View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5426_low_2 (Length: 362)

Name: NF5426_low_2
Description: NF5426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5426_low_2
NF5426_low_2
[»] chr1 (27 HSPs)
chr1 (1-235)||(8138602-8138833)
chr1 (107-352)||(10136226-10136464)
chr1 (107-278)||(25844722-25844895)
chr1 (109-282)||(16648591-16648764)
chr1 (107-282)||(26926686-26926854)
chr1 (137-282)||(38622151-38622298)
chr1 (151-282)||(51040522-51040655)
chr1 (140-282)||(16036568-16036712)
chr1 (140-282)||(23191829-23191971)
chr1 (140-282)||(40166902-40167046)
chr1 (186-282)||(11807181-11807279)
chr1 (193-282)||(12260938-12261028)
chr1 (140-352)||(19797984-19798191)
chr1 (160-250)||(46697309-46697399)
chr1 (307-352)||(8138533-8138578)
chr1 (242-346)||(10141000-10141095)
chr1 (144-282)||(39586076-39586212)
chr1 (107-196)||(5100132-5100220)
chr1 (188-282)||(39199805-39199905)
chr1 (107-154)||(39199733-39199780)
chr1 (307-352)||(38621612-38621657)
chr1 (307-347)||(33300412-33300452)
chr1 (46-105)||(7670872-7670930)
chr1 (46-105)||(7709094-7709152)
chr1 (46-105)||(7709416-7709474)
chr1 (242-338)||(47450287-47450375)
chr1 (307-352)||(11807119-11807164)
[»] chr5 (31 HSPs)
chr5 (107-352)||(26668179-26668417)
chr5 (107-352)||(26939776-26940014)
chr5 (107-352)||(6154389-6154628)
chr5 (106-282)||(29166929-29167107)
chr5 (101-282)||(37247750-37247933)
chr5 (106-282)||(7452717-7452895)
chr5 (107-352)||(37536894-37537133)
chr5 (107-352)||(37646012-37646252)
chr5 (107-282)||(36424600-36424777)
chr5 (107-352)||(20180112-20180346)
chr5 (107-282)||(36430480-36430655)
chr5 (108-282)||(10759320-10759495)
chr5 (108-352)||(12103954-12104183)
chr5 (107-352)||(39519296-39519524)
chr5 (107-352)||(39523935-39524163)
chr5 (140-282)||(35678888-35679032)
chr5 (190-282)||(40148805-40148897)
chr5 (121-237)||(23757135-23757253)
chr5 (121-237)||(23822591-23822709)
chr5 (186-282)||(17162818-17162917)
chr5 (186-282)||(17159338-17159437)
chr5 (140-281)||(23689034-23689177)
chr5 (140-272)||(4872854-4872988)
chr5 (161-271)||(6511614-6511726)
chr5 (213-282)||(16115294-16115363)
chr5 (107-198)||(40150243-40150334)
chr5 (140-282)||(9725763-9725901)
chr5 (105-158)||(25668154-25668207)
chr5 (309-347)||(16115381-16115419)
chr5 (307-347)||(6511780-6511820)
chr5 (207-271)||(40567661-40567725)
[»] chr4 (36 HSPs)
chr4 (107-346)||(8694620-8694852)
chr4 (106-282)||(31728322-31728499)
chr4 (106-352)||(31274415-31274654)
chr4 (107-282)||(5270380-5270557)
chr4 (107-352)||(37263520-37263758)
chr4 (107-345)||(16421953-16422184)
chr4 (107-282)||(33467960-33468136)
chr4 (119-282)||(55252606-55252772)
chr4 (107-340)||(13064770-13064994)
chr4 (107-352)||(29349164-29349403)
chr4 (106-278)||(37258821-37258993)
chr4 (106-282)||(5925760-5925929)
chr4 (107-352)||(2820693-2820930)
chr4 (107-343)||(12822867-12823097)
chr4 (110-352)||(51698826-51699065)
chr4 (107-264)||(19907269-19907427)
chr4 (107-352)||(13060366-13060606)
chr4 (122-352)||(32081139-32081361)
chr4 (140-282)||(19107540-19107685)
chr4 (106-282)||(23094071-23094247)
chr4 (140-282)||(19102928-19103072)
chr4 (224-352)||(19907148-19907268)
chr4 (107-282)||(33462315-33462488)
chr4 (143-274)||(8029328-8029457)
chr4 (160-282)||(32220574-32220698)
chr4 (209-342)||(6943684-6943819)
chr4 (145-282)||(27183197-27183326)
chr4 (143-282)||(12875366-12875507)
chr4 (144-352)||(40408842-40409046)
chr4 (106-174)||(6943834-6943902)
chr4 (140-282)||(48275829-48275970)
chr4 (106-346)||(31766779-31766999)
chr4 (144-271)||(47245103-47245230)
chr4 (140-271)||(8028148-8028271)
chr4 (186-282)||(12878864-12878961)
chr4 (307-345)||(39216249-39216287)
[»] chr7 (35 HSPs)
chr7 (103-352)||(26342108-26342348)
chr7 (107-345)||(3046481-3046712)
chr7 (107-278)||(4931189-4931362)
chr7 (107-352)||(12256922-12257160)
chr7 (107-340)||(21672117-21672343)
chr7 (107-352)||(3880868-3881110)
chr7 (137-345)||(42625565-42625772)
chr7 (115-252)||(44508261-44508400)
chr7 (111-238)||(2595776-2595905)
chr7 (143-282)||(13313307-13313448)
chr7 (145-282)||(23247554-23247692)
chr7 (107-280)||(10392044-10392221)
chr7 (207-352)||(12181811-12181951)
chr7 (107-232)||(12802295-12802421)
chr7 (140-282)||(26286146-26286292)
chr7 (147-264)||(23151683-23151804)
chr7 (160-282)||(4580427-4580551)
chr7 (209-282)||(10387410-10387484)
chr7 (307-352)||(27239055-27239100)
chr7 (232-345)||(8269207-8269312)
chr7 (229-282)||(12800352-12800405)
chr7 (214-280)||(9814941-9815008)
chr7 (307-346)||(10392241-10392280)
chr7 (214-280)||(10716866-10716933)
chr7 (140-268)||(30259238-30259368)
chr7 (307-352)||(16373248-16373293)
chr7 (307-352)||(23247891-23247936)
chr7 (307-352)||(27246697-27246742)
chr7 (307-346)||(6590164-6590203)
chr7 (318-352)||(10387513-10387547)
chr7 (307-352)||(2595726-2595771)
chr7 (160-204)||(8269350-8269394)
chr7 (307-347)||(9815027-9815067)
chr7 (307-347)||(10716952-10716992)
chr7 (246-282)||(44508427-44508463)
[»] chr3 (25 HSPs)
chr3 (106-352)||(18472907-18473146)
chr3 (107-352)||(20520861-20521100)
chr3 (107-347)||(14437650-14437881)
chr3 (107-282)||(757321-757497)
chr3 (107-346)||(7570172-7570404)
chr3 (107-278)||(23660446-23660619)
chr3 (107-278)||(23665078-23665251)
chr3 (106-352)||(12970764-12971006)
chr3 (107-282)||(18468174-18468351)
chr3 (123-282)||(55326739-55326899)
chr3 (106-352)||(46964913-46965152)
chr3 (107-282)||(27709893-27710067)
chr3 (140-282)||(3656247-3656391)
chr3 (107-269)||(20175368-20175529)
chr3 (213-352)||(39774890-39775020)
chr3 (140-282)||(55432189-55432330)
chr3 (128-282)||(12964860-12965018)
chr3 (112-179)||(32473106-32473173)
chr3 (101-270)||(3426047-3426215)
chr3 (161-340)||(12111605-12111769)
chr3 (187-266)||(7860686-7860767)
chr3 (208-282)||(29351189-29351263)
chr3 (140-222)||(38891139-38891222)
chr3 (307-352)||(3419893-3419938)
chr3 (307-345)||(55432134-55432172)
[»] chr2 (30 HSPs)
chr2 (107-352)||(17974308-17974546)
chr2 (106-345)||(12797836-12798070)
chr2 (106-282)||(18345378-18345556)
chr2 (107-282)||(17967921-17968098)
chr2 (107-352)||(30651815-30652053)
chr2 (107-282)||(25496341-25496518)
chr2 (107-352)||(19891464-19891700)
chr2 (107-282)||(9184374-9184552)
chr2 (106-282)||(9179682-9179861)
chr2 (107-352)||(25477246-25477485)
chr2 (106-347)||(29678583-29678818)
chr2 (109-282)||(19896912-19897085)
chr2 (107-282)||(12361211-12361384)
chr2 (109-267)||(20101609-20101769)
chr2 (107-345)||(24536973-24537212)
chr2 (106-231)||(1933965-1934092)
chr2 (190-280)||(40846622-40846714)
chr2 (140-282)||(28604048-28604191)
chr2 (186-281)||(15446319-15446416)
chr2 (140-282)||(31329024-31329168)
chr2 (140-282)||(31335745-31335889)
chr2 (140-282)||(42925666-42925808)
chr2 (208-282)||(44630508-44630582)
chr2 (107-166)||(40846478-40846537)
chr2 (186-282)||(25637801-25637898)
chr2 (307-345)||(12002056-12002094)
chr2 (225-282)||(34495183-34495240)
chr2 (307-352)||(20103260-20103305)
chr2 (309-346)||(40846735-40846772)
chr2 (308-352)||(12361152-12361196)
[»] scaffold0054 (2 HSPs)
scaffold0054 (110-346)||(30083-30313)
scaffold0054 (140-280)||(26405-26547)
[»] scaffold0352 (1 HSPs)
scaffold0352 (107-282)||(8071-8248)
[»] chr6 (29 HSPs)
chr6 (107-282)||(17963515-17963692)
chr6 (128-352)||(12405338-12405556)
chr6 (107-282)||(16835118-16835296)
chr6 (106-352)||(11533658-11533897)
chr6 (106-352)||(11559168-11559407)
chr6 (109-352)||(20747256-20747493)
chr6 (107-352)||(11569650-11569887)
chr6 (128-282)||(17600342-17600495)
chr6 (128-282)||(6406838-6406994)
chr6 (109-347)||(19994344-19994575)
chr6 (112-282)||(22694347-22694517)
chr6 (102-347)||(2699066-2699306)
chr6 (164-352)||(25313487-25313671)
chr6 (164-352)||(26200981-26201165)
chr6 (112-282)||(33686606-33686777)
chr6 (107-352)||(11612861-11613100)
chr6 (140-271)||(12689942-12690074)
chr6 (109-269)||(11428933-11429094)
chr6 (140-276)||(12797772-12797914)
chr6 (207-352)||(5856885-5857022)
chr6 (189-282)||(22610473-22610568)
chr6 (144-282)||(19674735-19674874)
chr6 (208-346)||(17914498-17914628)
chr6 (307-352)||(11428866-11428911)
chr6 (109-173)||(5857033-5857096)
chr6 (307-352)||(4156486-4156531)
chr6 (242-280)||(14509941-14509979)
chr6 (106-179)||(29891917-29891991)
chr6 (311-352)||(22694518-22694559)
[»] chr8 (27 HSPs)
chr8 (106-278)||(40124850-40125024)
chr8 (128-345)||(38181260-38181471)
chr8 (121-345)||(2966492-2966710)
chr8 (107-282)||(1808413-1808589)
chr8 (110-347)||(15950528-15950766)
chr8 (106-282)||(44924877-44925055)
chr8 (107-282)||(1909904-1910081)
chr8 (107-282)||(28559074-28559250)
chr8 (115-282)||(26780066-26780234)
chr8 (110-282)||(28564258-28564429)
chr8 (122-282)||(18875357-18875519)
chr8 (186-282)||(33417492-33417590)
chr8 (107-266)||(7002623-7002783)
chr8 (153-257)||(17021243-17021348)
chr8 (153-257)||(17551680-17551785)
chr8 (106-154)||(33417603-33417651)
chr8 (107-282)||(23547568-23547738)
chr8 (307-352)||(19168665-19168710)
chr8 (307-352)||(22714149-22714194)
chr8 (106-167)||(17027165-17027226)
chr8 (106-167)||(17557657-17557718)
chr8 (307-345)||(44925072-44925110)
chr8 (186-270)||(17953183-17953267)
chr8 (193-282)||(24672364-24672453)
chr8 (307-347)||(17027046-17027086)
chr8 (307-347)||(17557538-17557578)
chr8 (208-282)||(33100550-33100623)
[»] scaffold0002 (2 HSPs)
scaffold0002 (107-278)||(5030-5203)
scaffold0002 (107-282)||(442897-443073)
[»] scaffold0690 (1 HSPs)
scaffold0690 (107-352)||(6132-6372)
[»] scaffold0240 (1 HSPs)
scaffold0240 (107-346)||(4877-5108)
[»] scaffold0057 (1 HSPs)
scaffold0057 (110-347)||(36027-36257)
[»] scaffold0011 (1 HSPs)
scaffold0011 (140-267)||(64885-65013)


Alignment Details
Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 8138833 - 8138602
Alignment:
Q  1 tgggtctgctgtatatgcaaaatccctatctttctcggcaacatataaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaag 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  8138833 tgggtctgctgtatatgcaaaatccctatctttctcagcaacatataaaggaaatctaaaaaccattcaaaaa-cgctacacacatcagaagccataaag 8138735  T
Q  101 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| | |||||||||||||||    
T  8138734 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaa---taagtaattatactttgatataatattgtgtgaattgaaaaaata 8138638  T
Q  201 gagtat-gggtcccacataaaatggaacacacacat 235  Q
    |||||| ||||| |||||||||| ||||||||||||    
T  8138637 gagtatcgggtcacacataaaatagaacacacacat 8138602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 10136464 - 10136226
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  10136464 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 10136365  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  10136364 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 10136267  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  10136266 a-------ttttattcgagaatatcactttccataaatttagcttatg 10136226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 278
Target Start/End: Complemental strand, 25844895 - 25844722
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  25844895 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 25844796  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 278  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  25844795 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 25844722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 16648591 - 16648764
Alignment:
Q  109 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 206  Q
    ||||||||||  |||||| |||||| | ||||| ||||||||||||     ||||||||||||||| |||| || | | ||||||||||||||||| |      
T  16648591 ttggaacattagtgtgattttggaaaataaattagaagattaaacacg---taattatactttgatctaatgttgtgtaaattgaaaaaatagagtgtag 16648687  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  16648688 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 16648764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 26926686 - 26926854
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||| || | ||||||||        |||      
T  26926686 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaactaattatactttgatttaatgttgtgtgaattga--------agt-g 26926776  T
Q  207 gggtcccacataaaatggaacacacacattagcaatg-tttaaattgaggtatttaa-ttttaaatacttgataatga 282  Q
    || ||||||||||||| ||||||||||||||| | || ||||||||| ||||||||| ||||||||||||||||||||    
T  26926777 ggatcccacataaaatagaacacacacattagtagtgttttaaattgtggtatttaatttttaaatacttgataatga 26926854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 137 - 282
Target Start/End: Complemental strand, 38622298 - 38622151
Alignment:
Q  137 aaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacaca 234  Q
    |||||||||||||||| ||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||  |||||||||||||| |||| |||| |    
T  38622298 aaattggaagattaaaaatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccacataaaatagaactcacata 38622199  T
Q  235 ttagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||| | |||||||| ||  |||||| ||||| |||||||||||||||    
T  38622198 ttagtagtgtttaaaatgcagtatttgattttgaatacttgataatga 38622151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 151 - 282
Target Start/End: Original strand, 51040522 - 51040655
Alignment:
Q  151 aacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaa 248  Q
    |||| ||| ||||||||||||||| |||| || | ||||||||||||||| ||| ||||  |||||||| |||| ||||||||||||||| | |||||||    
T  51040522 aacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccacatgaaatagaacacacacattagtagtgtttaa 51040621  T
Q  249 attgaggtatttaattttaaatacttgataatga 282  Q
    |||| | |||||||||||||||||||||||||||    
T  51040622 attgtgttatttaattttaaatacttgataatga 51040655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 16036712 - 16036568
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| ||| || |||||||| || | || | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  16036712 ttggaagattaaacaccaagtaactaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacatta 16036613  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | ||||||||| | ||||||||| ||||||||| |||||||||    
T  16036612 gtagtgtttaaatagtggtatttaaatttaaatacctgataatga 16036568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 23191829 - 23191971
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagc 239  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||||   |||||||||| |||||||||||||||     
T  23191829 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcacataaaatagaacacacacattagt 23191928  T
Q  240 aatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | ||||||| | | ||||||||||||||||||| |||||||||    
T  23191929 agtgtttaagtagtggtatttaattttaaatacctgataatga 23191971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 40167046 - 40166902
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| | |||| |||||||| || |||| | |||||||||||||||||  ||| |||||||| ||||||| ||| |||||||| |    
T  40167046 ttggaagattaaacaccaagttattaaactttgatctagtattgtgtgaattgaaaaaatagaatgtaggggtcccaaataaaatagaagacacacatca 40166947  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | ||||||||  | ||||||||||||||||||| |||||||||    
T  40166946 gtagtgtttaaacagtggtatttaattttaaatacctgataatga 40166902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 11807279 - 11807181
Alignment:
Q  186 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||||||||||||  ||   | ||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  11807279 tgaattgaaaaaatagagtgcggagattccacataaaatagaacacacacattagcagtgtttaaattgtggtatttaaatttaaatacttgataatga 11807181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 12261028 - 12260938
Alignment:
Q  193 aaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||||| |||| ||||||||||||| |||||||| |||||| | ||||||||| | |||||||||||||||||||||||||||||    
T  12261028 aaaaaatagagtgtggggtcccacataaaatagaacacactcattagtagtgtttaaatagtggtatttaattttaaatacttgataatga 12260938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 352
Target Start/End: Original strand, 19797984 - 19798191
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagtatggg---tcccacataaaatggaacacacacat 235  Q
    |||||| |||||| | ||| |||||||| |||||| |||| || | ||||||||||||| || ||| ||||   ||||||||||||| |||| | || ||    
T  19797984 ttggaaaattaaataccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaaataaagtgtggggggtcccacataaaatagaactcgcatat 19798082  T
Q  236 tagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcc 335  Q
    ||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       |||||||||||| | |||||||||||||    
T  19798083 tagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat------aattatttttatttgagaatatcacttcc 19798174  T
Q  336 cataaatttagcctatg 352  Q
    |||||||||||| ||||    
T  19798175 cataaatttagcttatg 19798191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 46697399 - 46697309
Alignment:
Q  160 taattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaat 250  Q
    |||||| |||||||| || | || | |||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||    
T  46697399 taattagactttgatttagtgttgtgtgaattgaaaaaatagagtatgggtcccacataaaatataacacatacattagtaatgtttaaat 46697309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 8138578 - 8138533
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  8138578 tattatttttattcgtgaatatcacttcccataaatttagcttatg 8138533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 10141095 - 10141000
Alignment:
Q  242 tgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaa 341  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||       ||||||||| |||||||||||||||||||    
T  10141095 tgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatta-------ttttattcgagaatatcacttcccataaa 10141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 39586076 - 39586212
Alignment:
Q  144 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaa 241  Q
    ||||||||| ||||| | |||| ||||||||||| |||| | | ||||||||||||||||| ||  ||||||||||||||| ||  ||| ||||||   |    
T  39586076 aagattaaagatcaagttattaaactttgatatagtattgtgt-aattgaaaaaatagagtgtggaggtcccacataaaataga--acaaacatta-ata 39586171  T
Q  242 tgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||| | | ||||||||||||||||| |||||||||    
T  39586172 tgtttaaatagtgatatttaattttaaatacctgataatga 39586212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 5100132 - 5100220
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaa 196  Q
    ||||| ||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||||||| || |||| |||| |||||||||||    
T  5100132 tgttgtaacattagtgtgatgttggaaaataaattggaagattaaaca-caagtaattatactttaatctaatgttatgtgaattgaaaa 5100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 39199805 - 39199905
Alignment:
Q  188 aattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagca----atgtttaaattgaggtatttaattttaaatacttgataatg 281  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||||||||  |     |||||||||||  ||||||| |||||||||||| ||||||    
T  39199805 aattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtgtgtttaaattgcagtatttacttttaaatacttaataatg 39199904  T
Q  282 a 282  Q
    |    
T  39199905 a 39199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 39199733 - 39199780
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaaca 154  Q
    ||||||||||||| |||||| | |||||||||||||||||||||||||    
T  39199733 tgttggaacattggtgtgatgtgggaagaaaaattggaagattaaaca 39199780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 38621657 - 38621612
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||    
T  38621657 tattatttttatttgagaatatcacttcccataaatttagcttatg 38621612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 33300412 - 33300452
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  33300412 tattatttttattcgtgaatatcaattctcataaatttagc 33300452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 7670872 - 7670930
Alignment:
Q  46 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 105  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7670872 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 7709094 - 7709152
Alignment:
Q  46 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 105  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7709094 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 7709474 - 7709416
Alignment:
Q  46 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 105  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7709474 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7709416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 47450287 - 47450375
Alignment:
Q  242 tgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccat 338  Q
    |||||||| || | |||||||||||||||||||||||||||        ||| | |||| |||| ||||||||||||||| ||||||||||| ||||    
T  47450287 tgtttaaactgcgttatttaattttaaatacttgataatga--------taaaaataataattattattatttttattcgagaatatcactttccat 47450375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 11807164 - 11807119
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||  |||||||| |||||||||||||||| ||||    
T  11807164 tattatttttattccggaatatcatttcccataaatttagcttatg 11807119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 4e-60; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 26668417 - 26668179
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  26668417 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 26668318  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  26668317 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 26668220  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  26668219 a-------ttttattcgagaatatcactttccataaatttagcttatg 26668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 26940014 - 26939776
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  26940014 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 26939915  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  26939914 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 26939817  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  26939816 a-------ttttattcgagaatatcactttccataaatttagcttatg 26939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 6154389 - 6154628
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||||||| |||||| |||| || | ||||||||||||||||||| |    
T  6154389 tgttggaacattgatgtgatgttggatgaaaaattggaaaattaaacatcaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgt 6154488  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  6154489 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 6154582  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
      ||||||||||||||| |||||||||||  |||||||||||| ||||    
T  6154583 --tattatttttattcgagaatatcactttacataaatttagcttatg 6154628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 106 - 282
Target Start/End: Original strand, 29166929 - 29167107
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  29166929 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtg 29167028  T
Q  206 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |  |||||| ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  29167029 tgagggtcctacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 29167107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 101 - 282
Target Start/End: Original strand, 37247750 - 37247933
Alignment:
Q  101 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaata 200  Q
    |||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||    
T  37247750 caaaactgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaata 37247849  T
Q  201 gagtat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||| |  ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  37247850 gagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 37247933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 106 - 282
Target Start/End: Complemental strand, 7452895 - 7452717
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  || |||||||||| |||| |||| || | |||||||||||||||||||     
T  7452895 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactctgatctaatgttgtgtgaattgaaaaaatagagtg 7452796  T
Q  206 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  7452795 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 7452717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 37536894 - 37537133
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||||||||||  | || |||||||| |||||||||||||||| |||||||||||||||||||| || | ||||||||||||||||||| |    
T  37536894 tgttggaacattgatgtgatgcttgatgaaaaattagaagattaaacatcaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgt 37536993  T
Q  207 -gggtcccacataaaatggaacacacac--attagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 303  Q
     |||||||||||||||| ||||||||||  ||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||    
T  37536994 ggggtcccacataaaatagaacacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattat 37537091  T
Q  304 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  37537092 ta-------ttttattcgagaatatcactttccataaatttagcttatg 37537133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 37646012 - 37646252
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  37646012 tgttggaacattgatgtgatgcttgatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 37646111  T
Q  207 --gggtcccacataaaatggaacacacac--attagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 302  Q
      |||||||||||||||| ||||||||||  ||||  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||    
T  37646112 gggggtcccacataaaatagaacacacacatattattagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaatta 37646209  T
Q  303 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  37646210 tta-------ttttattcgagaatatcactttccataaatttagcttatg 37646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 36424777 - 36424600
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||| ||| |||||||||| |||| |||| || | ||||||||||||||||||| |    
T  36424777 tgttggaacattgatgtgatgttggataaaaaattggaagattaaacaccaagtaattatactatgatctaatgttgtgtgaattgaaaaaatagagtgt 36424678  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
      ||||| |||||||||| ||||||||||||||| | || |||||||| |||||||||||||||||||||| ||||||    
T  36424677 gggggtctcacataaaatagaacacacacattagtagtgcttaaattgtggtatttaattttaaatacttggtaatga 36424600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 20180112 - 20180346
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| ||||||  ||| |||||||||||||||||||||| ||| |||||||||||| || |||| || | |||||||| |||||||  | |    
T  20180112 tgttggaacattggtgtgatgctggtagaaaaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgagaaaataggatgt 20180211  T
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 306  Q
    ||| |||||||||||| ||||||||||||||| | ||||||||||  ||||||||||||||||   ||||||||||        ||||||||||          
T  20180212 gggacccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaa---ttgataatga--taaaaataatagtaat------ 20180300  T
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  20180301 tattatttttattcgagaatatcacttcctataaatttagcttatg 20180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 36430655 - 36430480
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| |||   |||||||| ||| || |||| || | ||||||||||||||||||| |    
T  36430655 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaatatcg--taattatattttaatctaatgttgtgtgaattgaaaaaatagagtgt 36430558  T
Q  207 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||  |||||||||||||||||| ||| ||||||    
T  36430557 gggggtcccacataaaatagaacacacacattagtagtgtttaaattatggtatttaattttaaatatttggtaatga 36430480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 282
Target Start/End: Original strand, 10759320 - 10759495
Alignment:
Q  108 gttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat- 206  Q
    |||||||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||| |||||| |||| || | |||||| |||||||||||| |     
T  10759320 gttggaacattagtgtgatgttggaaaataaattggaagattaaaca-caagtaattatattttgatttaatgttgtgtgaattaaaaaaatagagtgta 10759418  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     |||||||||||||||| ||||| ||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  10759419 ggggtcccacataaaatagaacagacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatga 10759495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 108 - 352
Target Start/End: Complemental strand, 12104183 - 12103954
Alignment:
Q  108 gttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg 207  Q
    |||||||||||  |||||| |||||||||||||| |||||| ||||| ||| ||||||||||||||| |||| || | | ||| ||       ||||  |    
T  12104183 gttggaacattagtgtgatgttggaagaaaaattagaagatgaaacaccaagtaattatactttgatctaatgttgtgtaaataga-------gagtggg 12104091  T
Q  208 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 307  Q
    ||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||| |      |    
T  12104090 ggtcccacataaaatggaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtagt------t 12103999  T
Q  308 attatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||    
T  12103998 attatttttattcgagaatatcacttctcataaatttagcttatg 12103954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 39519524 - 39519296
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | ||||||||||||||||||| |    
T  39519524 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 39519425  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      ||||||| |||||||| |||||||||||          |||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  39519424 gggggtcccgcataaaatagaacacacaca----------ttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 39519337  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  39519336 a-------ttttattcgagaatatcactttccataaatttagcttatg 39519296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 39524163 - 39523935
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | ||||||||||||||||||| |    
T  39524163 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaaataaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 39524064  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      ||||||  |||||||| |||||||||||          |||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  39524063 gggggtccagcataaaatagaacacacaca----------ttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 39523976  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  39523975 a-------ttttattcgagaatatcactttccataaatttagcttatg 39523935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 35678888 - 35679032
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||||||| |||||| |||||||| || | || | ||||||||||||||||||| |  | |||||||||||||| ||||||||||||||    
T  35678888 ttggaagattaaacatcaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtaagagtcccacataaaatagaacacacacatta 35678987  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | ||||||||| | ||||||| ||||||||||| |||||||||    
T  35678988 gtagtgtttaaatagtggtattttattttaaatacctgataatga 35679032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 190 - 282
Target Start/End: Complemental strand, 40148897 - 40148805
Alignment:
Q  190 ttgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  40148897 ttgaaaaaatagagtgtgggtcccacataaaatagaacaaacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 40148805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 23757135 - 23757253
Alignment:
Q  121 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacata 218  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||| |||| || | ||||||||||||||||||| |  |||||||||| |    
T  23757135 tgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacaca 23757234  T
Q  219 aaatggaacacacacatta 237  Q
    |||| ||||||||||||||    
T  23757235 aaatagaacacacacatta 23757253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 23822591 - 23822709
Alignment:
Q  121 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacata 218  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||| |||| || | ||||||||||||||||||| |  |||||||||| |    
T  23822591 tgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacaca 23822690  T
Q  219 aaatggaacacacacatta 237  Q
    |||| ||||||||||||||    
T  23822691 aaatagaacacacacatta 23822709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 17162917 - 17162818
Alignment:
Q  186 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 282  Q
    ||||||||||||||||| | ||||  ||||||||||||| |||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||||    
T  17162917 tgaattgaaaaaatagaatgtgggagtcccacataaaatagaacacacacattagtggtgtttaaattgaggtatttaatttttaaatacctgataatga 17162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 17159437 - 17159338
Alignment:
Q  186 tgaattgaaaaaatagagtatgggt--cccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 282  Q
    ||||||||||||||||| | |||||  |||||||||||| ||| ||||||||||| | ||||| ||||||||||||||| |||||||||| |||||||||    
T  17159437 tgaattgaaaaaatagaatgtgggtgtcccacataaaatagaagacacacattagtagtgttttaattgaggtatttaatttttaaatacctgataatga 17159338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 23689177 - 23689034
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| |||  ||||| |||||||| || |  | | || ||||||||||| |||| ||||  ||||||||||||| |||||||||||||     
T  23689177 ttggaagattaaacaccaaacaattagactttgatctagtgatttgtggattgaaaaaattgagtgtggggatcccacataaaatagaacacacacattc 23689078  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatg 281  Q
    | | |||| |||||| ||||||||||||||||||| | ||||||    
T  23689077 gtagtgttaaaattgtggtatttaattttaaataccttataatg 23689034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 4872988 - 4872854
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||||  | ||| ||||||| ||||||||||| ||    
T  4872988 ttggaagattaaacaccaaattattaaactttgatttagtgttgtgtgaattgaaaaaatagagtgtgggggttccatataaaatagaacacacacaata 4872889  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatac 272  Q
    | | ||||||||| | | |||||||||||||||||    
T  4872888 gtagtgtttaaatagtgatatttaattttaaatac 4872854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 6511614 - 6511726
Alignment:
Q  161 aattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtat 258  Q
    ||||||| |||||| |||| || | ||||||||||||||  ||| ||||  ||||||||||||| |||| |||||||||| | |||||||||||  ||||    
T  6511614 aattatattttgatctaatgttgtgtgaattgaaaaaattaagtgtgggagtcccacataaaatagaactcacacattagtagtgtttaaattgcagtat 6511713  T
Q  259 ttaattttaaata 271  Q
    |||||||||||||    
T  6511714 ttaattttaaata 6511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 16115294 - 16115363
Alignment:
Q  213 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||| |||||||||||||||||| ||||||    
T  16115294 cacataaaatgaaacacacacattagtaatgtttaaattacggtgtttaattttaaatacttgctaatga 16115363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 40150334 - 40150243
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa 198  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||    
T  40150334 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa 40150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 9725763 - 9725901
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatgg--gtcccacataaaatggaacacacacatt 236  Q
    ||||||||||||||| ||| | |||| ||||||||||| | || | ||||||| |||||||||||| |||  |||||||||||||| |||||||||        
T  9725763 ttggaagattaaacaccaagttattaaactttgatatagtgttgtgtgaattgaaaaaaatagagtgtggatgtcccacataaaatagaacacaca---- 9725858  T
Q  237 agcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
       | ||||||||| | |||||||||||||||||||  ||||||||    
T  9725859 ---agtgtttaaatagtggtatttaattttaaataccggataatga 9725901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 25668154 - 25668207
Alignment:
Q  105 cctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaa 158  Q
    ||||||||||||||| |||  | |||||||||||||||||||||||||||||||    
T  25668154 cctgttggaacattggtgttgtgttggaagaaaaattggaagattaaacatcaa 25668207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 347
Target Start/End: Original strand, 16115381 - 16115419
Alignment:
Q  309 ttatttttattcgtgaatatcacttcccataaatttagc 347  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  16115381 ttatttatattcgtggatatcacttcccataaatttagc 16115419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 6511780 - 6511820
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    ||||||||||||| | ||||||||||||| |||||||||||    
T  6511780 tattatttttatttgagaatatcacttcctataaatttagc 6511820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 40567661 - 40567725
Alignment:
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaata 271  Q
    |||| ||| |||||||  ||||||||| |||| | || |||||||| ||||||||||||||||||    
T  40567661 gggtaccatataaaataaaacacacacgttagtagtgattaaattgtggtatttaattttaaata 40567725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 6e-59; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 107 - 346
Target Start/End: Complemental strand, 8694852 - 8694620
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  8694852 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 8694753  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  8694752 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 8694655  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttag 346  Q
    |       ||||||||| ||||||||||| ||||||||||||    
T  8694654 a-------ttttattcgagaatatcactttccataaatttag 8694620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 106 - 282
Target Start/End: Original strand, 31728322 - 31728499
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | |||||||||||||||||||     
T  31728322 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattataatttgatctaatgttgtgtgaattgaaaaaatagagtg 31728421  T
Q  206 t-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||    
T  31728422 tggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttcataatga 31728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 352
Target Start/End: Complemental strand, 31274654 - 31274415
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  31274654 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 31274555  T
Q  206 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 303  Q
    |  ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | |||        |||||||||||||    
T  31274554 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgacagtga--taaaaataatagtaattat 31274457  T
Q  304 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  31274456 ta-------ttttattcgagaatatcactttccataaatttagcttatg 31274415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 5270380 - 5270557
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  5270380 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagaatgt 5270479  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatga 282  Q
     |||||||||||||||| ||||||||||||||| | | ||||||||| ||||||||||||||||||| ||||||||||    
T  5270480 ggggtcccacataaaatagaacacacacattagtagtatttaaattgtggtatttaattttaaatactttgataatga 5270557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 37263520 - 37263758
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| || || ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  37263520 tgttggaacattgatgtgatgtttgatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 37263619  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  37263620 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 37263717  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  37263718 a-------ttttattcgagaatatcactttccataaatttagcttatg 37263758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 107 - 345
Target Start/End: Complemental strand, 16422184 - 16421953
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  16422184 tgttggaacattg-tgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 16422086  T
Q  207 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    |||  ||||||||||||| |||||||| |||||| | ||||||||||| ||||||||||||| |||||||||||||||        ||||||||||        
T  16422085 gggggtcccacataaaatagaacacacgcattagtagtgtttaaattgcggtatttaattttcaatacttgataatga--taaaaataatagtaat---- 16421992  T
Q  305 actattatttttattcgtgaatatcacttcccataaattta 345  Q
      ||||||||||||||| ||||||||||| |||||||||||    
T  16421991 --tattatttttattcgagaatatcactttccataaattta 16421953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 33467960 - 33468136
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  33467960 tgttggaacattagtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtaaattgaaaaaatagagtgt 33468059  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     || ||||||||||||| ||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  33468060 aggttcccacataaaatagaacacacacattagtagtgtttaaattgtagtatttaattttaaatacttgataatga 33468136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 119 - 282
Target Start/End: Complemental strand, 55252772 - 55252606
Alignment:
Q  119 gatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagtatgg--gtcccac 215  Q
    |||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||| |||| || | ||||||||||||| |||||| |||  |||||||    
T  55252772 gatgtgatgttggatgaaaaattggaagactaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaaatagagtgtggtggtcccac 55252673  T
Q  216 ataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  55252672 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 55252606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 340
Target Start/End: Original strand, 13064770 - 13064994
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||| |||||||||||||||||| | |||| | ||| ||||||||||||||| |||| ||   ||||||||||||||||||| |    
T  13064770 tgttggaacattggtgtgatgttggaagaaaaattggaaaaataaataccaagtaattatactttgatctaatgtt---tgaattgaaaaaatagagtgt 13064866  T
Q  207 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    |||  ||||||||||||| |||||||||||| |  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  13064867 gggggtcccacataaaatagaacacacacatcaatagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 13064960  T
Q  305 actattatttttattcgtgaatatcacttcccataa 340  Q
      ||||||||||||||||||||||||||||||||||    
T  13064961 --tattatttttattcgtgaatatcacttcccataa 13064994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 29349164 - 29349403
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||||||||  || ||||||||||||||| || | ||   ||||||||||||||||||| |    
T  29349164 tgttggaacattggtgtgatgttggaaggaaaactggaagattaaacactaagtaattatactttgat-tagtgttgagtgaattgaaaaaatagagtgt 29349262  T
Q  207 g-ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 305  Q
    | ||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||        ||||| |||||||||    
T  29349263 gaggtcccacataaaatagaactcacacattagcagtgtttaaattgcggtatttaattttaaatactggataatga-taaaaaataatattaattatta 29349361  T
Q  306 ctattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
          ||||||||||||||||||| |||||||||||||||| ||||    
T  29349362 -----ttttttattcgtgaatatcatttcccataaatttagcttatg 29349403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 106 - 278
Target Start/End: Original strand, 37258821 - 37258993
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||  ||||||| |||| || | |||||||||||||||||||     
T  37258821 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaatta--ctttgatctaatgttgtgtgaattgaaaaaatagagtg 37258918  T
Q  206 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 278  Q
    ||||  |||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  37258919 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 37258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 106 - 282
Target Start/End: Original strand, 5925760 - 5925929
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||||||| || | |||||||||||||| |        
T  5925760 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaaatgg---- 5925855  T
Q  206 tgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     |||||||||||||||| ||  ||||||||||| | ||||||||||  |||||||||||||||||||||||||||||    
T  5925856 -gggtcccacataaaataga--acacacattagtagtgtttaaattatggtatttaattttaaatacttgataatga 5925929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 2820930 - 2820693
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||  ||||||| ||||||||||||||||||| ||| |||||||| |||||| || | || | |||||||||||| |||||| |    
T  2820930 tgttggaacattggtgtgaagttggaaggaaaattggaagattaaacaccaagtaattata-tttgatctagtgttgtgtgaattgaaaaattagagtgt 2820832  T
Q  207 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| || ||||||||||        ||||||||||        
T  2820831 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaattatttgataatga--taaaaataatagtaat---- 2820738  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
      ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  2820737 --tattatttttatt-gtgaatatcacttcccataaatttagcttatg 2820693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 107 - 343
Target Start/End: Original strand, 12822867 - 12823097
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| |||||| | |||||||||||| ||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  12822867 tgttggaacattagtgtgatgttggaaaataaattggaagatcaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 12822966  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      |||||||||||||||| |||| |||||||||| | |||||||| || ||||||||||||||||||||| |||||||        ||||||||||        
T  12822967 gggggtcccacataaaatagaactcacacattagtagtgtttaaactgtggtatttaattttaaatactttataatga--taaaaataatagtaat---- 12823060  T
Q  305 actattatttttattcgtgaatatcacttcccataaatt 343  Q
      ||||||||||||||  |||||||||||||||||||||    
T  12823061 --tattatttttattccagaatatcacttcccataaatt 12823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 352
Target Start/End: Complemental strand, 51699065 - 51698826
Alignment:
Q  110 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 209  Q
    |||||||||  | |||| |||||| | |||||| ||||||||||| ||| ||||||||||||||  |||| ||   ||||||||||||||||||| ||||    
T  51699065 tggaacattagtttgatgttggaaaataaattgaaagattaaacaccaaataattatactttgaactaatgttgcgtgaattgaaaaaatagagtgtggg 51698966  T
Q  210 --tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 307  Q
      ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||         ||||||||||||||      
T  51698965 ggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatgcttgataatgataaaaaaaaaatagtaattatta-- 51698868  T
Q  308 attatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
        |||||||||| ||||||||||| ||||||||||||| ||||    
T  51698867 ---ttttttattcgagaatatcactttccataaatttagcttatg 51698826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 107 - 264
Target Start/End: Complemental strand, 19907427 - 19907269
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||| ||| |||||||| |||||| || | || | ||||||||||||||| ||| |    
T  19907427 tgttggaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatattttgatctagtgttgtgtgaattgaaaaaataaagtgt 19907328  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatt 264  Q
     ||||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  19907327 ggggtctcacataaaatagaacacacacattagcagtgtttaaattgcggtatttaatt 19907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 13060606 - 13060366
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaa-aaaatagagta 205  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||  ||| ||||||||||||||| ||||||| | ||||||||| ||||||||||     
T  13060606 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaaccccaagtaattatactttgatctaatattgtgtgaattgaaaaaaatagagtg 13060507  T
Q  206 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 303  Q
    ||  |||| |||||||||  |||| |||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       
T  13060506 tggtggtcacacataaaaaagaactcacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--taacaataatagtaat--- 13060412  T
Q  304 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
       | ||||||||||| | ||||||||||||||||||||||||| ||||    
T  13060411 ---tcttatttttatttgagaatatcacttcccataaatttagcttatg 13060366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 122 - 352
Target Start/End: Original strand, 32081139 - 32081361
Alignment:
Q  122 gtgatcttggaagaaaaattggaagattaaacatca-actaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacata 218  Q
    ||||| |||||| | ||||||||||||||||||| | | ||||||||||||||| |||| |    ||||||||||||||||||| |||  ||||||| ||    
T  32081139 gtgatgttggaaaataaattggaagattaaacataatagtaattatactttgatctaatgtg---tgaattgaaaaaatagagtgtggaggtcccacgta 32081235  T
Q  219 aaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttat 318  Q
    |||| |||| |||||||||| | ||||||||||| | ||||||||||||||||||||||||| |        ||||||||||      ||||||||||||    
T  32081236 aaatagaactcacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatta--taaaaataatagtaat------tattatttttat 32081327  T
Q  319 tcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||| ||||||||||||||||||||||||| ||||    
T  32081328 tcgagaatatcacttcccataaatttagcttatg 32081361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 19107685 - 19107540
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataa-tattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatt 236  Q
    ||||||||||||||| ||| | |||| |||||||| ||| |||| | ||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  19107685 ttggaagattaaacaccaagttattaaactttgatctaagtattgtgtgaattgaaaatatagagtgtggaggtcccacataaaatagaacacacacatt 19107586  T
Q  237 agcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    || | ||||||||| | ||||||||||||||||||| |||||||||    
T  19107585 agtagtgtttaaatagtggtatttaattttaaatacctgataatga 19107540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 282
Target Start/End: Complemental strand, 23094247 - 23094071
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||  || ||| |||||||| ||||||||||| |||  ||||| | |||||  |||| | || ||||||||||||||||||      
T  23094247 ctgttggaacattgatgtgaagttagaaaaaaaattgaaagattaaacaccaaggaattagaatttgagctaatgtgatatgaattgaaaaaatagagag 23094148  T
Q  206 tgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||  |||||||||||  |||||||||||||| | || |||||||  |  ||||||||||||||||||||||||||    
T  23094147 tggggtccacataaaataaaacacacacattagtagtgattaaattacgagatttaattttaaatacttgataatga 23094071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 19103072 - 19102928
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||  ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  19103072 ttggaagattaaactccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacatta 19102973  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
      | ||||||||| | | ||||||||||||||||| |||||||||    
T  19102972 atagtgtttaaatagtgatatttaattttaaatacctgataatga 19102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 352
Target Start/End: Complemental strand, 19907268 - 19907148
Alignment:
Q  224 gaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtg 323  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||        |||||| |||      |||||||||||||||||    
T  19907268 gaacacacacattagcagtgtttaaattgcggtatttaattttaaatacttgatgatga--taaaaataatagaaat------tattatttttattcgtg 19907177  T
Q  324 aatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||||||||||||| ||||    
T  19907176 aatatcacttcccataaatttagcttatg 19907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 33462315 - 33462488
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  ||| || || |||||||||||| |  |||||||| ||| |||||||| |||||| |||| || | ||||||||||||||||||| |    
T  33462315 tgttggaacattagtgtaatgttcgaagaaaaattgaataattaaacaccaaataattata-tttgatctaatgttgtgtgaattgaaaaaatagagtgt 33462413  T
Q  207 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||  |||||| |||||||  || ||||||||||| | |||||||||||  || |||||||||||||||||||||||||    
T  33462414 ggaggtccca-ataaaat--aagacacacattagtagtgtttaaattgcagtgtttaattttaaatacttgataatga 33462488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 274
Target Start/End: Original strand, 8029328 - 8029457
Alignment:
Q  143 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagca 240  Q
    |||||||||||| ||| |||||| |||||||| || |||| | ||||||||||||||||||| |  |||||||||||||||| |||||||||||    ||    
T  8029328 gaagattaaacaccaagtaattaaactttgatctagtattgtgtgaattgaaaaaatagagtgtgggggtcccacataaaatagaacacacaca----ca 8029423  T
Q  241 atgtttaaattgaggtatttaattttaaatactt 274  Q
     |||||| || | |||||||||||||||||||||    
T  8029424 gtgtttacatagtggtatttaattttaaatactt 8029457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 32220574 - 32220698
Alignment:
Q  160 taattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggta 257  Q
    |||||||| |||||| ||||||| | |||||| |||||||||||| ||||  ||||||||||||| ||||| ||||||||  | ||||||||||  | ||    
T  32220574 taattatattttgatctaatattgtgtgaattaaaaaaatagagtgtgggggtcccacataaaatagaacatacacattattagtgtttaaattccgata 32220673  T
Q  258 tttaattttaaatacttgataatga 282  Q
    |||||||||||||| ||||||||||    
T  32220674 tttaattttaaatatttgataatga 32220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 342
Target Start/End: Complemental strand, 6943819 - 6943684
Alignment:
Q  209 gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatg--agnnnnnnntaatagtaattattac 306  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||  ||||||||||| |||||||||||||||  |        |||||||| |  | |     
T  6943819 gtcccacataaaatagaacacatacattagtaatgtttaaattgctgtatttaatttcaaatacttgataatgataaaaaaaaataatagtagtagtaat 6943720  T
Q  307 tattatttttattcgtgaatatcacttcccataaat 342  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6943719 tattatttttattggtgaatatcacttcccataaat 6943684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 282
Target Start/End: Complemental strand, 27183326 - 27183197
Alignment:
Q  145 agattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgt 244  Q
    |||||||| | ||| |||||||||||||||||||| || | ||||||||||||      |  |||||||||||||||| |||||||||  |||| | |||    
T  27183326 agattaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaa------tgggggtcccacataaaatagaacacaca--ttagtagtgt 27183235  T
Q  245 ttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||  |||||||||||||||||||||||||||||    
T  27183234 ttaaattatggtatttaattttaaatacttgataatga 27183197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 12875507 - 12875366
Alignment:
Q  143 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagca 240  Q
    |||||||||||| ||| |||||| ||||| || || | || | ||||||||||||||||||| |  ||||||  |||||||| |||| |||||||||| |    
T  12875507 gaagattaaacaccaagtaattagactttcatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaatagaacccacacattagta 12875408  T
Q  241 atgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    || ||||||| | ||||||| |||||||||| ||||||||||    
T  12875407 atatttaaatagtggtatttgattttaaatatttgataatga 12875366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 352
Target Start/End: Complemental strand, 40409046 - 40408842
Alignment:
Q  144 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatg 243  Q
    |||||||||||  || | ||||||||||||| |||| || | |||||| ||||||||| ||  |||| ||| ||||||| ||||||||| ||||  | ||    
T  40409046 aagattaaacactaaatgattatactttgatctaatgttgtatgaattaaaaaaatagtgtg-gggtaccaaataaaatagaacacacatattattagtg 40408948  T
Q  244 tttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatt 343  Q
    ||||||||| |||||||||||||||||| ||||||    |       |||||||| |  | | ||||||||||||| ||||||||||||||||||| |||    
T  40408947 tttaaattgcggtatttaattttaaatatttgata---tggtaaaaataatagtagtagtaattattatttttattagtgaatatcacttcccatacatt 40408851  T
Q  344 tagcctatg 352  Q
    |||| ||||    
T  40408850 tagcttatg 40408842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 6943902 - 6943834
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgat 174  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  6943902 ctgttgcaacattagtgtgatgttggaagaaaaattggaagattaaacatcaagtaattatactttgat 6943834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 48275829 - 48275970
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtc-ccacataaaatggaacacacacattag 238  Q
    ||||||||||||||||||| | |||| |||||||| |  | || | ||||||||||||||||||| ||||   ||| |||||||  |||||||||  |||    
T  48275829 ttggaagattaaacatcaagttattaaactttgatcttgtgttgtgtgaattgaaaaaatagagtgtgggggtccatataaaatataacacacac--tag 48275926  T
Q  239 caatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    || ||||||||| | |||||||| |||||||||||| |||||||    
T  48275927 cagtgtttaaatagtggtatttatttttaaatacttaataatga 48275970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 346
Target Start/End: Complemental strand, 31766999 - 31766779
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagt 204  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||             ||||||||| |||| || | ||||||||||||| |||| |    
T  31766999 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaa-------------tactttgatctaatgtt-tgtgaattgaaaaaaatagatt 31766914  T
Q  205 atggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatgagnnnnnnntaatagtaatt 301  Q
     ||||  ||||||||||||| ||||||||||||||  | || |||||||| ||||||||| ||||||||||||||||||||        |||||||||||    
T  31766913 gtgggggtcccacataaaatagaacacacacattaatagtg-ttaaattgtggtatttaatttttaaatacttgataatga--taaaaataatagtaatt 31766817  T
Q  302 attactattatttttattcgtgaatatcacttcccataaatttag 346  Q
    ||||       ||||||||| ||||||||||| ||||||||||||    
T  31766816 atta-------ttttattcgagaatatcactttccataaatttag 31766779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 47245230 - 47245103
Alignment:
Q  144 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatg 243  Q
    |||||||||||  || | |||| | |||||| || |||| | |||||||||||||||| ||  || ||| | ||||||| ||||||||||||||  | ||    
T  47245230 aagattaaacactaagttattaaagtttgatctagtattgtgtgaattgaaaaaatagtgtggggatcctaaataaaatagaacacacacattattagtg 47245131  T
Q  244 tttaaattgaggtatttaattttaaata 271  Q
    ||||||| | | ||||||||||||||||    
T  47245130 tttaaatagcgatatttaattttaaata 47245103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 271
Target Start/End: Original strand, 8028148 - 8028271
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagc 239  Q
    |||||||||||||||   | |||||| ||||||||  ||| || | ||||||||||||||||||| |  |     |||||||| |||||||||||||||     
T  8028148 ttggaagattaaaca---agtaattaaactttgatcgaatgttgtgtgaattgaaaaaatagagtgtaag-----cataaaatagaacacacacattagt 8028239  T
Q  240 aatgtttaaattgaggtatttaattttaaata 271  Q
    | ||||||||| |  |||||||||||||||||    
T  8028240 agtgtttaaatagttgtatttaattttaaata 8028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 12878961 - 12878864
Alignment:
Q  186 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||||||||||||| | |  ||||||||||||| ||||| ||||||||  | |||||||||   | ||||| ||| |||||||||||||||||    
T  12878961 tgaattgaaaaaatagagtaagaggatcccacataaaatagaacatacacattaatagtgtttaaataatgatattt-attataaatacttgataatga 12878864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 39216249 - 39216287
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaattta 345  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  39216249 tattatttttattcgtgtatatcacttcgcataaattta 39216287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 103 - 352
Target Start/End: Complemental strand, 26342348 - 26342108
Alignment:
Q  103 aacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga 202  Q
    |||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||| |||||||||||| || ||||||||| ||||||||||||||||     
T  26342348 aacctgttggaacattaatgtgatgttggatgaaaaattcgaagattaaatatcaagtaattatactttaatttaatattatgtgaattgaaaaaatagt 26342249  T
Q  203 gtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 302  Q
    ||  |||||||||||||||| ||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||        ||||||||||||    
T  26342248 gtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatga--taaaaataatagtaatta 26342151  T
Q  303 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  26342150 tta-------ttttattcgagaatatcactttccataaatttagcttatg 26342108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 107 - 345
Target Start/End: Complemental strand, 3046712 - 3046481
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||||||||| ||| |||||||| ||||||||||  || | ||||||||||||||  ||| |    
T  3046712 tgttgaaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattataatttgatataaagttgtgtgaattgaaaaaattaagtgt 3046613  T
Q  207 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 305  Q
    ||| ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||| | |||| ||||    
T  3046612 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataataatta 3046521  T
Q  306 ctattatttttattcgtgaatatcacttcccataaattta 345  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  3046520 ctataatttttattcgtgaatatcacttcctataaattta 3046481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 107 - 278
Target Start/End: Complemental strand, 4931362 - 4931189
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||||||||||||||| || | ||||||||||||||||||| |    
T  4931362 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgt 4931263  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 278  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  4931262 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 4931189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 12257160 - 12256922
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||| |||||| | || |||||||||||| || ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  12257160 tgttggaacattggtgtgatgttggaatagaatttggaagattaatcaccaaataattatactttgatttaatgttgtgtaaattgaaaaaatagagtgt 12257061  T
Q  207 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 305  Q
    ||| ||||||||||||| |||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||         
T  12257060 ggggtcccacataaaatagaacacacgcattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat----- 12256968  T
Q  306 ctattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12256967 -tattatttttattcgtgaatatcacttcccataaatttagcttatg 12256922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 340
Target Start/End: Complemental strand, 21672343 - 21672117
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| |||  || | ||||||||||||||||| | |    
T  21672343 tgttggaacattggtgtgatgttggaagaaaaattggaagaataaacaccaagtaattatactttgatctaacgttgtgtgaattgaaaaaatagaatgt 21672244  T
Q  207 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 305  Q
    ||| ||||||||||||| || |||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||        ||||||||||         
T  21672243 gggatcccacataaaatagagcacacacattagtactgtttaaattgcggtatttaattttatatacttgataatga--taaaaataatagtaat----- 21672151  T
Q  306 ctattatttttattcgtgaatatcacttcccataa 340  Q
     ||||||||||||||||||||||||||||||||||    
T  21672150 -tattatttttattcgtgaatatcacttcccataa 21672117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 3881110 - 3880868
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||| | |||| |||| ||||||||||||||||||||||||| | ||| ||||||||||||||| |||||||   ||||||||||||||||||| |    
T  3881110 tgttggaatagtgatctgatgttggaagaaaaattggaagattaaataccaagtaattatactttgatctaatattgcgtgaattgaaaaaatagagtgt 3881011  T
Q  207 --gggtcccacataaaatggaacacaca---cattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatt 301  Q
      ||||| |||||||||| |||||||||   |||||| | || |||||||| | |||||||||||||||||||||||||||        ||||||||||     
T  3881010 gggggtctcacataaaatagaacacacacatcattagtagtgcttaaattgtgatatttaattttaaatacttgataatga--taaaaataatagtaat- 3880914  T
Q  302 attactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
         ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  3880913 -----tattatttttatttgtgaatatcacttcccataaatttagcttatg 3880868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 137 - 345
Target Start/End: Original strand, 42625565 - 42625772
Alignment:
Q  137 aaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacaca 234  Q
    |||||||||||||||||| ||| ||||||||||||||| |||| |||| ||||||||||||||||||| |  |||||||||||||||| |||| ||||||    
T  42625565 aaattggaagattaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtgggggtcccacataaaatagaactcacaca 42625664  T
Q  235 ttagcaatgtttaaattgag-----gtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatc 329  Q
    |||| | ||||||||||| |     ||||||||||||||||||||||||||||        ||||||||||      ||||||||||||||| |||||||    
T  42625665 ttagtagtgtttaaattgcggtgcagtatttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgagaatatc 42625756  T
Q  330 acttcccataaattta 345  Q
    |||| |||||||||||    
T  42625757 actttccataaattta 42625772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 252
Target Start/End: Original strand, 44508261 - 44508400
Alignment:
Q  115 cattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcc 212  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||| | ||||||||||||||||||| ||||  |||    
T  44508261 cattgatgtgatgttggatgaaaaattggaagattaaatatcaagtaattatactttgatctaatattgtgtgaattgaaaaaatagagtgtgggaatcc 44508360  T
Q  213 cacataaaatggaacacacacattagcaatgtttaaattg 252  Q
    || ||||||| ||||||||| ||||| | |||||||||||    
T  44508361 catataaaatagaacacacatattagtagtgtttaaattg 44508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 2595905 - 2595776
Alignment:
Q  111 ggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg- 209  Q
    ||||||||||||| || ||||||||||||||||||||||||||| ||| |||||| ||||| || |||| || | ||||||||||||||||||| ||||     
T  2595905 ggaacattgatgtaatgttggaagaaaaattggaagattaaacaccaaataattacactttaatctaatgttgtgtgaattgaaaaaatagagtgtgggt 2595806  T
Q  210 -tcccacataaaatggaacacacacattag 238  Q
     ||||||||||||| |||||||||||||||    
T  2595805 atcccacataaaatagaacacacacattag 2595776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 13313307 - 13313448
Alignment:
Q  143 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagca 240  Q
    ||||||||||||| || | | || |||||||| || |||| | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||| |    
T  13313307 gaagattaaacattaagttactaaactttgatttagtattgtgtgaattgaaaaaatagagtgtggatgtcccacataaaatagaacacacacattagta 13313406  T
Q  241 atgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     ||||||||| | |||||||||||||||||||||||||||||    
T  13313407 gtgtttaaatagtggtatttaattttaaatacttgataatga 13313448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 282
Target Start/End: Original strand, 23247554 - 23247692
Alignment:
Q  145 agattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaatggaacacacacattagcaatg 243  Q
    |||||||||| ||| ||||||||||||||| |||| |||| ||||||||||||||||||| |  |||||||| |||||| ||| ||| ||||||| | ||    
T  23247554 agattaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtatggtcccacctaaaatagaaaacaaacattagtagtg 23247653  T
Q  244 tttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  23247654 tttaaattacggtatttaattttaaatacttgataatga 23247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 107 - 280
Target Start/End: Original strand, 10392044 - 10392221
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa--tagagt 204  Q
    ||||||||||||| |||||  |||| || ||||| | ||||||||||| ||| ||||||||||||||| || | || | |||||||||||||  ||||||    
T  10392044 tgttggaacattggtgtgaagttgggaggaaaatcgaaagattaaacaccaagtaattatactttgatctagtgttgtgtgaattgaaaaaaaatagagt 10392143  T
Q  205 atg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataat 280  Q
     ||  || |||||||||||| |||||||||  ||| || ||||||||||| |||||||||||||||||||||||||||    
T  10392144 gtgagggccccacataaaatagaacacacatgttatcagtgtttaaattgcggtatttaattttaaatacttgataat 10392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 352
Target Start/End: Original strand, 12181811 - 12181951
Alignment:
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 306  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||| ||       
T  12181811 gggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaataat--- 12181905  T
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
     ||| |||||||||||||||||||||||| ||||||||||| ||||    
T  12181906 cattttttttattcgtgaatatcacttccaataaatttagcttatg 12181951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 12802421 - 12802295
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||||||| || |||| || | ||||||||||||||||||| |    
T  12802421 tgttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgaaaaaatagagtgt 12802322  T
Q  207 -gggtcccacataaaatggaacacaca 232  Q
     |||||||||||||||| |||| ||||    
T  12802321 ggggtcccacataaaatagaactcaca 12802295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 26286146 - 26286292
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa----tagagtatgggtcccacataaaatggaacacacacat 235  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | | |||||||||||    ||| ||  |||||||||||||||| ||||||||||||    
T  26286146 ttggaagattaaacaccaagtaattaaactttgatctagtgttgtataaattgaaaaaaaaaatagtgtgggggtcccacataaaatagaacacacacat 26286245  T
Q  236 tagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||| | ||||||||| | ||||||||||||||||||  |||||||||    
T  26286246 tagtagtgtttaaatagtggtatttaattttaaataactgataatga 26286292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 23151683 - 23151804
Alignment:
Q  147 attaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacac--attagcaat 242  Q
    |||||||||||| ||||||||||||||| |||| || | ||||||||||||||| ||| |||  ||||| |||||||| ||||||||||  ||||| | |    
T  23151683 attaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccgcataaaatagaacacacacatattagtagt 23151782  T
Q  243 gtttaaattgaggtatttaatt 264  Q
    |||||||||||| |||||||||    
T  23151783 gtttaaattgagatatttaatt 23151804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 4580551 - 4580427
Alignment:
Q  160 taattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggta 257  Q
    |||||| |||||||| || | || | |||||| |||||||||||| |  |||||||| ||||||| ||||||||||||||| | |||||| || | ||||    
T  4580551 taattaaactttgatttagtgttgtgtgaattaaaaaaatagagtgtaggggtcccatataaaatagaacacacacattagtagtgtttatatagtggta 4580452  T
Q  258 tttaattttaaatacttgataatga 282  Q
    ||||||| ||||||| |||||||||    
T  4580451 tttaattctaaatacctgataatga 4580427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 10387410 - 10387484
Alignment:
Q  209 gtcccacataaaatggaacacacacattagcaa-tgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||| ||||||| ||||||||| |||||||  ||||||||||| |||||||||||||||||| ||||||||||    
T  10387410 gtcccatataaaatagaacacacatattagcaggtgtttaaattgtggtatttaattttaaatatttgataatga 10387484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 27239100 - 27239055
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27239100 tattatttttattcgtgaatatcacttcccataaatttagcttatg 27239055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 8269312 - 8269207
Alignment:
Q  232 acattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcac 331  Q
    ||||||| | |||||||| || | |||||||||||||||||||||||||||        |||||||||||||||      ||||||||||||||||||||    
T  8269312 acattagaagtgtttaaactgcgatatttaattttaaatacttgataatga--taaaaataatagtaattatta------tttttattcgtgaatatcac 8269221  T
Q  332 ttcccataaattta 345  Q
    || |||||||||||    
T  8269220 tttccataaattta 8269207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 12800405 - 12800352
Alignment:
Q  229 cacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  12800405 cacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatga 12800352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 9814941 - 9815008
Alignment:
Q  214 acataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataat 280  Q
    ||||||||| ||||||| ||||||| | | ||||||||| ||||||||| ||||||||||||||||||    
T  9814941 acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataat 9815008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 346
Target Start/End: Original strand, 10392241 - 10392280
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttag 346  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  10392241 tattatttttattcatgaatatcacttcccataaatttag 10392280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 10716866 - 10716933
Alignment:
Q  214 acataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataat 280  Q
    ||||||||| ||||||| ||||||| | | ||||||||| ||||||||| ||||||||||||||||||    
T  10716866 acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataat 10716933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 30259368 - 30259238
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||| | ||| |||||| |||||||| || | || | | ||||||||||||||||| |||  |  ||||||||||| || |||| ||||||    
T  30259368 ttggaagattaaataccaagtaattaaactttgatctagtgttttgtaaattgaaaaaatagagtgtgggagatccacataaaatagatcacatacatta 30259269  T
Q  238 gcaatgtttaaattgaggtatttaattttaa 268  Q
    | | ||||||||| | | |||||||||||||    
T  30259268 gtagtgtttaaatagtgatatttaattttaa 30259238  T

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Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 16373293 - 16373248
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  16373293 tattatttttattcgtgtatatcactttccataaatttagcttatg 16373248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 23247891 - 23247936
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||    
T  23247891 tattatttttattcgtaaatatcacttcccataaattgagcttatg 23247936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 27246697 - 27246742
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||    
T  27246697 tattatttttattcgtggatatcacttctcataaatttagcttatg 27246742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 346
Target Start/End: Original strand, 6590164 - 6590203
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttag 346  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  6590164 tattatttttattcgtggatatcatttcccataaatttag 6590203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 352
Target Start/End: Original strand, 10387513 - 10387547
Alignment:
Q  318 ttcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||||||||||||||||||| ||||    
T  10387513 ttcgtgaatatcacttcccataaatttagcttatg 10387547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 2595771 - 2595726
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||| |||||||||| ||||||||||||||||||| ||||| ||||    
T  2595771 tattctttttattcgagaatatcacttcccataaacttagcttatg 2595726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 8269394 - 8269350
Alignment:
Q  160 taattatactttgatataatattatctgaattgaaaaaatagagt 204  Q
    ||||||||||||||| ||||||| | ||||||||| |||||||||    
T  8269394 taattatactttgatctaatattgtgtgaattgaataaatagagt 8269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 9815027 - 9815067
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  9815027 tattatttttattcatcaatatcacttctcataaatttagc 9815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 10716952 - 10716992
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  10716952 tattatttttattcatcaatatcacttctcataaatttagc 10716992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 44508427 - 44508463
Alignment:
Q  246 taaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  44508427 taaattgtggtatttaattttaaatatttgataatga 44508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 352
Target Start/End: Complemental strand, 18473146 - 18472907
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  || ||||||||||||||| |||| || | |||||||||||||||||||     
T  18473146 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 18473047  T
Q  206 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 303  Q
    |  |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||    
T  18473046 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattat 18472949  T
Q  304 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  18472948 ta-------ttttattcgagaatatcactttccataaatttagcttatg 18472907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 20521100 - 20520861
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  20521100 tgttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 20521001  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      |||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||        ||||||||||        
T  20521000 gggggtcccacataaaatagaatacacacattagtagtgtttaaattgcggtatttaactttaaatacttgataatga--taaaaataatagtaat---- 20520907  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
      ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  20520906 --tattatttttattcgagaatatcacttcccataaatttagcttatg 20520861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 107 - 347
Target Start/End: Original strand, 14437650 - 14437881
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |    || | ||||||||||||||||||| |    
T  14437650 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctg---ttgtgtgaattgaaaaaatagagtgt 14437746  T
Q  207 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    ||  ||| |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||| | |||| ||     
T  14437747 ggaggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--------taaaaataataata 14437838  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    | ||||||||||||||| ||||||||||| |||||||||||||    
T  14437839 attattatttttattcgagaatatcactttccataaatttagc 14437881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 757321 - 757497
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  757321 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 757420  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
      ||||| |||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  757421 gggggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 757497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 346
Target Start/End: Original strand, 7570172 - 7570404
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||| ||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  7570172 tgttggaacattaatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 7570271  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      ||||||| |||||||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  7570272 gggggtcccgcataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 7570369  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttag 346  Q
    |       ||||||||| ||||||||||| ||||||||||||    
T  7570370 a-------ttttattcgagaatatcactttccataaatttag 7570404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 23660446 - 23660619
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  23660446 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 23660545  T
Q  207 g--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 278  Q
    |  | |||||||||||||  |||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  23660546 ggagctcccacataaaataaaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 23660619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 23665078 - 23665251
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  23665078 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 23665177  T
Q  207 g--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 278  Q
    |  | ||||| ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  23665178 ggagctcccatataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 23665251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 352
Target Start/End: Original strand, 12970764 - 12971006
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||||| ||| ||||||||| ||||| |||| || | ||||||||||||||| |||     
T  12970764 ctgttggaacattgatatgatgttggatgaaaaatcggaagattaaacaccaagtaattatacgttgatttaatgttgtgtgaattgaaaaaataaagtg 12970863  T
Q  206 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatgagnnnnnnntaatagtaatta 302  Q
    ||  | ||||||||||||| |||||||||| |||| | ||||||||||| ||||||||||||| ||||||| ||||||||        ||||||||||      
T  12970864 tggtgatcccacataaaatagaacacacactttagtagtgtttaaattgcggtatttaattttaaaatactggataatga-taaaaaataatagtaat-- 12970960  T
Q  303 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
        ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12970961 ----tattatttttattcgtgaatatcacttcccataaatttagcttatg 12971006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 18468351 - 18468174
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaa-aaaatagagta 205  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | ||||||||| ||||||||||     
T  18468351 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaaatagagtg 18468252  T
Q  206 t-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | |||  | |||||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  18468251 tgggggtctacataatatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 18468174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 282
Target Start/End: Complemental strand, 55326899 - 55326739
Alignment:
Q  123 tgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaa 220  Q
    |||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| ||| ||||  |||||||||||    
T  55326899 tgatgttggatgaaaaattggaagattaaacaccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaatatagtgtgggggtcccacataaa 55326801  T
Q  221 atggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  55326800 atagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 55326739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 106 - 352
Target Start/End: Complemental strand, 46965152 - 46964913
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    |||||||||||||  ||| || |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  46965152 ctgttggaacattagtgtaatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 46965053  T
Q  206 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 303  Q
    |  ||| |||||||||||| |||| |||||||||  | |||||||| || |||||||||||||||||||||||||||||        ||| | |||| ||    
T  46965052 tgagggccccacataaaatagaactcacacatta-tagtgtttaaactgcggtatttaattttaaatacttgataatga--------taaaaataataat 46964962  T
Q  304 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
     |  |||||||||||||| |||||||||||| |||||||||||| ||||    
T  46964961 aataattatttttattcgagaatatcacttcacataaatttagcttatg 46964913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 27710067 - 27709893
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatat-aatattatctgaattgaaaaaatagagta 205  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| ||| || |||||||||||| | ||| || | |||||||||||||||||||     
T  27710067 tgttggaacattgatgtgatgttgaatgaaaaattggaagattaaacaccaagta-ttatactttgattttaatgttgtgtgaattgaaaaaatagagtg 27709969  T
Q  206 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||| ||||||||||||| ||||| ||   |||| | ||||||||||| |||||||||||||||||||||||||||||    
T  27709968 tggggtcccacataaaatagaacatacg--ttagtagtgtttaaattgtggtatttaattttaaatacttgataatga 27709893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 3656247 - 3656391
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||||||||||||||  ||| |||||||||||||||| ||||||  ||||||    
T  3656247 ttggaagattaaacaccaagtaattaaactttgatttagtgttgtgtgaattgaaaaaatagaatgtaggggtcccacataaaatagaacacggacatta 3656346  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  3656347 gtagtgtttaaatagtggtatttaattttaaatacctgataatga 3656391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 269
Target Start/End: Complemental strand, 20175529 - 20175368
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| |||||| | |||||| ||||||||||| ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  20175529 tgttggaacattagtgtgatgttggaaaataaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgttaattgaaaaaatagagtgt 20175430  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaa 269  Q
     |||| ||||||||||| ||  ||||||||||| | | |||||||||  |||||||||||||||    
T  20175429 ggggttccacataaaataga--acacacattagtagtatttaaattgcagtatttaattttaaa 20175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 352
Target Start/End: Original strand, 39774890 - 39775020
Alignment:
Q  213 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattat 312  Q
    |||||||||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||           
T  39774890 cacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatta------- 39774980  T
Q  313 ttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||| ||||||||||| ||||||||||||| ||||    
T  39774981 ttttattcgagaatatcactttccataaatttagcttatg 39775020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 55432330 - 55432189
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| |||||||| |||||| ||||  | | ||||||||||||||| ||| ||||  ||||||| ||||| |||||||||  |||    
T  55432330 ttggaagattaaacaccaagtaattata-tttgatctaatgctgtgtgaattgaaaaaataaagtgtgggggtcccacacaaaatagaacacaca--tta 55432234  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | |||||||||||  ||||||||||||||||| ||||||||||    
T  55432233 gtagtgtttaaattgcagtatttaattttaaatatttgataatga 55432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 282
Target Start/End: Original strand, 12964860 - 12965018
Alignment:
Q  128 ttggaagaaaaattggaa-gattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatg--ggtcccacataaaatg 223  Q
    ||||| |||||||| ||| ||||||||| ||| ||||||||||||||| |||| ||   ||||||| |||||||||||| ||  |||||||||||||||     
T  12964860 ttggatgaaaaattagaatgattaaacaccaagtaattatactttgatttaatgttgcatgaattgaaaaaaatagagtgtggtggtcccacataaaat- 12964958  T
Q  224 gaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatga 282  Q
     |||||| || |||| | ||||||||||| ||||||||||||| ||||| ||||||||||    
T  12964959 aaacacaaactttagtagtgtttaaattgcggtatttaattttaaaatatttgataatga 12965018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 32473106 - 32473173
Alignment:
Q  112 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataat 179  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  32473106 gaacattgatgtgatattggatgaaaaattggaagattaaacaccaagtaattatactttgatctaat 32473173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 270
Target Start/End: Complemental strand, 3426215 - 3426047
Alignment:
Q  101 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaata 200  Q
    ||||||||||||||||||  |||||| |||||| | |||||  ||||||||||| ||| |||||||||||| || | || || | ||||||   ||||||    
T  3426215 caaacctgttggaacattagtgtgatgttggaaaataaatttaaagattaaacaccaagtaattatactttaatcttatgttgtgtgaatt---aaaata 3426119  T
Q  201 ga--gtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaat 270  Q
    ||  ||  |||| ||||||||||| |||| |||||||||| | |||||||| || |||||| ||||||||||    
T  3426118 gaatgtgggggtaccacataaaatagaactcacacattagtagtgtttaaactgcggtattcaattttaaat 3426047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 340
Target Start/End: Original strand, 12111605 - 12111769
Alignment:
Q  161 aattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattt 260  Q
    ||||||||||||||||| |  | | |||||||||||| || ||| |||||| |||||||||| ||||||||      | ||||||||||||  |||||||    
T  12111605 aattatactttgatatagt--tgtgtgaattgaaaaagtaaagtgtgggtctcacataaaatagaacacacc-----gtaatgtttaaatttcggtattt 12111697  T
Q  261 aattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataa 340  Q
    |||||||||| |||||||||||        ||||||||||||||      ||||||||||||||||||||||||||||||    
T  12111698 aattttaaatgcttgataatga--taaaaataatagtaattatt------atttttattcgtgaatatcacttcccataa 12111769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 7860767 - 7860686
Alignment:
Q  187 gaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt 266  Q
    |||||||||||||||||| |||  |||||||||||||| ||||||||||||||  | ||||||||||  |||||||||||||    
T  7860767 gaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtttaaattatggtatttaatttt 7860686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 29351263 - 29351189
Alignment:
Q  208 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||||||||  |||||||||||||  | ||||||||| | ||||||||||||||||||  |||||||||    
T  29351263 ggtcccacataaaataaaacacacacattattagtgtttaaatagtggtatttaattttaaatatctgataatga 29351189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 38891222 - 38891139
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaat 222  Q
    ||||||||||||||| | | |||||| |||||||| |||| || | ||||||||||||||| ||| || |||||||||||||||    
T  38891222 ttggaagattaaacaccgagtaattaaactttgatctaatgttttgtgaattgaaaaaatatagtgtgaggtcccacataaaat 38891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 3419938 - 3419893
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||    
T  3419938 tattatttttattcgagaatatcacttcgcataaatttagcatatg 3419893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 345
Target Start/End: Complemental strand, 55432172 - 55432134
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaattta 345  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  55432172 tattatttttattcgagaatatcatttcccataaattta 55432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 17974308 - 17974546
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  17974308 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 17974407  T
Q  207 gg-gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatgagnnnnnnntaatagtaattatt 304  Q
    || |||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||        ||| | ||||| |     
T  17974408 ggtgtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatactttgataatga--------taaaaataattgta 17974499  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    | ||||| ||||||||| ||||||||||| ||||||||||||| ||||    
T  17974500 attatta-ttttattcgagaatatcactttccataaatttagcttatg 17974546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 106 - 345
Target Start/End: Complemental strand, 12798070 - 12797836
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||| |||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  12798070 ctgttggaatattagtgtgatgttggaagaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 12797971  T
Q  206 tg---ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 302  Q
    ||   ||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||      
T  12797970 tgggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat-- 12797875  T
Q  303 ttactattatttttattcgtgaatatcacttcccataaattta 345  Q
        ||||||||||||||| ||||||||||||| |||||||||    
T  12797874 ----tattatttttattcgagaatatcacttcctataaattta 12797836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 106 - 282
Target Start/End: Complemental strand, 18345556 - 18345378
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||| ||||||||||||     
T  18345556 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtg 18345457  T
Q  206 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||    
T  18345456 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttaataatga 18345378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 17967921 - 17968098
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||| || | |||||| |||||||||||| |    
T  17967921 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtgt 17968020  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatga 282  Q
     |||||||||||||||| ||||||||| ||||| | ||||||||||| ||||||||||||||||||| ||||||||||    
T  17968021 ggggtcccacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatactttgataatga 17968098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 30652053 - 30651815
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  30652053 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 30651954  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  30651953 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 30651856  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  30651855 a-------ttttattcgagaatatcactttccataaatttagcttatg 30651815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 25496341 - 25496518
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||| ||||||  |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||| | ||||||||||||||||||| |    
T  25496341 tgttgtaacatttgtgtgatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatattgtgtgaattgaaaaaatagagtgt 25496440  T
Q  207 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||  |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  25496441 ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 25496518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 19891464 - 19891700
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||  ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  19891464 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccatgtaattatactttgatctaatcttgtgtgaattgaaaaaatagaatgt 19891563  T
Q  207 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    ||  |||||||||||||| ||  ||||||||||  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  19891564 gggagtcccacataaaataga--acacacattattagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 19891659  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  19891660 a-------ttttattcgagaatatcactttccataaatttagcttatg 19891700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 9184374 - 9184552
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattg--aaaaaatagagt 204  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||| |||||||| |||| || | |||||||  ||||||||||||    
T  9184374 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattaaactttgatctaatgttgtgtgaattgaaaaaaaatagagt 9184473  T
Q  205 at--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  9184474 gtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 9184552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 106 - 282
Target Start/End: Original strand, 9179682 - 9179861
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattg--aaaaaatagag 203  Q
    ||||||||| |||||||||||  |||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||  |||||||||||    
T  9179682 ctgttggaatattgatgtgatggtggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaaaatagag 9179781  T
Q  204 tat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  9179782 tgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 9179861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 25477246 - 25477485
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||||||| ||||||||||||||| |||| || |  ||||| |||||||||||| |    
T  25477246 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaacatcaaataattatactttgatttaatgttgtgcgaattaaaaaaatagagtgt 25477345  T
Q  207 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    ||  |||  ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  25477346 ggtggtcttacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 25477439  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
      ||||||||||||||| ||||||||||| | ||||||||||| ||||    
T  25477440 --tattatttttattcgagaatatcactttctataaatttagcttatg 25477485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 106 - 347
Target Start/End: Complemental strand, 29678818 - 29678583
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||| |  ||  ||||||| |||||| |||| || | |||||||||||||||||||     
T  29678818 ctgttgcaacattagtgtgatgttggaagaaaaattggaagattaaatactaaggaattatattttgatctaatgttgtgtgaattgaaaaaatagagtg 29678719  T
Q  206 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 303  Q
    | ||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||        ||||||||||       
T  29678718 tagggatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga--taaaaataatagtaat--- 29678624  T
Q  304 tactattatttttattcgtgaatatcacttcccataaatttagc 347  Q
       |||||||||||||||  ||||||||||||||||||||||||    
T  29678623 ---tattatttttattcgaaaatatcacttcccataaatttagc 29678583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 282
Target Start/End: Complemental strand, 19897085 - 19896912
Alignment:
Q  109 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtat 206  Q
    ||||||||||| | |||| |||||||| ||| |||||||||||| ||||| |||||||| ||||||||||| || | |||||||||||||||||  ||      
T  19897085 ttggaacattggtatgatgttggaagagaaaatggaagattaaatatcaagtaattatattttgatataatgttgtgtgaattgaaaaaatagagcgtgg 19896986  T
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||||||||| ||  ||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  19896985 gggtcccacataaaataga--acacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga 19896912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 12361384 - 12361211
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||| | |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  12361384 tgttggaacattagtgtggtgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagaatgt 12361285  T
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||| ||||||||||| ||  | ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  12361284 gggttccacataaaataga--agacacattagtagtgtttaaattgtggtatttaattttaaataattgataatga 12361211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 109 - 267
Target Start/End: Original strand, 20101609 - 20101769
Alignment:
Q  109 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 206  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |      
T  20101609 ttggaaaattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtcg 20101708  T
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttta 267  Q
    |||| ||||||||||| ||||| ||||||||| | | ||||||||   |||||||||||||    
T  20101709 gggttccacataaaatagaacatacacattagtagtatttaaattactgtatttaatttta 20101769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 345
Target Start/End: Original strand, 24536973 - 24537212
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatatta-------tctgaattgaaaaaat 199  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||| ||| |||| || ||||||| |||| ||        | ||||||||||||||    
T  24536973 tgttggaacattggtgttatgttggaagaaaaattggaagattaaacaccaattaatcattctttgatctaatgtttaatgttgtgtgaattgaaaaaat 24537072  T
Q  200 agagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagt 297  Q
    ||||| ||||  |||||||||||||  |||||| ||||||| | |||||||| |  |||||||||||||||||||||||||||||        |||||||    
T  24537073 agagtgtgggggtcccacataaaatataacacatacattagtagtgtttaaactacggtatttaattttaaatacttgataatga--taaaaataatagt 24537170  T
Q  298 aattattactattatttttattcgtgaatatcacttcccataaattta 345  Q
    |||      |||||||||||||||||||||||| |||||||| |||||    
T  24537171 aat------tattatttttattcgtgaatatcatttcccatacattta 24537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 1933965 - 1934092
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  1933965 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 1934064  T
Q  206 tg--ggtcccacataaaatggaacacac 231  Q
     |  ||||||||||||||| ||||||||    
T  1934065 gggaggtcccacataaaatagaacacac 1934092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 40846622 - 40846714
Alignment:
Q  190 ttgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataat 280  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  40846622 ttgaaaaaatagagtgtggggatcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataat 40846714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 28604191 - 28604048
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaatggaacacacacattag 238  Q
    ||||||||||||||| ||| |||||| | |||||| || | || | |||||||||||||||||||||| ||||||||||||||| ||  ||||| ||||     
T  28604191 ttggaagattaaacaccaagtaattaaattttgatctagtgttgtgtgaattgaaaaaatagagtatgcggtcccacataaaatagattacacagattat 28604092  T
Q  239 caatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    || ||||||||| | | ||||||||||||||||| |||||||||    
T  28604091 cagtgtttaaatagtgatatttaattttaaatacatgataatga 28604048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 15446319 - 15446416
Alignment:
Q  186 tgaattgaaaaaatagagtat-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatg 281  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  15446319 tgaattgaaaaaatagagtgttgggtcccacataaaatagaacacatacattagtagtgtttaaattgtggtatttaatttttaaatacttgataatg 15446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 31329168 - 31329024
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |||    
T  31329168 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgtta 31329069  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  31329068 gtagtgtttaaatagtggtatttaattttaaatacatgataatga 31329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 31335889 - 31335745
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |||    
T  31335889 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgtta 31335790  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  31335789 gtagtgtttaaatagtggtatttaattttaaatacatgataatga 31335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 42925666 - 42925808
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | ||||||||||||||||||| ||  |||||||| |||||| ||  ||||||||||    
T  42925666 ttggaagattaaacaccaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaataga--acacacatta 42925763  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | | ||||||||| | | ||||||||||||||||| |||||||||    
T  42925764 gtagtgtttaaatagtgatatttaattttaaatacctgataatga 42925808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 44630508 - 44630582
Alignment:
Q  208 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||||||||| ||||||||||||||| | ||||||||| | ||| ||||||||||||||| |||||||||    
T  44630508 ggtcccacataaaatagaacacacacattagtattgtttaaatagtggtgtttaattttaaatacctgataatga 44630582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 40846478 - 40846537
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattat 166  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||    
T  40846478 tgttggaacattggtgtgatgttggaagaaaaattggaagattaaacaccaaataattat 40846537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 25637801 - 25637898
Alignment:
Q  186 tgaattgaaaaaatagag--tatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 282  Q
    |||||||||||| |||||  | ||||||||||||||||| ||  ||||||||||| | |||||||| || ||||||||| ||||||||||||||||||||    
T  25637801 tgaattgaaaaattagagattgtgggtcccacataaaataga--acacacattagtagtgtttaaactgcggtatttaatttttaaatacttgataatga 25637898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 12002056 - 12002094
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaattta 345  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12002056 tattatttttattcgtggatatcacttcccataaattta 12002094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 34495183 - 34495240
Alignment:
Q  225 aacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||| ||||  | |||||||||||  ||||||||||||||||||||||||||||    
T  34495183 aacacacatattattagtgtttaaattgcagtatttaattttaaatacttgataatga 34495240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 20103260 - 20103305
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||| | ||||||||||||| ||||||||||||| ||||    
T  20103260 tattatttttagtggtgaatatcactttccataaatttagcttatg 20103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 40846735 - 40846772
Alignment:
Q  309 ttatttttattcgtgaatatcacttcccataaatttag 346  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40846735 ttatttttatttgtgaatatcacttcctataaatttag 40846772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 12361196 - 12361152
Alignment:
Q  308 attatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||| || |||||||| ||||||||||||| ||||    
T  12361196 attatttttattcgagagtatcactttccataaatttagcttatg 12361152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 104; Significance: 9e-52; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 110 - 346
Target Start/End: Complemental strand, 30313 - 30083
Alignment:
Q  110 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatg 207  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | |||||||||||||||||  ||| |    
T  30313 tggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgtagg 30214  T
Q  208 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 307  Q
    | ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| ||| |||||||||        ||||||||||      |    
T  30213 gatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaactacatgataatga--taaaaataatagtaat------t 30122  T
Q  308 attatttttattcgtgaatatcacttcccataaatttag 346  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  30121 attatttttattcgagaatatcacttcccataaatttag 30083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 26547 - 26405
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| |||||| ||||| || ||   || | |||||||||||||||||||  ||  |||||||||||||| ||||||||||||||    
T  26547 ttggaagattaaacaccaaataattaaactttcatctagagttgtgtgaattgaaaaaatagagtgcggaggtcccacataaaatagaacacacacatta 26448  T
Q  238 gcaatgtttaaattgaggtatttaattttaaatacttgataat 280  Q
    | | ||||||||| ||||||||||||||||||||| |||||||    
T  26447 gtagtgtttaaatagaggtatttaattttaaatacctgataat 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 8248 - 8071
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||| ||| ||||| || |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  8248 tgttggaacattgatgcgatgttggatgataaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgt 8149  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
      ||||||||||||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  8148 gggggtcccacataagatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 17963515 - 17963692
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||| ||||||||||| ||||  | | ||||||||||||||||||| |    
T  17963515 tgtttgaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaactatactttgatctaatgatgtgtgaattgaaaaaatagagtgt 17963614  T
Q  207 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  17963615 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 17963692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 128 - 352
Target Start/End: Original strand, 12405338 - 12405556
Alignment:
Q  128 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatgga 225  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| || | | |||| |||||||||||| ||  | || || ||||||| ||    
T  12405338 ttggaagaaaaattggaagattaaacatcaactaattatattttgatctaatgttgtgttaattaaaaaaatagagtgtggagatcacaaataaaataga 12405437  T
Q  226 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaa 325  Q
    ||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||        ||||||||||      |||||||||||||||||||    
T  12405438 acacacacattagtagtgattaaattgaggtacttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgtgaa 12405529  T
Q  326 tatcacttcccataaatttagcctatg 352  Q
    |||||||||||||||||||||| ||||    
T  12405530 tatcacttcccataaatttagcttatg 12405556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 16835118 - 16835296
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagta 205  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | |||||| |||||| ||||||     
T  16835118 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattaaaaaaaatagagtg 16835217  T
Q  206 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  16835218 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 16835296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 352
Target Start/End: Original strand, 11533658 - 11533897
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    |||||||||||||  |||||| |||||  | ||||| |||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| |||     
T  11533658 ctgttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaataaagtg 11533757  T
Q  206 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    |||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||| | ||||| |     
T  11533758 tggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataattgta 11533849  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    | ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  11533850 attattatttttattcgagaatatcactttccataaatttagcttatg 11533897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 352
Target Start/End: Original strand, 11559168 - 11559407
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    |||||||||||||  |||||| |||||  | ||||| |||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| |||     
T  11559168 ctgttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaatacagtg 11559267  T
Q  206 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 304  Q
    |||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||| | ||||| |     
T  11559268 tggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataattgta 11559359  T
Q  305 actattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    | ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  11559360 attattatttttattcgagaatatcactttccataaatttagcttatg 11559407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 352
Target Start/End: Original strand, 20747256 - 20747493
Alignment:
Q  109 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 206  Q
    ||||||||||| ||| |  || |||| ||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |      
T  20747256 ttggaacattggtgttaagtttgaaggaaaattggaagattaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgtgg 20747355  T
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 306  Q
    |||||| ||||||||| ||||  ||||||||| | ||||||||||| |||||||||||||||||||||||||| ||         |||||||||          
T  20747356 gggtcctacataaaatagaacttacacattagtagtgtttaaattgcggtatttaattttaaatacttgataacga--taaaaacaatagtaat------ 20747447  T
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  20747448 tattatttttattcgtgaatatcacttcccataaatttagcatatg 20747493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 11569650 - 11569887
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| ||| || | ||||| |||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  11569650 tgttggaacattagtgtgatgttgcaa-ataaattagaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 11569748  T
Q  207 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 305  Q
    ||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||         
T  11569749 ggggtcccacataaaatagaacacacacattggaagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat----- 11569841  T
Q  306 ctattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
     ||||||||||||||| ||||||||||  ||||||||||||| ||||    
T  11569842 -tattatttttattcgagaatatcactgtccataaatttagcttatg 11569887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 128 - 282
Target Start/End: Complemental strand, 17600495 - 17600342
Alignment:
Q  128 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatgga 225  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||| |||| || | ||||||||||||||||||| |  |||||||||||||||| ||    
T  17600495 ttggaagaaaaattggaagattaaacaccaagtaatcatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgagggtcccacataaaataga 17600396  T
Q  226 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||| |||||||   ||||||||||| |||||||||||||||||| ||||||||||    
T  17600395 acacaaacattag---tgtttaaattgtggtatttaattttaaataattgataatga 17600342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 282
Target Start/End: Original strand, 6406838 - 6406994
Alignment:
Q  128 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatgga 225  Q
    ||||| ||||||||| ||||||||||| ||| ||||||||||||||| || | || | ||||||||||||||||||| ||||  |||  |||||||| ||    
T  6406838 ttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctattgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaataga 6406937  T
Q  226 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  6406938 acacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 6406994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 347
Target Start/End: Original strand, 19994344 - 19994575
Alignment:
Q  109 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg 208  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||  |  |||||||||||| ||  ||| |||| |||||| |||||||||||| |||    
T  19994344 ttggatcattggtgtgatgttggaagaaaaattggaagattaaacactaggtaattatactttaatcgaatgttatgtgaatt-aaaaaatagagtgtgg 19994442  T
Q  209 g--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 306  Q
    |  |||||| |||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||        ||||||||||          
T  19994443 gggtcccacgtaaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgattatga--taaaaataatagtaat------ 19994534  T
Q  307 tattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    ||||||||||||||||||||||||||| ||| | |||||||    
T  19994535 tattatttttattcgtgaatatcacttgccaaacatttagc 19994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 282
Target Start/End: Original strand, 22694347 - 22694517
Alignment:
Q  112 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtc 211  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||  |   ||||    
T  22694347 gaacattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagtttggaggtc 22694446  T
Q  212 ccacataaaatggaacacacacat-tagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||||| |||||||||||| ||| | |||||||||||  |||||||||| |||| ||||||||||||    
T  22694447 ccacataaaatagaacacacacatctag-agtgtttaaattgccgtatttaattataaaaacttgataatga 22694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 347
Target Start/End: Original strand, 2699066 - 2699306
Alignment:
Q  102 aaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaa-ata 200  Q
    ||||||||||||||||   | |||| |||||| | |||||||||||||||||||||| |||||||||||| || |||| || | ||||| | |||| |||    
T  2699066 aaacctgttggaacatcagtatgatgttggaaaataaattggaagattaaacatcaagtaattatactttaatctaatgttgtgtgaatggtaaaatata 2699165  T
Q  201 gagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagta 298  Q
    |||| ||||  ||||||||||||| |||  |||||||||| | ||||||||||| |||||||||||||||||||| |||||| |        ||||||||    
T  2699166 gagtgtgggggtcccacataaaatagaattcacacattagtagtgtttaaattgcggtatttaattttaaatactagataataa--taaaaataatagta 2699263  T
Q  299 attattactattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    ||      ||||||||||||||| |||||||||||||||||||||||||    
T  2699264 at------tattatttttattcgagaatatcacttcccataaatttagc 2699306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 164 - 352
Target Start/End: Original strand, 25313487 - 25313671
Alignment:
Q  164 tatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattta 261  Q
    |||||||||||||||| || | ||||||||||||||||||| ||  |||| |||||||||| ||||||| | ||||| | ||||||||||| ||||||||    
T  25313487 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 25313586  T
Q  262 attttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||||||||||        ||||||||||      ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  25313587 attttaaatacttgataatgataaaaaaataatagtaat------tattatttttattcgagaatatcacttcctataaatttagcttatg 25313671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 164 - 352
Target Start/End: Original strand, 26200981 - 26201165
Alignment:
Q  164 tatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattta 261  Q
    |||||||||||||||| || | ||||||||||||||||||| ||  |||| |||||||||| ||||||| | ||||| | ||||||||||| ||||||||    
T  26200981 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 26201080  T
Q  262 attttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||||||||||        ||||||||||      ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  26201081 attttaaatacttgataatgataaaaaaataatagtaat------tattatttttattcgagaatatcacttcctataaatttagcttatg 26201165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 112 - 282
Target Start/End: Original strand, 33686606 - 33686777
Alignment:
Q  112 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-gggt 210  Q
    ||||||| ||||||| |||||| | |||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| | ||||    
T  33686606 gaacattaatgtgatgttggaaaataaattggaagattaaacatcaaataattatactttgatctaattttgtgtgaattgaaaaaatagagtgtggggt 33686705  T
Q  211 cccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     |||||||||||  |||  ||| ||||| | |||||||| || |||||||| ||||||||||||| ||||||    
T  33686706 tccacataaaataaaacttacaaattagtagtgtttaaactgtggtatttagttttaaatacttggtaatga 33686777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 11612861 - 11613100
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatacttt--gatataatattatctgaattgaaaaaatagagt 204  Q
    |||||||||||||  ||||| ||||||| ||||||| || ||||||||| || ||||||||||||  ||| |||| |||| | |||||||||||||||||    
T  11612861 tgttggaacattg--gtgatgttggaaggaaaattgaaaaattaaacat-aagtaattatactttttgatctaatgttatataaattgaaaaaatagagt 11612957  T
Q  205 atgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 302  Q
     | |  ||||||||||||||  |||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||        ||||||| ||||    
T  11612958 gttgaggtcccacataaaataaaacacacacattagtagtgtttaaatttcggtatttaattttaaatacttgataatga--taaaaataatagtgatta 11613055  T
Q  303 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
         |||| |||||||||||||||||| || ||||||||||||| ||||    
T  11613056 -----attaattttattcgtgaatatcattttccataaatttagcttatg 11613100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 12690074 - 12689942
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg-gtcccacataaaatggaacacacacattag 238  Q
    |||||| |||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  12690074 ttggaaaattaaacaccaaattattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggagtcccacataaaatagaacacacacattag 12689975  T
Q  239 caatgtttaaattgaggtatttaattttaaata 271  Q
     | ||||||||| | ||||||||||||||||||    
T  12689974 tagtgtttaaatagcggtatttaattttaaata 12689942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 269
Target Start/End: Complemental strand, 11429094 - 11428933
Alignment:
Q  109 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 206  Q
    |||||||||||||||  | ||||| ||||||||||||||||||||| ||  ||||||||||||||| |||| ||   ||||||||||||||||||| |      
T  11429094 ttggaacattgatgtacttttggatgaaaaattggaagattaaacaccagataattatactttgatctaatgttgcgtgaattgaaaaaatagagtgtgg 11428995  T
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaa 269  Q
    ||||||||||| |||| || |||||||||| | | | |||||| || ||| ||||||||||||    
T  11428994 gggtcccacattaaatagagcacacacatttgtagtatttaaactgcggt-tttaattttaaa 11428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 276
Target Start/End: Original strand, 12797772 - 12797914
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatgga----acacacac 233  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||||||||||||||  || ||||||||||||||||| ||    ||||||||    
T  12797772 ttggaagattaaacaccaagtaattagactttgatctagtgttgtgtgaattgaaaaaatagagtgtgtgggtcccacataaaatagaaaacacacacac 12797871  T
Q  234 attagcaatgtttaaattgaggtatttaattttaaatacttga 276  Q
    | ||| | ||||||||| | |||||||||||||||||||||||    
T  12797872 actagtagtgtttaaatagtggtatttaattttaaatacttga 12797914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 352
Target Start/End: Complemental strand, 5857022 - 5856885
Alignment:
Q  207 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 306  Q
    |||||||||||||| | ||||| ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||        ||||||||||          
T  5857022 gggtcccacataaactagaacatacacattagtagtgtttaaattgcggtatttaattttaaataattgataatga--taaaaataatagtaat------ 5856931  T
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    | ||||||||||||| ||||||||||||||| ||||||||| ||||    
T  5856930 tgttatttttattcgagaatatcacttcccaaaaatttagcttatg 5856885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 22610568 - 22610473
Alignment:
Q  189 attgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||||||| | |||  || |||||||||||  |||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||    
T  22610568 attgaaaaaatagattgtggcagttccacataaaataaaacacacacattagtagtgtttaaattttggtatttaattttaaatacttgataatga 22610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 19674874 - 19674735
Alignment:
Q  144 aagattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatgggtcccacataaaatggaacacacacattagcaat 242  Q
    ||||||||||| ||| |||||| |||||||| || | || | ||||||| ||||||||| ||  |||||| ||||||||| |||||||||||| || | |    
T  19674874 aagattaaacaccaaataattaaactttgatctagtgttgtgtgaattggaaaaaatagtgtgggggtccgacataaaatagaacacacacatcagtagt 19674775  T
Q  243 gtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||   | ||||||||||||||||| | |||||||    
T  19674774 gtttaaataatgatatttaattttaaatacctaataatga 19674735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 346
Target Start/End: Complemental strand, 17914628 - 17914498
Alignment:
Q  208 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 307  Q
    ||||| ||||||||||||||||||||||||  | ||||| ||||  ||||||||||||||||||| |||| ||||        |||||| |||      |    
T  17914628 ggtcctacataaaatggaacacacacattaatagtgttttaattacggtatttaattttaaatacctgatgatga--taaaaataatagcaat------t 17914537  T
Q  308 attatttttattcgtgaatatcacttcccataaatttag 346  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  17914536 attatttttatttgtgaatatcacttcccataaatttag 17914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 11428911 - 11428866
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  11428911 tattatttttattcgtgaatatcacttcccataaatttagcttatg 11428866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 5857096 - 5857033
Alignment:
Q  109 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttga 173  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  5857096 ttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaa-taattatactttga 5857033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 4156486 - 4156531
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  4156486 tattatttttattcgagaatatcacttccgataaatttagcttatg 4156531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 14509979 - 14509941
Alignment:
Q  242 tgtttaaattgaggtatttaattttaaatacttgataat 280  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  14509979 tgtttaaattgtggtatttaattttaaatacttaataat 14509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 29891917 - 29891991
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaa-attggaagattaaacatcaactaattatactttgatataat 179  Q
    ||||| |||||||| |||||| ||| ||||||| ||||||||||||||||  || ||||| ||||||||| ||||    
T  29891917 ctgttagaacattggtgtgatgttgaaagaaaaaattggaagattaaacacaaagtaattgtactttgatctaat 29891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 22694518 - 22694559
Alignment:
Q  311 atttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||    
T  22694518 atttttattcgtgaatatcacttaccatatatttagcttatg 22694559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 106 - 278
Target Start/End: Original strand, 40124850 - 40125024
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | |||||||||||||||||||     
T  40124850 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtg 40124949  T
Q  206 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 278  Q
    |  ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  40124950 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 40125024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 128 - 345
Target Start/End: Original strand, 38181260 - 38181471
Alignment:
Q  128 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatgga 225  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| |||| || | ||||||||||||||| ||| || |  ||||||||||||| ||    
T  38181260 ttggaagaaaaattggaacattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgagagtcccacataaaataga 38181359  T
Q  226 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaa 325  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||      ||||||||||||||| |||    
T  38181360 acacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgagaa 38181451  T
Q  326 tatcacttcccataaattta 345  Q
    || |||||||||||||||||    
T  38181452 taccacttcccataaattta 38181471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 121 - 345
Target Start/End: Complemental strand, 2966710 - 2966492
Alignment:
Q  121 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacata 218  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||| || |||| ||||  |||||||||||||||||| ||  ||||||| |||    
T  2966710 tgtgatgttggaagaaaaattggaagattaaacatcaaataattatatttttatctaatgttatgggaattgaaaaaatagagtgtgagggtcccatata 2966611  T
Q  219 aaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttat 318  Q
    |||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||        | ||||||||      ||||||||||||    
T  2966610 aaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttaataatga--taaaaattatagtaat------tattatttttat 2966519  T
Q  319 tcgtgaatatcacttcccataaattta 345  Q
    ||||||||||||||||| |||||||||    
T  2966518 tcgtgaatatcacttcctataaattta 2966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 1808589 - 1808413
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||| ||| |    
T  1808589 tgttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgt 1808490  T
Q  207 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||| ||||| ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  1808489 ggggtcccatataaaatagaacacacacattagaagtgtttaaattgcggtatttaattttaaatatttgataatga 1808413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 110 - 347
Target Start/End: Original strand, 15950528 - 15950766
Alignment:
Q  110 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatc----aactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||| |    || ||||||||||||||| |||| || | |||||||||||||||||||     
T  15950528 tggaacattgatgtgatgttggatgaaaaattggaagactaaacaccaagtaattaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 15950627  T
Q  206 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga-gnnnnnnntaatagtaatta 302  Q
    ||  ||| ||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||| |       ||||||||||      
T  15950628 tggaggtgccacataaaatagaacacacacattaatagtgtttaaattgcggtatttaattttaaatacttgataatgatgataaaaataatagtaat-- 15950725  T
Q  303 ttactattatttttattcgtgaatatcacttcccataaatttagc 347  Q
        ||||||||||||||| ||||||||||||||||| |||||||    
T  15950726 ----tattatttttattcgagaatatcacttcccatatatttagc 15950766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 106 - 282
Target Start/End: Original strand, 44924877 - 44925055
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    |||||||||||||  |||||| |||||| | ||||||||||||||||||  ||  |||||||||||||| |||| || | |||||||||||| ||||||     
T  44924877 ctgttggaacattagtgtgatgttggaaaataaattggaagattaaacactaatcaattatactttgatctaatcttgtgtgaattgaaaaattagagtt 44924976  T
Q  206 tgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||  |||||||||||||| ||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  44924977 tggaggtcccacataaaatagaaaacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 44925055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 1909904 - 1910081
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||  | |||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  1909904 tgttggaacattagtatgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 1910003  T
Q  207 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||  ||||||||| |||| || | |||||||||| | ||||||||  | |||||||||||||||||||||||||||||    
T  1910004 ggatgtcccacatgaaatagagctcacacattagtagtgtttaaacagtggtatttaattttaaatacttgataatga 1910081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 28559074 - 28559250
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||| |||||||| || || |||||||||||||||||||||||| ||| || ||||||||| || |||| || | |  || ||||||||||||| |    
T  28559074 tgttggaaaattgatgtaatgttcgaagaaaaattggaagattaaacaccaaata-ttatactttaatctaatgttgtgtacatggaaaaaatagagtgt 28559172  T
Q  207 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||  |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  28559173 ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga 28559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 26780234 - 26780066
Alignment:
Q  115 cattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggt--cc 212  Q
    ||||||||| || ||||||||||||||  |||||||||||  || |||||||||| | || |||| || | |||||||||||  |||||| |||||  ||    
T  26780234 cattgatgtaatgttggaagaaaaattaaaagattaaacactaagtaattatactctaatttaatgttgtgtgaattgaaaac-tagagtgtgggtgtcc 26780136  T
Q  213 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  26780135 cacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 26780066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 282
Target Start/End: Original strand, 28564258 - 28564429
Alignment:
Q  110 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 209  Q
    ||||||||| || | || ||||||||||||||||||||||||||| ||| || |||||||||||| |||| || | |  ||||||||||||| ||   ||    
T  28564258 tggaacattcatataatgttggaagaaaaattggaagattaaacaccaaata-ttatactttgatctaatgttgtgtacattgaaaaaatagtgtggagg 28564356  T
Q  210 tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    | ||||||||||| ||||||||||||||| | ||||||||||  |||||||||||||||||| ||||||||||    
T  28564357 ttccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaatatttgataatga 28564429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 18875357 - 18875519
Alignment:
Q  122 gtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataa 219  Q
    ||||| ||||||||||||||||||||||||| |   | |||||| | |||||| |||| || | |||||||||||||||| || |  ||||||||||||     
T  18875357 gtgatgttggaagaaaaattggaagattaaatactgagtaattaaattttgatctaatgttgtgtgaattgaaaaaatagtgtgtaggggtcccacatac 18875456  T
Q  220 aatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  18875457 aatagaacacacatattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 18875519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 33417590 - 33417492
Alignment:
Q  186 tgaattgaaaaaatagagt--atgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    |||||||||||||||||||  ||||||| |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  33417590 tgaattgaaaaaatagagtgtatgggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 33417492  T

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Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 7002783 - 7002623
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| |||||  ||  ||||||| ||| ||||||||||| ||| |||||| |||||||| || |||| | ||||||||||||||||||| |    
T  7002783 tgttggaacattggtgtgaagtttaaagaaaa-ttgaaagattaaacaccaagtaattagactttgatctagtattgtgtgaattgaaaaaatagagtgt 7002685  T
Q  207 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt 266  Q
    |||  || |||||||||| ||| ||| ||||||| | ||||||||||| |||||||||||||    
T  7002684 ggggatctcacataaaatagaatacatacattagtagtgtttaaattgtggtatttaatttt 7002623  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 17021348 - 17021243
Alignment:
Q  153 catcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaatt 251  Q
    |||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  17021348 catcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggggtcccacataaaatagaacacacacattagtagtgtttaaatt 17021249  T
Q  252 gaggta 257  Q
    | ||||    
T  17021248 gcggta 17021243  T

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Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 17551785 - 17551680
Alignment:
Q  153 catcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaatt 251  Q
    |||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  17551785 catcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggggtcccacataaaatagaacacacacattagtagtgtttaaatt 17551686  T
Q  252 gaggta 257  Q
    | ||||    
T  17551685 gcggta 17551680  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 33417651 - 33417603
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaaca 154  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  33417651 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaaca 33417603  T

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Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 23547568 - 23547738
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||||||||| | | || ||| ||||||||||| ||||||||||||  | |||||||| ||| || |||| ||   ||||| ||||||||||| |||    
T  23547568 tgttggaacattggtttaatgttgaaagaaaaattgaaagattaaacattgaataattatattttaatctaatgttgcatgaatcgaaaaaatagaatat 23547667  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
      ||||| |||||||| | ||||||| |  |||      ||||||||| |||||||||||||||||||||||||||||    
T  23547668 cggggtctcacataaattagaacacata--ttaa-----tttaaattgcggtatttaattttaaatacttgataatga 23547738  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 19168710 - 19168665
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||    
T  19168710 tattatttttattctagaatatcacttcccataaatttagcttatg 19168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 22714149 - 22714194
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||    
T  22714149 tattatttttattcatggatatcacttcccataaatttagcttatg 22714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 17027226 - 17027165
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaag-aaaaattggaagattaaacatcaactaattata 167  Q
    ||||||||||||| ||||||| ||||| | |||||||||||||||||||| ||| ||||||||    
T  17027226 ctgttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattata 17027165  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 17557718 - 17557657
Alignment:
Q  106 ctgttggaacattgatgtgatcttggaag-aaaaattggaagattaaacatcaactaattata 167  Q
    ||||||||||||| ||||||| ||||| | |||||||||||||||||||| ||| ||||||||    
T  17557718 ctgttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattata 17557657  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 44925072 - 44925110
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaattta 345  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  44925072 tattatttttattcgagaatatcatttcccataaattta 44925110  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 17953183 - 17953267
Alignment:
Q  186 tgaattgaaaaaatagagtat-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaat 270  Q
    ||||||||||||||||||| | |||| ||||| ||||| |||||||||||| || | ||||| ||| | ||||||| |||||||||    
T  17953183 tgaattgaaaaaatagagtgtggggtaccacaaaaaatagaacacacacatcagtagtgttt-aatagtggtattttattttaaat 17953267  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 24672364 - 24672453
Alignment:
Q  193 aaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
    ||||||||||||  |||||||| ||||||| || ||| || || |  | ||||||||||| | ||||||||| ||||||||| |||||||    
T  24672364 aaaaaatagagtgggggtcccaaataaaatagagcacgcagatcaatagtgtttaaattgtgatatttaattgtaaatacttaataatga 24672453  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 17027086 - 17027046
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  17027086 tattatttttattcgagaatatcacttttcataaatttagc 17027046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 17557578 - 17557538
Alignment:
Q  307 tattatttttattcgtgaatatcacttcccataaatttagc 347  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  17557578 tattatttttattcgagaatatcacttttcataaatttagc 17557538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 33100623 - 33100550
Alignment:
Q  208 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatga 282  Q
    ||||||||||||||| ||| |||||  |||  ||| |||||||||  |||||||||||| ||||||||||||||||    
T  33100623 ggtcccacataaaatagaatacaca--ttaataatctttaaattgcagtatttaatttttaaatacttgataatga 33100550  T

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Target: scaffold0002 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 107 - 278
Target Start/End: Complemental strand, 5203 - 5030
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| | | ||||||||||| |||| || | ||||||||||||||||||| |    
T  5203 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagttaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 5104  T
Q  207 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 278  Q
      ||||||| |||||||| |||||| |||||||| | ||||||||||| |||||||||||||||||||||||||    
T  5103 gggggtcccgcataaaatagaacactcacattagtagtgtttaaattgtggtatttaattttaaatacttgata 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 442897 - 443073
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    |||||||| |||  |||||| |||||| | ||||||||||||||||||| || ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  442897 tgttggaatattactgtgatgttggaaaataaattggaagattaaacattaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 442996  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 282  Q
     |||||||||||||||| |||||||||||||||    |||||||||| |||||||||||||||||| ||||||||||    
T  442997 ggggtcccacataaaatagaacacacacattagttgggtttaaattgtggtatttaattttaaatatttgataatga 443073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 6372 - 6132
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaa-ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 205  Q
    ||||||||||||| || ||| |||||||||||| ||  || |||||||| ||| ||||||||||| ||| |||| |||| |||||||||||||||||||     
T  6372 tgttggaacattggtgcgatgttggaagaaaaaattataaaattaaacaccaagtaattatacttcgatctaatgttatgtgaattgaaaaaatagagtg 6273  T
Q  206 tgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 303  Q
    | |  ||||||||||| || ||| |||||||||||   ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       
T  6272 ttgaggtcccacataagatagaatacacacattagtggtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat--- 6178  T
Q  304 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 352  Q
       ||||||||||||||||||||||||||||||||||||||||| ||||    
T  6177 ---tattatttttattcgtgaatatcacttcccataaatttagcttatg 6132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 346
Target Start/End: Complemental strand, 5108 - 4877
Alignment:
Q  107 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 206  Q
    ||||||| ||||| |||||| ||||||||||||||| ||||||||||| ||  ||||||||||||||| |||| || | ||||||||||||||| ||| |    
T  5108 tgttggatcattggtgtgatgttggaagaaaaattgaaagattaaacaccacgtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgt 5009  T
Q  207 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 305  Q
     |||| |||||||||||  |  ||||| |||||   ||||||| ||| |||||||||||||||||||||||||||||        ||||||||||         
T  5008 ggggtaccacataaaat--ataacacatattagttgtgtttaagttgcggtatttaattttaaatacttgataatga-taaaaaataatagtaat----- 4917  T
Q  306 ctattatttttattcgtgaatatcacttcccataaatttag 346  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  4916 -tattatttttattcgtgaatatcacttcccataaatttag 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 110 - 347
Target Start/End: Complemental strand, 36257 - 36027
Alignment:
Q  110 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 209  Q
    |||||||||  |||||| ||| || | |||||| ||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||||||| ||||    
T  36257 tggaacattagtgtgatgttgaaaaataaattgaaagattaaacaccaaataattatattttgatctaatgttgtatgaattgaaaaaatagagtgtggg 36158  T
Q  210 tccc-acataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattacta 308  Q
     ||| ||||||||| |||| ||| |||||| | |||||||| || |||||||||||||||||| ||||||||||        ||||||||||      ||    
T  36157 gccccacataaaatagaactcacgcattagtagtgtttaaactgcggtatttaattttaaatatttgataatga--taaaaataatagtaat------ta 36066  T
Q  309 ttatttttattcgtgaatatcacttcccataaatttagc 347  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36065 ttatttttatttgtgaatatcacttcccataaatttagc 36027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 140 - 267
Target Start/End: Original strand, 64885 - 65013
Alignment:
Q  140 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacatta 237  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||| |||||||||||| |  |||||||||||||||| ||||||||||||||    
T  64885 ttggaagattaaaca-caagtaattaaactttgatctagtgttgtgtgaattaaaaaaatagagtgtaggggtcccacataaaatagaacacacacatta 64983  T
Q  238 gcaatgtttaaattgaggtatttaatttta 267  Q
    | | | ||||||| | ||||||||| ||||    
T  64984 gtagtctttaaatagtggtatttaaattta 65013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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