View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5427_high_20 (Length: 252)

Name: NF5427_high_20
Description: NF5427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5427_high_20
NF5427_high_20
[»] chr1 (38 HSPs)
chr1 (92-234)||(28472594-28472736)
chr1 (1-78)||(33706533-33706615)
chr1 (6-55)||(31032044-31032093)
chr1 (1-78)||(30837774-30837853)
chr1 (1-52)||(30303066-30303117)
chr1 (1-55)||(10772581-10772635)
chr1 (1-55)||(21097356-21097410)
chr1 (1-55)||(35956280-35956334)
chr1 (1-55)||(52407356-52407410)
chr1 (1-52)||(14535394-14535445)
chr1 (1-56)||(21096679-21096734)
chr1 (4-55)||(46118146-46118197)
chr1 (1-55)||(7556134-7556188)
chr1 (1-55)||(7557487-7557541)
chr1 (1-55)||(12769600-12769654)
chr1 (1-55)||(33004502-33004556)
chr1 (1-55)||(33704443-33704497)
chr1 (13-55)||(35954184-35954226)
chr1 (1-51)||(44512507-44512557)
chr1 (1-55)||(48127616-48127670)
chr1 (1-78)||(29647552-29647633)
chr1 (1-48)||(5328830-5328877)
chr1 (1-48)||(7154825-7154872)
chr1 (1-55)||(36732449-36732504)
chr1 (1-55)||(25657758-25657812)
chr1 (1-55)||(29522033-29522087)
chr1 (1-55)||(30838826-30838880)
chr1 (1-55)||(31029932-31029986)
chr1 (1-51)||(51086617-51086667)
chr1 (1-55)||(52404510-52404564)
chr1 (14-55)||(9132894-9132935)
chr1 (15-52)||(36307695-36307732)
chr1 (1-55)||(24780908-24780962)
chr1 (1-55)||(25655704-25655758)
chr1 (9-43)||(30301048-30301082)
chr1 (1-55)||(33006506-33006560)
chr1 (1-55)||(35954264-35954318)
chr1 (3-55)||(7152755-7152807)
[»] chr4 (50 HSPs)
chr4 (1-78)||(46719670-46719751)
chr4 (1-78)||(47805607-47805688)
chr4 (1-55)||(41039612-41039666)
chr4 (1-55)||(52449316-52449370)
chr4 (2-55)||(20352066-20352119)
chr4 (1-77)||(16664495-16664575)
chr4 (1-52)||(55449481-55449532)
chr4 (1-55)||(8941209-8941263)
chr4 (1-55)||(9366923-9366977)
chr4 (1-55)||(23417238-23417292)
chr4 (2-81)||(28172156-28172239)
chr4 (1-78)||(13530045-13530126)
chr4 (1-55)||(3033896-3033950)
chr4 (1-55)||(4652826-4652880)
chr4 (1-55)||(16666641-16666695)
chr4 (1-55)||(27956565-27956619)
chr4 (1-55)||(30823735-30823789)
chr4 (1-55)||(31292738-31292792)
chr4 (1-55)||(49875700-49875754)
chr4 (1-55)||(54921356-54921410)
chr4 (2-55)||(17363017-17363070)
chr4 (1-49)||(13861905-13861953)
chr4 (1-52)||(20354212-20354263)
chr4 (1-52)||(31289499-31289550)
chr4 (1-48)||(34074943-34074990)
chr4 (1-55)||(8939268-8939322)
chr4 (1-55)||(20785169-20785223)
chr4 (1-55)||(20787178-20787232)
chr4 (1-55)||(34072892-34072946)
chr4 (1-55)||(41041579-41041633)
chr4 (1-55)||(43304827-43304881)
chr4 (1-51)||(49873591-49873641)
chr4 (1-55)||(49970360-49970414)
chr4 (15-55)||(7487101-7487141)
chr4 (1-49)||(35046197-35046245)
chr4 (1-55)||(3035915-3035969)
chr4 (1-51)||(13534701-13534751)
chr4 (1-55)||(23419443-23419497)
chr4 (1-51)||(23931632-23931682)
chr4 (1-55)||(31309452-31309505)
chr4 (1-44)||(35044934-35044977)
chr4 (1-52)||(35824365-35824416)
chr4 (1-48)||(42180197-42180244)
chr4 (16-55)||(50496282-50496321)
chr4 (1-43)||(4654932-4654974)
chr4 (1-55)||(17518895-17518949)
chr4 (15-77)||(23933706-23933772)
chr4 (1-42)||(30827647-30827688)
chr4 (1-50)||(46717577-46717626)
chr4 (18-55)||(52447239-52447276)
[»] chr8 (64 HSPs)
chr8 (1-55)||(278707-278761)
chr8 (1-55)||(637091-637145)
chr8 (1-55)||(822894-822948)
chr8 (1-78)||(4621494-4621576)
chr8 (1-55)||(16097588-16097642)
chr8 (1-82)||(26965372-26965458)
chr8 (1-55)||(3703208-3703262)
chr8 (1-55)||(18957380-18957434)
chr8 (1-55)||(41182440-41182494)
chr8 (1-55)||(44258031-44258085)
chr8 (1-78)||(6096807-6096888)
chr8 (1-48)||(2081413-2081460)
chr8 (1-55)||(15881271-15881325)
chr8 (1-55)||(25583731-25583785)
chr8 (1-55)||(27911921-27911975)
chr8 (1-55)||(27958340-27958394)
chr8 (1-55)||(30476012-30476066)
chr8 (1-55)||(38059283-38059337)
chr8 (1-55)||(38576625-38576679)
chr8 (1-55)||(39859923-39859977)
chr8 (1-55)||(40302453-40302507)
chr8 (1-52)||(23345214-23345265)
chr8 (1-55)||(276617-276671)
chr8 (1-55)||(639178-639232)
chr8 (1-55)||(824984-825038)
chr8 (1-55)||(3705250-3705304)
chr8 (1-55)||(4622869-4622923)
chr8 (1-55)||(13141423-13141477)
chr8 (1-55)||(16095806-16095860)
chr8 (1-55)||(17946623-17946677)
chr8 (1-55)||(30112156-30112210)
chr8 (1-55)||(30556805-30556859)
chr8 (1-55)||(38060891-38060945)
chr8 (1-55)||(40304527-40304581)
chr8 (1-55)||(40618471-40618525)
chr8 (1-77)||(44255966-44256047)
chr8 (1-82)||(28084758-28084842)
chr8 (15-55)||(45409283-45409323)
chr8 (1-52)||(17948623-17948674)
chr8 (1-52)||(18955136-18955187)
chr8 (1-48)||(36193391-36193438)
chr8 (1-48)||(45407289-45407336)
chr8 (1-55)||(2082399-2082453)
chr8 (1-55)||(3846538-3846592)
chr8 (1-55)||(3852001-3852055)
chr8 (1-51)||(17853401-17853451)
chr8 (1-55)||(39857897-39857951)
chr8 (1-47)||(41181678-41181724)
chr8 (1-55)||(41546825-41546878)
chr8 (1-48)||(6093228-6093275)
chr8 (1-52)||(15883542-15883593)
chr8 (1-48)||(30554749-30554796)
chr8 (1-52)||(41544878-41544929)
chr8 (1-48)||(42647280-42647327)
chr8 (13-55)||(13139359-13139401)
chr8 (1-39)||(18087552-18087590)
chr8 (1-55)||(18089491-18089545)
chr8 (18-55)||(5588103-5588140)
chr8 (16-78)||(15825079-15825145)
chr8 (18-55)||(42734680-42734717)
chr8 (1-46)||(43695295-43695340)
chr8 (19-51)||(17852433-17852465)
chr8 (1-57)||(30105697-30105753)
chr8 (15-51)||(38577185-38577221)
[»] chr7 (48 HSPs)
chr7 (1-55)||(21737422-21737476)
chr7 (1-55)||(44456935-44456989)
chr7 (1-55)||(16273948-16274002)
chr7 (1-55)||(17286364-17286418)
chr7 (1-55)||(46553473-46553527)
chr7 (1-78)||(9659021-9659102)
chr7 (1-49)||(21817337-21817385)
chr7 (1-78)||(48684554-48684635)
chr7 (1-55)||(3412714-3412768)
chr7 (1-51)||(4861888-4861938)
chr7 (1-55)||(16277651-16277705)
chr7 (1-55)||(18995055-18995109)
chr7 (1-55)||(38179699-38179753)
chr7 (1-55)||(41338258-41338312)
chr7 (1-55)||(41856310-41856364)
chr7 (1-47)||(44884739-44884785)
chr7 (1-55)||(48950271-48950325)
chr7 (1-78)||(47505655-47505736)
chr7 (1-55)||(723524-723578)
chr7 (1-55)||(20119912-20119966)
chr7 (1-55)||(21815249-21815303)
chr7 (1-55)||(30760140-30760194)
chr7 (1-51)||(33246727-33246777)
chr7 (1-51)||(40013665-40013715)
chr7 (1-55)||(41287592-41287646)
chr7 (1-55)||(44459381-44459435)
chr7 (1-55)||(47909423-47909477)
chr7 (1-51)||(48605730-48605780)
chr7 (1-78)||(23592550-23592631)
chr7 (1-55)||(725611-725665)
chr7 (1-47)||(4657060-4657106)
chr7 (1-55)||(4859611-4859665)
chr7 (1-51)||(9663677-9663727)
chr7 (1-55)||(19233758-19233812)
chr7 (1-43)||(28588235-28588277)
chr7 (1-55)||(40015762-40015816)
chr7 (1-55)||(41289647-41289701)
chr7 (1-55)||(44882609-44882663)
chr7 (1-46)||(46934276-46934321)
chr7 (18-55)||(47906985-47907022)
chr7 (1-49)||(8391484-8391532)
chr7 (15-51)||(48607717-48607753)
chr7 (1-52)||(23594612-23594663)
chr7 (1-52)||(41336160-41336211)
chr7 (1-52)||(46555569-46555620)
chr7 (1-55)||(3416223-3416276)
chr7 (1-51)||(17968386-17968436)
chr7 (1-55)||(20122302-20122356)
[»] chr6 (24 HSPs)
chr6 (1-55)||(953692-953746)
chr6 (1-55)||(16922224-16922278)
chr6 (1-55)||(17557612-17557666)
chr6 (1-78)||(4587873-4587955)
chr6 (1-55)||(14105914-14105968)
chr6 (1-77)||(24083004-24083084)
chr6 (1-55)||(11837765-11837819)
chr6 (1-55)||(17550995-17551049)
chr6 (1-55)||(23580118-23580172)
chr6 (1-55)||(27784401-27784455)
chr6 (1-52)||(28580935-28580986)
chr6 (1-55)||(23582189-23582243)
chr6 (1-55)||(27782299-27782353)
chr6 (1-49)||(15287501-15287549)
chr6 (1-45)||(24084543-24084587)
chr6 (1-55)||(955763-955817)
chr6 (1-55)||(14103824-14103878)
chr6 (15-52)||(11154815-11154852)
chr6 (2-51)||(12142826-12142875)
chr6 (18-55)||(25109385-25109422)
chr6 (1-52)||(4589989-4590040)
chr6 (15-50)||(27438250-27438285)
chr6 (13-51)||(5686380-5686418)
chr6 (1-51)||(28578461-28578511)
[»] chr5 (40 HSPs)
chr5 (1-55)||(37938532-37938586)
chr5 (1-55)||(39590692-39590746)
chr5 (1-55)||(15527396-15527450)
chr5 (1-55)||(19666603-19666657)
chr5 (1-55)||(27018162-27018216)
chr5 (1-51)||(30128669-30128719)
chr5 (1-55)||(745715-745769)
chr5 (1-55)||(822858-822912)
chr5 (1-55)||(9591645-9591699)
chr5 (1-55)||(9593810-9593864)
chr5 (1-55)||(12499253-12499307)
chr5 (1-55)||(19664797-19664851)
chr5 (1-55)||(27550637-27550691)
chr5 (1-55)||(34402132-34402186)
chr5 (1-55)||(37272693-37272747)
chr5 (1-55)||(37940103-37940157)
chr5 (1-55)||(42609944-42609998)
chr5 (1-48)||(7179705-7179752)
chr5 (1-52)||(11078414-11078465)
chr5 (1-48)||(31547511-31547558)
chr5 (1-55)||(744112-744166)
chr5 (1-55)||(9987433-9987487)
chr5 (1-55)||(11986569-11986623)
chr5 (1-55)||(19505024-19505078)
chr5 (1-55)||(20544229-20544283)
chr5 (1-55)||(34663555-34663609)
chr5 (1-55)||(42612370-42612424)
chr5 (6-55)||(12501389-12501438)
chr5 (1-48)||(9985405-9985452)
chr5 (1-55)||(7181192-7181246)
chr5 (1-55)||(11076829-11076883)
chr5 (1-51)||(20546305-20546355)
chr5 (1-51)||(34401553-34401603)
chr5 (18-55)||(27020212-27020249)
chr5 (1-52)||(39588296-39588347)
chr5 (1-47)||(13305580-13305626)
chr5 (14-48)||(27552658-27552692)
chr5 (1-43)||(31552272-31552314)
chr5 (1-55)||(37270278-37270332)
chr5 (18-51)||(11984516-11984549)
[»] chr3 (74 HSPs)
chr3 (1-55)||(23021992-23022046)
chr3 (1-55)||(27330153-27330207)
chr3 (1-55)||(29894724-29894778)
chr3 (1-55)||(37218207-37218261)
chr3 (1-55)||(40908456-40908510)
chr3 (1-55)||(50546511-50546565)
chr3 (1-78)||(38698776-38698857)
chr3 (1-55)||(2219943-2219997)
chr3 (1-55)||(13243540-13243594)
chr3 (1-55)||(18412084-18412138)
chr3 (1-78)||(41695926-41696008)
chr3 (1-55)||(47910991-47911045)
chr3 (1-77)||(8849765-8849846)
chr3 (1-80)||(45172681-45172765)
chr3 (1-56)||(52745693-52745748)
chr3 (1-52)||(53583671-53583722)
chr3 (1-55)||(11121112-11121166)
chr3 (1-55)||(11123612-11123666)
chr3 (1-55)||(15084690-15084744)
chr3 (1-55)||(30043610-30043664)
chr3 (1-55)||(37785319-37785373)
chr3 (1-55)||(41103691-41103745)
chr3 (1-55)||(44841264-44841318)
chr3 (1-55)||(44843317-44843371)
chr3 (1-55)||(50535994-50536048)
chr3 (1-55)||(53845166-53845220)
chr3 (2-78)||(27128137-27128218)
chr3 (1-52)||(18763881-18763932)
chr3 (1-48)||(37178288-37178335)
chr3 (1-55)||(51720899-51720954)
chr3 (1-55)||(2217911-2217965)
chr3 (1-55)||(4230886-4230940)
chr3 (1-55)||(4233167-4233221)
chr3 (1-51)||(8852269-8852319)
chr3 (1-55)||(13213326-13213380)
chr3 (1-55)||(16463789-16463843)
chr3 (1-55)||(22604751-22604805)
chr3 (1-55)||(27239181-27239235)
chr3 (1-55)||(27320892-27320946)
chr3 (1-55)||(31311705-31311759)
chr3 (1-55)||(37787230-37787284)
chr3 (1-55)||(38235379-38235433)
chr3 (1-55)||(43338254-43338308)
chr3 (9-55)||(45051777-45051823)
chr3 (1-55)||(53776439-53776493)
chr3 (2-55)||(42825895-42825948)
chr3 (1-50)||(50548613-50548662)
chr3 (1-53)||(10825788-10825840)
chr3 (3-55)||(23019718-23019770)
chr3 (15-55)||(30440419-30440459)
chr3 (1-78)||(55219849-55219930)
chr3 (1-48)||(3890817-3890864)
chr3 (1-44)||(22428996-22429039)
chr3 (1-52)||(37523078-37523129)
chr3 (1-52)||(41698210-41698261)
chr3 (1-52)||(50610564-50610615)
chr3 (1-52)||(55413141-55413192)
chr3 (1-55)||(15082749-15082803)
chr3 (1-51)||(18410096-18410146)
chr3 (1-55)||(22606812-22606866)
chr3 (1-55)||(30438305-30438359)
chr3 (1-55)||(42827956-42828010)
chr3 (1-77)||(41101517-41101598)
chr3 (16-55)||(29864520-29864559)
chr3 (1-52)||(40423540-40423591)
chr3 (1-52)||(53778427-53778478)
chr3 (1-55)||(6177330-6177384)
chr3 (4-50)||(37220228-37220274)
chr3 (1-55)||(40906035-40906089)
chr3 (1-55)||(55411133-55411187)
chr3 (18-55)||(22731412-22731449)
chr3 (18-55)||(30363876-30363913)
chr3 (18-55)||(37182415-37182452)
chr3 (3-51)||(47913076-47913124)
[»] chr2 (33 HSPs)
chr2 (1-55)||(38280299-38280353)
chr2 (1-55)||(25225366-25225420)
chr2 (1-50)||(42078900-42078949)
chr2 (1-55)||(2290423-2290478)
chr2 (1-55)||(1053173-1053227)
chr2 (5-55)||(3753042-3753092)
chr2 (1-51)||(3849835-3849885)
chr2 (1-55)||(15400900-15400954)
chr2 (1-51)||(39965222-39965272)
chr2 (1-50)||(25761195-25761244)
chr2 (1-48)||(7575604-7575651)
chr2 (1-55)||(75612-75666)
chr2 (1-55)||(3907024-3907078)
chr2 (1-55)||(15154489-15154543)
chr2 (1-77)||(28391922-28392002)
chr2 (1-52)||(38282382-38282433)
chr2 (1-55)||(4736749-4736803)
chr2 (1-55)||(6644576-6644630)
chr2 (1-55)||(14006169-14006223)
chr2 (1-55)||(27551717-27551771)
chr2 (5-51)||(28389996-28390042)
chr2 (1-55)||(42080866-42080922)
chr2 (1-78)||(39067053-39067134)
chr2 (1-52)||(77718-77769)
chr2 (1-77)||(4738383-4738463)
chr2 (1-52)||(25223351-25223402)
chr2 (15-77)||(37726053-37726118)
chr2 (1-51)||(2292462-2292512)
chr2 (1-51)||(15152414-15152464)
chr2 (1-55)||(15398847-15398900)
chr2 (1-46)||(6647258-6647303)
chr2 (16-49)||(39775185-39775218)
chr2 (15-55)||(14454632-14454672)
[»] scaffold0779 (1 HSPs)
scaffold0779 (1-55)||(123-177)
[»] scaffold0115 (2 HSPs)
scaffold0115 (1-78)||(30663-30745)
scaffold0115 (15-55)||(20756-20796)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-55)||(56467-56521)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-52)||(6131-6182)
[»] scaffold0208 (2 HSPs)
scaffold0208 (1-48)||(3906-3953)
scaffold0208 (1-55)||(5860-5914)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-50)||(49077-49112)


Alignment Details
Target: chr1 (Bit Score: 139; Significance: 8e-73; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 28472736 - 28472594
Alignment:
Q  92 atagcatagagttagtgctaaatatttttagtttgatcagctgctatactttagcaggttgttgagcgaaacatcgacatacacgaggaacataagatca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28472736 atagcatagagttagtgctaaatatttttagtttgatcagctgctatactttagcaggttgttgagcgaaacatcgacatacacgaggaacataagatca 28472637  T
Q  192 tgccacacaatcacaaacctaggacacccccacacacaatatc 234  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  28472636 agccacacaatcacaaacctaggacacccccacacacaatatc 28472594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33706533 - 33706615
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||     || ||||||||||||||||||||||    
T  33706533 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagatagggtaat 33706615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 31032044 - 31032093
Alignment:
Q  6 atgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31032044 atgttgccaatgtatattacattttgattggttgatatcatgagagggta 31032093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30837853 - 30837774
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta--tcctctaaataagatagggtaat 78  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||   ||||||||||||| ||||||||    
T  30837853 atttaatgttgccaatgtatattacattttgattgattgatatcatgagatgataatacctctaaataagagagggtaat 30837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30303066 - 30303117
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  30303066 atttaatgttgcctatgtatattacattttgattggttgatatcatgagagg 30303117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10772635 - 10772581
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  10772635 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 10772581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21097356 - 21097410
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  21097356 atttaatgttgccaatatatattacattttgattggttgatatcatgagaaggta 21097410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35956280 - 35956334
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  35956280 atttaatgttgtcaatgtatattatattttgattggttgatatcatgagagggta 35956334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52407356 - 52407410
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  52407356 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagggggta 52407410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14535445 - 14535394
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  14535445 atttaatgttgtcaatgtatattacattttaattggttgatatcatgagagg 14535394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21096734 - 21096679
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat 56  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||    
T  21096734 atttaatgtttcctatgtatattacattttgattggttgatatcatgagagagtat 21096679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 46118197 - 46118146
Alignment:
Q  4 taatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  46118197 taatgttacctatgtatattacattttgattggttgatatcatgagagggta 46118146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7556188 - 7556134
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||||||||| |||||||||||||||||||    
T  7556188 atttaatgttacctatgtatattacattttgattgattgatatcatgagagggta 7556134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7557487 - 7557541
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||    
T  7557487 atttaatgttgtcaatatatattaaattttgattggttgatatcatgagagggta 7557541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12769600 - 12769654
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||    
T  12769600 atttaatgttgtcaatgtatattacattttgattgggtgatatcatgagaaggta 12769654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33004556 - 33004502
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||    
T  33004556 atttaatgttgtcaatgtatattacattttgattagttgatattatgagagggta 33004502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33704497 - 33704443
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||| ||||||||||||    
T  33704497 atttaatgttacctatgtatattacattttgattggttgataacatgagagggta 33704443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 35954226 - 35954184
Alignment:
Q  13 caatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  35954226 caatgtatattacattttgattggttgatatcatgagagggta 35954184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44512507 - 44512557
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  44512507 atttaatgttacctatgtatattacattttgattggttgatatcatgagag 44512557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48127670 - 48127616
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||| ||||||||    
T  48127670 atttaatgttacctatgtatattacattttgattggttgatatcataagagggta 48127616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29647633 - 29647552
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta----tcctctaaataagatagggtaat 78  Q
    |||||| |||| |||||||||||  ||||||||||||||||||||||||| ||||    |||||||||||| | ||||||||    
T  29647633 atttaacgttgtcaatgtatattatattttgattggttgatatcatgagacggtaaatgtcctctaaataacagagggtaat 29647552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5328830 - 5328877
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  5328830 atttaatgttgtcaatgtatattacattttgattgattgatatcatga 5328877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7154825 - 7154872
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  7154825 atttaatattgacaatgtatattacattttgattggttgatatcatga 7154872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36732449 - 36732504
Alignment:
Q  1 atttaatgttgccaatgtatattt-cattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||    
T  36732449 atttaatgttgtcaatgtatatttacattttaattggttgatatcatgaaagggta 36732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25657758 - 25657812
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||| | ||||||    
T  25657758 atttaatgttgtcaatgtatattacattttgattggttaatatcataaaagggta 25657812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29522033 - 29522087
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||| ||||||    
T  29522033 atttaatgttacttatgtatattacattttgattggttgatatcatgacagggta 29522087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30838826 - 30838880
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||| | |||||||||||||||||||||| ||||||||    
T  30838826 atttaatgttacctatgtatagtacattttgattggttgatatcataagagggta 30838880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31029986 - 31029932
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || | ||||||| ||||||||||| |||||||||||||||||||    
T  31029986 atttaatgttacctacgtatattacattttgattgattgatatcatgagagggta 31029932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51086667 - 51086617
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| || || |||||| |||||||||||||||||||||||||||    
T  51086667 atttaatgttacctatatatattacattttgattggttgatatcatgagag 51086617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 52404564 - 52404510
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | || ||||||  ||||||||||||||||||||||||||||||    
T  52404564 atttaatgttgtctatatatattatattttgattggttgatatcatgagagggta 52404510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 9132935 - 9132894
Alignment:
Q  14 aatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  9132935 aatgtatattacattttgattggttaatatcatgagagggta 9132894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 36307732 - 36307695
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36307732 atgtatattacattttgattggttgatatcatgagagg 36307695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24780962 - 24780908
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||| ||||| |||||||||||||| ||||    
T  24780962 atttaatgttacctatgtatattacatttcgattgattgatatcatgagacggta 24780908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25655758 - 25655704
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| || || ||||||||| ||||||||||| |||||||||||| ||||||    
T  25655758 atttaatattacctatgtatattacattttgattgattgatatcatgaaagggta 25655704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 30301082 - 30301048
Alignment:
Q  9 ttgccaatgtatatttcattttgattggttgatat 43  Q
    ||||||||||||||| |||||||||||||||||||    
T  30301082 ttgccaatgtatattacattttgattggttgatat 30301048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33006506 - 33006560
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | ||||||||| | ||||||||||| ||||||| |||||||||    
T  33006506 atttaatgttgtctatgtatattactttttgattggtagatatcacgagagggta 33006560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35954318 - 35954264
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| ||||| |||||||||||||||||| ||||||    
T  35954318 atttaatgttacctatctatattacatttcgattggttgatatcatgatagggta 35954264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7152807 - 7152755
Alignment:
Q  3 ttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| || ||||||||| |||||| ||| ||||||||||| ||||||||    
T  7152807 ttaatgttacctatgtatattacattttaattagttgatatcataagagggta 7152755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46719670 - 46719751
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaat 78  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||     ||||||||||||| ||||||||    
T  46719670 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggtaaataccctctaaataagagagggtaat 46719751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47805688 - 47805607
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaat 78  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||    ||||||||||| |||||||||||||    
T  47805688 atttaatgttgccaatatatattacattttgattggttgatatcatgagagggtaaatatcctctaaacaagatagggtaat 47805607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41039666 - 41039612
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41039666 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 41039612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52449316 - 52449370
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52449316 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 52449370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 20352119 - 20352066
Alignment:
Q  2 tttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20352119 tttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 20352066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16664575 - 16664495
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaa 77  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||    ||||||||||| |||| |||||||    
T  16664575 atttaatgttacctatgtatatttcattttgattggttgatatcatgagagggtaattatcctctaaacaagagagggtaa 16664495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 55449532 - 55449481
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55449532 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagg 55449481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8941209 - 8941263
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  8941209 atttaatgttgccaatatatattacattttgattggttgatatcatgagagggta 8941263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9366977 - 9366923
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  9366977 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagggta 9366923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23417292 - 23417238
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  23417292 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagggta 23417238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 28172239 - 28172156
Alignment:
Q  2 tttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaattta 81  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||     |||||||||||||||| ||||||||    
T  28172239 tttaatattgtcaatgtatattgcattttgattggttgatatcatgagagggtaaataccctctaaataagatagtgtaattta 28172156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13530126 - 13530045
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||     |||||||| |||||||||||||    
T  13530126 atttaatgttgtcaatgtatattacattttgattggtttatatcatgagagggtaaataccctctaaacaagatagggtaat 13530045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3033950 - 3033896
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  3033950 atttaatgttggcaatgtatattatattttgattggttgatatcatgagagggta 3033896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4652880 - 4652826
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  4652880 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 4652826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16666641 - 16666695
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  16666641 atttaatgttgctaatatatattacattttgattggttgatatcatgagagggta 16666695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27956619 - 27956565
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  27956619 atttaatgttgtcaatgtatattacattttgattgattgatatcatgagagggta 27956565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30823789 - 30823735
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  30823789 atttaatgttgtcaatgtatataacattttgattggttgatatcatgagagggta 30823735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31292738 - 31292792
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  31292738 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 31292792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49875700 - 49875754
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  49875700 atttaatgttgccaatatatattacattttgattggttgatatcatgagaaggta 49875754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 54921356 - 54921410
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  54921356 atttaatgttgtcaatgtatattacattttgattggttgatattatgagagggta 54921410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 17363017 - 17363070
Alignment:
Q  2 tttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  17363017 tttaatgttgacaatgtatattacattttgattgattgatatcatgagagggta 17363070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13861905 - 13861953
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgag 49  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  13861905 atttaatgttgtcaatgtatattacattttgattggttgatatcatgag 13861953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20354212 - 20354263
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  20354212 atttaatgttacctatgtatattacattttgattggttgatatcatgagagg 20354263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31289550 - 31289499
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  31289550 atttaatgtagccaatgtatattacattttaattggttgatatcatgagagg 31289499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34074943 - 34074990
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  34074943 atttaatgttgtcaatgtatattacattttgattggttgatatcatga 34074990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8939322 - 8939268
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||| ||||||||||||||||||||    
T  8939322 atttaatgttacctatgtatattacattttgattagttgatatcatgagagggta 8939268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20785223 - 20785169
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||    
T  20785223 atttaatgttgtcaatttatattatattttgattggttgatatcatgagagggta 20785169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20787178 - 20787232
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||    
T  20787178 atttaatgttacttatgtatattacattttgattggttgatatcatgagagggta 20787232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34072946 - 34072892
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| || || ||||||||| |||||||||||||||||||||||||||||||    
T  34072946 atttaatattacctatgtatattacattttgattggttgatatcatgagagggta 34072892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41041579 - 41041633
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||    
T  41041579 atttaatgttacatatgtatattacattttgattggttgatatcatgagagggta 41041633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43304827 - 43304881
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||| ||||||    
T  43304827 atttaatgttgtcgatgtatattacattttgattggttgatatcatgaaagggta 43304881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49873641 - 49873591
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  49873641 atttaatgttacctatgtatattacattttgattggttgatatcatgagag 49873591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49970360 - 49970414
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||||||||| |||||||||||||||||||    
T  49970360 atttaatgttacctatgtatattacattttgattgattgatatcatgagagggta 49970414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 7487141 - 7487101
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  7487141 atgtatattacattttgattggttgatatcatgagagggta 7487101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35046197 - 35046245
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgag 49  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  35046197 atttaatattgtcaatgtatattacattttgattggttgatatcatgag 35046245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3035915 - 3035969
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||| |||| |||||||||||    
T  3035915 atttaatgttacctatgtatattacattttgattggtttatattatgagagggta 3035969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13534701 - 13534751
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||    
T  13534701 atttaatgttacttatgtatattacattttgattggttgatatcatgagag 13534751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23419443 - 23419497
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||| ||||    
T  23419443 atttaatgttacatatgtatattacattttgattggttgatatcatgagatggta 23419497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23931682 - 23931632
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||||| ||||    
T  23931682 atttaatgttgtcaatgtatattacattttgatttgttgatatcataagag 23931632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31309505 - 31309452
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||| ||| |||||||||||||||||||||||||||||||    
T  31309505 atttaatgttacctatgta-attacattttgattggttgatatcatgagagggta 31309452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35044977 - 35044934
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatc 44  Q
    |||||||||| || ||||||||| ||||||||||||||||||||    
T  35044977 atttaatgttacctatgtatattacattttgattggttgatatc 35044934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35824416 - 35824365
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| |  ||||||||| |||||||||||||| |||||||||||||    
T  35824416 atttaatgttacttatgtatattacattttgattggtttatatcatgagagg 35824365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42180197 - 42180244
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| |||  |||||| ||||||||||||||||||||||||    
T  42180197 atttaatgttgtcaacatatattacattttgattggttgatatcatga 42180244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 50496282 - 50496321
Alignment:
Q  16 tgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  50496282 tgtatattacattttgattggttgatatcattagagggta 50496321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4654932 - 4654974
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatat 43  Q
    ||||||||||| |||||||||||  ||||||||||||||||||    
T  4654932 atttaatgttgtcaatgtatattatattttgattggttgatat 4654974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17518949 - 17518895
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | ||||||||| |||||||||||  || |||||||||||||||    
T  17518949 atttaatgttgtcgatgtatattacattttgattgactggtatcatgagagggta 17518895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 23933706 - 23933772
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaa 77  Q
    ||||||||| |||||| ||||||||||||||||||| ||||     |||||||| ||||||||||||    
T  23933706 atgtatattacattttaattggttgatatcatgagatggtaattaccctctaaacaagatagggtaa 23933772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30827647 - 30827688
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgata 42  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  30827647 atttaatgttacctatgtatattacattttgattggttgata 30827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46717626 - 46717577
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgaga 50  Q
    |||||||||| || |||||||||  ||||||||| |||||||||||||||    
T  46717626 atttaatgttacctatgtatattatattttgattagttgatatcatgaga 46717577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 52447276 - 52447239
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  52447276 tatattgcattttgattgattgatatcatgagagggta 52447239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 278707 - 278761
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  278707 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 278761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 637145 - 637091
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  637145 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 637091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 822948 - 822894
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  822948 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4621576 - 4621494
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||     || ||||||||||||||||||||||    
T  4621576 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagatagggtaat 4621494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16097588 - 16097642
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16097588 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 16097642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26965458 - 26965372
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaatttag 82  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||     || ||||||||||||| ||||||||||||    
T  26965458 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatttag 26965372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3703262 - 3703208
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3703262 atttaatgttgccaatgtatattacattttgattgattgatatcatgagagggta 3703208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18957380 - 18957434
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18957380 atttaatgttgccaatgtatattacattttgattgattgatatcatgagagggta 18957434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41182494 - 41182440
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41182494 atttaatgttgccaatgtatattacattttgatttgttgatatcatgagagggta 41182440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44258031 - 44258085
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  44258031 atttaatgttgccaatgtatattacattttgattggttgatattatgagagggta 44258085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6096807 - 6096888
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaat 78  Q
    |||||||||||  |||||||||| ||||||||||||||||||| |||||||||    |||||||||||||||| ||||||||    
T  6096807 atttaatgttgttaatgtatattacattttgattggttgatattatgagagggtaaatatcctctaaataagagagggtaat 6096888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2081460 - 2081413
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2081460 atttaatgttgccaatgtatattacattttgattggttgatatcatga 2081413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15881325 - 15881271
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||    
T  15881325 atttaatgttaccaatgtatattacattttgattggttgatatcataagagggta 15881271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25583731 - 25583785
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  25583731 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 25583785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27911975 - 27911921
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  27911975 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 27911921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27958394 - 27958340
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  27958394 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 27958340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30476066 - 30476012
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  30476066 atttaatgttgccaatgtatattacatcttgattggttgatatcataagagggta 30476012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38059337 - 38059283
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  38059337 atttaatgttgtcaatgtatattatattttgattggttgatatcatgagagggta 38059283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38576679 - 38576625
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  38576679 atttaatgttgtcgatgtatattacattttgattggttgatatcatgagagggta 38576625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39859923 - 39859977
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  39859923 atttaatgttatcaatgtatattacattttgattggttgatatcatgagagggta 39859977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40302507 - 40302453
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40302507 atttaacgttgtcaatgtatattacattttgattggttgatatcatgagagggta 40302453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23345265 - 23345214
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  23345265 atttaatgttgtaaatgtatattacattttgattggttgatatcatgagagg 23345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 276671 - 276617
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| |||||||||||||||||||||||||||||||    
T  276671 atttaatgttacctatatatattacattttgattggttgatatcatgagagggta 276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 639178 - 639232
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| |||||||||||||||||||||||||||||||    
T  639178 atttaatgttacctatatatattacattttgattggttgatatcatgagagggta 639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 824984 - 825038
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| |||||||||||||||||||||||||||||||    
T  824984 atttaatgttacctatatatattacattttgattggttgatatcatgagagggta 825038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3705250 - 3705304
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||| ||||||||||||||||||||||||    
T  3705250 atttaatgttacctatgtatattacattttaattggttgatatcatgagagggta 3705304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4622869 - 4622923
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||| ||||||||    
T  4622869 atttaatgttacctatgtatattacattttgattggttgatatcataagagggta 4622923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13141423 - 13141477
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || |||||||||  ||||||||||||||||||||||||||||||    
T  13141423 atttaatgttacctatgtatattatattttgattggttgatatcatgagagggta 13141477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16095860 - 16095806
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || |||||||||  ||||||||||||||||||||||||||||||    
T  16095860 atttaatgttacctatgtatattatattttgattggttgatatcatgagagggta 16095806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17946677 - 17946623
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||| |||||| |||||| ||||||||||||||||||||||||    
T  17946677 atttaatgttgacaatatatattacattttaattggttgatatcatgagagggta 17946623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30112156 - 30112210
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||    
T  30112156 atttaatgttgtcaatggatattacattttgattgattgatatcatgagagggta 30112210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30556805 - 30556859
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||||||||| |||||||||||||||||||    
T  30556805 atttaatgttacccatgtatattacattttgattgattgatatcatgagagggta 30556859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38060891 - 38060945
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||| ||||||||    
T  38060891 atttaatgttacctatgtatattacattttgattggttgatatcataagagggta 38060945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40304527 - 40304581
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||    
T  40304527 atttaatgttacatatgtatattacattttgattggttgatatcatgagagggta 40304581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40618471 - 40618525
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||| |||||    
T  40618471 atttaatgttgtcaatgtatattacatgttgattggttgatatcatgagggggta 40618525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44256047 - 44255966
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaa 77  Q
    |||||||||| || || |||||| |||||| ||||||||||||||||||||||     |||||||||||||||| |||||||    
T  44256047 atttaatgttacctatatatattacattttaattggttgatatcatgagagggtaaattatcctctaaataagagagggtaa 44255966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28084842 - 28084758
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaatttag 82  Q
    |||||||||||| |||||||||| |||||| || |||||||||||||||||||||     || ||||| |||||||||||||||||    
T  28084842 atttaatgttgcgaatgtatattacatttttat-ggttgatatcatgagagggtaaataccccctaaacaagatagggtaatttag 28084758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 45409283 - 45409323
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  45409283 atgtatattacattttgattggttgatatcatgagagggta 45409323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17948623 - 17948674
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || ||||||||| |||||| |||||||||||||||||||||    
T  17948623 atttaatgttacctatgtatattacattttaattggttgatatcatgagagg 17948674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18955187 - 18955136
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || ||||||| | ||||||||||||||||||||||||||||    
T  18955187 atttaatgttacctatgtatagtacattttgattggttgatatcatgagagg 18955136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36193391 - 36193438
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  36193391 atttaattttggcaatgtatattacattttgattggttgatatcatga 36193438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 45407336 - 45407289
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  45407336 atttaatgtcgtcaatgtatattacattttgattggttgatatcatga 45407289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2082399 - 2082453
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||| ||| ||||||||||| |||||||||||||||||||    
T  2082399 atttaatgttacctatgtacattacattttgattgattgatatcatgagagggta 2082453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3846592 - 3846538
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| |||||||||||||| ||||||||||||||||    
T  3846592 atttaatgttacctatctatattacattttgattggtttatatcatgagagggta 3846538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3852001 - 3852055
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||||||    
T  3852001 atttaatgttgtcaacgtatattacatattgattggttaatatcatgagagggta 3852055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17853401 - 17853451
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||  | ||||||||| |||||||||||||||||||||||||||    
T  17853401 atttaatgttatctatgtatattacattttgattggttgatatcatgagag 17853451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39857951 - 39857897
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  | |||||||||  ||||||||||||||||||||||||||||||    
T  39857951 atttaatgttatctatgtatattatattttgattggttgatatcatgagagggta 39857897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41181724 - 41181678
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatg 47  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  41181724 atttaatgttgtcaatgtatattacattctgattggttgatatcatg 41181678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41546825 - 41546878
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| ||||||||||| || ||||||||||||||||||| |||||||||||    
T  41546825 atttaatgctgccaatgtat-ttacattttgattggttgatatgatgagagggta 41546878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6093275 - 6093228
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    |||||||||| || ||||||||| ||||||||||| ||||||||||||    
T  6093275 atttaatgttacctatgtatattacattttgattgattgatatcatga 6093228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15883542 - 15883593
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || | ||||||| ||||||||||| ||||||||||||||||    
T  15883542 atttaatgttacctaggtatattacattttgattgattgatatcatgagagg 15883593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30554796 - 30554749
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||| ||| ||||||||||| ||||||||||| ||||||||||||    
T  30554796 atttaatattgtcaatgtatattacattttgattgattgatatcatga 30554749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41544929 - 41544878
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| |  || |||||| ||||||||||||||||||||||||||||    
T  41544929 atttaatgttacttatatatattacattttgattggttgatatcatgagagg 41544878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42647280 - 42647327
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    |||||||| || |||||||||||  |||||||||||||||||||||||    
T  42647280 atttaatgctgacaatgtatattatattttgattggttgatatcatga 42647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 13139401 - 13139359
Alignment:
Q  13 caatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | ||||||||||||||||| |||||||||||    
T  13139401 caatgtatattaccttttgattggttgatatgatgagagggta 13139359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18087590 - 18087552
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttg 39  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  18087590 atttaatgttgccaatgtatattacactttgattggttg 18087552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18089491 - 18089545
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | |||||||||  ||||| ||||||||||||||||| ||||||    
T  18089491 atttaatgttgtctatgtatattatattttaattggttgatatcatgaaagggta 18089545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 5588103 - 5588140
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  5588103 tatattacattttgattggttgatatcatgagggggta 5588140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 15825145 - 15825079
Alignment:
Q  16 tgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaat 78  Q
    |||||||| |||||||||||||||||||| ||| ||||    |||||| ||||||||| ||||||||    
T  15825145 tgtatattacattttgattggttgatatcttgaaagggtaaatatcctataaataagagagggtaat 15825079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 42734717 - 42734680
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  42734717 tatattacattttgattggtttatatcatgagagggta 42734680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43695295 - 43695340
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcat 46  Q
    |||||||||| || ||||||||| |||||||||| |||||||||||    
T  43695295 atttaatgttacctatgtatattacattttgattagttgatatcat 43695340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 17852465 - 17852433
Alignment:
Q  19 atatttcattttgattggttgatatcatgagag 51  Q
    ||||| |||||||||||||||||||||||||||    
T  17852465 atattacattttgattggttgatatcatgagag 17852433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30105753 - 30105697
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtatc 57  Q
    ||||||| ||| | |||||||||  |||||||||||| |||||||||||| ||||||    
T  30105753 atttaatattgtctatgtatattatattttgattggtagatatcatgagatggtatc 30105697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 38577185 - 38577221
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  38577185 atgtatattacattttgaatggttgatatcatgagag 38577221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21737422 - 21737476
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21737422 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 21737476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44456989 - 44456935
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44456989 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 44456935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16274002 - 16273948
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  16274002 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagggta 16273948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17286418 - 17286364
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  17286418 atttaatgttgccaatgtatattacattttgattgattgatatcatgagagggta 17286364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46553527 - 46553473
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  46553527 atttaatgttgccaatatatattacattttgattggttgatatcatgagagggta 46553473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9659102 - 9659021
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||     |||||||| |||||||||||||    
T  9659102 atttaatgttgtcaatgtatattacattttgattggtttatatcatgagagggtaaataccctctaaacaagatagggtaat 9659021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21817337 - 21817385
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgag 49  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21817337 atttaatgttgccaatgtatattacattttgattggttgatatcatgag 21817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48684554 - 48684635
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaat 78  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| | ||||    |||||||||||||||| ||||||||    
T  48684554 atttaatgttaccaatgtatattacattttgattggttgatatcataaaagggtaaatatcctctaaataagagagggtaat 48684635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3412768 - 3412714
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  3412768 atttaatgttgccaatgtatattatattttgattggttgatatcataagagggta 3412714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4861888 - 4861938
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  4861888 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagag 4861938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16277651 - 16277705
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  16277651 atttaatgttccctatgtatattacattttgattggttgatatcatgagagggta 16277705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18995055 - 18995109
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  18995055 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 18995109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38179753 - 38179699
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  38179753 atttaatgttgtcaatgtatattacgttttgattggttgatatcatgagagggta 38179699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41338258 - 41338312
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  41338258 atttaatgttgctaatgtatattacattttgattggttgatatcatgagaaggta 41338312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41856364 - 41856310
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  41856364 atttaatgttatcaatgtatattacattttgattggttgatatcatgagagggta 41856310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44884739 - 44884785
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatg 47  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44884739 atttaatgttgccaatgtatattacattttgattggttgatatcatg 44884785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48950325 - 48950271
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  48950325 atttaatgttgtcaatgtatattacattttgattggttaatatcatgagagggta 48950271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47505655 - 47505736
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||  |||    ||||||||||| |||| ||||||||    
T  47505655 atttaatgttgtcaatgtatattacattttgattggttgatatcatgaaggggtaaatatcctctaaacaagagagggtaat 47505736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 723578 - 723524
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||    
T  723578 atttaatgttgtcaatgtatattacgtttttattggttgatatcatgagagggta 723524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20119966 - 20119912
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| ||| || ||||||||| |||||||||||||||||||||||||||||||    
T  20119966 atttaaagttacctatgtatattacattttgattggttgatatcatgagagggta 20119912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21815303 - 21815249
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||| ||||||||||    
T  21815303 atttaatgttacctatgtatattacattttgattggttgatatcttgagagggta 21815249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30760140 - 30760194
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||| ||||||||||||||||||||    
T  30760140 atttaatgttacctatgtatattacattttgattagttgatatcatgagagggta 30760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33246727 - 33246777
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  33246727 atttaatgttacctatgtatattacattttgattggttgatatcatgagag 33246777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40013715 - 40013665
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  40013715 atttaatgttgtcaatatatattacattttgattggttgatatcatgagag 40013665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41287646 - 41287592
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||    
T  41287646 atttaatgttgtcaatatatattacattttgattagttgatatcatgagagggta 41287592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44459381 - 44459435
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||||||||||||||||| |||||||||||    
T  44459381 atttaatgttacctatgtatattacattttgattggttgatattatgagagggta 44459435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47909423 - 47909477
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||| ||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  47909423 attttatgttacctatgtatattacattttgattggttgatatcatgagagggta 47909477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48605780 - 48605730
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  48605780 atttaatgttatcaatgtatattacattttgattggttgatatcatgagag 48605730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23592631 - 23592550
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg----gtatcctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||| |||     || ||||||||||||| ||||||||    
T  23592631 atttaatgttgtcaatgtatattacattttgattgattgatatcatgaaaggataaataccctctaaataagagagggtaat 23592550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 725611 - 725665
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  | |||||||||  ||||||||||||||||||||||||||||||    
T  725611 atttaatgttatctatgtatattatattttgattggttgatatcatgagagggta 725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4657106 - 4657060
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatg 47  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  4657106 atttaatgttatcaatgtatattacattttgattggttgatatcatg 4657060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4859665 - 4859611
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| ||||||||||||||||||| |||||||||||    
T  4859665 atttaatgttacctatatatattacattttgattggttgatatgatgagagggta 4859611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9663677 - 9663727
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||    
T  9663677 atttaatgttacttatgtatattacattttgattggttgatatcatgagag 9663727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19233758 - 19233812
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||||||||||  |||||||||| ||||||| ||||| |||||    
T  19233758 atttaatgttgccaatgtatattatattttgattgattgatattatgagggggta 19233812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28588277 - 28588235
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatat 43  Q
    ||||||||||||||||||||||| |||||||||| ||||||||    
T  28588277 atttaatgttgccaatgtatattacattttgattagttgatat 28588235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40015762 - 40015816
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| ||||||||||| |||||||||||||||||||    
T  40015762 atttaatgttacctatatatattacattttgattgattgatatcatgagagggta 40015816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41289647 - 41289701
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||| ||||||||| |||||| |||| |||||| ||||||||||||    
T  41289647 atttaatgttgcctatgtatattacatttttattgattgataacatgagagggta 41289701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44882663 - 44882609
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| || || ||||||||| |||||||||||||||||||||| ||||||||    
T  44882663 atttaatattacctatgtatattacattttgattggttgatatcataagagggta 44882609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46934321 - 46934276
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcat 46  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||    
T  46934321 atttaatgttggcaatgtatactacattttgattggttgatatcat 46934276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 47907022 - 47906985
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| |||||||||||||||||||||||||||||||    
T  47907022 tatattacattttgattggttgatatcatgagagggta 47906985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8391532 - 8391484
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgag 49  Q
    ||||||||||| |||||||| || ||||||||||| |||||||||||||    
T  8391532 atttaatgttgtcaatgtatgttacattttgattgtttgatatcatgag 8391484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 48607717 - 48607753
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||| |||||||||||||||||||||||||||    
T  48607717 atgtatattgcattttgattggttgatatcatgagag 48607753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23594612 - 23594663
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||| || || ||||||||| |||||||||||||||||||||| |||||    
T  23594612 atttaatattacctatgtatattacattttgattggttgatatcataagagg 23594663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41336211 - 41336160
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||| || || ||||||||| ||||||||||| ||||||||||||||||    
T  41336211 atttaatattacctatgtatattacattttgattgattgatatcatgagagg 41336160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 46555569 - 46555620
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || |||||||||  |||||||||||||||||| ||||||||    
T  46555569 atttaatgttacctatgtatattatattttgattggttgatattatgagagg 46555620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3416223 - 3416276
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||| ||| ||||||||||||||||||||    
T  3416223 atttaatgttacctatgtatattacatttt-attagttgatatcatgagagggta 3416276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17968386 - 17968436
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| ||  |||||||| |||||||||||||||||||||| ||||    
T  17968386 atttaatgttacctgtgtatattacattttgattggttgatatcataagag 17968436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20122302 - 20122356
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| ||| ||||| ||||| ||||||||| ||||||||| |||||||||||    
T  20122302 atttaatattgtcaatgcatattacattttgataggttgatataatgagagggta 20122356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 953746 - 953692
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  953746 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 953692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16922224 - 16922278
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16922224 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 16922278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17557666 - 17557612
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17557666 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 17557612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4587955 - 4587873
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaat 78  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||     |||||||||||||||| ||||||||    
T  4587955 atttaatgttgccaatatatattacattttaattggttgatatcatgagagggtaaaatatcctctaaataagagagggtaat 4587873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14105914 - 14105968
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  14105914 atttaatgttgccaatgtatattacattttgattggttgatatcataagagggta 14105968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24083084 - 24083004
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaa 77  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||     ||||||||||||| |||||||    
T  24083084 atttaatgttgcctatgtatattacattatgattggttgatatcatgagagggtaattaccctctaaataagagagggtaa 24083004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11837765 - 11837819
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  11837765 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 11837819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17550995 - 17551049
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  17550995 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 17551049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23580172 - 23580118
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  23580172 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 23580118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27784401 - 27784455
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  27784401 atttaatgttgtcaatgtatattacatttttattggttgatatcatgagagggta 27784455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28580935 - 28580986
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||||    
T  28580935 atttaatgttgtcaatgtatattacattttgattggtttatatcatgagagg 28580986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23582189 - 23582243
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||    
T  23582189 atttaatgttgtcaatgtatattacattttaattggttgatgtcatgagagggta 23582243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27782353 - 27782299
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| || || ||||||||| |||||||||||||||||||||||||||||||    
T  27782353 atttaatattacctatgtatattacattttgattggttgatatcatgagagggta 27782299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15287549 - 15287501
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgag 49  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  15287549 atttaatgttatcaatgtatattacattttgattggttgatatcatgag 15287501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24084543 - 24084587
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatca 45  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  24084543 atttaatgttgtcaatgtatattacattttgattggttgatatca 24084587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 955763 - 955817
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| |||||||||||||| ||||||||||||||||    
T  955763 atttaatgttacctatatatattacattttgattggttaatatcatgagagggta 955817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14103878 - 14103824
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  | ||||||||| |||||||||||||||||||| ||||||||||    
T  14103878 atttaatgttatctatgtatattacattttgattggttgatatcgtgagagggta 14103824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 11154815 - 11154852
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  11154815 atgtatattacattttgattggttgatatcatgagagg 11154852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 12142826 - 12142875
Alignment:
Q  2 tttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  12142826 tttaatgttgcctatggatattacattttgattggttgaaatcatgagag 12142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25109422 - 25109385
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| |||||||||||||||||||||||||||||||    
T  25109422 tatattacattttgattggttgatatcatgagagggta 25109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4589989 - 4590040
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || ||||||||| ||||| ||||| ||||||||||||||||    
T  4589989 atttaatgttacctatgtatattacatttggattgattgatatcatgagagg 4590040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 27438285 - 27438250
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgaga 50  Q
    ||||||||| ||||||||||||||||||||||||||    
T  27438285 atgtatattacattttgattggttgatatcatgaga 27438250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 5686418 - 5686380
Alignment:
Q  13 caatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  5686418 caatatatattacattttgattggttgatatcatgagag 5686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28578511 - 28578461
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| |  ||||||||| ||||||||||||||||||| |||||||    
T  28578511 atttaatgttacatatgtatattacattttgattggttgatataatgagag 28578461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37938586 - 37938532
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37938586 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 37938532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39590692 - 39590746
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39590692 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 39590746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15527396 - 15527450
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  15527396 atttaatgttgccaatgtatattacattttgattggttgatatcataagagggta 15527450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19666603 - 19666657
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  19666603 atttaatgttgccaatgtatattacattttgattggtttatatcatgagagggta 19666657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27018216 - 27018162
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  27018216 atttaatgttgccaatgtatattacattttgattggttgatatcataagagggta 27018162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30128719 - 30128669
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30128719 atttaatgttgccaatgtatattacattttgattggttgatatcatgagag 30128669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 745715 - 745769
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  745715 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 822912 - 822858
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  822912 atttaatgttgtcaatgtatattacattttgattggttgatgtcatgagagggta 822858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9591699 - 9591645
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  9591699 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 9591645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9593810 - 9593864
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  9593810 atttaatgttgtcaatgtatattatattttgattggttgatatcatgagagggta 9593864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12499307 - 12499253
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  12499307 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 12499253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19664851 - 19664797
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  19664851 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 19664797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27550691 - 27550637
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  27550691 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 27550637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34402132 - 34402186
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  34402132 atttaatgttgtcaatgtatattacattttgattggttgatatcataagagggta 34402186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37272693 - 37272747
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  37272693 atttaatgttgtcaatgtatattacattttgattggctgatatcatgagagggta 37272747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37940103 - 37940157
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  37940103 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 37940157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42609998 - 42609944
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  42609998 atttaatattgtcaatgtatattacattttgattggttgatatcatgagagggta 42609944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7179752 - 7179705
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  7179752 atttaatgttgtcaatgtatattacattttgattggttgatatcatga 7179705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11078414 - 11078465
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  11078414 atttaatgttgtcaatgtatattacattttgattggttgatatcataagagg 11078465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31547558 - 31547511
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  31547558 atttaatgttgtcaatgtatattacattttgattggttgatatcatga 31547511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 744166 - 744112
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  744166 atttaacgttgtcaatgtatattacattttaattggttgatatcatgagagggta 744112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9987433 - 9987487
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||| ||||||    
T  9987433 atttaatgttacctatgtatattacattttgattggttgatatcatgatagggta 9987487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11986569 - 11986623
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||| ||||    
T  11986569 atttaatgttactaatgtatattacattttgattggttgatatcatgagatggta 11986623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19505024 - 19505078
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||    
T  19505024 atttaatgttgtcaatgtatattacattttgattaattgatatcatgagagggta 19505078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20544283 - 20544229
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  20544283 atttaatgtttccaatgtatattatattttgattggttaatatcatgagagggta 20544229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34663555 - 34663609
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||| | |||||||||||||||||||||||||||||||    
T  34663555 atttaatgttacctatgtatactacattttgattggttgatatcatgagagggta 34663609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42612370 - 42612424
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||||||||||||||||| |||||||||||    
T  42612370 atttaatgttacctatgtatattacattttgattggttgatattatgagagggta 42612424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 12501389 - 12501438
Alignment:
Q  6 atgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  12501389 atgttgtcaatgtatattacattttgattggctgatatcatgagagggta 12501438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9985452 - 9985405
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  9985452 atttaatgttgtcaatgtatattacattttgattagttgatatcatga 9985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7181192 - 7181246
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| || || |||||| || |||||||||||||||||||||||||||||||    
T  7181192 atttaatattacctatgtatgttacattttgattggttgatatcatgagagggta 7181246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11076883 - 11076829
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||| ||||| |||  ||||||||||||||||||||||||| ||||    
T  11076883 atttaatgttgcctatgtaaattatattttgattggttgatatcatgagaaggta 11076829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20546305 - 20546355
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| || ||||||||  |||||||||||||||||||||||||||    
T  20546305 atttaatgttacctatgtatataacattttgattggttgatatcatgagag 20546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34401603 - 34401553
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||    
T  34401603 atttaatgttacttatgtatattacattttgattggttgatatcatgagag 34401553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 27020212 - 27020249
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| |||||||||||||||||||||||||||||||    
T  27020212 tatattacattttgattggttgatatcatgagagggta 27020249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39588347 - 39588296
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| |  ||||||||| ||||||||||||||||||| ||||||||    
T  39588347 atttaatgttacttatgtatattacattttgattggttgatattatgagagg 39588296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13305580 - 13305626
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatg 47  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||    
T  13305580 atttaatgttacttatgtatattacattttgattggttgatatcatg 13305626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 27552658 - 27552692
Alignment:
Q  14 aatgtatatttcattttgattggttgatatcatga 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  27552658 aatgtatattacattttgattggttgatatcatga 27552692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31552272 - 31552314
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatat 43  Q
    |||||||||| || ||||||||| |||||||||||||||||||    
T  31552272 atttaatgttacctatgtatattacattttgattggttgatat 31552314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37270332 - 37270278
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||| | ||||||    
T  37270332 atttaatgttccttatgtatattacattttgattggttgatatcataatagggta 37270278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 11984549 - 11984516
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagag 51  Q
    |||||| |||||||||||||||||||||||||||    
T  11984549 tatattacattttgattggttgatatcatgagag 11984516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23021992 - 23022046
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23021992 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 23022046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27330207 - 27330153
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27330207 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 27330153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29894724 - 29894778
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29894724 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 29894778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37218261 - 37218207
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37218261 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 37218207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40908456 - 40908510
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40908456 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 40908510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 50546565 - 50546511
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50546565 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 50546511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38698776 - 38698857
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||    ||||||||||| |||| ||||||||    
T  38698776 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagggtaaatatcctctaaacaagagagggtaat 38698857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2219943 - 2219997
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  2219943 atttaatgttaccaatgtatattacattttgattggttgatatcatgagagggta 2219997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13243540 - 13243594
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  13243540 atttaatgttgccaatatatattacattttgattggttgatatcatgagagggta 13243594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18412084 - 18412138
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  18412084 atttaatgttgccaatgtatattatattttgattggttgatatcatgagagggta 18412138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41696008 - 41695926
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |     || ||||||||||||||||||||||    
T  41696008 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagagtaaaataacctctaaataagatagggtaat 41695926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 47911045 - 47910991
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  47911045 atttaatgctgccaatgtatattacattttgattggttgatatcatgagagggta 47910991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8849846 - 8849765
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaa 77  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| ||     || |||||||||||||||||||||    
T  8849846 atttaatgttgccaatctatattacattttgattggttgatatcatgagatggtaaaataccctctaaataagatagggtaa 8849765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45172681 - 45172765
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaattt 80  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |     || ||||||||||||| ||||||||||    
T  45172681 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagagagtaaaataccctctaaataagagagggtaattt 45172765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52745748 - 52745693
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat 56  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  52745748 atttaatgttgccaatgtatattacattttgattgattgatatcataagagggtat 52745693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 53583671 - 53583722
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  53583671 atttaatgttgctaatgtatattacattttgattggttgatatcatgagagg 53583722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11121166 - 11121112
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  11121166 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 11121112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11123612 - 11123666
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  11123612 atttaatgttgccaatctagattacattttgattggttgatatcatgagagggta 11123666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15084690 - 15084744
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  15084690 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 15084744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30043610 - 30043664
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  30043610 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 30043664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37785373 - 37785319
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  37785373 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 37785319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41103691 - 41103745
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  41103691 atttaatgttgccaatgtatattacattttaatttgttgatatcatgagagggta 41103745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44841318 - 44841264
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  44841318 atttaatattgtcaatgtatattacattttgattggttgatatcatgagagggta 44841264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44843317 - 44843371
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  44843317 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 44843371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 50536048 - 50535994
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  50536048 atttaatgttgtcaaggtatattacattttgattggttgatatcatgagagggta 50535994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53845220 - 53845166
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  53845220 atttaatgttacctatgtatattacattttgattggttgatatcatgagagggta 53845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 27128137 - 27128218
Alignment:
Q  2 tttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaat 78  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||| || |     || ||||||||||||||||||||||    
T  27128137 tttaatattgccaatgtatattacattttgattggttgatatcatgatagagtaaaataccctctaaataagatagggtaat 27128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18763881 - 18763932
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  18763881 atttaatgttgtcaatgtatattacatcttgattggttgatatcatgagagg 18763932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37178335 - 37178288
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  37178335 atttaatgttgtcaatgtatattacattttgattggttgatatcatga 37178288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 51720954 - 51720899
Alignment:
Q  1 atttaatgttgccaatgtatattt-cattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  51720954 atttaatgttgtcaatgtatatttacattttgattggttgatttcatgagagggta 51720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2217965 - 2217911
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  2217965 atttaatgttatctatgtatattacattttgattggttgatatcatgagagggta 2217911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4230940 - 4230886
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||    
T  4230940 atttaatgttgtcaatgtatattacatgttgattagttgatatcatgagagggta 4230886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4233167 - 4233221
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||||||||||||||||| |||||||||||    
T  4233167 atttaatgttacctatgtatattacattttgattggttgatattatgagagggta 4233221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8852269 - 8852319
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  8852269 atttaatgttacctatgtatattacattttgattggttgatatcatgagag 8852319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13213380 - 13213326
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| | || ||||||||| |||||||||||||||||||||||||||||||    
T  13213380 atttaatgctacctatgtatattacattttgattggttgatatcatgagagggta 13213326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16463843 - 16463789
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| |||||||||||||||||||| ||||||||||    
T  16463843 atttaatgttacctatgtatattacattttgattggttgatatcttgagagggta 16463789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22604805 - 22604751
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || ||||||||| ||||||||||| |||||||||||||||||||    
T  22604805 atttaatgttacctatgtatattacattttgattgattgatatcatgagagggta 22604751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27239181 - 27239235
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||    
T  27239181 atttaatgttacatatgtatattacattttgattggttgatatcatgagagggta 27239235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27320946 - 27320892
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  27320946 atttaatgttatctatgtatattacattttgattggttgatatcatgagagggta 27320892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31311759 - 31311705
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||    
T  31311759 atttaatgttgtcaatatatattacattttgattggtttatatcatgagagggta 31311705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37787230 - 37787284
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||    
T  37787230 atttaatgttgtcaatgtatattacattttgattggtttatatcataagagggta 37787284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38235433 - 38235379
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||    
T  38235433 atttaatgttacatatgtatattacattttgattggttgatatcatgagagggta 38235379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43338308 - 43338254
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||    
T  43338308 atttaatgttacttatgtatattacattttgattggttgatatcatgagagggta 43338254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 45051823 - 45051777
Alignment:
Q  9 ttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||    
T  45051823 ttgccaatctatattacattttgattggttgatatcatgagagggta 45051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53776493 - 53776439
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||    
T  53776493 atttaatgttgtcaatgtatattacattttaattggttgatatcatgagatggta 53776439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 42825948 - 42825895
Alignment:
Q  2 tttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||| || ||||||||| |||||||| ||||||||||||||||||||||    
T  42825948 tttaatgttacctatgtatattacattttgactggttgatatcatgagagggta 42825895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50548613 - 50548662
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgaga 50  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  50548613 atttaatgttacctatgtatattacattttgattggttgatatcatgaga 50548662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10825840 - 10825788
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg 53  Q
    ||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||    
T  10825840 atttaatgttgtcaatgtatattacattttcattggttaatatcatgagaggg 10825788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 23019770 - 23019718
Alignment:
Q  3 ttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| || ||||||||| ||||| |||||||||||||||||||||||||    
T  23019770 ttaatgttacctatgtatattacatttcgattggttgatatcatgagagggta 23019718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 30440419 - 30440459
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  30440419 atgtatattacattttgattggttgatatcatgagagggta 30440459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 55219849 - 55219930
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaat 78  Q
    |||||| |||| ||||||||||| | |||| ||||||||||||||||||||||||     ||||||||||||| ||||||||    
T  55219849 atttaaagttgtcaatgtatattactttttaattggttgatatcatgagagggtaaataccctctaaataagagagggtaat 55219930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3890864 - 3890817
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  3890864 atttaatgttgtcaatatatattacattttgattggttgatatcatga 3890817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22428996 - 22429039
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatc 44  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  22428996 atttaatgttgcctatgtatattacattttgattggttgatatc 22429039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37523129 - 37523078
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||| | ||||||||| |||||| |||||||||||||||||||||    
T  37523129 atttaatgttgtctatgtatattacattttaattggttgatatcatgagagg 37523078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41698210 - 41698261
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || || |||||| ||||||||||||||||||||||||||||    
T  41698210 atttaatgttacctatatatattacattttgattggttgatatcatgagagg 41698261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50610564 - 50610615
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||| |||||    
T  50610564 atttaatattgtcaatgtatattacattttgattggttgatatcattagagg 50610615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 55413141 - 55413192
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||| |||||    
T  55413141 atttattgttgtcaatgtatattacattttgattggttgatatcataagagg 55413192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15082803 - 15082749
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  ||||||||||| ||||||||||| || ||||||||||||||||    
T  15082803 atttaatgttctcaatgtatattacattttgattgatttatatcatgagagggta 15082749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18410146 - 18410096
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||| || || ||||||||| |||||||||||||||||||||||||||    
T  18410146 atttaatattacctatgtatattacattttgattggttgatatcatgagag 18410096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22606812 - 22606866
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||  |||||||||||||||||| || ||||||||    
T  22606812 atttaatgttgtcaatgtatattatattttgattggttgatataataagagggta 22606866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30438359 - 30438305
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||| || |||||||||||| |||||| ||| ||||||||||||||||||||    
T  30438359 atttaatattaccaatgtatattacattttaatttgttgatatcatgagagggta 30438305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42827956 - 42828010
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||  | |||||||| |||||||||||||||||||    
T  42827956 atttaatgttgtcaatgtatattatagtttgattgattgatatcatgagagggta 42828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41101598 - 41101517
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaa 77  Q
    |||||||||| |  ||||||||| ||||||||||| |||||||||||||| ||     |||||||||||||||| |||||||    
T  41101598 atttaatgttacatatgtatattacattttgattgattgatatcatgagaaggtaaattatcctctaaataagagagggtaa 41101517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 29864559 - 29864520
Alignment:
Q  16 tgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  29864559 tgtatattacattttgattggttgatattatgagagggta 29864520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40423591 - 40423540
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| |  ||||||||| |||||||||||||| |||||||||||||    
T  40423591 atttaatgttacttatgtatattacattttgattggtttatatcatgagagg 40423540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 53778427 - 53778478
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||| ||| | ||||||||| ||||||||||||||||||| ||||||||    
T  53778427 atttaatattgtctatgtatattacattttgattggttgatattatgagagg 53778478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6177330 - 6177384
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||| | || || |||||| |||||||||| ||||||||||||||||||||    
T  6177330 atttaatggtacctatatatattacattttgattagttgatatcatgagagggta 6177384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 37220228 - 37220274
Alignment:
Q  4 taatgttgccaatgtatatttcattttgattggttgatatcatgaga 50  Q
    ||||||| || || |||||| ||||||||||||||||||||||||||    
T  37220228 taatgttacctatatatattacattttgattggttgatatcatgaga 37220274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40906089 - 40906035
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| ||  |||||||| |||||||||||||| |||||| |||||||||    
T  40906089 atttaatgttacctttgtatattacattttgattggttaatatcacgagagggta 40906035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 55411187 - 55411133
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | ||| ||||| ||||||||||| |||||||||||||| ||||    
T  55411187 atttaatgttggctatgcatattacattttgattgattgatatcatgagacggta 55411133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 22731449 - 22731412
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  22731449 tatattacattttgattggttgatatcatgagggggta 22731412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 30363876 - 30363913
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  30363876 tatattacattttgatttgttgatatcatgagagggta 30363913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 37182415 - 37182452
Alignment:
Q  18 tatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  37182415 tatattacattttgattgattgatatcatgagagggta 37182452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 47913076 - 47913124
Alignment:
Q  3 ttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||| || |||||||||  ||||||||||||||||||| ||||||    
T  47913076 ttaatgttacctatgtatattatattttgattggttgatatcttgagag 47913124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38280353 - 38280299
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38280353 atttaatgttgccaatgtatattacattttgattggttgatatcatgagagggta 38280299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25225366 - 25225420
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  25225366 atttaatgttgccaatgtatattacattttgattggttgatatcataagagggta 25225420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42078949 - 42078900
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgaga 50  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42078949 atttaatgttgccaatgtatattacattttgattggttgatatcatgaga 42078900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2290478 - 2290423
Alignment:
Q  1 atttaatgttgccaatgtatattt-cattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  2290478 atttaatgttgtcaatgtatatttacattttgattggttgatatcatgagagggta 2290423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1053227 - 1053173
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||    
T  1053227 atttaatgttgccaatatatattacattttgatttgttgatatcatgagagggta 1053173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 3753092 - 3753042
Alignment:
Q  5 aatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3753092 aatgttgccaatgtatattacattatgattggttgatatcatgagagggta 3753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3849885 - 3849835
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  3849885 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagag 3849835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15400900 - 15400954
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  15400900 atttaatgttgtcaatgtatattacattttgattggttgatatcatgatagggta 15400954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39965272 - 39965222
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  39965272 atttaatgttgtcaatgtatattacattttgattggttgatatcatgagag 39965222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25761244 - 25761195
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgaga 50  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25761244 atttaatgttgccaatgtatattatattttgattggttgatatcatgaga 25761195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7575604 - 7575651
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  7575604 atttaatgttgtcaatgtatattacattttgattggttgatatcatga 7575651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 75666 - 75612
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||    
T  75666 atttaatgttgccaatgtatattatattttgattggttgatatcataagaaggta 75612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3907024 - 3907078
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||    
T  3907024 atttaatgttacttatgtatattacattttgattggttgatatcatgagagggta 3907078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15154489 - 15154543
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||    
T  15154489 atttaatgttgtcaatatatattacattttgattggttgatatcatgatagggta 15154543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28391922 - 28392002
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg----tatcctctaaataagatagggtaa 77  Q
    ||||| |||| || ||||||||| ||||||||||| |||||||||||||||||    ||||||||||| |||| |||||||    
T  28391922 atttattgttacctatgtatattacattttgattgattgatatcatgagagggtaattatcctctaaacaagagagggtaa 28392002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38282382 - 38282433
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||||| || ||||||||| ||||||||||| ||||||||||||||||    
T  38282382 atttaatgttacctatgtatattacattttgattgattgatatcatgagagg 38282433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4736803 - 4736749
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||  |||| |||||| |||||| ||||||||||||||||||||||||    
T  4736803 atttaatgtttgcaatatatattgcattttaattggttgatatcatgagagggta 4736749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6644630 - 6644576
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||| | ||||||||| |||||||||||||| ||||||||||| ||||    
T  6644630 atttaatgttgtctatgtatattacattttgattggttaatatcatgagaaggta 6644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14006169 - 14006223
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  || |||||| |||||||||||||||||||||||||||||||    
T  14006169 atttaatgttacatatatatattacattttgattggttgatatcatgagagggta 14006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27551717 - 27551771
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| ||||||||||||||||||||| |||||||||    
T  27551717 atttaatgttacttatgtatattacattttgattggttgatatcaggagagggta 27551771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 28390042 - 28389996
Alignment:
Q  5 aatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  28390042 aatgttgtcaatgtatattacattttgattggttaatatcatgagag 28389996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42080866 - 42080922
Alignment:
Q  1 atttaatgttgccaat--gtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||    
T  42080866 atttaatgttgcctatatgtatattacattttgattggttgatatcatgaaagggta 42080922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39067134 - 39067053
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg----gtatcctctaaataagatagggtaat 78  Q
    ||||||||||  ||||||||||| |||||| |||| ||||||||||||||||     || |||||||||||||| |||||||    
T  39067134 atttaatgttatcaatgtatattacattttaattgattgatatcatgagaggataaataccctctaaataagattgggtaat 39067053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 77718 - 77769
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||  | ||||||||| |||||||||| |||||||||||||||||    
T  77718 atttaatgttatctatgtatattacattttgattcgttgatatcatgagagg 77769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4738383 - 4738463
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggtat----cctctaaataagatagggtaa 77  Q
    ||||||||||  | ||||||||| |||||||||||||| ||||||| ||||||||     |||||||| ||||||||||||    
T  4738383 atttaatgttatctatgtatattacattttgattggttcatatcataagagggtaattaccctctaaacaagatagggtaa 4738463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25223402 - 25223351
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    |||||||| | || ||||||||| |||||||||||||| |||||||||||||    
T  25223402 atttaatgctacctatgtatattacattttgattggttaatatcatgagagg 25223351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 37726053 - 37726118
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagggt---atcctctaaataagatagggtaa 77  Q
    ||||||||| |||||||||| ||||||||||||||| |||   |||||||||| |||| |||||||    
T  37726053 atgtatattacattttgatttgttgatatcatgagaaggtaaaatcctctaaacaagagagggtaa 37726118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2292462 - 2292512
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    |||||||||| |  ||||||||| |||||||||||||| ||||||||||||    
T  2292462 atttaatgttacttatgtatattacattttgattggtttatatcatgagag 2292512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15152464 - 15152414
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagag 51  Q
    ||||||| || || ||||||||| ||||||||||||||||||| |||||||    
T  15152464 atttaatattacctatgtatattacattttgattggttgatattatgagag 15152414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15398900 - 15398847
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| || || |||||| ||||||| |||||||||||||||||||||||    
T  15398900 atttaatgttacctatatatattacattttg-ttggttgatatcatgagagggta 15398847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6647258 - 6647303
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcat 46  Q
    ||||||| ||| |||| |||||| ||||||||||||||||||||||    
T  6647258 atttaatattgtcaatatatattacattttgattggttgatatcat 6647303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 39775185 - 39775218
Alignment:
Q  16 tgtatatttcattttgattggttgatatcatgag 49  Q
    |||||||| |||||||||||||||||||||||||    
T  39775185 tgtatattacattttgattggttgatatcatgag 39775218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 14454632 - 14454672
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||| |||||||||||||||||||| ||| ||||||    
T  14454632 atgtatattacattttgattggttgatatcttgaaagggta 14454672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0779 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 123 - 177
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  123 atttaatgttgccaatatatattacattttgattggttgatatcatgagagggta 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30663 - 30745
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagaggg-----tatcctctaaataagatagggtaat 78  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||     || ||||||||||||||||||||||    
T  30663 atttaatgttgtcaatgtatattacatttttattggttgatatcatgagagggtaaaataccctctaaataagatagggtaat 30745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 20796 - 20756
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  20796 atgtatattacattttgattggttgatatcataagagggta 20756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 56467 - 56521
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  56467 atttaatgttgccaatgtatattacattttgattggttgatatcatgggagggta 56521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6131 - 6182
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagg 52  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  6131 atttaatgttgcctatgtatattaaattttgattggttgatatcatgagagg 6182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3953 - 3906
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatga 48  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  3953 atttaatgttgtcaatgtatattacattttgattgattgatatcatga 3906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5860 - 5914
Alignment:
Q  1 atttaatgttgccaatgtatatttcattttgattggttgatatcatgagagggta 55  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||| ||||||||    
T  5860 atttaatgttacatatgtatattacattttgattggttgatatcataagagggta 5914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 49077 - 49112
Alignment:
Q  15 atgtatatttcattttgattggttgatatcatgaga 50  Q
    ||||||||| ||||||||||||||||||||||||||    
T  49077 atgtatattacattttgattggttgatatcatgaga 49112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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