
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  |||| |||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  545 gcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 462 - 585
Target Start/End: Complemental strand, 43243807 - 43243685
Alignment:
Q  462 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 561  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T
Q  562 tcccattttattctccaaaaacgc 585  Q
     |||||||||| ||||||||||||    
T  43243707 -cccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 442 - 585
Target Start/End: Original strand, 48293592 - 48293735
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |  ||||||||| |||||||  || ||||||||||||||||     
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    |||||||||||| |||| ||  ||||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 12503913 - 12503813
Alignment:
Q  512 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  612 c 612  Q
    |    
T  12503813 c 12503813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 442 - 586
Target Start/End: Complemental strand, 48713893 - 48713749
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    |||| ||||||||||||||  | |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||||||     
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||    
T  48713793 gttgcatttttcgtcctcccctccattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||||||||| ||||||||||||||| |    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  543 ttgcatttttcgtcctacc 561  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 442 - 580
Target Start/End: Original strand, 48708293 - 48708431
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||     
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaa 580  Q
    ||||||||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 447 - 580
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||| |||||||||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   |||||||||||||||||| |||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  547 atttttcgtcctacctcccattttattctccaaa 580  Q
    ||||||||||||||| || ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 462 - 582
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  462 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 561  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||| ||||| ||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  562 tcccattttattctccaaaaa 582  Q
     |||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 444 - 585
Target Start/End: Complemental strand, 48295088 - 48294946
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||  ||| ||||||||||||||| ||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  544 tgcattttt-cgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||| ||||||||| ||||||||||  |||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 444 - 580
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| ||||||||||  |||||| || |||||||  |||||| |||||| ||||| ||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  544 tgcatttttcgtcctacctcccattttattctccaaa 580  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 445 - 585
Target Start/End: Original strand, 44890518 - 44890658
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   ||||| ||||||  |||| |||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  545 gcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||| || |||| |||||||||| ||| ||||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 443 - 570
Target Start/End: Complemental strand, 10258433 - 10258306
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||  ||||  ||  ||||||||||||||| |    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  543 ttgcatttttcgtcctacctcccatttt 570  Q
    ||||| |||| ||| |||| || |||||    
T  10258333 ttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 451 - 582
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  451 ttacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcattt 550  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| ||| |||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  551 ttcgtcctacctcccattttattctccaaaaa 582  Q
    |||||| |||  |||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 443 - 514
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 514  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 502 - 585
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  502 ttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 553 - 612
Target Start/End: Complemental strand, 18752038 - 18751979
Alignment:
Q  553 cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccc 18751979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 17503973 - 17504141
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||| ||| ||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| |||||  || |||||| ||      
T  17503973 aggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtttt 17504071  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||| |||| ||||||||||| |||||   ||||| ||||| |||||||| ||||||||||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccc 17504141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 585
Target Start/End: Complemental strand, 44220861 - 44220781
Alignment:
Q  505 taaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    |||||||||||||||  |||||||| |||||||||| ||| |||||||||| ||||| |  ||||||| ||||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 540
Target Start/End: Original strand, 55189528 - 55189624
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttt 55189624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 585
Target Start/End: Complemental strand, 30598065 - 30597925
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctg-cccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||| |||||||||||||||||||||||||| || ||||||| || |||| ||| | |||||||| | ||||||||  |||| | |||||| ||||| |    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||| |||| |||||| | || ||||||   |||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacgc 30597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 497
Target Start/End: Complemental strand, 55677505 - 55677451
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||| || ||||| || |||||||||| |||||||    
T  55677505 aggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 495
Target Start/End: Complemental strand, 12593574 - 12593518
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 495  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  12593574 ttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 497
Target Start/End: Original strand, 44219377 - 44219428
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||||||||||||||||||||||| ||||  || |||||||||| |||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 45838537 - 45838600
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||| ||||||||||| |||||||||||||||| || ||||| || ||||||| || |||||||    
T  45838537 attttttttaggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcct 45838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 497
Target Start/End: Complemental strand, 46737203 - 46737148
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  46737203 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 46737148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Original strand, 33689825 - 33689882
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||| |  ||||| || |||||| ||| |||||||    
T  33689825 tttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 33689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 35193406 - 35193475
Alignment:
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||| |||| |||||| |||| |||||   || || |||||||||||||| ||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaacttcagaaacgcagagaaatgacagttttagacctaccc 35193475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 612
Target Start/End: Complemental strand, 17504369 - 17504337
Alignment:
Q  580 aaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||| ||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccc 17504337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 34789932 - 34789876
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    |||| ||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  34789932 ttagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 34789876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 41608964 - 41608908
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  41608964 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcct 41608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 143; Significance: 8e-75; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 446 - 612
Target Start/End: Original strand, 755 - 920
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt-gttg 853  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 434 - 612
Target Start/End: Complemental strand, 1296 - 1117
Alignment:
Q  434 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 533  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1296 atttcattttggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 1197  T
Q  534 tcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||| ||||||| ||||||||||||||| ||||| |  | ||| ||||||||| ||||  |||||||||||| ||||    
T  1196 tcatttttgttgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccaccc 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 143; Significance: 8e-75; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 442 - 612
Target Start/End: Complemental strand, 4754 - 4584
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 541  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  542 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 483 - 604
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  483 cacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaa 581  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  582 acgcagagaaataacagttttag 604  Q
    | |||||||||| ||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 440 - 612
Target Start/End: Complemental strand, 134222 - 134050
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||| |||||    
T  134222 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacattt 134123  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  134122 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 134050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 138; Significance: 8e-72; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 443 - 612
Target Start/End: Original strand, 64301 - 64470
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 64470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 447 - 604
Target Start/End: Complemental strand, 64847 - 64689
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||| || | ||||| |  ||||| ||||| ||| |||||||||||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttag 64689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 446 - 612
Target Start/End: Complemental strand, 205911 - 205746
Alignment:
Q  446 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 545  Q
    ||||||||||||||| ||||||   ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||| ||  |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  546 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    || |||| ||||||| ||| |||||   ||||||||||||||||||||  |||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccc 205746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 443 - 540
Target Start/End: Complemental strand, 210884 - 210787
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 540  Q
    |||||||||||||||||||||||||   ||||| || ||||| |||| ||||||||||  ||| |||  ||||||||| |||| | || |||||||||    
T  210884 aggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttt 210787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 126; Significance: 1e-64; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 440 - 612
Target Start/End: Complemental strand, 42707 - 42536
Alignment:
Q  440 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 539  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  42707 tttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcattt 42608  T
Q  540 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    | ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42607 ttgtttcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 42536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 447 - 612
Target Start/End: Original strand, 42172 - 42338
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  547 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    |||||| ||| ||||||| ||||| |  || || |||||||||||||| ||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctaccc 42338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 443 - 611
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| |    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  543 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18934 ttgcatttttcatcctacc-cccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 439 - 540
Target Start/End: Complemental strand, 19171 - 19070
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 538  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19171 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19072  T
Q  539 tt 540  Q
    ||    
T  19071 tt 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 447 - 612
Target Start/End: Complemental strand, 10414 - 10250
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||| ||||||||    
T  10314 atttttcgtcctacc-cccattttattctccaaaaattcagagaaatgacagttttaaacctaccc 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 447 - 570
Target Start/End: Original strand, 9935 - 10057
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||||||| | ||||||||| |||||||||||||||| ||| ||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  547 atttttcgtcctacctcccatttt 570  Q
    | ||||| |||||||||| |||||    
T  10035 a-ttttcatcctacctcctatttt 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 463 - 612
Target Start/End: Original strand, 10640 - 10789
Alignment:
Q  463 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 562  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  563 cccattttattctccaaaaacgcagagaaataacagttttagacctaccc 612  Q
     ||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccc 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 444 - 604
Target Start/End: Complemental strand, 11168 - 11007
Alignment:
Q  444 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 543  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  544 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    ||||||||||||||||||||| ||||| |  ||| | ||||||||||||||  |||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

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Target: scaffold1585 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 445 - 586
Target Start/End: Original strand, 568 - 709
Alignment:
Q  445 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 544  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||| |||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  545 gcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    | ||||||||||  ||||||||||| || |||||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

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Target: scaffold0113 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 443 - 570
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  443 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 542  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  543 ttgcatttttcgtcctacctcccatttt 570  Q
    ||||| |||||||||| || ||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

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Target: scaffold0157 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 461 - 604
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  461 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 560  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  561 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 604  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

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Target: scaffold0157; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 16564 - 16664
Alignment:
Q  512 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 611  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  612 c 612  Q
    |    
T  16664 c 16664  T

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Target: scaffold0057 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 62000 - 61862
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   || ||||| ||||||||| |||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  547 atttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    ||||||||||||||| |||||||| | ||||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

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Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 442 - 518
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  442 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 518  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold1696 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 448 - 585
Target Start/End: Original strand, 454 - 589
Alignment:
Q  448 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 547  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  ||||||||||||||||||| ||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  548 tttttcgtcctacctcccattttattctccaaaaacgc 585  Q
    |||||||||||| | |||||||||| ||| ||||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacgc 589  T

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Target: scaffold0076 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  447 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 546  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  547 a 547  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  493 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 586  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 497
Target Start/End: Complemental strand, 46819 - 46761
Alignment:
Q  439 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 497  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  46819 ttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 46761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 469
Target Start/End: Complemental strand, 58 - 30
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgt 469  Q
    |||||||||||||||||||||||||||||    
T  58 ttaggcttaattacacttttggtcctcgt 30  T

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Target: scaffold0830 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 469
Target Start/End: Complemental strand, 5380 - 5352
Alignment:
Q  441 ttaggcttaattacacttttggtcctcgt 469  Q
    |||||||||||||||||||||||||||||    
T  5380 ttaggcttaattacacttttggtcctcgt 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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