View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5427_low_13 (Length: 315)

Name: NF5427_low_13
Description: NF5427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5427_low_13
NF5427_low_13
[»] chr3 (82 HSPs)
chr3 (1-303)||(10795316-10795618)
chr3 (108-239)||(13628790-13628921)
chr3 (108-239)||(46421034-46421166)
chr3 (108-239)||(13730602-13730733)
chr3 (108-239)||(29366720-29366851)
chr3 (108-236)||(40272812-40272938)
chr3 (109-238)||(22609795-22609921)
chr3 (108-239)||(516437-516569)
chr3 (108-235)||(14986989-14987116)
chr3 (129-239)||(8247708-8247818)
chr3 (107-221)||(45786213-45786327)
chr3 (108-239)||(34420643-34420773)
chr3 (110-239)||(26573155-26573282)
chr3 (108-239)||(1217118-1217245)
chr3 (108-238)||(31592878-31593004)
chr3 (108-224)||(49013473-49013589)
chr3 (108-234)||(12914035-12914159)
chr3 (108-227)||(54484730-54484848)
chr3 (108-239)||(16735469-16735597)
chr3 (108-235)||(26869739-26869863)
chr3 (108-239)||(5173719-5173849)
chr3 (109-237)||(22122918-22123042)
chr3 (107-235)||(39203548-39203672)
chr3 (108-239)||(53996565-53996695)
chr3 (112-235)||(54374349-54374471)
chr3 (108-235)||(12525439-12525564)
chr3 (108-236)||(25944500-25944627)
chr3 (124-236)||(33926114-33926224)
chr3 (120-239)||(45948850-45948967)
chr3 (110-209)||(353351-353450)
chr3 (129-235)||(9607235-9607341)
chr3 (133-239)||(45139502-45139607)
chr3 (120-236)||(6411834-6411947)
chr3 (108-239)||(52926219-52926339)
chr3 (108-218)||(15797271-15797377)
chr3 (129-235)||(55401208-55401313)
chr3 (112-239)||(7943018-7943143)
chr3 (108-226)||(25517170-25517287)
chr3 (129-239)||(30928168-30928276)
chr3 (108-200)||(34771364-34771454)
chr3 (122-234)||(43114882-43114994)
chr3 (108-239)||(4495676-4495793)
chr3 (133-236)||(9276289-9276395)
chr3 (120-235)||(44403567-44403681)
chr3 (139-221)||(47624088-47624167)
chr3 (108-239)||(54032571-54032688)
chr3 (171-239)||(7696948-7697014)
chr3 (172-239)||(45620890-45620958)
chr3 (120-234)||(829454-829567)
chr3 (108-229)||(50624953-50625072)
chr3 (109-228)||(31904857-31904975)
chr3 (171-239)||(52428538-52428607)
chr3 (183-239)||(10870025-10870080)
chr3 (120-231)||(19731038-19731147)
chr3 (108-163)||(10484616-10484671)
chr3 (108-171)||(24851301-24851364)
chr3 (108-168)||(30452892-30452952)
chr3 (109-234)||(33235564-33235687)
chr3 (176-239)||(39212018-39212081)
chr3 (174-231)||(19751614-19751671)
chr3 (108-168)||(14266372-14266431)
chr3 (175-238)||(21875042-21875106)
chr3 (108-156)||(47624208-47624256)
chr3 (108-217)||(26292382-26292487)
chr3 (171-225)||(31831241-31831293)
chr3 (108-171)||(46169967-46170030)
chr3 (108-149)||(40390357-40390398)
chr3 (172-235)||(8410929-8410990)
chr3 (171-239)||(29106577-29106645)
chr3 (195-239)||(35417944-35417988)
chr3 (122-213)||(16130329-16130419)
chr3 (109-164)||(45288056-45288111)
chr3 (108-158)||(23871473-23871523)
chr3 (107-230)||(28904980-28905101)
chr3 (122-172)||(40968611-40968661)
chr3 (120-162)||(51644074-51644116)
chr3 (193-239)||(53062066-53062112)
chr3 (170-239)||(1121285-1121354)
chr3 (171-228)||(31672732-31672789)
chr3 (107-151)||(4835856-4835900)
chr3 (108-172)||(10696213-10696277)
chr3 (171-239)||(26782394-26782462)
[»] chr2 (69 HSPs)
chr2 (108-239)||(10543704-10543835)
chr2 (107-239)||(14530324-14530456)
chr2 (108-239)||(8455316-8455445)
chr2 (108-239)||(24200623-24200754)
chr2 (108-239)||(14444735-14444863)
chr2 (108-239)||(9671187-9671314)
chr2 (108-239)||(10546168-10546298)
chr2 (108-239)||(21779261-21779388)
chr2 (108-239)||(5841034-5841165)
chr2 (108-229)||(36871509-36871626)
chr2 (108-225)||(40762234-40762349)
chr2 (112-236)||(7214543-7214667)
chr2 (108-239)||(11514442-11514570)
chr2 (108-239)||(25249738-25249866)
chr2 (139-239)||(12023950-12024047)
chr2 (108-239)||(17668008-17668137)
chr2 (107-225)||(14544083-14544202)
chr2 (107-236)||(23397775-23397900)
chr2 (108-239)||(17623570-17623699)
chr2 (108-239)||(25079717-25079847)
chr2 (108-239)||(39914306-39914435)
chr2 (108-236)||(15296406-15296533)
chr2 (119-239)||(19614998-19615117)
chr2 (108-239)||(19977714-19977843)
chr2 (129-239)||(32781309-32781417)
chr2 (139-239)||(22371063-22371158)
chr2 (108-239)||(17896265-17896395)
chr2 (120-221)||(31158451-31158552)
chr2 (107-239)||(40416870-40417000)
chr2 (111-233)||(4516354-4516474)
chr2 (129-234)||(21377094-21377197)
chr2 (129-239)||(33795291-33795399)
chr2 (145-239)||(5450291-5450384)
chr2 (129-239)||(17380258-17380365)
chr2 (124-239)||(99281-99392)
chr2 (108-189)||(23488537-23488618)
chr2 (124-239)||(25641508-25641620)
chr2 (120-238)||(24860000-24860114)
chr2 (108-210)||(25632544-25632644)
chr2 (108-230)||(30826052-30826170)
chr2 (146-239)||(23145736-23145827)
chr2 (146-239)||(23557526-23557617)
chr2 (108-239)||(44643528-44643658)
chr2 (108-235)||(27573631-27573755)
chr2 (129-188)||(19185764-19185823)
chr2 (110-169)||(41409936-41409995)
chr2 (173-239)||(17705501-17705567)
chr2 (121-205)||(24890451-24890533)
chr2 (107-163)||(8575975-8576031)
chr2 (120-235)||(17471558-17471673)
chr2 (170-239)||(29419945-29420018)
chr2 (109-169)||(40579750-40579810)
chr2 (120-235)||(26684632-26684747)
chr2 (111-239)||(45235820-45235947)
chr2 (132-221)||(44449407-44449495)
chr2 (108-168)||(34080176-34080236)
chr2 (108-168)||(34766330-34766390)
chr2 (109-239)||(13245096-13245215)
chr2 (120-230)||(30864429-30864536)
chr2 (171-239)||(2003597-2003666)
chr2 (108-156)||(22371199-22371247)
chr2 (120-239)||(31821355-31821470)
chr2 (118-198)||(39499240-39499318)
chr2 (112-156)||(124918-124962)
chr2 (171-239)||(12315713-12315780)
chr2 (171-239)||(44521434-44521502)
chr2 (191-235)||(44604864-44604907)
chr2 (108-162)||(3633708-3633762)
chr2 (124-169)||(24059012-24059057)
[»] chr6 (50 HSPs)
chr6 (108-239)||(29355855-29355986)
chr6 (108-239)||(12221914-12222046)
chr6 (108-235)||(9161133-9161259)
chr6 (108-239)||(1346970-1347097)
chr6 (108-235)||(1354757-1354880)
chr6 (108-239)||(2166410-2166541)
chr6 (108-239)||(2178043-2178174)
chr6 (108-227)||(26097178-26097293)
chr6 (107-235)||(7947370-7947497)
chr6 (130-235)||(14553521-14553626)
chr6 (108-227)||(25557743-25557858)
chr6 (108-239)||(18277193-18277322)
chr6 (120-239)||(33138839-33138956)
chr6 (108-171)||(13267797-13267860)
chr6 (115-239)||(3815084-3815206)
chr6 (108-189)||(12885967-12886048)
chr6 (122-230)||(19340843-19340949)
chr6 (108-230)||(1941870-1941990)
chr6 (107-235)||(17432350-17432484)
chr6 (108-239)||(24097587-24097712)
chr6 (146-239)||(6024239-6024332)
chr6 (133-236)||(15866064-15866163)
chr6 (115-235)||(32579436-32579553)
chr6 (108-188)||(12892064-12892144)
chr6 (121-231)||(23240837-23240943)
chr6 (153-239)||(28007634-28007716)
chr6 (177-239)||(8409249-8409311)
chr6 (108-189)||(3116129-3116210)
chr6 (136-236)||(15865885-15865982)
chr6 (108-170)||(6808468-6808530)
chr6 (135-205)||(24734682-24734752)
chr6 (107-187)||(383759-383837)
chr6 (108-231)||(23930127-23930246)
chr6 (107-235)||(12889436-12889563)
chr6 (107-234)||(22967182-22967312)
chr6 (107-234)||(23821081-23821211)
chr6 (112-239)||(14975094-14975209)
chr6 (138-235)||(11849063-11849159)
chr6 (139-239)||(13905011-13905108)
chr6 (160-239)||(4136567-4136646)
chr6 (109-235)||(2755422-2755549)
chr6 (108-221)||(9671084-9671196)
chr6 (107-168)||(10734904-10734965)
chr6 (112-161)||(30786378-30786427)
chr6 (108-234)||(32068107-32068229)
chr6 (107-168)||(11395836-11395896)
chr6 (175-235)||(20400677-20400737)
chr6 (136-212)||(24751101-24751176)
chr6 (180-239)||(17448330-17448389)
chr6 (174-206)||(14341134-14341166)
[»] chr5 (62 HSPs)
chr5 (108-239)||(38879587-38879718)
chr5 (108-239)||(41014325-41014453)
chr5 (108-239)||(43334208-43334339)
chr5 (108-239)||(4619104-4619235)
chr5 (107-236)||(13801766-13801895)
chr5 (108-239)||(24448896-24449025)
chr5 (108-239)||(8169984-8170111)
chr5 (108-239)||(32703430-32703557)
chr5 (129-235)||(27328762-27328868)
chr5 (109-226)||(20135623-20135740)
chr5 (108-239)||(35710319-35710446)
chr5 (121-240)||(19142956-19143072)
chr5 (120-239)||(43574612-43574729)
chr5 (108-239)||(28516433-28516563)
chr5 (107-220)||(16880646-16880757)
chr5 (111-230)||(7368413-7368528)
chr5 (107-221)||(7097759-7097870)
chr5 (109-236)||(12006329-12006455)
chr5 (120-234)||(208939-209051)
chr5 (107-227)||(12575659-12575779)
chr5 (108-225)||(29334415-29334531)
chr5 (129-238)||(22600461-22600568)
chr5 (102-237)||(1565439-1565572)
chr5 (107-235)||(22187295-22187423)
chr5 (120-239)||(42924842-42924963)
chr5 (122-222)||(2838802-2838899)
chr5 (107-199)||(34154813-34154903)
chr5 (108-239)||(1405193-1405322)
chr5 (120-239)||(1850646-1850762)
chr5 (132-239)||(39301129-39301235)
chr5 (108-185)||(16957374-16957449)
chr5 (108-179)||(25622524-25622595)
chr5 (129-234)||(24323726-24323829)
chr5 (129-234)||(24360350-24360453)
chr5 (107-230)||(5873321-5873441)
chr5 (180-239)||(37024626-37024683)
chr5 (136-239)||(41425954-41426055)
chr5 (187-236)||(22025552-22025601)
chr5 (107-233)||(30006337-30006461)
chr5 (108-205)||(3771379-3771474)
chr5 (129-183)||(10306495-10306548)
chr5 (120-194)||(12477132-12477205)
chr5 (185-239)||(23974786-23974840)
chr5 (156-236)||(22907913-22907990)
chr5 (130-234)||(34074584-34074686)
chr5 (108-167)||(16028624-16028683)
chr5 (111-172)||(21784335-21784396)
chr5 (107-167)||(30877563-30877623)
chr5 (112-168)||(39801591-39801647)
chr5 (108-195)||(11657699-11657785)
chr5 (108-159)||(32354211-32354262)
chr5 (130-171)||(21542489-21542530)
chr5 (121-185)||(39079764-39079827)
chr5 (120-189)||(13774921-13774988)
chr5 (109-151)||(19438758-19438800)
chr5 (119-172)||(4654426-4654479)
chr5 (109-150)||(29184062-29184103)
chr5 (107-235)||(31694107-31694233)
chr5 (108-164)||(10943845-10943900)
chr5 (108-172)||(19093884-19093948)
chr5 (108-234)||(24313572-24313699)
chr5 (108-234)||(24355909-24356036)
[»] chr8 (58 HSPs)
chr8 (108-239)||(39460994-39461125)
chr8 (108-239)||(36720802-36720931)
chr8 (107-239)||(13160708-13160837)
chr8 (108-239)||(28817626-28817755)
chr8 (108-239)||(35261685-35261814)
chr8 (108-239)||(44530155-44530284)
chr8 (108-239)||(6760828-6760959)
chr8 (109-239)||(45071271-45071398)
chr8 (121-239)||(44781517-44781635)
chr8 (108-236)||(7136527-7136655)
chr8 (108-227)||(20869941-20870060)
chr8 (108-239)||(12670250-12670377)
chr8 (114-239)||(20284075-20284202)
chr8 (108-239)||(26954138-26954270)
chr8 (108-239)||(29521685-29521814)
chr8 (105-228)||(29877111-29877232)
chr8 (114-239)||(21070703-21070831)
chr8 (108-239)||(2626525-2626657)
chr8 (108-239)||(30454097-30454224)
chr8 (108-239)||(5135290-5135418)
chr8 (108-234)||(25250533-25250659)
chr8 (108-239)||(12625895-12626025)
chr8 (103-239)||(17823582-17823716)
chr8 (108-239)||(8897764-8897893)
chr8 (112-239)||(18164764-18164888)
chr8 (120-236)||(8483950-8484064)
chr8 (121-234)||(17250888-17251001)
chr8 (107-219)||(16225045-16225157)
chr8 (129-239)||(24365080-24365189)
chr8 (111-234)||(44742521-44742643)
chr8 (108-228)||(10857845-10857964)
chr8 (145-239)||(35105929-35106022)
chr8 (131-239)||(20869523-20869625)
chr8 (120-236)||(5689640-5689754)
chr8 (120-239)||(389649-389768)
chr8 (117-239)||(22598163-22598282)
chr8 (122-239)||(42083712-42083828)
chr8 (108-239)||(31457179-31457307)
chr8 (153-221)||(43942348-43942416)
chr8 (129-236)||(14017989-14018095)
chr8 (129-239)||(24245457-24245563)
chr8 (108-239)||(28407422-28407538)
chr8 (153-239)||(11748305-11748391)
chr8 (108-224)||(19729363-19729475)
chr8 (108-188)||(16013511-16013591)
chr8 (105-230)||(23000225-23000338)
chr8 (108-184)||(26102578-26102652)
chr8 (107-237)||(33866957-33867088)
chr8 (109-168)||(27507985-27508044)
chr8 (108-171)||(35107311-35107374)
chr8 (108-157)||(27468092-27468141)
chr8 (184-233)||(30962847-30962896)
chr8 (115-198)||(26457776-26457855)
chr8 (158-219)||(23286375-23286432)
chr8 (171-234)||(36918135-36918198)
chr8 (109-169)||(36486567-36486627)
chr8 (112-175)||(18595906-18595969)
chr8 (107-151)||(30962770-30962814)
[»] chr7 (77 HSPs)
chr7 (107-239)||(47716465-47716597)
chr7 (108-239)||(42805530-42805661)
chr7 (108-239)||(7879644-7879773)
chr7 (107-239)||(2541018-2541148)
chr7 (108-239)||(21172009-21172136)
chr7 (108-236)||(43557481-43557610)
chr7 (108-239)||(27629640-27629769)
chr7 (109-235)||(11617589-11617713)
chr7 (107-239)||(10693072-10693200)
chr7 (108-239)||(42391100-42391227)
chr7 (108-235)||(32758271-32758394)
chr7 (108-239)||(19426890-19427018)
chr7 (107-237)||(33871909-33872036)
chr7 (107-236)||(22698966-22699096)
chr7 (137-239)||(46354200-46354302)
chr7 (108-239)||(40463883-40464011)
chr7 (108-239)||(42798675-42798804)
chr7 (105-235)||(23419671-23419799)
chr7 (109-239)||(29907425-29907552)
chr7 (107-239)||(48735121-48735250)
chr7 (110-239)||(18512455-18512581)
chr7 (108-233)||(34626208-34626330)
chr7 (109-239)||(18747492-18747621)
chr7 (133-239)||(7644962-7645066)
chr7 (129-239)||(35203445-35203555)
chr7 (108-239)||(39123896-39124030)
chr7 (108-239)||(31591109-31591236)
chr7 (109-239)||(42476879-42477005)
chr7 (129-238)||(13805109-13805215)
chr7 (129-226)||(38604546-38604640)
chr7 (108-220)||(35787269-35787378)
chr7 (129-236)||(19266459-19266564)
chr7 (108-239)||(38262196-38262325)
chr7 (120-235)||(21566445-21566559)
chr7 (110-239)||(35334818-35334943)
chr7 (109-232)||(3469176-3469301)
chr7 (109-239)||(16341284-16341413)
chr7 (137-233)||(1408469-1408563)
chr7 (132-236)||(48123508-48123610)
chr7 (120-236)||(14732833-14732948)
chr7 (108-239)||(19265821-19265948)
chr7 (108-193)||(45018923-45019010)
chr7 (108-236)||(32233135-32233260)
chr7 (123-200)||(33500558-33500635)
chr7 (106-229)||(23231573-23231694)
chr7 (130-235)||(2662958-2663058)
chr7 (129-235)||(28362166-28362270)
chr7 (108-193)||(27889316-27889399)
chr7 (109-236)||(11741804-11741927)
chr7 (132-236)||(14099030-14099132)
chr7 (132-236)||(14409047-14409149)
chr7 (120-239)||(47077867-47077982)
chr7 (169-236)||(12473313-12473380)
chr7 (123-234)||(42101899-42102009)
chr7 (155-236)||(5180202-5180283)
chr7 (107-239)||(8148945-8149075)
chr7 (187-239)||(18327040-18327091)
chr7 (107-166)||(11888414-11888473)
chr7 (129-239)||(28078153-28078260)
chr7 (110-230)||(27697452-27697572)
chr7 (190-239)||(42495916-42495964)
chr7 (167-239)||(1423967-1424039)
chr7 (171-239)||(15108458-15108525)
chr7 (188-239)||(7794582-7794635)
chr7 (120-214)||(25434050-25434143)
chr7 (108-150)||(36602540-36602582)
chr7 (129-238)||(44123643-44123749)
chr7 (119-208)||(17048826-17048914)
chr7 (171-239)||(6736896-6736963)
chr7 (111-159)||(42495865-42495913)
chr7 (176-239)||(43852049-43852111)
chr7 (121-214)||(21139761-21139851)
chr7 (120-192)||(36267829-36267900)
chr7 (120-209)||(13792162-13792250)
chr7 (203-239)||(7193091-7193127)
chr7 (108-180)||(23987383-23987455)
chr7 (108-200)||(39093439-39093530)
[»] chr4 (92 HSPs)
chr4 (108-239)||(5648265-5648393)
chr4 (108-228)||(20639658-20639777)
chr4 (108-239)||(16408601-16408732)
chr4 (107-239)||(44363129-44363261)
chr4 (108-239)||(47443963-47444092)
chr4 (109-239)||(40915835-40915962)
chr4 (109-239)||(6430627-6430754)
chr4 (108-239)||(16911568-16911699)
chr4 (111-235)||(21646974-21647098)
chr4 (108-219)||(23501813-23501924)
chr4 (108-236)||(20224993-20225117)
chr4 (108-239)||(48598825-48598952)
chr4 (108-235)||(30639390-30639514)
chr4 (110-239)||(29207900-29208025)
chr4 (108-239)||(9832313-9832440)
chr4 (111-235)||(17043398-17043519)
chr4 (108-235)||(47528530-47528653)
chr4 (108-239)||(54175069-54175200)
chr4 (105-239)||(30690173-30690312)
chr4 (108-239)||(5306660-5306792)
chr4 (108-236)||(35567179-35567305)
chr4 (108-239)||(14983840-14983969)
chr4 (120-239)||(54730255-54730375)
chr4 (108-239)||(30352580-30352720)
chr4 (108-235)||(13256399-13256522)
chr4 (107-201)||(20225118-20225212)
chr4 (108-225)||(25629069-25629184)
chr4 (108-239)||(11054148-11054275)
chr4 (120-239)||(19027854-19027971)
chr4 (129-233)||(21489099-21489202)
chr4 (111-235)||(25343197-25343321)
chr4 (108-239)||(25463128-25463256)
chr4 (108-234)||(20908636-20908761)
chr4 (122-235)||(37494861-37494972)
chr4 (120-221)||(51865050-51865149)
chr4 (109-227)||(7909281-7909397)
chr4 (109-237)||(8473621-8473747)
chr4 (126-225)||(49796818-49796914)
chr4 (120-233)||(9987846-9987957)
chr4 (129-235)||(39029081-39029186)
chr4 (112-239)||(39077800-39077923)
chr4 (111-235)||(36589753-36589876)
chr4 (108-222)||(20405109-20405224)
chr4 (131-239)||(7385499-7385605)
chr4 (129-234)||(10660415-10660519)
chr4 (129-234)||(10874560-10874664)
chr4 (124-236)||(30581481-30581593)
chr4 (108-184)||(33836487-33836563)
chr4 (108-200)||(36816384-36816475)
chr4 (107-235)||(32478791-32478910)
chr4 (129-235)||(49938614-49938715)
chr4 (108-235)||(7038063-7038187)
chr4 (107-170)||(38755907-38755970)
chr4 (121-239)||(41018807-41018922)
chr4 (120-239)||(487138-487264)
chr4 (107-171)||(11394924-11394988)
chr4 (107-171)||(11404651-11404715)
chr4 (106-214)||(48327761-48327869)
chr4 (120-239)||(23580220-23580337)
chr4 (129-235)||(47441551-47441655)
chr4 (108-234)||(55830721-55830844)
chr4 (107-169)||(40553936-40553998)
chr4 (129-234)||(54967032-54967134)
chr4 (132-239)||(10277781-10277884)
chr4 (108-169)||(32484307-32484368)
chr4 (108-236)||(55766466-55766591)
chr4 (124-200)||(16494262-16494338)
chr4 (120-239)||(30496334-30496449)
chr4 (107-170)||(25388249-25388312)
chr4 (108-171)||(38786681-38786744)
chr4 (129-176)||(47482871-47482918)
chr4 (108-200)||(2813170-2813263)
chr4 (173-233)||(51420586-51420646)
chr4 (132-239)||(32629293-32629397)
chr4 (159-239)||(14590843-14590922)
chr4 (108-158)||(35532077-35532127)
chr4 (185-239)||(42164224-42164277)
chr4 (107-169)||(44718641-44718703)
chr4 (148-236)||(17079691-17079777)
chr4 (139-211)||(35894492-35894563)
chr4 (129-215)||(3580861-3580945)
chr4 (108-170)||(50555656-50555718)
chr4 (186-239)||(43035254-43035307)
chr4 (202-239)||(54640431-54640468)
chr4 (120-190)||(48033379-48033449)
chr4 (108-170)||(8820581-8820643)
chr4 (109-198)||(12711450-12711537)
chr4 (186-239)||(17315375-17315427)
chr4 (202-239)||(41549388-41549425)
chr4 (160-233)||(49938490-49938561)
chr4 (108-168)||(19027986-19028046)
chr4 (117-149)||(37038132-37038164)
[»] chr1 (94 HSPs)
chr1 (108-239)||(10668254-10668385)
chr1 (108-239)||(30395726-30395857)
chr1 (108-239)||(35005152-35005283)
chr1 (108-235)||(18944676-18944804)
chr1 (108-236)||(27201679-27201807)
chr1 (108-239)||(46247953-46248082)
chr1 (108-239)||(20004090-20004221)
chr1 (108-239)||(32632557-32632685)
chr1 (108-239)||(34725098-34725225)
chr1 (111-239)||(46991833-46991959)
chr1 (120-239)||(35117777-35117897)
chr1 (108-239)||(35253187-35253314)
chr1 (129-239)||(11596542-11596649)
chr1 (110-236)||(22324925-22325049)
chr1 (122-235)||(23768334-23768445)
chr1 (108-239)||(38478282-38478409)
chr1 (120-239)||(6925129-6925246)
chr1 (108-239)||(14617067-14617196)
chr1 (108-227)||(31382214-31382330)
chr1 (106-207)||(4349699-4349798)
chr1 (110-211)||(19932755-19932856)
chr1 (108-239)||(9939490-9939622)
chr1 (108-235)||(41319806-41319931)
chr1 (111-238)||(45402124-45402251)
chr1 (110-230)||(15511150-15511271)
chr1 (129-239)||(18724566-18724674)
chr1 (108-239)||(19701599-19701729)
chr1 (108-205)||(18741957-18742054)
chr1 (108-239)||(19414468-19414595)
chr1 (108-239)||(47214540-47214667)
chr1 (108-235)||(27474314-27474438)
chr1 (120-239)||(2435798-2435916)
chr1 (122-236)||(17470361-17470472)
chr1 (108-239)||(12126837-12126964)
chr1 (108-200)||(42304207-42304299)
chr1 (130-236)||(25468285-25468389)
chr1 (120-239)||(27136663-27136781)
chr1 (129-239)||(44485130-44485238)
chr1 (120-234)||(45264411-45264524)
chr1 (112-235)||(45812541-45812660)
chr1 (108-239)||(8197072-8197201)
chr1 (111-200)||(10378738-10378825)
chr1 (108-182)||(50606487-50606561)
chr1 (108-235)||(6983811-6983934)
chr1 (108-226)||(23796507-23796623)
chr1 (111-234)||(39214961-39215083)
chr1 (143-236)||(22930104-22930193)
chr1 (132-239)||(20036249-20036355)
chr1 (108-228)||(50811979-50812098)
chr1 (115-234)||(31442396-31442515)
chr1 (108-239)||(19974074-19974203)
chr1 (108-216)||(1517311-1517418)
chr1 (108-217)||(20999850-20999957)
chr1 (129-201)||(15505631-15505701)
chr1 (108-224)||(19656105-19656220)
chr1 (131-226)||(34148983-34149076)
chr1 (170-237)||(22327130-22327197)
chr1 (172-239)||(50760288-50760355)
chr1 (113-171)||(4587568-4587626)
chr1 (157-239)||(33223013-33223093)
chr1 (108-200)||(43768207-43768297)
chr1 (120-239)||(23371153-23371268)
chr1 (108-205)||(5549580-5549677)
chr1 (171-233)||(24564379-24564441)
chr1 (120-233)||(35019265-35019375)
chr1 (129-237)||(30682845-30682949)
chr1 (171-239)||(4430087-4430155)
chr1 (124-235)||(31272397-31272499)
chr1 (111-235)||(52910250-52910379)
chr1 (117-191)||(4430008-4430080)
chr1 (124-199)||(6358190-6358264)
chr1 (153-239)||(25290192-25290285)
chr1 (119-196)||(7074588-7074664)
chr1 (122-235)||(43207528-43207640)
chr1 (129-228)||(20169110-20169207)
chr1 (138-224)||(21723728-21723811)
chr1 (120-171)||(30555210-30555261)
chr1 (121-168)||(33594144-33594191)
chr1 (129-230)||(18335309-18335408)
chr1 (131-216)||(21910673-21910754)
chr1 (111-194)||(28894561-28894642)
chr1 (171-227)||(34679280-34679336)
chr1 (108-163)||(16120819-16120874)
chr1 (118-187)||(4249453-4249520)
chr1 (118-187)||(4249777-4249844)
chr1 (118-187)||(4250101-4250168)
chr1 (180-234)||(14987989-14988043)
chr1 (202-239)||(2435985-2436022)
chr1 (179-227)||(44745854-44745900)
chr1 (160-205)||(46859129-46859173)
chr1 (183-235)||(4251455-4251507)
chr1 (131-198)||(20982773-20982838)
chr1 (107-167)||(37299573-37299633)
chr1 (124-172)||(41440618-41440666)
[»] scaffold0049 (1 HSPs)
scaffold0049 (107-239)||(58983-59115)
[»] scaffold0057 (4 HSPs)
scaffold0057 (108-239)||(46837-46966)
scaffold0057 (108-220)||(24772-24882)
scaffold0057 (108-232)||(43672-43793)
scaffold0057 (111-198)||(46710-46796)
[»] scaffold0168 (1 HSPs)
scaffold0168 (108-235)||(30589-30712)
[»] scaffold0223 (1 HSPs)
scaffold0223 (105-239)||(11137-11267)
[»] scaffold0015 (1 HSPs)
scaffold0015 (108-236)||(48634-48758)
[»] scaffold0258 (1 HSPs)
scaffold0258 (108-235)||(13024-13148)
[»] scaffold0187 (2 HSPs)
scaffold0187 (110-239)||(10052-10177)
scaffold0187 (110-239)||(20380-20505)
[»] scaffold0018 (1 HSPs)
scaffold0018 (108-239)||(72867-72997)
[»] scaffold0311 (1 HSPs)
scaffold0311 (108-239)||(10816-10945)
[»] scaffold1176 (1 HSPs)
scaffold1176 (107-236)||(1586-1711)
[»] scaffold0254 (1 HSPs)
scaffold0254 (145-239)||(4163-4258)
[»] scaffold0954 (1 HSPs)
scaffold0954 (106-229)||(3560-3681)
[»] scaffold0180 (1 HSPs)
scaffold0180 (108-197)||(24133-24220)
[»] scaffold0036 (1 HSPs)
scaffold0036 (139-239)||(35048-35147)
[»] scaffold0167 (1 HSPs)
scaffold0167 (129-238)||(23606-23713)
[»] scaffold0005 (1 HSPs)
scaffold0005 (159-239)||(226456-226535)
[»] scaffold0194 (1 HSPs)
scaffold0194 (108-197)||(24696-24783)
[»] scaffold0050 (1 HSPs)
scaffold0050 (107-170)||(58629-58691)


Alignment Details
Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 10795316 - 10795618
Alignment:
Q  1 cctattctttgtagaagtgtgtatgatgttcctgccaaagccacctgttgagacaatgaaaattcatcgacaactgatcatatatgtttggatcggttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795316 cctattctttgtagaagtgtgtatgatgttcctgccaaagccacctgttgagacaatgaaaattcatcgacaactgatcatatatgtttggatcggttta 10795415  T
Q  101 tttgagtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795416 tttgagtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 10795515  T
Q  201 cttttacacaagaggctgtttccaggacttgaacccgtgggatcggtttatttgagtaccacattatattttgttatagaaattaataagcacttagatg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  10795516 cttttacacaagaggctgtttccaggacttgaacccgtgggatcggtttatttgagtatcacattatattttgttatagaaattaataagcacttatatg 10795615  T
Q  301 atg 303  Q
    |||    
T  10795616 atg 10795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 13628790 - 13628921
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||||    
T  13628790 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttac 13628889  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  13628890 acaagaggctgtttccaggacttgaacccgtg 13628921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 46421034 - 46421166
Alignment:
Q  108 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||| | |||||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  46421034 aaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 46421133  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||    
T  46421134 cacaagaggctgtttccaggacttgaacccgtg 46421166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 13730602 - 13730733
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  13730602 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttac 13730701  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  13730702 acaagaggctgtttccaggacttgaacccgtg 13730733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 29366720 - 29366851
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  ||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||     
T  29366720 aaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttat 29366819  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  29366820 acaagaggctgtttccaggacttgaacccgtg 29366851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 40272812 - 40272938
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  40272812 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttac 40272909  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    |||||||| ||||||||||||||||||||    
T  40272910 acaagaggttgtttccaggacttgaaccc 40272938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 22609921 - 22609795
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttaca 22609825  T
Q  209 caagaggctgtttccaggacttgaacccgt 238  Q
    |||||||||||||||| |||||||||||||    
T  22609824 caagaggctgtttccaagacttgaacccgt 22609795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 516569 - 516437
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt-ggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||| |||||||| ||| |||||| |||||||||||||||| |||||    
T  516569 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgtttttta 516470  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||    
T  516469 cacaagaggctgtttccaggacttgaacccgtg 516437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 14987116 - 14986989
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| |||| |||||||| ||||||||||||| ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  14987116 aaagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 14987017  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||||||||||||||||    
T  14987016 acaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 8247708 - 8247818
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  8247708 aagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggac 8247807  T
Q  229 ttgaacccgtg 239  Q
    |||||||||||    
T  8247808 ttgaacccgtg 8247818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 45786213 - 45786327
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| |||||||| ||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45786213 taaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttta 45786312  T
Q  207 cacaagaggctgttt 221  Q
    |||||||||||||||    
T  45786313 cacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 34420643 - 34420773
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| ||  ||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  34420643 aaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccatttt-ggtgtatggtacgcagccttaccctgttttttac 34420741  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  34420742 acaagaggctgtttccaggacttgaacccgtg 34420773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 110 - 239
Target Start/End: Complemental strand, 26573282 - 26573155
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    |||||| ||||||||||| |||||| |||||||||||||||| ||| |||||||||||| ||  ||||||||||||||||||||||||||| ||||||||    
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaatt--ggtgtattgtacgcagccttaccctgttttttacac 26573185  T
Q  210 aagaggctgtttccaggacttgaacccgtg 239  Q
    | ||||||||||||||||||||||||||||    
T  26573184 aggaggctgtttccaggacttgaacccgtg 26573155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 1217245 - 1217118
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||| |||  |||||||||||||||||||||||||||||  ||||||    
T  1217245 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgcca--tttggtgtattgtacgcagccttaccctg--ttttac 1217150  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  1217149 acaagaggctgtttccaggacttgaacccgtg 1217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 31593004 - 31592878
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||  ||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 31592909  T
Q  208 acaagaggctgtttccaggacttgaacccgt 238  Q
    |||||||||||||||||||||||||||||||    
T  31592908 acaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 49013473 - 49013589
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||||||| || || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  49013473 aaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 49013572  T
Q  208 acaagaggctgtttcca 224  Q
    |||||||||||||||||    
T  49013573 acaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 12914035 - 12914159
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||  |||||||||| ||||||||  |||||||||||||| |||||||||||| ||||||    
T  12914035 aaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccattt--ggtgtattgtacgccgccttaccctgttttttac 12914132  T
Q  208 acaagaggctgtttccaggacttgaac 234  Q
    |||||||||||||||||||||||||||    
T  12914133 acaagaggctgtttccaggacttgaac 12914159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 54484848 - 54484730
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| || | |||||    
T  54484848 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccttgttttttta 54484751  T
Q  207 cacaagaggctgtttccagga 227  Q
    |||||||||||||||||||||    
T  54484750 cacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 16735597 - 16735469
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  ||||||||||||| |||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||||      
T  16735597 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttct 16735501  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||| ||||||||||||||||    
T  16735500 acaagaggctgtttcgaggacttgaacccgtg 16735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 26869863 - 26869739
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||| | ||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  26869863 aaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttac 26869767  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    || |||||||||||||||||||||||||    
T  26869766 accagaggctgtttccaggacttgaacc 26869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 5173719 - 5173849
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| | ||| ||||||  ||| ||||||    
T  5173719 aaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgt-ttttac 5173817  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||||||||||||||||||    
T  5173818 acaagaggttgtttccaggacttgaacccgtg 5173849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 22122918 - 22123042
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| ||||||||  ||||| |||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  |||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttaca 22123013  T
Q  209 caagaggctgtttccaggacttgaacccg 237  Q
    |||||| ||||||||||||||||||||||    
T  22123014 caagagactgtttccaggacttgaacccg 22123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 39203672 - 39203548
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||| ||||||||||||||||  |||||||||||||||||| ||||||||||  |||||    
T  39203672 taaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctg--tttta 39203577  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
    |||||||||||||||| ||||||||||||    
T  39203576 cacaagaggctgtttcaaggacttgaacc 39203548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 53996565 - 53996695
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||| |||||||| ||||||||| |||  |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  53996565 aaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccatttt-ggtgtattgtaagcagccttaccctgttttttac 53996663  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||| ||||||||| ||||    
T  53996664 acaagaggttgtttccacgacttgaacacgtg 53996695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 54374349 - 54374471
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    |||| ||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||    
T  54374349 ggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttt-ggtggattgtacgcagccttaccctattttttacacaa 54374447  T
Q  212 gaggctgtttccaggacttgaacc 235  Q
    |||| |||||||| ||||||||||    
T  54374448 gaggttgtttccaagacttgaacc 54374471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 12525564 - 12525439
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||   | |||||||||||||||  ||||||    
T  12525564 aaagagcaacctggtgcagtgaagctcccgtatacacagggtctaggaaggtgtcccaccatttttggtgta--cttcgcagccttaccctgatttttac 12525467  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    |||||||||||||||||||||| |||||    
T  12525466 acaagaggctgtttccaggactcgaacc 12525439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 25944627 - 25944500
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| |||||||| || |||||||| |||||||||||||  |||||||||||||||||||| |||||||||||| ||||||| ||| || ||||||    
T  25944627 aaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccatttt-ggtgtattgtactcagccttgcccagttttttac 25944529  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    || |||||| |||||||||||||||||||    
T  25944528 acgagaggcggtttccaggacttgaaccc 25944500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 33926224 - 33926114
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttcc 223  Q
    |||| |||||| |||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| |||||||||||||||| |||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccacca-ttatggtgtattgtacacagccttaccctgt-ttttacacaagaggctatttcc 33926127  T
Q  224 aggacttgaaccc 236  Q
    |||||||||||||    
T  33926126 aggacttgaaccc 33926114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 45948850 - 45948967
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||| ||  ||||||||||| ||||||||||||| | |||||||||||||| |||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaatt--ggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  220 ttccaggacttgaacccgtg 239  Q
    |||||||| |||||||||||    
T  45948948 ttccaggaattgaacccgtg 45948967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 353351 - 353450
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    ||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 9607341 - 9607235
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||| || |||||  ||||||||||||| |||| |||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||    
T  9607341 aagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggac 9607242  T
Q  229 ttgaacc 235  Q
    |||||||    
T  9607241 ttgaacc 9607235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 45139502 - 45139607
Alignment:
Q  133 tcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttga 232  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||  ||||||    
T  45139502 tcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttga 45139600  T
Q  233 acccgtg 239  Q
    |||||||    
T  45139601 acccgtg 45139607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 6411834 - 6411947
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||||||||||||||| ||||  ||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatca--tttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgt 6411930  T
Q  220 ttccaggacttgaaccc 236  Q
    || || |||||||||||    
T  6411931 ttacaagacttgaaccc 6411947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 52926219 - 52926339
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||| || ||||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||         |||    
T  52926219 aaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccacca--tttggtgtattgtacgcagccttac---------tac 52926307  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  52926308 acaagaggctgtttccaggacttgaacccgtg 52926339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 15797377 - 15797271
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  ||||||| |||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  15797377 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 15797282  T
Q  208 acaagaggctg 218  Q
    |||||||||||    
T  15797281 acaagaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 55401313 - 55401208
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||| | |||||  ||||||||||||||||||| |||||||| ||||||| |||| ||||| |||||||||||||||||||| ||||||    
T  55401313 aagctcccgcatacggaaggtccgagaaggggtcccaccatttt-ggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggac 55401215  T
Q  229 ttgaacc 235  Q
    |||||||    
T  55401214 ttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 7943143 - 7943018
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    |||||||  ||||||| ||||||||||||||||| ||||  | ||||| |||||||||||  | |||||||||||||| |||||||||| ||||| ||||    
T  7943143 ggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccattt--gatgtattgtacgcagtcttaccctgttttttagacaa 7943046  T
Q  212 gaggctgtttccaggacttgaacccgtg 239  Q
    || ||||||||||||||||||| |||||    
T  7943045 gatgctgtttccaggacttgaatccgtg 7943018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 25517170 - 25517287
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| |||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| || | || | |||||    
T  25517170 aaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatttt--gtgtattgtacgcagccatatcttgttttttta 25517267  T
Q  207 cacaagaggctgtttccagg 226  Q
    ||||||||| ||||||||||    
T  25517268 cacaagaggatgtttccagg 25517287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 30928168 - 30928276
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||| |||| ||||||||| |||||||||||| ||| ||  |||||||| ||| || ||||||| ||| |||||||||||||||||||||||||||    
T  30928168 aagctcccacatatgcagggtccgggaaggggtcccgccaatt--ggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggac 30928265  T
Q  229 ttgaacccgtg 239  Q
    |||||||||||    
T  30928266 ttgaacccgtg 30928276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 34771364 - 34771454
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    |||||||| || ||||||||  |||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34771364 aaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt 34771454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 43114882 - 43114994
Alignment:
Q  122 tgcactgaagctcccgcatacgcaggg-tccaggaaggggtcccaccatttttggtgtattgtacgcagcc-ttaccctgtctttt-acacaagaggctg 218  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||| | |||| ||||||||| |||| |||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaaggg-tcccaccattt--ggtgtattgtaggtagcccttaccctgtttttttacacaagaggctg 43114978  T
Q  219 tttccaggacttgaac 234  Q
    ||||||||||||||||    
T  43114979 tttccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 4495676 - 4495793
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||||||||||||||||||||            ||||||||  ||||||||||||||||||||||||||| ||||||    
T  4495676 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc------------caccattt--ggtgtattgtacgcagccttaccctgttttttac 4495761  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| ||||| ||| |||||||||||||||||    
T  4495762 acaataggctattttcaggacttgaacccgtg 4495793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 9276395 - 9276289
Alignment:
Q  133 tcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggc------tgtttccagg 226  Q
    ||||||||||||||||||| |||| |||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||      ||||||||||    
T  9276395 tcccgcatacgcagggtccgggaaagggtcc-accattt--ggtgtattgtacgcagccttaccctgttttttacacaagaggctgaggttgtttccagg 9276299  T
Q  227 acttgaaccc 236  Q
    ||||||||||    
T  9276298 acttgaaccc 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 44403567 - 44403681
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||| | ||||||| ||||||| ||||||||||||||||||||  | ||||| | |||||||||||| |||||||||||||||||||| |    
T  44403567 ggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtg-gtattctccgcagccttaccttgtcttttacacaagaggctat 44403665  T
Q  220 ttccaggacttgaacc 235  Q
    | ||||||||| ||||    
T  44403666 tcccaggactttaacc 44403681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 47624167 - 47624088
Alignment:
Q  139 atacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47624167 atacacagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 54032571 - 54032688
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||||||||||||||||||||            |||||||   ||||||||||| ||||||||||||||| ||||||    
T  54032571 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc------------caccattc--ggtgtattgtatgcagccttaccctgttttttac 54032656  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||||||||||||||||||    
T  54032657 acaagaggttgtttccaggacttgaacccgtg 54032688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 7696948 - 7697014
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  7696948 tttggtgtattgtacgcagccttaccctgt--tttacacaagagactgtttccaggacttgaacccgtg 7697014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 45620890 - 45620958
Alignment:
Q  172 ttggtgtattgtacgcagccttaccctgtctttt-acacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  45620890 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtg 45620958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 829454 - 829567
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||||| ||||||||||||| | |||||||||||||||| ||||||||||||||||||| | ||||  |||  |||| |||||||| |||    
T  829454 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgcaactttactatgttctttagacaagaggttgt 829552  T
Q  220 ttccaggacttgaac 234  Q
    ||| || ||||||||    
T  829553 ttctagaacttgaac 829567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 50624953 - 50625072
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||| |||||||| | ||||||||| ||||||||| |||||||||  |  ||||||||||||||  ||||||||| | || |||    
T  50624953 aaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaat--ggtgtattgtacgctaccttacccttttttatac 50625050  T
Q  208 acaagaggctgtttccaggact 229  Q
    ||||||||||||||| ||||||    
T  50625051 acaagaggctgtttctaggact 50625072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 31904857 - 31904975
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaagggg-tcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||| ||||||||||| ||||||||||| ||| | | ||  |||||||| |||||||||||  |||||||||||||||| | |||||||| ||||||    
T  31904857 aagggcagcctggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccattt--ggtgtattgtacgcagtcataccctgttttttac 31904954  T
Q  208 acaagaggctgtttccaggac 228  Q
    | || ||||||||||||||||    
T  31904955 ataataggctgtttccaggac 31904975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 52428538 - 52428607
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccag-gacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||    
T  52428538 tttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtg 52428607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 10870025 - 10870080
Alignment:
Q  183 tacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10870025 tacgcagccttaccctgt-ttttacacaagaggctgtttccaggacttgaacccgtg 10870080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 19731147 - 19731038
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||||| |||||| ||| |||  |||| ||||||||||| |   ||||||||||||||| ||||||| ||| |||||||||||||||| |    
T  19731147 ggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaata--ggtgtattgtacgcaaccttaccttgttttttacacaagaggctat 19731050  T
Q  220 ttccaggacttg 231  Q
    ||||||||||||    
T  19731049 ttccaggacttg 19731038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 10484616 - 10484671
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcc 163  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  10484616 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 24851301 - 24851364
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    ||||||||||| |||||||| ||||||||||||| ||||| ||| |||||||||||||||||||    
T  24851301 aaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 30452952 - 30452892
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||    
T  30452952 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 33235687 - 33235564
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tcttttac 207  Q
    ||||||||||||||||||| ||||| ||||||||| | ||| | |  |||||||||||||  ||| ||||||||||| ||| ||||||||| | ||||||    
T  33235687 aagggcaacctggtgcactaaagcttccgcatacgtaaggt-ctgcgaggggtcccacca--tttagtgtattgtacacagtcttaccctgtttttttac 33235591  T
Q  208 acaagaggctgtttccaggacttgaac 234  Q
    |||||||||| ||| || || ||||||    
T  33235590 acaagaggctctttacacgatttgaac 33235564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 39212081 - 39212018
Alignment:
Q  176 tgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| |||||| |||  ||||||||||||| | |||||||||||||||||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtg 39212018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 19751671 - 19751614
Alignment:
Q  174 ggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 231  Q
    ||||||||||||||| ||||||| ||  |||||||||||||||| |||||||||||||    
T  19751671 ggtgtattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttg 19751614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 14266372 - 14266431
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    |||||||||||  ||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  14266372 aaagggcaacccagtgcactaaagctcccgcatacgcagggttcaggaa-gggtcccacca 14266431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 21875106 - 21875042
Alignment:
Q  175 gtgtattgtacgcagccttaccctgtctttt-acacaagaggctgtttccaggacttgaacccgt 238  Q
    |||||||||||||||||||||||| | |||| |||||||||| ||||||||| | ||||||||||    
T  21875106 gtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccgt 21875042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 47624256 - 47624208
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaa 156  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  47624256 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 26292487 - 26292382
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||| ||||| ||||||||  || ||||||||| ||||||| | ||||||| ||||| |||||  ||||||| |||||| | ||||||||||  |||||    
T  26292487 aaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcattt--ggtgtatcgtacgcggtcttaccctgt--tttac 26292392  T
Q  208 acaagaggct 217  Q
    ||||||||||    
T  26292391 acaagaggct 26292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 31831293 - 31831241
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccag 225  Q
    |||||||||||||| ||||||||||||| |  |||||||||||||||||||||||    
T  31831293 tttggtgtattgtatgcagccttaccctat--tttacacaagaggctgtttccag 31831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 46169967 - 46170030
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    |||||| || ||| ||||||||||||||| |||| ||||||||| ||||||||||| |||||||    
T  46169967 aaagggtaatctgatgcactgaagctcccacatatgcagggtccgggaaggggtcctaccattt 46170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 40390398 - 40390357
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggt 149  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  40390398 aaagggcaacccggtgcactaaagctcccgcatacgcagggt 40390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 8410929 - 8410990
Alignment:
Q  172 ttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||  ||||||||||||||| ||||||||  ||||| ||||||||||| ||||||    
T  8410929 ttggtgtattgtgagcagccttaccctgttttttacac--gaggcagtttccaggacctgaacc 8410990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 29106645 - 29106577
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||| | ||||| ||| | |||||||||||||| ||||| || |||||| |||||||    
T  29106645 tttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtg 29106577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 35417988 - 35417944
Alignment:
Q  195 ccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||| |||||||||||||||||||||||||| |||||| ||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtg 35417944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 16130419 - 16130329
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaaga 213  Q
    |||||| ||||||| |  |||||| |||| ||||  ||||||||||||||| |||||||||| |||||||||| ||||  ||||||| ||||    
T  16130419 tgcactaaagctcctgtgtacgcaaggtctaggacagggtcccaccatttt-ggtgtattgttcgcagccttatcctgctttttacagaaga 16130329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 45288056 - 45288111
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtccc 164  Q
    ||||||| ||||||||||| ||||||  ||||||||||||||| ||||| ||||||    
T  45288056 aagggcagcctggtgcactaaagctcttgcatacgcagggtccgggaagaggtccc 45288111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 23871523 - 23871473
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaagg 158  Q
    ||||||||||| |||||||| ||| ||||||||||||||| |||| |||||    
T  23871523 aaagggcaacccggtgcactaaagttcccgcatacgcaggatccatgaagg 23871473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 28905101 - 28904980
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttt 205  Q
    ||||||||| || | | |||| ||| |||||| |||||||||||| |||| |||||   |||| ||||||||| ||||| ||| |||||| || | ||||    
T  28905101 taaagggcagcccgttacactaaagttcccgcttacgcagggtccgggaaagggtc---ccatatttggtgtaatgtacacagtcttaccttgttatttt 28905005  T
Q  206 acacaagaggctgtttccaggactt 230  Q
    ||||||||| ||||| || ||||||    
T  28905004 acacaagagactgttccctggactt 28904980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 40968661 - 40968611
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 172  Q
    |||||| ||||||||||||| | |||||| ||||||||||| |||||||||    
T  40968661 tgcactaaagctcccgcatatgtagggtctaggaaggggtctcaccatttt 40968611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 51644116 - 51644074
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtc 162  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  51644116 ggtgcactaaagctctcgcatacccagggtccaggaaggggtc 51644074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 53062112 - 53062066
Alignment:
Q  193 taccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| ||| ||||| ||||||||||||||||||||||| ||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtg 53062066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 1121285 - 1121354
Alignment:
Q  170 ttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||| || ||| | | | |||||||||| | |||||||||||||| ||| ||||    
T  1121285 ttttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtg 1121354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 31672789 - 31672732
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||  ||| || ||| ||||||| || ||||||||||||||||    
T  31672789 tttggtgtattgtacgcactcttgccttgttttttacataataggctgtttccaggac 31672732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 4835900 - 4835856
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtcc 151  Q
    |||||| ||||| ||||||||||||||| || |||||||||||||    
T  4835900 taaaggacaacccggtgcactgaagctcacgtatacgcagggtcc 4835856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 10696213 - 10696277
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 172  Q
    |||||||| ||| ||||||| | ||||||| | ||||||||||  ||||||||||||||| ||||    
T  10696213 aaagggcagcctagtgcactaatgctcccgtagacgcagggtctgggaaggggtcccaccctttt 10696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 26782462 - 26782394
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| ||  |||| ||||||| | |||||||||||||  |||||| |||||||||| |||||    
T  26782462 tttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtg 26782394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 10543835 - 10543704
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 10543736  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||| ||||||||||||||||||||||    
T  10543735 acaagaggccgtttccaggacttgaacccgtg 10543704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 107 - 239
Target Start/End: Complemental strand, 14530456 - 14530324
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  14530456 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtttttta 14530357  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
     ||||||||||||||||||||||||||||||||    
T  14530356 tacaagaggctgtttccaggacttgaacccgtg 14530324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 8455316 - 8455445
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  8455316 aaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtgttttac 8455413  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  8455414 acaagaggctgtttccaggacttgaacccgtg 8455445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 24200623 - 24200754
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||| | ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  24200623 aaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttac 24200722  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  24200723 acaagaggctgtttccaggacttgaacccgtg 24200754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 14444863 - 14444735
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||| |||| |||||||||||||| ||||||    
T  14444863 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtatcgtacacagccttaccctgt-ttttac 14444767  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  14444766 acaagaggctgtttccaggacttgaacccgtg 14444735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 9671314 - 9671187
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  9671314 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 9671219  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||| |||||||||||    
T  9671218 acaagaggctgtttccaggatttgaacccgtg 9671187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 10546298 - 10546168
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| | |||||    
T  10546298 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgttttttta 10546201  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
     |||||||| |||||||||||||||||||||||    
T  10546200 tacaagaggatgtttccaggacttgaacccgtg 10546168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 21779261 - 21779388
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||  ||||||    
T  21779261 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctg--ttttac 21779356  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||| |||||||||||||||||||    
T  21779357 acaagaggctgtctccaggacttgaacccgtg 21779388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 5841165 - 5841034
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||  |||||||| ||||||||||||| || |||||| |||||||||||||||||| ||| ||||||||||||| ||||||||| | ||||||    
T  5841165 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttac 5841066  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| |||||||||| ||||||||||||||||    
T  5841065 acaaaaggctgtttctaggacttgaacccgtg 5841034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 36871626 - 36871509
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||    
T  36871626 aaagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-tttcac 36871531  T
Q  208 acaagaggctgtttccaggact 229  Q
    ||||||||||||||||||||||    
T  36871530 acaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 40762234 - 40762349
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||| |||||||||| || ||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccacca--tttggtgtattgtacgtagccttacccagttttttac 40762331  T
Q  208 acaagaggctgtttccag 225  Q
    ||||||||||||||||||    
T  40762332 acaagaggctgtttccag 40762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 7214667 - 7214543
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    |||||||||||||||| || ||| ||||||||||| ||||  |||||| || |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  7214667 ggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaa 7214568  T
Q  212 gaggctgtttccaggacttgaaccc 236  Q
    ||| ||||||||| |||||||||||    
T  7214567 gagactgtttccaagacttgaaccc 7214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 11514570 - 11514442
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||| | |||||||| ||||||||||||||||||||||  ||||||| |||||||||||  ||||||||||||||||||||||  ||| ||||||    
T  11514570 aaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccattt--ggtgtattgtacgcagccttactttgttttttac 11514474  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||| |||||||||||    
T  11514473 acaagaggctgtttccaggagttgaacccgtg 11514442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 25249738 - 25249866
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||| |||||||||||||| | ||||||| ||||||||  |||||||||||||||||||||||||||||| || |||    
T  25249738 aaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccacca--tttggtgtattgtacgcagccttaccctgt-ttgtac 25249834  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| ||||||||| ||||||||||||||    
T  25249835 acaagagactgtttccatgacttgaacccgtg 25249866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 12023950 - 12024047
Alignment:
Q  139 atacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgt 238  Q
    ||||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12023950 atacgcagggtccgggagggggtcccaccattt--ggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacttgaacccgt 12024046  T

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Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 17668137 - 17668008
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||  ||||||||||| |  |||||||| |||||||||  ||||||||||||||||||||||||||  ||||||    
T  17668137 aaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccattt--ggtgtattgtacgcagccttaccctgatttttac 17668040  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| | |||||||||||||||||||||    
T  17668039 acaagaggttctttccaggacttgaacccgtg 17668008  T

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Target: chr2; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 14544202 - 14544083
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttt-t 205  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |  ||||| |||||| |||||||||| ||| |    
T  14544202 taaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttct 14544103  T
Q  206 acacaagaggctgtttccag 225  Q
    ||||||||||||||||||||    
T  14544102 acacaagaggctgtttccag 14544083  T

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Target: chr2; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 23397900 - 23397775
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| ||||||||  |||||||||||| | |||||||  |||||||||||||||  |||||||||||||||| ||||||||||  | |||||    
T  23397900 taaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccacca--tttggtgtattgtacgtagccttaccc--tatttta 23397805  T
Q  207 cacaagaggctgtttccaggacttgaaccc 236  Q
    ||||||||||||||||||||||||||||||    
T  23397804 cacaagaggctgtttccaggacttgaaccc 23397775  T

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Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 17623699 - 17623570
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  ||||||| ||||| || |||||||||| | | ||||||||| |||||||||  ||||||||||||||||||||||||||  ||||||    
T  17623699 aaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccattt--ggtgtattgtacgcagccttaccctgatttttac 17623602  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||| ||||||||||||||||    
T  17623601 acaagaggttgtttcgaggacttgaacccgtg 17623570  T

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Target: chr2; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 25079717 - 25079847
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| |||||||| ||||||  ||||||||||||||| ||||||||||||||||  || ||||||||||||||| ||||||| || | |||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcatccttaccttgttttttta 25079814  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||| |||||| | ||||||||||||||    
T  25079815 cacaagaggttgtttctaagacttgaacccgtg 25079847  T

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Target: chr2; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 39914306 - 39914435
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||  || |||||||||||| || |||||||||| | |||||    
T  39914306 aaagggcaacccgatgcactaaagctcccgcatacgcagggt-caggaaggggtcccacca--ttcggtgtattgtacacatccttaccctgttttttta 39914402  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||| ||||||||| |||||| ||||||    
T  39914403 cacaagaggttgtttccagtacttgatcccgtg 39914435  T

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Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 15296406 - 15296533
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| ||||| ||||  ||||| || ||||||||||||||  |||||| |||||| ||||| ||| ||||||||||||||||||||||| ||||||    
T  15296406 aaagggcagcctggcgcaccaaagcttccacatacgcagggtccgagaagggatcccactatttt-ggtatattgtacgcagccttaccctgtattttac 15296504  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    |||| ||||||||||| ||||||||||||    
T  15296505 acaacaggctgtttccgggacttgaaccc 15296533  T

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Target: chr2; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 19615117 - 19614998
Alignment:
Q  119 tggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctg 218  Q
    ||||||||| ||||||| ||||||||||||| | ||||||||||| || ||| ||||| |||||||||||| |||||||||| ||||| |||||||| ||    
T  19615117 tggtgcactaaagctcctgcatacgcagggttcgggaaggggtcc-actattattggtatattgtacgcagtcttaccctgttttttatacaagaggatg 19615019  T
Q  219 tttccaggacttgaacccgtg 239  Q
    |||| ||||||||||||||||    
T  19615018 tttcaaggacttgaacccgtg 19614998  T

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Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 19977714 - 19977843
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| || |||||||||| |||||||||||||| || ||| | ||||||| |||||||||||  ||||||||||||||| ||||| ||| | ||||||    
T  19977714 aaagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccattt--ggtgtattgtacgcaaccttatcctattttttac 19977811  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    | |||||||||||||||| |||||||||||||    
T  19977812 aaaagaggctgtttccagaacttgaacccgtg 19977843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 32781309 - 32781417
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||||||||| |||||||  |||||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||| |||||||  |||    
T  32781309 aagctcccgcatacacagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagac 32781406  T
Q  229 ttgaacccgtg 239  Q
    |||||| ||||    
T  32781407 ttgaactcgtg 32781417  T

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Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 22371158 - 22371063
Alignment:
Q  139 atacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgt 238  Q
    |||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  22371158 atacacagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgt-ttttacac--gaggctgtttccaggacttgaacccgt 22371064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 17896395 - 17896265
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct-gtctttta 206  Q
    ||||||||||  | |||||| |||||||| ||||||||||||||  |||||||||||||||  |||||| |||||||||||||||||||||  | |||||    
T  17896395 aaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccacca--tttggtatattgtacgcagccttaccctattttttta 17896298  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||| |||||| |||||||||| |||||    
T  17896297 cacaagaggttgtttctaggacttgaatccgtg 17896265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 31158451 - 31158552
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| |||  |||||||||| |||||| |||||||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgt 31158550  T
Q  220 tt 221  Q
    ||    
T  31158551 tt 31158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 40416870 - 40417000
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| |||||||| |||||| |||||| ||||||||||  || |||||||| || ||  |||||||||||| ||||||| |||||| |||||    
T  40416870 taaagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaatt--ggtgtattgtacacagcctttccctgtttttta 40416967  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
     |||||||| |||||||| ||||||||||||||    
T  40416968 tacaagaggttgtttccatgacttgaacccgtg 40417000  T

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Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 233
Target Start/End: Original strand, 4516354 - 4516474
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    ||||| || ||| |||| ||||| || |||||||||||||| |||||||||||||||| ||  ||||||||||||||||| || |||||| |||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaatt--ggtgtattgtacgcagcgttgccctgttttttacaca 4516451  T
Q  211 agaggctgtttccaggacttgaa 233  Q
    |||||||||||| || |||||||    
T  4516452 agaggctgtttctagaacttgaa 4516474  T

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Target: chr2; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 21377094 - 21377197
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||| |||||||||||| | |||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||| |||||| | |||    
T  21377094 aagctcccacatacgcagggttcgggaaggggtcccaccattt--ggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgac 21377191  T
Q  229 ttgaac 234  Q
    ||||||    
T  21377192 ttgaac 21377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 33795399 - 33795291
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtatt-gtacgcagccttaccctgtcttttacacaagaggctgtttccagga 227  Q
    |||||||||||||| |||||||  |||||||||||||||||    |||||||| ||||||||||||||||||| |||||| ||||||| ||||||| |||    
T  33795399 aagctcccgcatacacagggtctgggaaggggtcccaccata---ggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccggga 33795303  T
Q  228 cttgaacccgtg 239  Q
    ||||||||||||    
T  33795302 cttgaacccgtg 33795291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 5450384 - 5450291
Alignment:
Q  145 agggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt-acacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||| |||||||||||    
T  5450384 agggtccaggaaggggtcccacccttt--ggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtg 5450291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 17380258 - 17380365
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||||||| |||||||||||||||||||| ||| ||  |||||||||||| || || ||||||||||| || ||||||||||| |||||||| |||    
T  17380258 aagctcccgcatccgcagggtccaggaaggggttccatca--tttggtgtattgcacacaaccttaccctgt-ttatacacaagaggttgtttccaagac 17380354  T
Q  229 ttgaacccgtg 239  Q
    |||||||||||    
T  17380355 ttgaacccgtg 17380365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 99281 - 99392
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttcc 223  Q
    |||| |||||||||||||| |||||||   |||||||| |||||||||  |||||||||||||||||||| || ||| |||||||  ||||||||||||     
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccattt--ggtgtattgtacgcagccttgccatgttttttaca--agaggctgtttct 99376  T
Q  224 aggacttgaacccgtg 239  Q
    ||||||||||||||||    
T  99377 aggacttgaacccgtg 99392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 23488618 - 23488537
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcag 189  Q
    |||| |||||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  23488618 aaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcacgcag 23488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 25641620 - 25641508
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttcc 223  Q
    |||| |||||| |||||||||||| | | |||||||||||||| ||||  ||||||||||||||| | ||||||||| ||| |||||| | |||||||||    
T  25641620 cactaaagctctcgcatacgcaggattcgggaaggggtcccacaattt--ggtgtattgtacgcaactttaccctgt-tttcacacaaaatgctgtttcc 25641524  T
Q  224 aggacttgaacccgtg 239  Q
    ||||||||||||||||    
T  25641523 aggacttgaacccgtg 25641508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 24860000 - 24860114
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||||||||||||||||||  |||||||| | ||||  ||||||||||||||||||||| |||| ||| |||||||| ||||| |||    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggttctacca--tttggtgtattgtacgcagcc-taccatgt-ttttacaccagaggttgt 24860095  T
Q  220 ttccaggacttgaacccgt 238  Q
    ||||||| ||| |||||||    
T  24860096 ttccagggcttaaacccgt 24860114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 25632644 - 25632544
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||| | ||| | ||||||  |||||||||||  ||||||||||||||||||||| ||||| ||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccattt--ggtgtattgtacgcagccttatcctgttttttac 25632547  T
Q  208 aca 210  Q
    |||    
T  25632546 aca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 30826170 - 30826052
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||| ||| |||||||||| ||||||||||||| | ||||||  ||||||| ||| |||||||  ||||||||||||||| ||||||||| | ||||||    
T  30826170 aaaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaagggttcc-accattt--ggtgtattgtacgcaaccttaccctat-ttttac 30826075  T
Q  208 acaagaggctgtttccaggactt 230  Q
    ||||||||||||||||| |||||    
T  30826074 acaagaggctgtttccaagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 23145736 - 23145827
Alignment:
Q  146 gggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||| |||| ||||||||||| ||  |||||||||||||||||||||| |||| ||||||||||||| |||||| || ||||||||||||||    
T  23145736 gggtccgggaaagggtcccaccaatt--ggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtg 23145827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 23557526 - 23557617
Alignment:
Q  146 gggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||| |||| ||||||||||| ||  |||||||||||||||||||||| |||| ||||||||||||| |||||| || ||||||||||||||    
T  23557526 gggtccgggaaagggtcccaccaatt--ggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtg 23557617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 44643658 - 44643528
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    |||||||| || |||||||| | ||||||||||||||||||||  ||||||||||||||||  ||||||  ||||||||||||||||| ||| | |||||    
T  44643658 aaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccacca--tttggtacattgtacgcagccttactctgttttttta 44643561  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |  |||||||| |||| || |||||||| ||||    
T  44643560 cggaagaggctctttctagaacttgaacacgtg 44643528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 27573755 - 27573631
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||   ||||  ||| |||||||||  ||||||||||||||||||||||| ||| || |||    
T  27573755 aaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccattt--ggtgtattgtacgcagccttaccatgt-ttatac 27573659  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||| || |||||||||||    
T  27573658 acaagaggctgttgcccggacttgaacc 27573631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 19185764 - 19185823
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgca 188  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  19185764 aagctcccgcatacgcagggtccaggaaggggttccaccattttttgtgcattgtacgca 19185823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 41409995 - 41409936
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 169  Q
    ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 17705567 - 17705501
Alignment:
Q  173 tggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||| ||||||||| ||||  |||||||||||||| ||||||||||||||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtg 17705501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 24890533 - 24890451
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||   ||||||||||||| ||||||||||| ||| ||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 8576031 - 8575975
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcc 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  8576031 taaagggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 17471673 - 17471558
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt-acacaagaggctg 218  Q
    |||||||| || |||||||||| ||||||||  |||||||||| || |||||| ||| |||||||||||| |||| ||||| |||| |||||||||||||    
T  17471673 ggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcatttt-ggtatattgtacgcagtcttatcctgtttttttacacaagaggctg 17471575  T
Q  219 tttccaggacttgaacc 235  Q
    ||||   ||||||||||    
T  17471574 tttctgagacttgaacc 17471558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 29419945 - 29420018
Alignment:
Q  170 ttttggtgtattgtacgcagccttac----cctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||    ||||| |||||||||||||| |||||||||||||||||| ||||    
T  29419945 ttttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtg 29420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 169  Q
    |||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 26684632 - 26684747
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct-gtcttttacacaagagg-ct 217  Q
    |||||| | ||||||||||||||||||||| | ||||| ||||||||||  ||| || ||||||||||||||||||| |  | |||||||||||||| ||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccacca--tttagtatattgtacgcagccttaccatatttttttacacaagaggtct 26684729  T
Q  218 gtttccaggacttgaacc 235  Q
    |||| |||||||| ||||    
T  26684730 gttttcaggacttaaacc 26684747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 239
Target Start/End: Original strand, 45235820 - 45235947
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct-gtcttttacac 209  Q
    ||||||| |||| |||| ||||||| ||||||| ||||||  | ||||||||||||||||||  |||||||  ||| |||||||||||  | |||||||     
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccatttt--gtgtattacacgtagccttaccctattattttacag 45235917  T
Q  210 aagaggctgtttccaggacttgaacccgtg 239  Q
    ||||| ||||||| ||||||||||| ||||    
T  45235918 aagagactgtttctaggacttgaactcgtg 45235947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 44449407 - 44449495
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    ||||| || ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||| ||| |  ||||||| |||||    
T  44449407 ctcccacaaacgcagggtccgggaaggggtcccactatttt-ggtgtattgtacgcagccttatcctgtttttcattcaagaggttgttt 44449495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 34080236 - 34080176
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    ||||||||||| |||||||| || |||||||||| ||||||||| ||||||||||||||||    
T  34080236 aaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 34766390 - 34766330
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    |||||| |||| | |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  34766390 aaagggaaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 13245096 - 13245215
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| | | |||| ||||||||| ||| ||| ||||| ||||||||||||||||  ||| ||||| ||||||||||||||||         |||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccacca--tttagtgtaatgtacgcagccttacc---------aca 13245184  T
Q  209 caagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| |||||||||||||||||| ||||    
T  13245185 caagaggttgtttccaggacttgaactcgtg 13245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 30864429 - 30864536
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    ||||||| |||||| |||||||||||||||   |||| || ||  ||||  |||||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  30864429 ggtgcaccgaagcttccgcatacgcagggtttgggaaaggatcttacca--tttggtatattgtacgcacccttaccctat-ttttacacaagaggctgt 30864525  T
Q  220 ttccaggactt 230  Q
    ||||| |||||    
T  30864526 ttccatgactt 30864536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 2003597 - 2003666
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtctttt-acacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| ||||||||||||| ||||||||||| |||| || |||| |||||||||||||||||| |||||||    
T  2003597 tttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtg 2003666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 22371247 - 22371199
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaa 156  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  22371247 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 31821355 - 31821470
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||| | |||||||||||||| |||| | | | ||||||||||| |||||  |||||||||||| || ||||||||| | |||||||||   ||||||    
T  31821355 ggtgcattaaagctcccgcatacacaggtttcggaaaggggtcccatcattt--ggtgtattgtacacaaccttaccctattttttacaca--cggctgt 31821450  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||| | ||||||||| ||||    
T  31821451 ttctacgacttgaactcgtg 31821470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 39499240 - 39499318
Alignment:
Q  118 ctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 198  Q
    |||||||||| ||||||||||||||||||| | |   ||||| ||||||||  |||| ||||||||||||||| |||||||    
T  39499240 ctggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccacca--tttgatgtattgtacgcagctttaccct 39499318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 124918 - 124962
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaa 156  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  124918 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 12315713 - 12315780
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||| ||| |||||||||| ||||| | |||| |||||||||| ||||||||| ||||    
T  12315713 tttggtgtattgtacacagtcttaccctgtttttta-ataagaagctgtttccatgacttgaactcgtg 12315780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 44521434 - 44521502
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| || ||||||||||| ||| |||||||||||||  |||||||| || |||||| ||||    
T  44521434 tttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtg 44521502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 44604907 - 44604864
Alignment:
Q  191 cttaccctgtcttttacacaagaggctgtttccaggacttgaacc 235  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  44604907 cttaccctgt-ttttacacaagaggttgtttccaggacttgaacc 44604864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 3633708 - 3633762
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtc 162  Q
    ||||||||||  |||||||| ||||||||||||| || |||||| ||||||||||    
T  3633708 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 24059012 - 24059057
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 169  Q
    |||| |||||||| |||||||||||||| | |||||||||||||||    
T  24059012 cactaaagctcccacatacgcagggtccggaaaggggtcccaccat 24059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 29355855 - 29355986
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||||    
T  29355855 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttac 29355954  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  29355955 acaagaggctgtttccaggacttgaacccgtg 29355986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 12221914 - 12222046
Alignment:
Q  108 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  12221914 aaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 12222013  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||| ||||||||||||||    
T  12222014 cacaagaggctgtttccaagacttgaacccgtg 12222046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 9161259 - 9161133
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||||||||||| ||||| |||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||    
T  9161259 aaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgt-ttttac 9161161  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||||||||||||||||    
T  9161160 acaagaggctgtttccaggacttgaacc 9161133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 1347097 - 1346970
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  1347097 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 1347002  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||| ||||||||||||||||||||||||||    
T  1347001 acaagtggctgtttccaggacttgaacccgtg 1346970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 1354757 - 1354880
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  1354757 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 1354852  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||||||||||||||||    
T  1354853 acaagaggctgtttccaggacttgaacc 1354880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 2166410 - 2166541
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||| |||   ||||||| |||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||    
T  2166410 aaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttac 2166509  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||||||||||||||||||    
T  2166510 acaagaggttgtttccaggacttgaacccgtg 2166541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 2178043 - 2178174
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||| |||   ||||||| |||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||    
T  2178043 aaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttac 2178142  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||||||||||||||||||    
T  2178143 acaagaggttgtttccaggacttgaacccgtg 2178174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 26097293 - 26097178
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||  ||  |||||||||||||||||||||||||||||  ||||||    
T  26097293 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttca--tttggtgtattgtacgcagccttaccctg--ttttac 26097198  T
Q  208 acaagaggctgtttccagga 227  Q
    ||||||||||||||||||||    
T  26097197 acaagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 7947370 - 7947497
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||| ||  ||||||| |||||||| |||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||  |||||    
T  7947370 taaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccatttt-ggtgtattgtacgcagccttaccctggttttta 7947468  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
    |||| |||| ||||||||||| |||||||    
T  7947469 cacaggaggttgtttccaggagttgaacc 7947497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 14553626 - 14553521
Alignment:
Q  130 agctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggact 229  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||||||||| ||| |||||||||||| | |||||||||||| ||| |||||||||||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  230 tgaacc 235  Q
    ||||||    
T  14553526 tgaacc 14553521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 25557858 - 25557743
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||| ||  ||  |||||||||||||||||||||||||||||  ||||||    
T  25557858 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttca--tttggtgtattgtacgcagccttaccctg--ttttac 25557763  T
Q  208 acaagaggctgtttccagga 227  Q
    ||||||||||||||||||||    
T  25557762 acaagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 18277193 - 18277322
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||| ||||| |||||| | ||||||||||||||| || ||| ||||||||||||||||||||  |||||  ||||| || ||||||||||  ||||||    
T  18277193 aaaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccattt--ggtgttctgtactcaaccttaccctgatttttac 18277290  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||| || |||||||||||    
T  18277291 acaagaggctgtttccaagatttgaacccgtg 18277322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 33138956 - 33138839
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||| | |||||| |||||||| | || ||||||||||||||  |||||||||||||| ||||||| |||| ||||| |||||||| |||    
T  33138956 ggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccattt--ggtgtattgtacgcggccttactctgttttttatacaagaggttgt 33138859  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||    
T  33138858 ttccaggacttgaacccgtg 33138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 13267860 - 13267797
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13267860 aaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 239
Target Start/End: Original strand, 3815084 - 3815206
Alignment:
Q  115 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagag 214  Q
    |||| |||||||| ||||| ||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||| | |||| | | |||||||||| ||    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccattt--ggtgtattgtacgcagtcgtaccatattttttacacaatag 3815181  T
Q  215 gctgtttccaggacttgaacccgtg 239  Q
     ||||||||||||||||||||||||    
T  3815182 tctgtttccaggacttgaacccgtg 3815206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 12886048 - 12885967
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcag 189  Q
    ||||||||||| |||||||| |||||||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  12886048 aaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 19340949 - 19340843
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||||| ||||| |||||||||| |||||||||||||||||||| || ||||||||||||||  ||| ||||||||||| ||||||||||||||||| ||    
T  19340949 tgcactaaagcttccgcatacgccgggtccaggaaggggtcccatca-ttttggtgtattgt-tgcaaccttaccctgttttttacacaagaggctggtt 19340852  T
Q  222 ccaggactt 230  Q
    | |||||||    
T  19340851 ctaggactt 19340843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 1941990 - 1941870
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||  |||||||  || ||||||||||| || | ||||||| ||||||||||||||   ||||||||||||||||||||||||||| ||||||    
T  1941990 aaagggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattc--ggtgtattgtacgcagccttaccctgttttttac 1941893  T
Q  208 acaagaggctgtttccaggactt 230  Q
    |||||||| ||||| || |||||    
T  1941892 acaagaggttgtttacatgactt 1941870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 17432484 - 17432350
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcctta------ccctgt 200  Q
    |||||||||||| |||||||| |||||||||||| | |||| ||| ||||  |||| |||||||||| ||||||||||| ||||||||      ||||||    
T  17432484 taaagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgt 17432385  T
Q  201 cttttacacaagaggctgtttccaggacttgaacc 235  Q
     |||||||||||| | |||||||||||||||||||    
T  17432384 tttttacacaagatgttgtttccaggacttgaacc 17432350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 24097712 - 24097587
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||  |||||    ||||| ||||||||||||||| |||||     
T  24097712 aaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccacca--tttgg----ttgtaagcagccttaccctgttttttat 24097619  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| ||| ||||||| ||| ||||    
T  24097618 acaagaggctggttcgaggacttaaactcgtg 24097587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 6024332 - 6024239
Alignment:
Q  146 gggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||| ||||| ||||||| |||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||| ||||| |||||    
T  6024332 gggtccgggaagaggtcccatcattattggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtg 6024239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 15866064 - 15866163
Alignment:
Q  133 tcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttga 232  Q
    ||||||| ||||||||||| |||||||||||||||||||  ||||||||  ||||||| ||||||||| ||||||  |||||||||||||||||| ||||    
T  15866064 tcccgcaaacgcagggtccgggaaggggtcccaccattt--ggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttccaggaattga 15866159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 32579553 - 32579436
Alignment:
Q  115 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagag 214  Q
    ||||||| | ||| ||||||||||||| ||||||||  ||||||||||||||||  ||||| ||||||||||||| |||||| | | ||||| || ||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccacca--tttggggtattgtacgcaggcttaccgtat-ttttataccagag 32579457  T
Q  215 gctgtttccaggacttgaacc 235  Q
    |||||||||||||||||||||    
T  32579456 gctgtttccaggacttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 12892144 - 12892064
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgca 188  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||||||| ||||||    
T  12892144 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 23240837 - 23240943
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtt 220  Q
    ||||||| |||||||||||||||||  ||||  ||||||||||||||| ||  ||| |||||||||||  ||||||||||  ||||||||||||||||||    
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaatt--ggtatattgtacgcaaacttaccctgt--tttacacaagaggctgtt 23240932  T
Q  221 tccaggacttg 231  Q
    |||||||||||    
T  23240933 tccaggacttg 23240943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 28007716 - 28007634
Alignment:
Q  153 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||| |||||  ||||||||||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||    
T  28007716 ggaaggggtcccagcattt--ggtgtattgtacgcagcctgaccctgt--tttacacaagaggctctttccaggacttgaacccgtg 28007634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 8409311 - 8409249
Alignment:
Q  177 gtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtg 8409249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 3116129 - 3116210
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcag 189  Q
    ||||||||| | |||| ||| ||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||||    
T  3116129 aaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcag 3116210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 15865885 - 15865982
Alignment:
Q  136 cgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tcttttacacaagaggctgtttccaggacttgaac 234  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||  |||||||| |||||||| | ||||||  |||||||||||||||||| ||||||    
T  15865885 cgcaaacgcagggtccaggaaggggtcccacca--tttggtgtat--tacgcagctttaccctgtttttttacgtaagaggctgtttccaggaattgaac 15865980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 6808530 - 6808468
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 170  Q
    ||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  6808530 aaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 24734752 - 24734682
Alignment:
Q  135 ccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    ||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  24734752 ccgcatacgcaggatccgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgtttttt 24734682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 383759 - 383837
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgc 187  Q
    |||||||||||| |||| ||||||||||||||||||||||||||   ||||||||||||| |  |||||||||||||||||    
T  383759 taaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaa--tttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 23930127 - 23930246
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||  |||||||| ||||||||||||| |||||||||  |||||||||||||||  | |||||||||||||||| |  || | ||| ||||||    
T  23930127 aaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccacca--tctggtgtattgtacgcaac--tatcttgttttttac 23930222  T
Q  208 acaagaggctgtttccaggacttg 231  Q
    ||| ||| ||||||||| ||||||    
T  23930223 acatgagactgtttccatgacttg 23930246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 12889563 - 12889436
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||| || | |||||| |||||||| || ||  ||||||| | ||||||||||| | |||  ||||||||||| |||||||| |||||| ||| |    
T  12889563 taaagggcagcccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatcgttta-ggtgtattgtatgcagccttgccctgtttttaa 12889465  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||| || ||||||||||    
T  12889464 cacaagaggctgttttcaagacttgaacc 12889436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 22967312 - 22967182
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgta------ttgtacgcagccttaccctgt 200  Q
    |||||| ||| |||||||| |||| |||||||||| |||||||||| |||||||||||||||  |||||||||      ||||| ||||||||| ||| |    
T  22967312 taaaggccaatctggtgcaatgaaactcccgcataggcagggtccaagaaggggtcccacca--tttggtgtattgtatttgtatgcagccttatcctat 22967215  T
Q  201 cttttacacaagaggctgtttccaggacttgaac 234  Q
     |||||||||||| | |||||||| |||||||||    
T  22967214 -ttttacacaagaagttgtttccatgacttgaac 22967182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 23821081 - 23821211
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgta------ttgtacgcagccttaccctgt 200  Q
    |||||| ||| |||||||| |||| |||||||||| |||||||||| |||||||||||||||  |||||||||      ||||| ||||||||| ||| |    
T  23821081 taaaggccaatctggtgcaatgaaactcccgcataggcagggtccaagaaggggtcccacca--tttggtgtattgtatttgtatgcagccttatcctat 23821178  T
Q  201 cttttacacaagaggctgtttccaggacttgaac 234  Q
     |||||||||||| | |||||||| |||||||||    
T  23821179 -ttttacacaagaagttgtttccatgacttgaac 23821211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 14975094 - 14975209
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    ||||||| |||||||| || |||||||||| || |||| | |||||||||||||||||| |||||||||||            || ||| ||||||||||    
T  14975094 ggcaacccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattg------------ccttgttttttacacaa 14975181  T
Q  212 gaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||| |||||    
T  14975182 gaggctgtttccaggacttgaatccgtg 14975209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 11849159 - 11849063
Alignment:
Q  138 catacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacc 235  Q
    ||||||||| || | |||||||||||||||||||| ||||||||||  ||| | ||| ||||| ||| |||||||||| ||||||| |||||||||||    
T  11849159 catacgcagagttcgggaaggggtcccaccatttt-ggtgtattgtgggcaactttatcctgtttttaacacaagaggttgtttcctggacttgaacc 11849063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 13905011 - 13905108
Alignment:
Q  139 atacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgt 238  Q
    ||||||||||| | |||| |||||| |||||||  |||| |||||| ||||||||||||||| ||||||||||||||  |||| |||||||||| |||||    
T  13905011 atacgcagggttcgggaaagggtcc-accattt--ggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgt 13905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 4136567 - 4136646
Alignment:
Q  160 gtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||| |||| ||||| | |||||| ||||||||||| |||||||||||| | |||||  ||||||||||||||||    
T  4136567 gtcccaccaattttagtgtactctacgcaaccttaccctgtattttacacaagatgttgtttttaggacttgaacccgtg 4136646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 2755422 - 2755549
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgc--atacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||| |||||||| ||||||||||  ||| ||||| |   ||||||  |||||||||||||||||||||||||||||||||| ||| | |||      
T  2755422 aagggcaacc-ggtgcactaaagctcccgcgcatatgcaggatttgggaaggactcccaccatttttggtgtattgtacgcagccttagcctatttttgg 2755520  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
     | |||||| ||||| || ||||||||||    
T  2755521 tataagaggatgtttgcaagacttgaacc 2755549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 9671084 - 9671196
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || | |||| | ||||||||| ||  ||||||| | | ||||||||| |||||||| | ||||  ||| ||||||||||||||| ||||||    
T  9671084 aaagggcagcccgatgcattaaagctcccgtatttgcagggttcggaaaggggtcctaccatttt-gatgtaaagtaggcagccttaccctgttttttac 9671182  T
Q  208 acaagaggctgttt 221  Q
    ||||||||||||||    
T  9671183 acaagaggctgttt 9671196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 10734904 - 10734965
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    ||||||||| || |||| ||| ||||||||||||||||||||||| |||||||| |||||||    
T  10734904 taaagggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccacca 10734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 30786378 - 30786427
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggt 161  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  30786378 ggcaacccggtgcactaaagctcccgcatacgcacggtccaggaaggggt 30786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 32068229 - 32068107
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||  |||||||||| | ||||  |||||||||   ||||  |||||||||||||||||| |||||||||||  |||| ||| ||||| ||||||    
T  32068229 aaagggcagtctggtgcactaacgctctagcatacgcaaaatccaaaaaggggtcccaccatttt-ggtgtattgtaaacagcattatcctgttttttac 32068131  T
Q  208 acaagaggctgtttccaggacttgaac 234  Q
    |||||||   ||||||| |||||||||    
T  32068130 acaagag---gtttccaagacttgaac 32068107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 11395896 - 11395836
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    ||||||||| || |||| ||| ||||||||||||||||||| ||| ||||||||||||||||    
T  11395896 taaagggcagcc-ggtggactaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 20400737 - 20400677
Alignment:
Q  175 gtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacc 235  Q
    ||||| ||||||||| |||||||||| |||||||||||||  ||||||||  |||||||||    
T  20400737 gtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacc 20400677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 24751101 - 24751176
Alignment:
Q  136 cgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaag 212  Q
    |||||||||| ||| |  ||||||||| ||||||||| | |||||||||||||| |||||||| | |||||||||||    
T  24751101 cgcatacgcacggttcgtgaaggggtctcaccattttag-tgtattgtacgcagtcttaccctattttttacacaag 24751176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 17448389 - 17448330
Alignment:
Q  180 ttgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||| |||||||||| | | ||||| ||  |||||||||||||    
T  17448389 ttgtacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtg 17448330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 14341134 - 14341166
Alignment:
Q  174 ggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||||||||||||||||||||| |||||    
T  14341134 ggtgtattgtacgcagccttaccctgtttttta 14341166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 38879718 - 38879587
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||     
T  38879718 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttat 38879619  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  38879618 acaagaggctgtttccaggacttgaacccgtg 38879587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 41014453 - 41014325
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  41014453 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttac 41014357  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  41014356 acaagaggctgtttccaggacttgaacccgtg 41014325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 43334339 - 43334208
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| |||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  43334339 aaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttta 43334241  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| ||||||||||||||||||||||||||||    
T  43334240 cacaggaggctgtttccaggacttgaacccgtg 43334208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 4619104 - 4619235
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||| |||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  4619104 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 4619203  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||| |||||||||||||||||||||    
T  4619204 acaagaggctatttccaggacttgaacccgtg 4619235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 13801766 - 13801895
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| |||||||| |||||| |||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  13801766 taaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 13801865  T
Q  207 cacaagaggctgtttccaggacttgaaccc 236  Q
    |||||||||||| |||||||||||||||||    
T  13801866 cacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 24449025 - 24448896
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||| | ||||||    
T  24449025 aaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctattttttac 24448928  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| |||||||||||||||||||||||||||    
T  24448927 acaaaaggctgtttccaggacttgaacccgtg 24448896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 8169984 - 8170111
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  8169984 aaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 8170079  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| |||||||||||||||||||||||||||    
T  8170080 acaaaaggctgtttccaggacttgaacccgtg 8170111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 32703557 - 32703430
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  32703557 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 32703462  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  32703461 acaagaggctgtttccaggacttgaacccgtg 32703430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 27328868 - 27328762
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  27328868 aagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggac 27328769  T
Q  229 ttgaacc 235  Q
    |||||||    
T  27328768 ttgaacc 27328762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 20135740 - 20135623
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| |||||||||||||||| ||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  209 caagaggctgtttccagg 226  Q
    ||||||||||||||||||    
T  20135640 caagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 35710446 - 35710319
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||| | ||| |||||||||||||||||||  ||||||||| ||||||||||||||| |  |||||    
T  35710446 aaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccattt--ggtgtattgaacgcagccttaccctat--tttac 35710351  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  35710350 acaagaggctgtttccaggacttgaacccgtg 35710319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 19142956 - 19143072
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtt 220  Q
    ||||||| || |||||||||||||| ||||| ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccacca--tttggtgtactgtacgcagccttaccctgt-ttttacacaagaggttgtt 19143052  T
Q  221 tccaggacttgaacccgtgg 240  Q
    ||||||||||||||| ||||    
T  19143053 tccaggacttgaacctgtgg 19143072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 43574729 - 43574612
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||| || ||||||||||  |||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtatattgtacgcagccttaccctgttttctacacaagagattgt 43574632  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||||||||||||||| ||||    
T  43574631 ttccaggacttgaacacgtg 43574612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 28516433 - 28516563
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||||||| |||| ||||||| |||| |||||||||  |||| ||||||||||||||| | |||||||||||||||| || ||||| ||||||    
T  28516433 aaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccatttt-gatgtattgtacgcagccctagcctgttttttac 28516531  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||| ||||||||||||||    
T  28516532 acaagaggatgtttccaagacttgaacccgtg 28516563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 16880646 - 16880757
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||| |||| |||||||| ||||||||||||||||| ||||| ||||| |||| ||||||||  ||||||||||||||||||||||||||| |||||    
T  16880646 taaagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccattt--ggtgtattgtacgcagccttaccctgtttttta 16880743  T
Q  207 cacaagaggctgtt 220  Q
    ||||||||||||||    
T  16880744 cacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 7368528 - 7368413
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    |||||||| ||||||||  ||||||| |||| ||||||||| ||||||||||||||||   ||||||||||||||||||||||||||||  |||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagccttaccctg--ttttacaca 7368433  T
Q  211 agaggctgtttccaggactt 230  Q
    ||||||||||||||||||||    
T  7368432 agaggctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 7097759 - 7097870
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||| | ||||||||| ||||||||||||||||||||| | |||||||||| |||||  |||||||||||||||||| ||||||||||| |||||    
T  7097759 taaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcacca--tttggtgtattgtacgcaaccttaccctgt-tttta 7097855  T
Q  207 cacaagaggctgttt 221  Q
    |||||||||||||||    
T  7097856 cacaagaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 12006329 - 12006455
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||  |||||||| ||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||| | ||||||||||| | |||||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttaca 12006428  T
Q  209 caagaggctgtttccaggacttgaaccc 236  Q
     |||||| |||||||| |||||||||||    
T  12006429 taagaggttgtttcca-gacttgaaccc 12006455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 208939 - 209051
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||| |||    
T  208939 ggtgcactaaagctcttgcatacccagggtccaggaaggggtcccacca-ttttggtgtattgaatgcagccttaccctgt-ttttacacaagaggttgt 209036  T
Q  220 ttccaggacttgaac 234  Q
    | |||||||||||||    
T  209037 tgccaggacttgaac 209051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 12575659 - 12575779
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtct-ttt 205  Q
    ||||||||| || |||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||| | |||    
T  12575659 taaagggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccacca-ttttggtgtattgtacgcaactttagcctgtttattt 12575757  T
Q  206 acacaagaggctgtttccagga 227  Q
    || |||||||||||||||||||    
T  12575758 acgcaagaggctgtttccagga 12575779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 29334531 - 29334415
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||| | ||| |||| |||||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||| ||| ||||||    
T  29334531 aaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattct-ggtgtattgtacgcagccttaccttgttttttac 29334433  T
Q  208 acaagaggctgtttccag 225  Q
    ||||||||||||||||||    
T  29334432 acaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 22600568 - 22600461
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||  |||||||||||| |||||||||||||| |||||||||| |   ||||||||||||    
T  22600568 aagctcccgcatacgcaggatccgggaagggatcccaccattt--ggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggac 22600471  T
Q  229 ttgaacccgt 238  Q
    ||||||||||    
T  22600470 ttgaacccgt 22600461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 1565572 - 1565439
Alignment:
Q  102 ttgagtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-t 200  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||||| |||||||||||| |||  ||||||| ||||||||||||||||   || |    
T  1565572 ttgagtaaagggcaacccggtgcact-aagctcccacatatgcagggtccgggaaggggtcccgcca--tttggtgcattgtacgcagccttaatatgtt 1565476  T
Q  201 cttttacacaagaggctgtttccaggacttgaacccg 237  Q
     |||||| ||||||| |||||||||||||||||||||    
T  1565475 tttttactcaagaggttgtttccaggacttgaacccg 1565439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 22187423 - 22187295
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||||| |||||| ||||||| ||||| | |||||   |||||||||| ||   ||||||||||||||||||||| |||| | ||| |||||    
T  22187423 taaagggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgtttttta 22187324  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
    |||||||||||||||||||||||| ||||    
T  22187323 cacaagaggctgtttccaggacttaaacc 22187295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 42924842 - 42924963
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggt--ccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggct 217  Q
    |||||||| ||||| |||||||||||||||  |  ||||||| | ||| |||||||||||||||||||||| ||||||||||| |||||||||||| | |    
T  42924842 ggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttacacaagatgtt 42924941  T
Q  218 gtttccaggacttgaacccgtg 239  Q
    |||| |||||||||||| ||||    
T  42924942 gttttcaggacttgaactcgtg 42924963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 2838899 - 2838802
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    ||||| || |||||||||||||||||||||  |||||| |||||||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  2838899 tgcaccgatgctcccgcatacgcagggtccgagaagggatcccaccattt--ggtgtattgtacgcagccttaccctgt-ttttacacaagatgctgttt 2838803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 34154813 - 34154903
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 199  Q
    |||||||||||| ||||||||  |||| ||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  34154813 taaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 1405322 - 1405193
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||| | |||| |||  |||||||||||| ||||||| |||||| ||||||||||||||  |||||||||||||||  ||||| || | |||||     
T  1405322 aaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccattt--ggtgtattgtacgcaaacttactctattttttat 1405225  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    | |||||| |||||||||||||||||||||||    
T  1405224 ataagaggttgtttccaggacttgaacccgtg 1405193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 1850762 - 1850646
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||| |||||| |||||||||||||||| ||||||||||  |||| ||||||||||||| |||||  |||| |||||||||||||| | |    
T  1850762 ggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccacca--tttgatgtattgtacgcacccttattctgt-ttttacacaagaggttat 1850666  T
Q  220 ttccaggacttgaacccgtg 239  Q
    |||| |||||||||||||||    
T  1850665 ttccgggacttgaacccgtg 1850646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 39301235 - 39301129
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 231  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||||| ||| |||||| ||||||||||| || ||||||||||| |||| ||| ||||||    
T  39301235 ctcccacatacggagggtccgggaaggggtcccacc-tttttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttg 39301137  T
Q  232 aacccgtg 239  Q
    ||||||||    
T  39301136 aacccgtg 39301129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 16957449 - 16957374
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtac 185  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  16957449 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 25622595 - 25622524
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgta 179  Q
    ||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  25622595 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgta 25622524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 24323726 - 24323829
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||||||||  |||||||  |||||||||||||| ||||  || ||||| ||||||  ||||||||||||||||||||||||| ||||||||| ||    
T  24323726 aagctcccgcatatacagggtctgggaaggggtcccactattt--ggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaac 24323823  T
Q  229 ttgaac 234  Q
    ||||||    
T  24323824 ttgaac 24323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 24360350 - 24360453
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||||||||  |||||||  |||||||||||||| ||||  || ||||| ||||||  ||||||||||||||||||||||||| ||||||||| ||    
T  24360350 aagctcccgcatatacagggtctgggaaggggtcccactattt--ggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaac 24360447  T
Q  229 ttgaac 234  Q
    ||||||    
T  24360448 ttgaac 24360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 5873321 - 5873441
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||| || | |||||| |||||||||||||||||| |||| || ||| |||||||||   |||||||| |||||  ||||||||||| | |||||    
T  5873321 taaagggcatcccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccacca--attggtgtagtgtacttagccttaccctat-tttta 5873417  T
Q  207 cacaagaggctgtttccaggactt 230  Q
    |||||||||||||||||| |||||    
T  5873418 cacaagaggctgtttccacgactt 5873441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 37024626 - 37024683
Alignment:
Q  180 ttgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgt--tttacacaagaggctgtttccaggacttgaacccgtg 37024683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 41426055 - 41425954
Alignment:
Q  136 cgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacc 235  Q
    ||||| ||||| |||  |||||||||||||||| ||  ||||||||||| ||||||||||||||| |||||||||| | | ||||||||| |||||||||    
T  41426055 cgcatccgcagagtctgggaaggggtcccaccaatt--ggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacc 41425958  T
Q  236 cgtg 239  Q
    ||||    
T  41425957 cgtg 41425954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 22025601 - 22025552
Alignment:
Q  187 cagccttaccctgtcttttacacaagaggctgtttccaggacttgaaccc 236  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22025601 cagccttaccctgttttttacacaagaggctgtttccaggacttgaaccc 22025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 30006461 - 30006337
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||| ||||||| |||||||| ||||||||||||||  |||  || ||||||||||||||||  ||| ||||| ||||| ||||||||||||||  ||||    
T  30006461 taaaaggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccacca--tttagtgtaatgtacacagccttaccctgttgttta 30006364  T
Q  207 cacaagaggctgtttccaggacttgaa 233  Q
     | |||||| ||||| | |||||||||    
T  30006363 tataagaggttgttttccggacttgaa 30006337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 3771474 - 3771379
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    |||||||| || |||||||| |||||||| ||||| ||| |||| ||||||||||||||||   |||||||||||| | |||||||||||||| ||||    
T  3771474 aaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccacca--attggtgtattgttcacagccttaccctgtttttt 3771379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 10306495 - 10306548
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgt 183  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  10306495 aagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 12477132 - 12477205
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcctta 194  Q
    |||||||| ||||||  ||||||||||  ||| |||||||||||||||| |||||||||||||||||||||||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccacca-ttttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 23974840 - 23974786
Alignment:
Q  185 cgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtg 23974786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 22907913 - 22907990
Alignment:
Q  156 aggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaaccc 236  Q
    ||||||||||||||||  ||||||||||| ||| |||||| |||| |||||||||||||||||||||  ||||||||||||    
T  22907913 aggggtcccaccattt--ggtgtattgtatgcaaccttactctgt-ttttacacaagaggctgtttcttggacttgaaccc 22907990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 34074584 - 34074686
Alignment:
Q  130 agctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggact 229  Q
    ||||||| ||||||||||||   |||||||| ||  ||||||  ||||||||| ||||| ||||||  ||| ||||||||||||||||||||| ||||||    
T  34074584 agctcccccatacgcagggtttgggaaggggccctgccattt--ggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggact 34074681  T
Q  230 tgaac 234  Q
    |||||    
T  34074682 tgaac 34074686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 16028624 - 16028683
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacc 167  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||    
T  16028624 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 21784335 - 21784396
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 172  Q
    |||||||  |||||||| || |||||||||||||||||||| | ||||||||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 30877563 - 30877623
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacc 167  Q
    |||||||||||| ||||||||  ||||||| |||| ||||||||| |||||||||||||||    
T  30877563 taaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    ||||||| |||||||| ||||||||||||||| ||||||  ||||||||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 11657699 - 11657785
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttac 195  Q
    |||||||| || |||| ||| ||| |||||| |  ||||||| | |||||||||||||||| ||||||||||||||| ||||||||||    
T  11657699 aaagggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccacca-ttttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 32354262 - 32354211
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggg 159  Q
    ||||||||||| |||||||| |||||||||||||| |||||||| |||||||    
T  32354262 aaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 21542489 - 21542530
Alignment:
Q  130 agctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccattt 21542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 39079764 - 39079827
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtac 185  Q
    ||||||| || |||||| |||| || ||||| |||||||||||||||| ||||||||||||||||    
T  39079764 gtgcactaaaactcccgtatacacatggtccgggaaggggtcccacca-ttttggtgtattgtac 39079827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 13774988 - 13774921
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcag 189  Q
    |||||||| ||||||||||||||||||||||| | ||||| |||  |||  ||||||||||||| |||||    
T  13774988 ggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgcca--tttggtgtattgtgcgcag 13774921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 19438800 - 19438758
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtcc 151  Q
    |||||||||||||||||||  |||||||||||| |||||||||    
T  19438800 aagggcaacctggtgcactagagctcccgcatatgcagggtcc 19438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 4654426 - 4654479
Alignment:
Q  119 tggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 172  Q
    ||||||||| ||||||||||||| ||||||| |  |||||| ||||||||||||    
T  4654426 tggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccatttt 4654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 29184062 - 29184103
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtc 150  Q
    |||||||||| |||||||| ||||||||||||||||| ||||    
T  29184062 aagggcaacccggtgcactaaagctcccgcatacgcatggtc 29184103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 31694107 - 31694233
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||  |||||||||| || |||||||||||||| ||||  |||||| |||||| ||   | ||||||||||| ||||| ||| ||| | |||||    
T  31694107 taaagggcagtctggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatca--ataggtgtattgtatgcagctttagcctatttttta 31694204  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
    ||| || | || ||| || ||||||||||    
T  31694205 cacgagtgacttttttcaagacttgaacc 31694233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 10943845 - 10943900
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtccc 164  Q
    |||||||| || |||||||| ||||||||||||  ||||||||| ||||||||||||    
T  10943845 aaagggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtccc 10943900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 19093948 - 19093884
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 172  Q
    |||||||| || |||||||| |||||||  |||||||||||||| || |||||||  ||||||||    
T  19093948 aaagggcagcccggtgcactaaagctccaacatacgcagggtccgggtaggggtcataccatttt 19093884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 24313572 - 24313699
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggt-ccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||| || |||||||| ||||| | |||||| || ||  || |||||||||||||||| ||||||||||||| ||||| ||||| | ||| || ||    
T  24313572 aaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccacca-ttttggtgtattgaacgcaaccttatcttgttttcta 24313670  T
Q  207 cacaa-gaggctgtttccaggacttgaac 234  Q
    || || | || |||||||| |||||||||    
T  24313671 cagaagggggttgtttccaagacttgaac 24313699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 24355909 - 24356036
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggt-ccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||| || |||||||| ||||| | |||||| || ||  || |||||||||||||||| ||||||||||||| ||||| ||||| | ||| || ||    
T  24355909 aaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccacca-ttttggtgtattgaacgcaaccttatcttgttttcta 24356007  T
Q  207 cacaa-gaggctgtttccaggacttgaac 234  Q
    || || | || |||||||| |||||||||    
T  24356008 cagaagggggttgtttccaagacttgaac 24356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 8e-52; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 39460994 - 39461125
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| |||| ||||||    
T  39460994 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttac 39461093  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  39461094 acaagaggctgtttccaggacttgaacccgtg 39461125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 36720931 - 36720802
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  36720931 aaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttac 36720834  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  36720833 acaagaggctgtttccaggacttgaacccgtg 36720802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 107 - 239
Target Start/End: Complemental strand, 13160837 - 13160708
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  13160837 taaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-tttta 13160741  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||| ||||||||||||||||    
T  13160740 cacaagaggctgtttctaggacttgaacccgtg 13160708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 28817626 - 28817755
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||    
T  28817626 aaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattg--ggtgtattgtacgcagccttaccctgttttttac 28817723  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  28817724 acaagaggctgtttccaggacttgaacccgtg 28817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 35261814 - 35261685
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||    
T  35261814 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctgttttttac 35261717  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| ||||||||||| ||||||||||||    
T  35261716 acaagagactgtttccagggcttgaacccgtg 35261685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 44530284 - 44530155
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  44530284 aaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttac 44530187  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||| ||||||||||||||    
T  44530186 acaagaggttgtttccaagacttgaacccgtg 44530155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 6760959 - 6760828
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| || ||||||  ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  6760959 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttac 6760860  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  6760859 acaagaggctgtttccaggacttgaacccgtg 6760828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 45071398 - 45071271
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttaca 45071302  T
Q  209 caagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||| |||||||||||||    
T  45071301 caagaggctgtttccagaacttgaacccgtg 45071271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 44781517 - 44781635
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtt 220  Q
    ||||||| ||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  221 tccaggacttgaacccgtg 239  Q
    |||||||||||||||||||    
T  44781617 tccaggacttgaacccgtg 44781635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 7136527 - 7136655
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| |||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||    
T  7136527 aaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttac 7136626  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    |||||||| ||||||||||||||||||||    
T  7136627 acaagaggttgtttccaggacttgaaccc 7136655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 20870060 - 20869941
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  20870060 aaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 20869961  T
Q  208 acaagaggctgtttccagga 227  Q
    ||||||| ||||||||||||    
T  20869960 acaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 12670250 - 12670377
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| |||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  12670250 aaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 12670345  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  12670346 acaagaggctgtttccaggacttgaacccgtg 12670377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 20284075 - 20284202
Alignment:
Q  114 caacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccc--tgtcttttacacaa 211  Q
    ||||| |||||||| || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  | | ||||| ||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaa 20284174  T
Q  212 gaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||    
T  20284175 gaggctgtttccaggacttgaacccgtg 20284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 26954270 - 26954138
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    |||||||||||  ||||||| ||||||||||||| ||  ||||  |||||||||||||||||| |||||||||||||||||||||||||||| | |||||    
T  26954270 aaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttta 26954171  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||    
T  26954170 cacaagaggctgtttccaggacttgaacccgtg 26954138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 29521685 - 29521814
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||| |||||| |||||||| ||||||||||||||||||||||  ||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||     
T  29521685 aaagagcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccattt--ggtgtattgtacgcagccttaccctgttttttaa 29521782  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  29521783 acaagaggctgtttccaggacttgaacccgtg 29521814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 29877232 - 29877111
Alignment:
Q  105 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttt 204  Q
    |||| |||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||    
T  29877232 agtatagggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt 29877135  T
Q  205 tacacaagaggctgtttccaggac 228  Q
    ||||||| ||||||||||||||||    
T  29877134 tacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 21070703 - 21070831
Alignment:
Q  114 caacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccc---tgtcttttacaca 210  Q
    ||||| |||||||| || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||   | | ||||| |||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttataca 21070802  T
Q  211 agaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||    
T  21070803 agaggctgtttccaggacttgaacccgtg 21070831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 2626657 - 2626525
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg---tcttt 204  Q
    ||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||| ||  ||||||||||||||||||| |||||||||   | |||    
T  2626657 aaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatca--tttggtgtattgtacgcagtcttaccctgtttttttt 2626560  T
Q  205 tacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||||    
T  2626559 tacacaagaggctgtttccaggacttgaacccgtg 2626525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 30454097 - 30454224
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||| ||||||||||||||| ||  ||||||    
T  30454097 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtatcgtacgcagccttaccttg--ttttac 30454192  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  30454193 acaagaggctgtttccaggacttgaacccgtg 30454224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 5135290 - 5135418
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||  ||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||| | ||||||    
T  5135290 aaagggcagcccggtgcaca-aagctcctgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacacagccttaccctcttttttac 5135386  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  5135387 acaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 25250659 - 25250533
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| || |||||||||| || |||| | |||||||||||||||||| |||||||||||||||||||| |||||| | ||||||    
T  25250659 aaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttac 25250560  T
Q  208 acaagaggctgtttccaggacttgaac 234  Q
    |||| ||||||||||||||||||||||    
T  25250559 acaataggctgtttccaggacttgaac 25250533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 12626025 - 12625895
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||| |||| ||||||||| | |||||    
T  12626025 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccacca--tttggtgtattgtatgcagtcttaccctgttttttta 12625928  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||| |||||||||||||||| ||||||    
T  12625927 cacaagaggttgtttccaggacttgagcccgtg 12625895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 17823716 - 17823582
Alignment:
Q  103 tgagtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtct 202  Q
    |||||||||||||||| |||||||| ||||||| ||||| ||||||| | ||||||||| |||||||||  |||||||| ||||||| |||| ||||  |    
T  17823716 tgagtaaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccattt--ggtgtattttacgcagtcttatcctggtt 17823619  T
Q  203 tttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||||||    
T  17823618 tttacacaagaggctgtttccaggacttgaacccgtg 17823582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 8897764 - 8897893
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||| | ||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||| | ||||||    
T  8897764 aaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgtagccttaccctattttttac 8897861  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||| || |||||||||||||| ||||||||    
T  8897862 acaagcggttgtttccaggacttcaacccgtg 8897893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 18164764 - 18164888
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||  |||| || |   |||||||||||||||||| ||||||||||| ||||||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatc--ctttggtgtattgtacgcaaccttaccctgt-ttttacacaa 18164860  T
Q  212 gaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||    
T  18164861 gaggctgtttccaggacttgaacccgtg 18164888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 8483950 - 8484064
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    ||||| || ||||||||||||||||||||||  ||| |||||||||||| ||  |||||||||||||||||||| |||||| |||||||||||||| |||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaatt--ggtgtattgtacgcagccttgccctgttttttacacaagaggttgt 8484047  T
Q  220 ttccaggacttgaaccc 236  Q
    |||||||||||||||||    
T  8484048 ttccaggacttgaaccc 8484064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 17250888 - 17251001
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtt 220  Q
    ||||||| |||||||  |||||||||||| | |||| ||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||| |    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgct 17250987  T
Q  221 tccaggacttgaac 234  Q
    ||||||||||||||    
T  17250988 tccaggacttgaac 17251001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 16225157 - 16225045
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||| ||||| |||||||| ||||||||||||| || |||||| ||||||| |||||||||| |||||||||||||||||| |||||||||| |||||    
T  16225157 taaaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgtttttta 16225058  T
Q  207 cacaagaggctgt 219  Q
    || ||||||||||    
T  16225057 cataagaggctgt 16225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 24365080 - 24365189
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tcttttacacaagaggctgtttccagga 227  Q
    |||||||| |||||||||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||| | ||||||||||||||||||||| |||     
T  24365080 aagctcccacatacgcagggtccgggaaggggtcccacca--tttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctaggg 24365177  T
Q  228 cttgaacccgtg 239  Q
    ||||||||||||    
T  24365178 cttgaacccgtg 24365189  T

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Target: chr8; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 44742521 - 44742643
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    ||||| || |||||||| | |||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  44742521 gggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccatttt-ggtgtattgtacgcagccttaccctgttttttacaca 44742619  T
Q  211 agaggctgtttccaggacttgaac 234  Q
     |||  ||||||||| ||||||||    
T  44742620 ggagattgtttccagaacttgaac 44742643  T

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Target: chr8; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 10857964 - 10857845
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||   |||||||||||| ||||||||||||||| | |||||    
T  10857964 aaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccacca--attggtgtattgtgcgcagccttaccctgttttttta 10857867  T
Q  207 cacaagaggctgtttccaggac 228  Q
    |||||||||| |||||| ||||    
T  10857866 cacaagaggcggtttcctggac 10857845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 35106022 - 35105929
Alignment:
Q  145 agggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  35106022 agggtccaggaagaggtcccaccattct-ggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtg 35105929  T

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Target: chr8; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 20869523 - 20869625
Alignment:
Q  131 gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggactt 230  Q
    ||||||||||| ||||||||| |||||||||| ||||    |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc----ttggtgtattgtacacagccttaccctgt--tttacacaagaggctgtttccaggactt 20869616  T
Q  231 gaacccgtg 239  Q
    |||||||||    
T  20869617 gaacccgtg 20869625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 5689754 - 5689640
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||| |||||||| ||| | ||||||||| |||||||||  ||||||||||||||||||||||||||  |||||||||||||||| |    
T  5689754 ggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccattt--ggtgtattgtacgcagccttaccctgctttttacacaagaggctat 5689657  T
Q  220 ttccaggacttgaaccc 236  Q
    || || |||||||||||    
T  5689656 ttacaagacttgaaccc 5689640  T

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Target: chr8; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 389768 - 389649
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt--acacaagaggct 217  Q
    |||||||| |||||| |||||||||||||||  | ||||| ||||| |||||  ||||||||||||||| ||||||||||| ||||  |||||||||| |    
T  389768 ggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcattt--ggtgtattgtacgcaaccttaccctgtttttttgacacaagagggt 389671  T
Q  218 gtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||    
T  389670 gtttccaggacttgaacccgtg 389649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 22598282 - 22598163
Alignment:
Q  117 cctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggc 216  Q
    ||||||||||| ||| ||||||||||||| ||||| |||| ||||| ||||| ||  ||||||||||||  ||||||||||||| ||||||||||||||     
T  22598282 cctggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaatt--ggtgtattgtacatagccttaccctgttttttacacaagaggt 22598186  T
Q  217 tgtttccaggacttgaacccgtg 239  Q
    ||||||||||| |||||||||||    
T  22598185 tgtttccaggatttgaacccgtg 22598163  T

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Target: chr8; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 42083712 - 42083828
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||||| |||||||| | ||| |||||| | |||||||||||||||||||| ||| || ||||||||||||| |||  | |||||||||| |||||||||    
T  42083712 tgcactaaagctcccacgtacacagggttcgggaaggggtcccaccatttt-ggtatactgtacgcagccttgccccattttttacacaaaaggctgttt 42083810  T
Q  222 ccaggacttgaacccgtg 239  Q
    ||||||||||||||||||    
T  42083811 ccaggacttgaacccgtg 42083828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 31457307 - 31457179
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||| | ||||||||  ||||||||||||||||||||   ||||||||||| ||||  |||| ||||||||||||||||||  ||| | ||||||    
T  31457307 aaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctacca--tttgatgtattgtacgcagccttttcctat-ttttac 31457211  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| ||||| |||||||||||||||||    
T  31457210 acaagaggttgtttacaggacttgaacccgtg 31457179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 43942416 - 43942348
Alignment:
Q  153 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  43942416 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagaggctgttt 43942348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 14017989 - 14018095
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||| ||||||  ||||||||||||||| |||||||||| ||| | |||||||||||||| || ||||||| ||||||||||||| ||||||||| |||    
T  14017989 aagctaccgcatctgcagggtccaggaagtggtcccaccaatttag-tgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagac 14018087  T
Q  229 ttgaaccc 236  Q
    ||||||||    
T  14018088 ttgaaccc 14018095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 24245563 - 24245457
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccattttt-ggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccagga 227  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| || ||||||||||    |||| ||||| | ||||||||||    
T  24245563 aagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgt----tacataagagac-gtttccagga 24245469  T
Q  228 cttgaacccgtg 239  Q
    ||||||||||||    
T  24245468 cttgaacccgtg 24245457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 28407538 - 28407422
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||| | ||||||||||||||| ||||||| ||||||||||||||||  ||||||            |||||||||||| ||||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccacca--tttggt------------gccttaccctgt-ttttac 28407454  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  28407453 acaagaggctgtttccaggacttgaacccgtg 28407422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 11748391 - 11748305
Alignment:
Q  153 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| ||||||||| || |||||||||| | |||||||||  ||||||| ||||||||||||||| ||||||||||||||    
T  11748391 ggaaggggtcctaccattttttgtatattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtg 11748305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 19729475 - 19729363
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||| |  |||||||  |||||||| ||| ||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||  ||||||    
T  19729475 aaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacacagccttaccctg--ttttac 19729380  T
Q  208 acaagaggctgtttcca 224  Q
    | ||||| |||||||||    
T  19729379 ataagagactgtttcca 19729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 16013591 - 16013511
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgca 188  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||||  |||||||||| |||||||||| ||||||||||||||    
T  16013591 aaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

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Target: chr8; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 230
Target Start/End: Original strand, 23000225 - 23000338
Alignment:
Q  105 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttt 204  Q
    |||||||||||||| |||||||| |||||||||||| ||         |||||||||||||||||||  ||||||||||| | | ||||||| ||| |||    
T  23000225 agtaaagggcaacccggtgcactaaagctcccgcatccg---------ggaaggggtcccaccattt--ggtgtattgtatggaaccttaccgtgt-ttt 23000312  T
Q  205 tacacaagaggctgtttccaggactt 230  Q
    ||||||||||||||||||||||||||    
T  23000313 tacacaagaggctgtttccaggactt 23000338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 26102652 - 26102578
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgta 184  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||    
T  26102652 aaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccacca--tttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 33867088 - 33866957
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttt 205  Q
    |||||||||||| |||||||| ||||| | ||||||||||||| | |||||  ||  ||||||||||  ||||||||| |||| ||||||||| | ||||    
T  33867088 taaagggcaacccggtgcactaaagcttctgcatacgcagggttcgggaagaagtgtcaccattttttatgtattgtatgcagtcttaccctgctttttt 33866989  T
Q  206 acacaagaggctgtttccaggacttgaacccg 237  Q
    |||||| | | |||||  ||||||||||||||    
T  33866988 acacaaaaagttgtttttaggacttgaacccg 33866957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 27508044 - 27507985
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    |||| ||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  27508044 aaggacaacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 35107311 - 35107374
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    ||||||||||| |||||||| ||||| |||||||| ||| |||| |||||||||||||||||||    
T  35107311 aaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 27468092 - 27468141
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaag 157  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  27468092 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 30962847 - 30962896
Alignment:
Q  184 acgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaa 233  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaa 30962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 26457855 - 26457776
Alignment:
Q  115 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 198  Q
    |||| |||||||| |||||||| |||||||| |||| |||| |||||||||||| ||  |||||||||||||||||||||||||    
T  26457855 aacccggtgcactaaagctccctcatacgcaaggtc-agga-ggggtcccaccaatt--ggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 23286375 - 23286432
Alignment:
Q  158 gggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    ||||||||||||||  ||||||||||||||||| ||||||||  ||||||||||||||||||    
T  23286375 gggtcccaccattt--ggtgtattgtacgcagctttaccctg--ttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 36918198 - 36918135
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaac 234  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||   ||||||||| ||||||||    
T  36918198 tttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaac 36918135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 36486567 - 36486627
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 169  Q
    |||||||||| || ||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  36486567 aagggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 18595969 - 18595906
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttgg 175  Q
    ||||||| | |||||| || ||||||||||| |||||||| ||||||||||| | |||||||||    
T  18595969 ggcaacccgatgcactaaaactcccgcatacacagggtccgggaaggggtcctatcatttttgg 18595906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 30962770 - 30962814
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtcc 151  Q
    |||||||||||| ||| |||| || ||||||||||||||||||||    
T  30962770 taaagggcaacccggttcactaaatctcccgcatacgcagggtcc 30962814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 5e-50; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 107 - 239
Target Start/End: Complemental strand, 47716597 - 47716465
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| |||||||  ||||||||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  47716597 taaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 47716498  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||    
T  47716497 cacaagaggctgtttccaggacttgaacccgtg 47716465  T

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Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 42805661 - 42805530
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  42805661 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttac 42805562  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  42805561 acaagaggctgtttccaggacttgaacccgtg 42805530  T

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Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 7879773 - 7879644
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||    
T  7879773 aaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccttgttttttac 7879676  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||  |||||||||||||||||||||||    
T  7879675 acaagagattgtttccaggacttgaacccgtg 7879644  T

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Target: chr7; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 2541018 - 2541148
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||| |||| |||||||| |||||||||||||||||||| || |||||||||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  2541018 taaagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattt--ggtgtatagtacgcagccttaccctgtttttta 2541115  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||    
T  2541116 cacaagaggctgtttccaggacttgaacccgtg 2541148  T

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Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 21172009 - 21172136
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  21172009 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 21172104  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  21172105 acaagaggctgtttccaggacttgaacccgtg 21172136  T

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Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 43557610 - 43557481
Alignment:
Q  108 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||||| |||||||| || |||||||||||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  43557610 aaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttttta 43557511  T
Q  207 cacaagaggctgtttccaggacttgaaccc 236  Q
    ||||||||||||||||||||||||||||||    
T  43557510 cacaagaggctgtttccaggacttgaaccc 43557481  T

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Target: chr7; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 27629769 - 27629640
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||||||||||  |||||||| |||||| ||||||||||| ||||||    
T  27629769 aaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccattt--ggtgtattttacgcaaccttaccctgttttttac 27629672  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  27629671 acaagaggctgtttccaggacttgaacccgtg 27629640  T

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Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 11617589 - 11617713
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||| |||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttttaca 11617686  T
Q  209 caagaggctgtttccaggacttgaacc 235  Q
    ||||||| |||||||||||||||||||    
T  11617687 caagaggttgtttccaggacttgaacc 11617713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 10693072 - 10693200
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||||||  |||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||  |||||||    
T  10693072 taaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccc--tctttta 10693167  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||    
T  10693168 cacaagaggctgtttccaggacttgaacccgtg 10693200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 42391100 - 42391227
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  42391100 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 42391195  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||| |||||||||||||||||||||||||    
T  42391196 acaagaagctgtttccaggacttgaacccgtg 42391227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 32758394 - 32758271
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||  ||||||    
T  32758394 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacacagccttaccctg--ttttac 32758299  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||||||||||||||||    
T  32758298 acaagaggctgtttccaggacttgaacc 32758271  T

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Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 19426890 - 19427018
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||  |||||| |||||||||||  |||||||||||||||| |||||||| | ||||||    
T  19426890 aaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccattt--ggtgtattgtacgcagtcttaccctattttttac 19426986  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  19426987 acaagaggctgtttccaggacttgaacccgtg 19427018  T

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Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 33871909 - 33872036
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||| |||||||||||||||| |||||| ||||||| |||||||  ||||||||||||||||  |||||||||||||||||||||||| ||||| |||||    
T  33871909 taaaaggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccacca--tttggtgtattgtacgcagccttatcctgt-tttta 33872005  T
Q  207 cacaagaggctgtttccaggacttgaacccg 237  Q
    ||||||||| |||||||||||||||||||||    
T  33872006 cacaagaggttgtttccaggacttgaacccg 33872036  T

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Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 22698966 - 22699096
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaag-gggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    ||||||| |||| ||||||||  ||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22698966 taaagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttt 22699065  T
Q  206 acacaagaggctgtttccaggacttgaaccc 236  Q
    ||||||||| || ||||||||||||||||||    
T  22699066 acacaagagactatttccaggacttgaaccc 22699096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 46354302 - 46354200
Alignment:
Q  137 gcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaaccc 236  Q
    ||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 46354203  T
Q  237 gtg 239  Q
    |||    
T  46354202 gtg 46354200  T

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Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 40464011 - 40463883
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||| ||||||||||||||| || ||||||    
T  40464011 aaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccacca--tttggtgtattatacgcagccttacccagt-ttttac 40463915  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| ||||||| | ||||||||||||||    
T  40463914 acaagagactgtttctatgacttgaacccgtg 40463883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 42798804 - 42798675
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| | ||||||  |||||||||||| ||||||||| |||| ||||||||||||||  ||||||||||||||||||||||| ||| ||||||    
T  42798804 aaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccattt--ggtgtattgtacgcagccttaccttgttttttac 42798707  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| ||||||||| ||||||||||||||    
T  42798706 acaagagactgtttccaagacttgaacccgtg 42798675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 23419671 - 23419799
Alignment:
Q  105 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttt 204  Q
    ||||||||||| || | |||||| |||| |||||| ||||| |||| ||||||||||||||||||||  |||||||||||||||| |||||||||| |||    
T  23419671 agtaaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttt 23419768  T
Q  205 tacacaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||||||||| |||||||||    
T  23419769 tacacaagaggctgtttccagaacttgaacc 23419799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 29907552 - 29907425
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| |||||||| ||||||||||||||  ||||||| ||| |||||||||||||||| ||||||||| |||||||||||| || | |||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccatttt-ggtgtattgaacgcagccttacactattttttaca 29907456  T
Q  209 caagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| ||||||||||||||||    
T  29907455 caagaggctgtttctaggacttgaacccgtg 29907425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 48735121 - 48735250
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||  || |||||    
T  48735121 taaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttacc--gtgtttta 48735216  T
Q  207 cacaagaggctgtttcc-aggacttgaacccgtg 239  Q
    ||||||||| ||||||| ||||||||||||||||    
T  48735217 cacaagaggttgtttccaaggacttgaacccgtg 48735250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 239
Target Start/End: Original strand, 18512455 - 18512581
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    |||||||||  ||||||  ||||||||||||||||||||||| ||||||||||||||||  || ||||||||||||||||||||||||| | ||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcagccttaccctat-ttttacac 18512551  T
Q  210 aagaggctgtttccaggacttgaacccgtg 239  Q
    |||| | |||||||||||||||||||||||    
T  18512552 aagatgttgtttccaggacttgaacccgtg 18512581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 34626208 - 34626330
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| | || ||| ||||||||||||||||||||||| ||||||| ||||||||  |||||||||||| ||||||||||||||||| ||||||    
T  34626208 aaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccacca--tttggtgtattgaacgcagccttaccctgt-ttttac 34626304  T
Q  208 acaagaggctgtttccaggacttgaa 233  Q
    ||| ||||||||||||||||||||||    
T  34626305 acaggaggctgtttccaggacttgaa 34626330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 18747621 - 18747492
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tcttttac 207  Q
    ||||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||||   |||||||||| ||||||||||||||||| | ||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccacca--attggtgtattatacgcagccttaccctgcttttttac 18747524  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| |||||||||||| ||||||| ||||||    
T  18747523 acaaaaggctgtttccaagacttgatcccgtg 18747492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 7645066 - 7644962
Alignment:
Q  133 tcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttga 232  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||    
T  7645066 tcccgcatacgcagggtc-aggaaggggtcccacaatttt-ggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttga 7644969  T
Q  233 acccgtg 239  Q
    |||||||    
T  7644968 acccgtg 7644962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 35203555 - 35203445
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||| |||||||||||| |||| ||||| |||||||||||||  ||||||||||||    
T  35203555 aagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggac 35203456  T
Q  229 ttgaacccgtg 239  Q
    |||||||||||    
T  35203455 ttgaacccgtg 35203445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 39124030 - 39123896
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtctt 203  Q
    |||||||| | ||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    |||||||| ||    
T  39124030 aaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-tt 39123932  T
Q  204 ttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| | ||||| ||||||||||||||||    
T  39123931 ttacacaagagaccgtttctaggacttgaacccgtg 39123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 31591109 - 31591236
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||| ||||| ||||||||||||||||||| |  |||||||||||||||||||| |||  ||||||    
T  31591109 aaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttat--tgtattgtacgcagccttactctg--ttttac 31591204  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||||||||||||| ||||    
T  31591205 acaagaggttgtttccaggacttgaactcgtg 31591236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 42477005 - 42476879
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||||||||||||  |||||||||||| |||| | | |||||||||||||||||  |||||||||||||||||||||||||| ||  |||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccacca--tttggtgtattgtacgcagccttaccttg--ttttaca 42476910  T
Q  209 caagaggctgtttccaggacttgaacccgtg 239  Q
    |||||| |||||||||| ||||||| |||||    
T  42476909 caagagactgtttccagaacttgaatccgtg 42476879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 13805215 - 13805109
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||  | |||||||| ||||||| ||||||||||    
T  13805215 aagctcccgcatacgcagggtccaggaagtggtcccacca--tttggtgtattgtacacagccttaccc-ctgttttacaccagaggctatttccaggac 13805119  T
Q  229 ttgaacccgt 238  Q
    ||||||||||    
T  13805118 ttgaacccgt 13805109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 38604640 - 38604546
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccagg 226  Q
    ||||||||||||||||||||||| | |||||||| |||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38604640 aagctcccgcatacgcagggtccggaaaggggtctcacca--tttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 35787269 - 35787378
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||| |||  |||||||||||||||||| ||||||| ||| ||||||    
T  35787269 aaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgcca--tttggtgtattgtacgcaaccttaccatgt-ttttac 35787365  T
Q  208 acaagaggctgtt 220  Q
    |||||||||||||    
T  35787366 acaagaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 19266564 - 19266459
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||  ||||||||||||||||||||||||||| |||||| |||| |||| ||| ||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaattt--ggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggac 19266467  T
Q  229 ttgaaccc 236  Q
    ||||||||    
T  19266466 ttgaaccc 19266459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 38262196 - 38262325
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||| | |||||||| |||||||||||||||||| || | ||||||||||||| |||||  ||||||||||| ||| | ||||| | | ||||||    
T  38262196 aaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcattt--ggtgtattgtatgcaacattaccatattttttac 38262293  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| ||||||||||||||||||||||||    
T  38262294 acaagagactgtttccaggacttgaacccgtg 38262325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 21566559 - 21566445
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||||||||||| ||||||| | ||||||||||| |||||||| |||||||||||||||| ||| | |||| ||||||||||||||| ||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccatttt-ggtgtattgtacgcagtcttcctctgttttttacacaagaggcggt 21566461  T
Q  220 ttccaggacttgaacc 235  Q
    ||||| ||||||||||    
T  21566460 ttccaagacttgaacc 21566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 239
Target Start/End: Original strand, 35334818 - 35334943
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    |||| |||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||  || |||||||||||| ||| |||||||||| ||||||||    
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagtcttaccctgttttttacac 35334915  T
Q  210 aagaggctgtttccaggacttgaacccgtg 239  Q
      ||| ||||||||||||||||||| ||||    
T  35334916 --gagactgtttccaggacttgaactcgtg 35334943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 3469176 - 3469301
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg--tctttta 206  Q
    ||||||||||  | ||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||  | |||||    
T  3469176 aagggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgtttttttta 3469275  T
Q  207 cacaagaggctgtttccaggacttga 232  Q
    ||||||||  |||||| |||||||||    
T  3469276 cacaagagaatgtttctaggacttga 3469301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 16341413 - 16341284
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    ||||||| || |||||||  ||||||||||||| |   ||||| ||||| || ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  16341413 aagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccatttt-ggtgtattgtacgtagccttaccctgttttttaca 16341315  T
Q  209 caagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| || |||||||||||||    
T  16341314 caagaggctgtttctagaacttgaacccgtg 16341284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 1408563 - 1408469
Alignment:
Q  137 gcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaa 233  Q
    ||||||||||||||| |||||||||||||||||||  | |||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||||    
T  1408563 gcatacgcagggtccgggaaggggtcccaccattt--gctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 48123508 - 48123610
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 231  Q
    |||||||||| ||| ||||||| |||||||||||||||||  ||||||||||| ||||  |||||||||  |||||||||||||||||||||||||||||    
T  48123508 ctcccgcatatgcatggtccagaaaggggtcccaccattt--ggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttg 48123605  T
Q  232 aaccc 236  Q
    |||||    
T  48123606 aaccc 48123610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 14732833 - 14732948
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||||||||  |||||| | |||||| ||  ||||||||||||||||||| ||||||||||||||||| |||||||   ||||||||    
T  14732833 ggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggctgt 14732931  T
Q  220 ttccaggacttgaaccc 236  Q
    |||||||||||||||||    
T  14732932 ttccaggacttgaaccc 14732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 19265948 - 19265821
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||| |||||||| |||| | ||| ||| |||||||||||||||||||  ||||||||||||||||||||||||| | ||||||    
T  19265948 aaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctct-ttttac 19265853  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||| |||||| |||| ||||||||||||||    
T  19265852 acaagcggctgtatccaagacttgaacccgtg 19265821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 45018923 - 45019010
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca--tttttggtgtattgtacgcagcctt 193  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||  |||||||| ||||||||||||||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcagcctt 45019010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 32233135 - 32233260
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || ||||||||||||||||| |||| |||||||   ||||||  |||||||||||  |||||| | ||||| |||||||||||| ||||||    
T  32233135 aaagggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccattt--ggtgtaatatacgctgccttaccctgt-ttttac 32233231  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    |||||||| ||||||||||||||||||||    
T  32233232 acaagaggttgtttccaggacttgaaccc 32233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 33500635 - 33500558
Alignment:
Q  123 gcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgt 33500558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 23231694 - 23231573
Alignment:
Q  106 gtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    |||||||| |||  |||||||| ||||| ||||||||||||||| | ||||||||||||| ||||   |||||||| |||||||||||||| | | ||||    
T  23231694 gtaaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattc--ggtgtattatacgcagccttaccttatatttt 23231597  T
Q  206 acacaagaggctgtttccaggact 229  Q
    |||||||||||| |||||||||||    
T  23231596 acacaagaggctctttccaggact 23231573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 2662958 - 2663058
Alignment:
Q  130 agctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggact 229  Q
    |||||||||||| ||||||||  | || ||||||||||||||  ||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  2662958 agctcccgcatatgcagggtct-gaaaagggtcccaccattt--ggtgtattgtacgcagccttaccctat--tttacacaagaggctgtttccaggact 2663052  T
Q  230 tgaacc 235  Q
    ||||||    
T  2663053 tgaacc 2663058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 28362166 - 28362270
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||| |||| ||| ||||  |||||||||||||||||||  |||||||||||||||||||||||  || ||||||||||||||| ||||| |||||    
T  28362166 aagctcccacatatgcaaggtctgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggac 28362263  T
Q  229 ttgaacc 235  Q
    |||||||    
T  28362264 ttgaacc 28362270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 27889316 - 27889399
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcctt 193  Q
    ||||||||||| |||| ||  ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  27889316 aaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 11741927 - 11741804
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| ||||||||  |||||||||||  ||||  ||| ||||||| |||||||||||  ||||||||||||||||||||||||  | |||||||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccattt--ggtgtattgtacgcagccttaccc--tattttaca 11741832  T
Q  209 caagaggctgtttccaggacttgaaccc 236  Q
    | ||| ||||||| ||||||||||||||    
T  11741831 ctagaagctgttttcaggacttgaaccc 11741804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 14099030 - 14099132
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 231  Q
    |||| ||||||| ||||| | |||||||||||||||||||  |||||||||||||||| |||| ||||| |||||||||| ||||| ||||||||||||     
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14099127  T
Q  232 aaccc 236  Q
    |||||    
T  14099128 aaccc 14099132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 14409047 - 14409149
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 231  Q
    |||| ||||||| ||||| | |||||||||||||||||||  |||||||||||||||| |||| ||||| |||||||||| ||||| ||||||||||||     
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14409144  T
Q  232 aaccc 236  Q
    |||||    
T  14409145 aaccc 14409149  T

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Target: chr7; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 47077867 - 47077982
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    ||||||||  |||||||||||| | |||||   ||||||||||||||||||||  |||||||||||||| | |||| || |  |||||||||||| ||||    
T  47077867 ggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccatttt--gtgtattgtacgcaactttactctat--tttacacaagagactgt 47077962  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||    
T  47077963 ttccaggacttgaacccgtg 47077982  T

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Target: chr7; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 12473380 - 12473313
Alignment:
Q  169 tttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaaccc 236  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||| ||||| ||||||||||||||    
T  12473380 tttttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaaccc 12473313  T

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Target: chr7; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 42101899 - 42102009
Alignment:
Q  123 gcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttc 222  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||| ||| |  ||| |||||||||  ||||||||| ||||||  |||||||||||||    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttaga-gtactgtacgcagtgttaccctgttttttacggaagaggctgtttc 42101997  T
Q  223 caggacttgaac 234  Q
    ||||||||||||    
T  42101998 caggacttgaac 42102009  T

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Target: chr7; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 5180202 - 5180283
Alignment:
Q  155 aaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaaccc 236  Q
    ||||||||| | |||||||||||| |||||| ||| |||||||||| ||| |||||||||||||||||||| | ||||||||    
T  5180202 aaggggtccaatcatttttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaaccc 5180283  T

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Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 8148945 - 8149075
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt- 205  Q
    ||||||| || ||| |||||| || ||| |||||||||| | ||  |||||||||||||||||||  ||||||||||||||| ||||||||| | ||||     
T  8148945 taaagggtaatctgatgcactaaaactctcgcatacgcaag-tctgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctatttttta 8149041  T
Q  206 acacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||  |||| |||||||||||| ||||    
T  8149042 acacaagaggtagttttcaggacttgaactcgtg 8149075  T

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Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 18327091 - 18327040
Alignment:
Q  187 cagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  18327091 cagccttaccctgt-ttttacacaagaggctgtttccgggacttgaacccgtg 18327040  T

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Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 11888473 - 11888414
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccac 166  Q
    ||||||||||||  ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  11888473 taaagggcaacccagtgcactgaagctcctgcatacacagggtccagaaaggggtcccac 11888414  T

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Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 28078153 - 28078260
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||| |||||| ||||| | | ||||||||||||||||  |||||||||||| | ||| ||||||||||| ||||  ||| ||| ||||||| |||||    
T  28078153 aagctctcgcatatgcaggattcgggaaggggtcccacca--tttggtgtattgcatgcaaccttaccctgt-ttttttacacgagactgtttctaggac 28078249  T
Q  229 ttgaacccgtg 239  Q
    |||||||||||    
T  28078250 ttgaacccgtg 28078260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 27697572 - 27697452
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtc-caggaaggggt--cccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||| || |||||| | ||||||||||||||||||||||   |||| ||||  ||||||| |||||||||||  ||| ||||||| |||||  |||||    
T  27697572 agggcatcccggtgcatttaagctcccgcatacgcagggtctggggaaagggtcccccacca-ttttggtgtat--tacacagccttgccctgattttta 27697476  T
Q  207 cacaagaggctgtttccaggactt 230  Q
    ||||||||| ||||||||||||||    
T  27697475 cacaagaggttgtttccaggactt 27697452  T

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Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 42495916 - 42495964
Alignment:
Q  190 ccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  42495916 ccttaccctgt-ttttatacaagaggctgtttccaggacttgaacccgtg 42495964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 1423967 - 1424039
Alignment:
Q  167 catttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| |||||||| |||| ||||| ||||||||| |||||||||| || |||||||||||| ||||| |||||    
T  1423967 cattattggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtg 1424039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 15108458 - 15108525
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  ||||||||||||||||||| ||||    
T  15108458 tttgatgtattgtacacagccttaccttgt-ttttacacaagaaactgtttccaggacttgaactcgtg 15108525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 7794582 - 7794635
Alignment:
Q  188 agccttaccctgtctttt--acacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||    
T  7794582 agccttaccctgttttttttacataagaggctgtttccaggacttgaacccgtg 7794635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 25434143 - 25434050
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagag 214  Q
    |||||||| |||||||||||||||||||||||| ||||  |||  |||| ||||||||| ||||| |||  |||||| ||| |||| ||||||||    
T  25434143 ggtgcactaaagctcccgcatacgcagggtccaagaagaagtcatacca-ttttggtgtgttgtatgcactcttaccatgttttttgcacaagag 25434050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 36602582 - 36602540
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtc 150  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  36602582 aaagggcaacccggtgcactaaagctcccgcatacgcagggtc 36602540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 44123643 - 44123749
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||| |||||||||| ||||  ||| ||||||||  || |  ||||||||  | ||| ||||||| ||| |||||||||||||||||||||||| ||    
T  44123643 aagctcctgcatacgcagtgtccgagaacgggtcccattatat--ggtgtatttcatgcaaccttaccttgt-ttttacacaagaggctgtttccagtac 44123739  T
Q  229 ttgaacccgt 238  Q
    ||||||||||    
T  44123740 ttgaacccgt 44123749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 17048826 - 17048914
Alignment:
Q  119 tggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||| |||| |||||||  |||| ||| | ||| ||||||||| |||||||||| ||||||||||||| | ||||||||||| |||||||    
T  17048826 tggttcactaaagctcctacataagcaagttccgggaaggggttccaccatttt-ggtgtattgtacgtaaccttaccctgttttttaca 17048914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 6736963 - 6736896
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| |||| |||||| ||| ||||| |||||||| |||||  ||||||||||||||||    
T  6736963 tttggtgtattgtatgcagtcttaccttgt-ttttatacaagaggttgttttgaggacttgaacccgtg 6736896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 42495865 - 42495913
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggg 159  Q
    |||||||  |||||||| ||||||||||||||||||||||| |||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 43852111 - 43852049
Alignment:
Q  176 tgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||  ||||||||||||| ||||||| |||||| | ||| |||||||||||||||||    
T  43852111 tgtattgtacatagccttaccctgttttttacagaagagg-ttttttcaggacttgaacccgtg 43852049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 21139761 - 21139851
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagag 214  Q
    ||||||| ||||| |||||||| ||| || | ||||||||||||||||  ||||||||| ||||  || |||||| |||| |||||||||||||    
T  21139761 gtgcactaaagcttccgcatacacagagttcgggaaggggtcccacca--tttggtgtactgtatccaaccttactctgt-ttttacacaagag 21139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 36267829 - 36267900
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccagg-aaggggtcccaccatttttggtgtattgtacgcagcct 192  Q
    |||||||| |||||||||||||| |||||| | || || |||||| ||||  ||||||||||||||||||||||    
T  36267829 ggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaacca--tttggtgtattgtacgcagcct 36267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 13792162 - 13792250
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    |||||||  ||||||| ||||||||||||| |  ||||||||||| ||| ||| ||||||||||| |||| ||||||  || ||||||||    
T  13792162 ggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgcca-tttgggtgtattgtatgcagtcttaccaagttttttacac 13792250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 7193127 - 7193091
Alignment:
Q  203 tttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtg 7193091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 23987383 - 23987455
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtat 180  Q
    ||||| |||| ||||||||| || ||| || ||||||||||||    ||||||||| ||||||||||||||||    
T  23987383 aaaggacaacttggtgcactaaaactctcgtatacgcagggtctgaaaaggggtcctaccatttttggtgtat 23987455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 39093439 - 39093530
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    |||||||| || |||||||| ||||| | ||||| ||| | ||| ||||||| |||||| ||| | |||||||||||| ||| ||||||||||    
T  39093439 aaagggcagcccggtgcactaaagcttctgcatatgcaagttccgggaagggttcccactattat-ggtgtattgtacacagtcttaccctgt 39093530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 5648393 - 5648265
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  5648393 aaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttac 5648297  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  5648296 acaagaggctgtttccaggacttgaacccgtg 5648265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 20639658 - 20639777
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  20639658 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttt-ggtgtattgtacgcagccttaccctgttttttac 20639756  T
Q  208 acaagaggctgtttccaggac 228  Q
    |||||||||||||||||||||    
T  20639757 acaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 16408601 - 16408732
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| ||||||||| |||||||| |||||||||||||||||| |||||||||| ||||||    
T  16408601 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttac 16408700  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  16408701 acaagaggctgtttccaggacttgaacccgtg 16408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 44363129 - 44363261
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| |||||||| |||||    
T  44363129 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgtttttta 44363228  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||| |||||||||| |||||||||||| ||||    
T  44363229 cacacgaggctgttttcaggacttgaactcgtg 44363261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 47444092 - 47443963
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  ||||||||||||||| ||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  47444092 aaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttac 47443995  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
     |||||||||||||||||||||||||||||||    
T  47443994 gcaagaggctgtttccaggacttgaacccgtg 47443963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 40915962 - 40915835
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccacca--tttggtgtattgtacgcagccttaccttgt-ttttaca 40915866  T
Q  209 caagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||    
T  40915865 caagaggctgtttccaggacttgaacccgtg 40915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 6430627 - 6430754
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 208  Q
    |||||||||| ||||| || ||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttaca 6430723  T
Q  209 caagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||| ||||||||||||||    
T  6430724 caagaggctgtttccatgacttgaacccgtg 6430754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 16911699 - 16911568
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||  ||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||  || |||    
T  16911699 aaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtac 16911600  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||| ||||||||||||||||    
T  16911599 acaagaggctgtttctaggacttgaacccgtg 16911568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 21647098 - 21646974
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    |||||||| |||||||| ||||||||||||| || |||||  |||||||||||||||||| ||||| ||||||||||||||||||||| | |||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  211 agaggctgtttccaggacttgaacc 235  Q
    |||||||||||||||||||||||||    
T  21646998 agaggctgtttccaggacttgaacc 21646974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 23501924 - 23501813
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  23501924 aaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttac 23501825  T
Q  208 acaagaggctgt 219  Q
    ||||||||||||    
T  23501824 acaagaggctgt 23501813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 20225117 - 20224993
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 20225022  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    |||||||| ||||||||||||||||||||    
T  20225021 acaagaggttgtttccaggacttgaaccc 20224993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 48598825 - 48598952
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||| ||||| ||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||||  |||||    
T  48598825 aaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgt--tttac 48598920  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  48598921 acaagaggctgtttccaggacttgaacccgtg 48598952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 30639514 - 30639390
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  ||||||| ||||||||||||| ||||||||| |||||||||| |||||  |||||||||||||||||||||||||||||| ||||||    
T  30639514 aaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcacca--tttggtgtattgtacgcagccttaccctgt-ttttac 30639418  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||| ||||||||||||||||||||    
T  30639417 acaagagtctgtttccaggacttgaacc 30639390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 110 - 239
Target Start/End: Original strand, 29207900 - 29208025
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    ||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttacac 29207995  T
Q  210 aagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||  |||||||||||||||||||||    
T  29207996 aagaggcaatttccaggacttgaacccgtg 29208025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 9832313 - 9832440
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  || ||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  9832313 aaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 9832408  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| |||||||||||||||||    
T  9832409 acaagaggctgttttcaggacttgaacccgtg 9832440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 17043398 - 17043519
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    ||||| ||||||||| | ||||||| ||||| ||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  17043398 gggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtattttacaca 17043494  T
Q  211 agaggctgtttccaggacttgaacc 235  Q
    |||||||||||||||||||||||||    
T  17043495 agaggctgtttccaggacttgaacc 17043519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 47528530 - 47528653
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  ||||||| ||||  |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  47528530 aaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 47528625  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||||||||||||||||    
T  47528626 acaagaggctgtttccaggacttgaacc 47528653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 54175200 - 54175069
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccagg-aaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||| || |||||||| ||||||||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  54175200 aaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccatttt-ggtgtattgtacgcagccttaccctgt-tttta 54175103  T
Q  207 cacaagaggctg-tttccaggacttgaacccgtg 239  Q
    |||||||||||| ||||||||||||||| |||||    
T  54175102 cacaagaggctgttttccaggacttgaatccgtg 54175069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 30690173 - 30690312
Alignment:
Q  105 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg----- 199  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||||||| ||||||||||||||         
T  30690173 agtaaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagccttaccctgttttt 30690270  T
Q  200 --tcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
      | |||||||||||||||| |||||||||||||||||||||    
T  30690271 tattttttacacaagaggctttttccaggacttgaacccgtg 30690312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 5306660 - 5306792
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccg----catacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctt 203  Q
    ||||||||||| |||||| | |||||||||    |||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||  ||    
T  5306660 aaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctga-tt 5306756  T
Q  204 ttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||||||    
T  5306757 ttacacaagaggctgtttccaggacttgaacccgtg 5306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 35567305 - 35567179
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||| ||||||||||| ||||||||| | |||||||||||||||||||  ||||| |||||| |||||||||||||| ||||||    
T  35567305 aaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccattt--ggtgtgttgtacacagccttaccctgttttttac 35567208  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    ||||| ||||||||||| |||||||||||    
T  35567207 acaagtggctgtttccaagacttgaaccc 35567179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 14983969 - 14983840
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| ||| ||||||||| | ||||||    
T  14983969 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttagtgtattgtaggcaaccttaccctattttttac 14983872  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||| | |||||||| |||||    
T  14983871 acaagaggctgtttcaaagacttgaatccgtg 14983840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 54730375 - 54730255
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct-gtcttttacacaagaggctg 218  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||| |||| |||||||||| |||||||||||| |||  | |||||||||||||||||    
T  54730375 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctg 54730276  T
Q  219 tttccaggacttgaacccgtg 239  Q
    |||| ||||||||||||||||    
T  54730275 tttctaggacttgaacccgtg 54730255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 30352580 - 30352720
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagc----cttaccctg---- 199  Q
    ||||||||||  |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    |||||||||        
T  30352580 aaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgtttt 30352679  T
Q  200 -tcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
     | ||||||||||||||||||||||||||||  ||||||||    
T  30352680 tttttttacacaagaggctgtttccaggactctaacccgtg 30352720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 13256399 - 13256522
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||| | || |||| | |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  13256399 aaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttac 13256498  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    |||||||||    |||||||||||||||    
T  13256499 acaagaggc----tccaggacttgaacc 13256522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 20225212 - 20225118
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtc 201  Q
    |||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20225212 taaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtc 20225118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 25629184 - 25629069
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| | ||||||| ||||||||||||||||  ||||||||||||||| |||||||||||| | ||||||    
T  25629184 aaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccacca--tttggtgtattgtacacagccttaccctattttttac 25629087  T
Q  208 acaagaggctgtttccag 225  Q
    ||||||| ||||||||||    
T  25629086 acaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 11054148 - 11054275
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||| || |||  ||||||||||||||||||| |||||||||  ||||||    
T  11054148 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgcca--tttggtgtattgtacgcagtcttaccctg--ttttac 11054243  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| |||||| |||||||||||||||||    
T  11054244 acaagagactgttttcaggacttgaacccgtg 11054275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 19027971 - 19027854
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||| ||||||||| |||  | |||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||| | |||    
T  19027971 ggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaatt--ggtgtattgtacgcagccttaccctgttttttacacaagatgttgt 19027874  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||    
T  19027873 ttccaggacttgaacccgtg 19027854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 21489202 - 21489099
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||| ||||| |||| |||||| ||||||||||||||||||||    
T  21489202 aagctcccgcatacgcagggttcgggaaggggtcccaccatttt-ggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccaggac 21489104  T
Q  229 ttgaa 233  Q
    |||||    
T  21489103 ttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 25343321 - 25343197
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    ||||| || ||||| || |||||| | |||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||    
T  25343321 gggcagccgggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttttacaca 25343222  T
Q  211 agaggctgtttccaggacttgaacc 235  Q
    |||| || ||||||| |||||||||    
T  25343221 agagactatttccagaacttgaacc 25343197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 25463256 - 25463128
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| | ||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||  ||||| ||||||||| |||| ||| || ||||||    
T  25463256 aaagggtagcctggtgcaca-aagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtgttgtacgcaacctttcccagttttttac 25463160  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| |||||||||||||||||||||||    
T  25463159 acaagaggttgtttccaggacttgaacccgtg 25463128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 20908636 - 20908761
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| ||| ||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| | | |||||     
T  20908636 aaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgcagccttaccttcttttttag 20908734  T
Q  208 acaagaggctgtttccaggacttgaac 234  Q
    | |||| | |||||||| |||||||||    
T  20908735 aaaagacgatgtttccatgacttgaac 20908761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 37494972 - 37494861
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||||| ||||||| ||||||||||||||| | |||||||||||||||||  ||| ||||||| ||| ||||||||||| |||||||||||||| |||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccattt--ggtatattgtatgcaaccttaccctgttttttacacaagaggttgttt 37494875  T
Q  222 ccaggacttgaacc 235  Q
    ||||||||||||||    
T  37494874 ccaggacttgaacc 37494861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 51865050 - 51865149
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||| | ||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccattt--ggtgtattgtacgcagccttaccatgttttttacacaagaggctgt 51865147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 7909281 - 7909397
Alignment:
Q  109 aagggcaacctggtgcactgaagctccc-gcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||| | |||||| |||||||| ||||||||||||| | ||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctgt-ttttac 7909377  T
Q  208 acaagaggctgtttccagga 227  Q
    ||||||| ||||||||||||    
T  7909378 acaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 8473621 - 8473747
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcaggg-tccagg-aaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||| |||||||| ||||||||||||| |||||| ||| || |||||||||||||||||  ||||||||||| |||||||||||||||  |  |    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccattt--ggtgtattgtatgcagccttaccctgt--taaa 8473716  T
Q  207 cacaagaggctgtttccaggacttgaacccg 237  Q
    |||||||||||||||||||||||||||||||    
T  8473717 cacaagaggctgtttccaggacttgaacccg 8473747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 49796914 - 49796818
Alignment:
Q  126 ctgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccag 225  Q
    |||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  49796914 ctgaagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcagccttaccatgt-tttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 9987846 - 9987957
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||| | ||||||||||||| ||| |||| ||||||||||||||||||||  ||||||||||| ||||||||||||| |  ||||||||||||| |||    
T  9987846 ggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccattt--ggtgtattgtatgcagccttaccctattgtttacacaagaggttgt 9987943  T
Q  220 ttccaggacttgaa 233  Q
    ||||||||||||||    
T  9987944 ttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 39029081 - 39029186
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||| ||||||||| | ||| |||||||||||||| | |||||||||| |||||||||||||| ||||||||||||||||||||||| | |    
T  39029081 aagctcccgcatatgcagggtccggaaagtggtcccaccattttcg-tgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggc 39029179  T
Q  229 ttgaacc 235  Q
    |||||||    
T  39029180 ttgaacc 39029186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 39077800 - 39077923
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    ||||||| ||||||||  |||||||||||| ||||||||| | |||  ||| ||||||||  ||| ||||||||||| |||||||||||  |||||||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccattt--ggtatattgtacgcaaccttaccctgt--tttacacaa 39077895  T
Q  212 gaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||    
T  39077896 gaggctgtttccaggacttgaacccgtg 39077923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 36589876 - 36589753
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    ||||| || |||||||  ||||||||||||||  ||||| |||||||||||||||||||||| |||||| |||   |||| ||||| ||| |||||||||    
T  36589876 gggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccatttt-ggtgtactgtcaacagcattaccatgttttttacaca 36589778  T
Q  211 agaggctgtttccaggacttgaacc 235  Q
    |||||||||||||||||||||||||    
T  36589777 agaggctgtttccaggacttgaacc 36589753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 20405224 - 20405109
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    |||||||||||   |||||| ||||||||||||| || |||||| |||||||||||||||||| || ||||||||||||||  ||||||||| | |||||    
T  20405224 aaagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgttttttta 20405125  T
Q  207 cacaagaggctgtttc 222  Q
    ||||||||||||||||    
T  20405124 cacaagaggctgtttc 20405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 7385499 - 7385605
Alignment:
Q  131 gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggactt 230  Q
    |||||||||||| |||||||| |||| ||||||||||||||  ||||||||| || || ||||||||| | ||||||||| ||||||||||||||| |||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccattt--ggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggctt 7385596  T
Q  231 gaacccgtg 239  Q
    |||||||||    
T  7385597 gaacccgtg 7385605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 10660519 - 10660415
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||| ||  |||||||||| ||||||| ||||||||||||| |||||| |||||| | ||||||| |||||| ||||||||||||    
T  10660519 aagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggac 10660421  T
Q  229 ttgaac 234  Q
    ||||||    
T  10660420 ttgaac 10660415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 10874664 - 10874560
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||| ||  |||||||||| ||||||| ||||||||||||| |||||| |||||| | ||||||| |||||| ||||||||||||    
T  10874664 aagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggac 10874566  T
Q  229 ttgaac 234  Q
    ||||||    
T  10874565 ttgaac 10874560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 30581481 - 30581593
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tcttttacacaagaggctgtttc 222  Q
    |||| |||||||  |||| ||||||||| |||||||||||||||| |||||||||||||||| || |||||||||| | |||||||||||||| ||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccacca-ttttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttc 30581579  T
Q  223 caggacttgaaccc 236  Q
    || |||||||||||    
T  30581580 cacgacttgaaccc 30581593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 33836487 - 33836563
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgta 184  Q
    ||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  33836487 aaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 36816384 - 36816475
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    ||||||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||    
T  36816384 aaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacc-tttttggtgtattgtacgcagccctgccctgt 36816475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 32478791 - 32478910
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||| ||| |||||||  |||||||||||||||| |||||| |||||||||||||||||||  ||||||||     |||||||||||||| |||||    
T  32478791 taaagggccacccggtgcaca-aagctcccgcatacgctgggtccgggaaggggtcccaccattt--ggtgtatt-----cagccttaccctgt-tttta 32478881  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
    ||| ||||| |||||||||||||||||||    
T  32478882 cactagaggttgtttccaggacttgaacc 32478910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 49938614 - 49938715
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||| |||||||   |||||||||||||||||||| |||||||||||| |   ||||||| || |||||||||||||||||||||||||||    
T  49938614 aagctcccgcatatgcagggtatgggaaggggtcccaccatttt-ggtgtattgtacac---cttaccccgt-ttttacacaagaggctgtttccaggac 49938708  T
Q  229 ttgaacc 235  Q
    |||||||    
T  49938709 ttgaacc 49938715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 7038187 - 7038063
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  ||||||| ||||||| | ||||||||||||| || ||| | ||||||||||| ||||||||||||| || |||||||| | ||||||    
T  7038187 aaagggcaacccagtgcactaaagctcc-gtatacgcagggtccgggtaggtgccccaccatttt-ggtgtattgtacgaagtcttaccctattttttac 7038090  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    |||||| ||||||| |||||||||||||    
T  7038089 acaagaagctgttt-caggacttgaacc 7038063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 38755907 - 38755970
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 170  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  38755907 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 41018807 - 41018922
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtt 220  Q
    ||||||| |||| ||  |||||||| ||||  |||||||||||||| ||||  ||||||||||||| |||||||||||   |||||||||||||| ||||    
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactattt--ggtgtattgtacgtagccttaccctaa-ttttacacaagaggttgtt 41018903  T
Q  221 tccaggacttgaacccgtg 239  Q
    |||||||||||||||||||    
T  41018904 tccaggacttgaacccgtg 41018922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 487138 - 487264
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat-------ttttggtgtattgtacgcagccttaccctgtcttttacacaag 212  Q
    |||||||| |||||||||||| |||||  ||| |||||||||||| ||||       |||| |||||||||||||||| ||||| ||| || ||||||||    
T  487138 ggtgcactaaagctcccgcattcgcagaatccgggaaggggtcccgccatcccaccattttagtgtattgtacgcagctttaccttgttttatacacaag 487237  T
Q  213 aggctgtttccaggacttgaacccgtg 239  Q
    ||| |||||||| ||||||||||||||    
T  487238 aggttgtttccaagacttgaacccgtg 487264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 11394988 - 11394924
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  11394988 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 11404715 - 11404651
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  11404715 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 48327761 - 48327869
Alignment:
Q  106 gtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    |||||||| |||| |||||||| || || ||||||| |  |||| | ||||| |||||||||||| ||||||||||||| |||| |||||||||| ||||    
T  48327761 gtaaagggtaacccggtgcactaaaacttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgtttttt 48327860  T
Q  206 acacaagag 214  Q
    |||||||||    
T  48327861 acacaagag 48327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 23580220 - 23580337
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||| ||||| |||| |||| ||||||||| | ||||||| |||||||  ||||||| ||| |||||| |||||||||||||||| |    
T  23580220 ggtgcactaaagctcccacatacacagg-tccaagaaggggtctcgccatttt-ggtgtatcctacgcagtcttcccctgttttttacacaagaggctct 23580317  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||| || |||||||||||||    
T  23580318 ttctagaacttgaacccgtg 23580337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 47441551 - 47441655
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||| || ||| |||||||| ||||||||||| |||||||  |||||||||||| |||||||||||||  ||||||| ||||| |||||||  ||||    
T  47441551 aagctcctgcttactcagggtccgggaaggggtccaaccattt--ggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggac 47441648  T
Q  229 ttgaacc 235  Q
    |||||||    
T  47441649 ttgaacc 47441655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 55830721 - 55830844
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| ||||||||||| |||||| |||||||||| ||||| ||| ||||| ||||||  ||  |||||||||||||||| ||||||||| ||  ||    
T  55830721 aaagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccacca--ttcagtgtattgtacgcagcattaccctgt-ttacac 55830817  T
Q  208 acaagaggctgtttccaggacttgaac 234  Q
    ||||||| |||||||||  ||||||||    
T  55830818 acaagagactgtttccaaaacttgaac 55830844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 40553936 - 40553998
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 169  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  40553936 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 54967134 - 54967032
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||| | ||||| | |||||||||||||||||||  ||| ||||||| ||| ||||||||||| |||||||||||||| | ||||||| ||    
T  54967134 aagctcccgcatatgtagggtacgggaaggggtcccaccattt--ggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaac 54967038  T
Q  229 ttgaac 234  Q
    ||||||    
T  54967037 ttgaac 54967032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 10277781 - 10277884
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 231  Q
    |||||||||| ||||||||  |||||||||  ||||||||  ||||||||||||||||||||| ||| |  |||| ||||||||||||||| |||| |||    
T  10277781 ctcccgcatatgcagggtctgggaaggggtttcaccattt--ggtgtattgtacgcagccttatcctat--tttatacaagaggctgtttcaaggatttg 10277876  T
Q  232 aacccgtg 239  Q
    ||||||||    
T  10277877 aacccgtg 10277884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 32484368 - 32484307
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 169  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  32484368 aaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 55766466 - 55766591
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||| |||||| |||||||||| ||||| ||| ||||| ||||||||    |||||||||||||||||||||||||| ||  ||    
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattca--gtgtattgtacgcagccttaccctgt-ttacac 55766562  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    ||||||  |||||||||  ||||||||||    
T  55766563 acaagaaactgtttccaaaacttgaaccc 55766591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 16494338 - 16494262
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    |||| ||||| |||||||| |||||||  |||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgt 16494262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 30496334 - 30496449
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||  |||| ||| ||||| |||||| ||||| ||||||  ||||||||||| |||||||||||| || ||| ||||||||||||||    
T  30496334 ggtgcactaaagctccatcataagcacggtccgggaaggagtccccccattt--ggtgtattgtatgcagccttaccc-gtgttt-acacaagaggctgt 30496429  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||||| ||||||||| ||||    
T  30496430 ttccatgacttgaacacgtg 30496449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 25388312 - 25388249
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 170  Q
    |||||||||||| |||||||| ||||||  ||||||||||||||| ||||||||||||||||||    
T  25388312 taaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 38786744 - 38786681
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  38786744 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 47482871 - 47482918
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47482871 aagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 47482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 2813263 - 2813170
Alignment:
Q  108 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    ||||||||| | |||||||| || |||||||||||||||  || | |||| ||||||||||||| ||| |||||||||||||| ||||||||||    
T  2813263 aaagggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcagtcttaccctgt 2813170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 51420646 - 51420586
Alignment:
Q  173 tggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaa 233  Q
    ||||||||||||| |||||||||||||| || ||||||||||| |||||||| ||||||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaa 51420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 32629293 - 32629397
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 231  Q
    ||||| |||||||| ||||| |||||||||||| ||| ||| ||||||| ||| || |||||||||||| ||||  ||||||||||||||| |||| |||    
T  32629293 ctcccacatacgcaaggtccgggaaggggtcccgccaattt-ggtgtat-gtaggcggccttaccctgttttttt-acaagaggctgtttcgaggatttg 32629389  T
Q  232 aacccgtg 239  Q
    ||||||||    
T  32629390 aacccgtg 32629397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 14590922 - 14590843
Alignment:
Q  159 ggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt-acacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||| | ||||||||||||||| |||||||||| |||||    
T  14590922 ggtcccaccattt--gatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtg 14590843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 35532127 - 35532077
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaagg 158  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  35532127 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 42164224 - 42164277
Alignment:
Q  185 cgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  42164224 cgcagccttaccctgt-ttttacacaagaggttgtttccaagacttgaacccgtg 42164277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 44718703 - 44718641
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 169  Q
    |||||||||||| ||||  || ||||||||||||||||||||||  |||||||||||||||||    
T  44718703 taaagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 17079691 - 17079777
Alignment:
Q  148 gtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaaccc 236  Q
    ||||||||| ||||||||||||||   | |||||||| ||||||||||||||| || |||||||||   |||||||| |||||||||||    
T  17079691 gtccaggaaagggtcccaccattta--gcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaaccc 17079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 35894492 - 35894563
Alignment:
Q  139 atacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||  |||||| ||| ||||||||||    
T  35894492 atacgcatgatccgggaaggggtcccaccatttt-ggtgtattgtacgcacacttaccgtgttttttacacaa 35894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 3580861 - 3580945
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagagg 215  Q
    |||||||| |||| ||||||||| ||||||||||| | |||||  ||||||||| || |||||||||| ||  ||||||||||||||    
T  3580861 aagctcccacatatgcagggtccgggaaggggtcctagcattt--ggtgtattgcacacagccttaccatggtttttacacaagagg 3580945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 50555656 - 50555718
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 170  Q
    |||||||| || |||||||| || |||| ||||||||||||||| ||||||||| ||||||||    
T  50555656 aaagggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 43035307 - 43035254
Alignment:
Q  186 gcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| ||| | |||||||||||| ||||||| |||||||||||||||    
T  43035307 gcagccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtg 43035254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 54640431 - 54640468
Alignment:
Q  202 ttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  54640431 ttttacacaagaggctgtttccaagacttgaacccgtg 54640468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 48033449 - 48033379
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtccc-accatttttggtgtattgtacgcagc 190  Q
    |||||||| ||||||||||||||||| ||||||  |||||||||| |||||||| |||||||| ||| ||||    
T  48033449 ggtgcactaaagctcccgcatacgcaaggtccacaaaggggtccccaccatttt-ggtgtattatacacagc 48033379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 8820643 - 8820581
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 170  Q
    ||||| ||| ||| |||||| || ||| |||||||||||||||  ||||||||||||||||||    
T  8820643 aaaggacaatctgatgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 12711450 - 12711537
Alignment:
Q  109 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 198  Q
    |||||||||  |||||||| ||| | ||||||||||  ||||   ||||||||||| ||||||  |||||||||||||||| ||||||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccattt--ggtgtattgtacgcagtcttaccct 12711537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 17315375 - 17315427
Alignment:
Q  186 gcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||| ||| |||||||||||||| |||||| |||| |||||||||||    
T  17315375 gcagccttaccttgt-ttttacacaagaggttgtttcgaggaattgaacccgtg 17315427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 41549425 - 41549388
Alignment:
Q  202 ttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  41549425 ttttacacaagaggttgtttccagaacttgaacccgtg 41549388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 49938490 - 49938561
Alignment:
Q  160 gtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaa 233  Q
    ||||||||||||| | || |||| ||||||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  49938490 gtcccaccatttt-gatgaattggacgcagccttaccctgt-ttttacacaatacgctgcttccaagacttgaa 49938561  T

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Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 19028046 - 19027986
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    |||||||| || |||||||| ||||||||||||| |  |||||| |||||| |||||||||    
T  19028046 aaagggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 37038132 - 37038164
Alignment:
Q  117 cctggtgcactgaagctcccgcatacgcagggt 149  Q
    ||||||||||| |||||||||||||||||||||    
T  37038132 cctggtgcactaaagctcccgcatacgcagggt 37038164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 10668385 - 10668254
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||    
T  10668385 aaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttac 10668286  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  10668285 acaagaggctgtttccaggacttgaacccgtg 10668254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 30395726 - 30395857
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||  |||||||| ||||||||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  30395726 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 30395825  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  30395826 acaagaggctgtttccaggacttgaacccgtg 30395857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 35005283 - 35005152
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  35005283 aaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttac 35005184  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| || ||||||||||||||    
T  35005183 acaagaggctgttttcaagacttgaacccgtg 35005152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 18944804 - 18944676
Alignment:
Q  108 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  18944804 aaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttttta 18944705  T
Q  207 cacaagaggctgtttccaggacttgaacc 235  Q
    |||||||||||||||||||| ||||||||    
T  18944704 cacaagaggctgtttccaggccttgaacc 18944676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 27201807 - 27201679
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||   |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | | ||    
T  27201807 aaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgac 27201708  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    |||||||||||||||||||||||||||||    
T  27201707 acaagaggctgtttccaggacttgaaccc 27201679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 46247953 - 46248082
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||||| ||||||    
T  46247953 aaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttttac 46248050  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||| ||||||||||||||    
T  46248051 acaagaggctgtttccaagacttgaacccgtg 46248082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 20004090 - 20004221
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||| || |||||  |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  20004090 aaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttac 20004189  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    || |||||||||||||||||||||||||||||    
T  20004190 acgagaggctgtttccaggacttgaacccgtg 20004221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 32632557 - 32632685
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| ||||||||||||| ||||||||||||| |||||||   ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  32632557 aaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt-ttttac 32632653  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  32632654 acaagaggctgtttccaggacttgaacccgtg 32632685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 34725098 - 34725225
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||  ||||||    
T  34725098 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttagtgtattgtacgcagccttaccctg--ttttac 34725193  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||||    
T  34725194 acaagaggctgtttccaggacttgaacccgtg 34725225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 239
Target Start/End: Complemental strand, 46991959 - 46991833
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||   |||||||||||| |||||||||||||| |||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattc--ggtgtattgtacacagccttaccctgttttttacaca 46991862  T
Q  211 agaggctgtttccaggacttgaacccgtg 239  Q
    ||||| |||||||||||||||||||||||    
T  46991861 agaggttgtttccaggacttgaacccgtg 46991833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 35117777 - 35117897
Alignment:
Q  120 ggtgcactgaagctcccgcat-acgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctg 218  Q
    |||||||| ||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||     
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggcta 35117876  T
Q  219 tttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||    
T  35117877 tttccaggacttgaacccgtg 35117897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 35253187 - 35253314
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||| | ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  35253187 aaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 35253282  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||| ||||||||||||||||    
T  35253283 acaagaggctgtttcgaggacttgaacccgtg 35253314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 11596649 - 11596542
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||| |||||| |||||    
T  11596649 aagctcccgcatacgcagggtccaggaaggggtcccacca--tttggtgtattatacgcagccttaccctgt-ttttacacaagaggttgtttctaggac 11596553  T
Q  229 ttgaacccgtg 239  Q
    |||||||||||    
T  11596552 ttgaacccgtg 11596542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 22325049 - 22324925
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    |||||| ||||||||||| ||||||||||||||||||||||  ||| ||||  |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtcg-ggacggggctccaccatttttggtgtattgtatgcagccttaccctgt-ttttacac 22324952  T
Q  210 aagaggctgtttccaggacttgaaccc 236  Q
    ||||||||||||||| |||||||||||    
T  22324951 aagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 23768334 - 23768445
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccattt--ggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 23768431  T
Q  222 ccaggacttgaacc 235  Q
    ||| ||||||||||    
T  23768432 ccatgacttgaacc 23768445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 38478282 - 38478409
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| |||||||||  |||||||| ||||||  |||||||||||||||||||||||||||||  ||||||    
T  38478282 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccacca--tttggtgtattgtacgcagccttaccctg--ttttac 38478377  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||| ||||||||||||||||    
T  38478378 acaagaggctgtttctaggacttgaacccgtg 38478409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 6925246 - 6925129
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||||   |||||||||| |||||||||||||| | |||||||||||||||| |    
T  6925246 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattc--ggtgtattgtccgcagccttaccctattttttacacaagaggctat 6925149  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||    
T  6925148 ttccaggacttgaacccgtg 6925129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 14617196 - 14617067
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| |||| |||||||| ||||||||||||| ||||||||| ||||||| |||||||||||  ||||||||||||||| ||||||| |||  |||||    
T  14617196 aaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccattt--ggtgtattgtacgcaaccttaccttgttatttac 14617099  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||| ||||    
T  14617098 acaagaggctgtttccaggacttgaactcgtg 14617067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 31382214 - 31382330
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||| || | ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| ||||||    
T  31382214 aaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcagccttatcctgt-ttttac 31382310  T
Q  208 acaagaggctgtttccagga 227  Q
    ||||||||||||||||||||    
T  31382311 acaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 4349798 - 4349699
Alignment:
Q  106 gtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  4349798 gtaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgtttttt 4349701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 19932755 - 19932856
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    |||||||||||||||||| | | ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19932755 agggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 19932854  T
Q  210 aa 211  Q
    ||    
T  19932855 aa 19932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 9939622 - 9939490
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaagggg-tcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||| |||| |||||||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||||| ||||||| ||| | |||    
T  9939622 aaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttctta 9939523  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
     |||||||| |||||||||||||||||| ||||    
T  9939522 aacaagaggttgtttccaggacttgaactcgtg 9939490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 41319806 - 41319931
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||  |||||||||| |||||||||| | ||||| | ||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||    
T  41319806 aaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcattt--ggtgtattgtacgcagccttaccctgttttttac 41319903  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||| ||||||||||||||| ||||    
T  41319904 acaagagactgtttccaggacttaaacc 41319931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 45402251 - 45402124
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcag-cctt--accctgtcttttac 207  Q
    |||||||| |||||||| ||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||  |||  ||||||| ||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca--tttggtgtattgtacgcagaacttgaaccctgt-ttttac 45402155  T
Q  208 acaagaggctgtttccaggacttgaacccgt 238  Q
    |||||||||||||||||||||||||||||||    
T  45402154 acaagaggctgtttccaggacttgaacccgt 45402124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 15511150 - 15511271
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgta--cgcagccttaccctgtcttttac 207  Q
    |||||| || |||||||| |||||| | |||||||||||||||||||||||| |||||| |||||||||||||||  |||||||||||||||| ||||||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccacca-ttttggtgtattgtatccgcagccttaccctgttttttac 15511248  T
Q  208 acaagaggctgtttccaggactt 230  Q
    ||||||||| |||||||||||||    
T  15511249 acaagaggcggtttccaggactt 15511271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 18724566 - 18724674
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||| | ||||||| |||||||||||||  ||||  |||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  18724566 aagctcccgcatatgtagggtccgggaaggggtcccaagattt--ggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggac 18724663  T
Q  229 ttgaacccgtg 239  Q
    |||||||||||    
T  18724664 ttgaacccgtg 18724674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 19701729 - 19701599
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| | ||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||| || |||||||  || ||||||    
T  19701729 aaagggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccacca-ttttggtgtattgtacccatccttaccaagttttttac 19701631  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||| || ||||| ||||||||    
T  19701630 acaagaggctgttttcatgacttaaacccgtg 19701599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 18741957 - 18742054
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    |||||| |||| |||||||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18741957 aaagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 19414595 - 19414468
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||| | ||||||||||||||||  |||||||||||||||||||||||| ||||  ||||||    
T  19414595 aaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccacca--tttggtgtattgtacgcagccttaacctg--ttttac 19414500  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    | |||||||| |||| ||||||||||||||||    
T  19414499 ataagaggctctttctaggacttgaacccgtg 19414468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 47214667 - 47214540
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||| || ||||||||||  |||||||||||| ||||||||  ||||||||||||||||  |||||||||||||||||| ||||||||||  |||||     
T  47214667 aaagggtaatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctg--ttttaa 47214572  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| ||||||||||||||||||||||||    
T  47214571 acaagagactgtttccaggacttgaacccgtg 47214540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 27474438 - 27474314
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||  ||  |||||||||||||||| || |||||| ||||||    
T  27474438 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcagtgtattgtacgcagctttgccctgt-ttttac 27474342  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||| ||||||||| ||||||||||    
T  27474341 acaagagactgtttccaagacttgaacc 27474314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 2435798 - 2435916
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||||||||| || ||||| | | |||||||||||||||||| |||||||||||||||| |||||||| | ||| ||||| ||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccatttt-ggtgtattgtacgcaggcttaccctatttttcacacaggaggctgt 2435896  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||    
T  2435897 ttccaggacttgaacccgtg 2435916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 17470361 - 17470472
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||||| |||||||| ||||||||||   |||||| ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17470361 tgcactaaagctcccacatacgcaggt--caggaacgggtcccactatttt-ggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 17470457  T
Q  222 ccaggacttgaaccc 236  Q
    | |||||||||||||    
T  17470458 ctaggacttgaaccc 17470472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 12126837 - 12126964
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||   |||||||  |||||||||||| ||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||  ||||||    
T  12126837 aaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaa--tttggtgtattgtacgcagccttaccctg--ttttac 12126932  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||| ||||||||||| |||| ||||||||    
T  12126933 acaagaagctgtttccagaacttaaacccgtg 12126964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 42304207 - 42304299
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    ||||||||| | |||||||| |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  42304207 aaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgt 42304299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 25468285 - 25468389
Alignment:
Q  130 agctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggact 229  Q
    |||||||||||||||||||||  ||||| ||||| |||||||  ||||||||||||||| ||||||||||  |||||||||||||| |||||||||||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccattt--ggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggact 25468382  T
Q  230 tgaaccc 236  Q
    |||||||    
T  25468383 tgaaccc 25468389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 27136663 - 27136781
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    ||||||||| ||||||||||||| || | || ||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||| |||    
T  27136663 ggtgcactggagctcccgcatacacatgatctaggaaggggtcccaccatttt-ggtgtattgtacgcaaccttaccatgttttttacacaagaggttgt 27136761  T
Q  220 ttccaggacttgaacccgtg 239  Q
    | |||| |||||||| ||||    
T  27136762 tcccagaacttgaactcgtg 27136781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 44485130 - 44485238
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  44485130 aagctcccgcatacgtaggatccgggaaggggtccaaccattt--ggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggac 44485227  T
Q  229 ttgaacccgtg 239  Q
    |  ||||||||    
T  44485228 tataacccgtg 44485238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 45264411 - 45264524
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||||||||||| ||||||||   ||||||||||||||||||| ||||||||| || ||||||||| |||| |||| ||||||||| |||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccatttt-ggtgtattgcacacagccttactctgttttttgcacaagaggttgt 45264509  T
Q  220 ttccaggacttgaac 234  Q
    |||||||||||||||    
T  45264510 ttccaggacttgaac 45264524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 45812541 - 45812660
Alignment:
Q  112 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaa 211  Q
    ||||||| ||||||||  |||||||||||| |||||||   ||||||||||||||||  |||||||||||||| ||||||||||||  ||||||||||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccacca--tttggtgtattgtatgcagccttaccc--tcttttacacaa 45812636  T
Q  212 gaggctgtttccaggacttgaacc 235  Q
    ||| |||||| |||||||||||||    
T  45812637 gagactgttttcaggacttgaacc 45812660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 8197201 - 8197072
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||| |||| |||||||  ||||||||||||||  |||||||||| |||||||  |||||| |||||| ||||||||| ||| ||||||    
T  8197201 aaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccattt--ggtgtactgtacgtagccttaccatgttttttac 8197104  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||  || ||||||||||||||||||    
T  8197103 acaagaggcaattaccaggacttgaacccgtg 8197072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 10378738 - 10378825
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    ||||| || |||||||| ||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccacca--tttggtgtattgtacgcagccttaccctgt 10378825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 50606561 - 50606487
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattg 182  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  50606561 aaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtattg 50606487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 6983811 - 6983934
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||  ||||||| || |||||||||||| | ||||||||||||||  ||||||||||||||||||  |||||||||| |||||     
T  6983811 aaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccacca--tttggtgtattgtacgcatacttaccctgttttttat 6983908  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||  ||||||||||||||||||||||||    
T  6983909 ac--gaggctgtttccaggacttgaacc 6983934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 23796623 - 23796507
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||| ||||||| ||||| ||||||||  |||||||||| ||||||||  ||||||||||||||| ||||||  ||  ||||||    
T  23796623 aaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccattt--ggtgtattgtacgcaaccttacattgatttttac 23796526  T
Q  208 acaagaggctgtttccagg 226  Q
    |||||||||||||||||||    
T  23796525 acaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 39214961 - 39215083
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacaca 210  Q
    ||||| || |||||||| ||||| || ||||||||||||   |||||||| ||||||||||| ||  |||||||||||||||||||| || |||||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccatttt-ggaatattgtacgcagccttacccagttttttacaca 39215059  T
Q  211 agaggctgtttccaggacttgaac 234  Q
    ||||| ||||||||| ||||||||    
T  39215060 agaggttgtttccagtacttgaac 39215083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 22930104 - 22930193
Alignment:
Q  143 gcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaaccc 236  Q
    |||||||||||||||||||||||||||||  |||||||||| | || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  22930104 gcagggtccaggaaggggtcccaccattt--ggtgtattgt-cacaaccttaccctgt-ttttacacaaaaggctgtttccaggacttgaaccc 22930193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 20036355 - 20036249
Alignment:
Q  132 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtct-tttacacaagaggctgtttccaggactt 230  Q
    |||| ||||||||||||||| ||||||||| |||||||||  ||||||||| |||||  |||||||| ||| ||||||||||||  ||||||||||||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccattt--ggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggactt 20036258  T
Q  231 gaacccgtg 239  Q
    |||||||||    
T  20036257 gaacccgtg 20036249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 50812098 - 50811979
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tctttta 206  Q
    |||||||| ||  ||||| | ||||||||||||||||||||  | ||||||||||| |||||||| ||||||||||||||| |||||||||| | |||||    
T  50812098 aaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accatttt-ggtgtattgtacgcaaccttaccctgttttttta 50812001  T
Q  207 cacaagaggctgtttccaggac 228  Q
    ||||||| ||||||||||||||    
T  50812000 cacaagaagctgtttccaggac 50811979  T

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Target: chr1; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 31442396 - 31442515
Alignment:
Q  115 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg-tcttttacacaaga 213  Q
    |||| |||||||  |||||||| ||||| ||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||| || |    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccacca-ttttggtgtattgtacgcatccttaccctgtttttttacataaaa 31442494  T
Q  214 ggctgtttccaggacttgaac 234  Q
    ||||||||| | |||||||||    
T  31442495 ggctgtttctaagacttgaac 31442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 19974074 - 19974203
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| ||  ||||||| ||||||||||||||  || |||| |||| |||||||| |||||| ||||||||||||||| |||| |||| | ||||||    
T  19974074 aaagggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcatttt-ggtgtattgtacgcaaccttgccctat-ttttac 19974171  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    ||  ||||||||||||| ||||||||||||||    
T  19974172 acttgaggctgtttccaagacttgaacccgtg 19974203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 1517311 - 1517418
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt-a 206  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||   |||||||||||||||   ||||||||||||||||||||||| | ||| |||| |    
T  1517311 aaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca--attggtgtattgtacgcagccttatcatgttttttaa 1517408  T
Q  207 cacaagaggc 216  Q
    ||||||||||    
T  1517409 cacaagaggc 1517418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 20999850 - 20999957
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||||| |||||||||| |||||||||| | |||||||| |||| |||||  |||||||||||||||||||| || ||| ||||||    
T  20999850 aaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcattt--ggtgtattgtacgcagccttgccttgttttttac 20999947  T
Q  208 acaagaggct 217  Q
    ||||| ||||    
T  20999948 acaagtggct 20999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 15505701 - 15505631
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtc 201  Q
    ||||||||||||||||||||| | ||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  15505701 aagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctgtc 15505631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 19656105 - 19656220
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||| || |||||| | ||||||  ||||| |||||||||| ||| |||||| |||||||| ||||||||||||  ||| ||||| ||| ||||||    
T  19656105 aaagggcagcccggtgcattaaagctcttgcatatgcagggtccaagaaagggtcctaccatttt-ggtgtattgtacatagcgttaccatgttttttac 19656203  T
Q  208 acaagaggctgtttcca 224  Q
    |||||||||||||||||    
T  19656204 acaagaggctgtttcca 19656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 34148983 - 34149076
Alignment:
Q  131 gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccagg 226  Q
    ||||| ||||| |||||||||||||||||||| ||||||||  ||| | ||||||||| ||||||||| | || ||||||||||||||||||||||    
T  34148983 gctcctgcatatgcagggtccaggaaggggtctcaccattt--ggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttccagg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 22327197 - 22327130
Alignment:
Q  170 ttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccg 237  Q
    |||||||| || |||| |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  22327197 ttttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccg 22327130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 50760288 - 50760355
Alignment:
Q  172 ttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||| ||||||||||||||| || || ||||||||||||||||| |||||||||||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtg 50760355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 4587568 - 4587626
Alignment:
Q  113 gcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 33223093 - 33223013
Alignment:
Q  157 ggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||| || |||||    
T  33223093 ggggtcccaccatttt-ggtgtattgtacgcaacctttccctgt-ttttacacaagaggctgtttccatgacttaaatccgtg 33223013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 43768297 - 43768207
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 200  Q
    |||||||| || |||||| | ||||||||| ||||||||||||  ||||||||||||||||   ||||||||||||| |||||||||||||||    
T  43768297 aaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca--attggtgtattgtaggcagccttaccctgt 43768207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 23371268 - 23371153
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| ||||| || |||||||||||||  ||||||||||||| |||||  |||||||||||| || |||| ||| || |||||| |||| ||||||    
T  23371268 ggtgcactaaagctaccacatacgcagggtct-ggaaggggtcccagcattt--ggtgtattgtacacaaccttgccc-gttttttacccaagtggctgt 23371173  T
Q  220 ttccaggacttgaacccgtg 239  Q
    ||| ||||||||||||||||    
T  23371172 ttctaggacttgaacccgtg 23371153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 5549677 - 5549580
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt-ggtgtattgtacgcagccttaccctgtctttt 205  Q
    ||||||||||||| || ||| ||||||| ||||| |||| |||||| ||||||||||| ||||||| |||||||||| |||||| ||||||||| ||||    
T  5549677 aaagggcaacctg-tgtactaaagctcctgcataggcagagtccagaaaggggtcccatcattttttggtgtattgtgcgcagctttaccctgtttttt 5549580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 24564441 - 24564379
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaa 233  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||    
T  24564441 tttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaa 24564379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 233
Target Start/End: Complemental strand, 35019375 - 35019265
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 219  Q
    |||||||| |||||| |||||||||||||||  ||| |||||||||||| ||  ||||||||||| |||||||||  |||  ||||| |||||||| |||    
T  35019375 ggtgcactaaagctctcgcatacgcagggtctggga-ggggtcccaccaatt--ggtgtattgtatgcagccttatactgatttttatacaagaggttgt 35019279  T
Q  220 ttccaggacttgaa 233  Q
    || |||||||||||    
T  35019278 ttacaggacttgaa 35019265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 30682949 - 30682845
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |  ||||| |||| ||  |||||| ||| |||||||||||||||| ||| |||||     
T  30682949 aagctcccgcatacgcacggtccgggaaggggtcccaccatttgt--tgtat-gtacacaatcttaccttgt-ttttacacaagaggctattttcaggat 30682854  T
Q  229 ttgaacccg 237  Q
    |||||||||    
T  30682853 ttgaacccg 30682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 4430087 - 4430155
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||| |||||||||| ||||||||||||  |||||| || ||||| ||||||||    
T  4430087 tttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtg 4430155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 31272397 - 31272499
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttcc 223  Q
    |||| ||||||||||||||||||||||| ||||     ||||||||||  | |||  |||||||||||||||| ||| |||||||||||||| |||||||    
T  31272397 cactaaagctcccgcatacgcagggtcc-ggaa-----cccaccattt--gatgtgctgtacgcagccttaccatgt-ttttacacaagaggttgtttcc 31272487  T
Q  224 aggacttgaacc 235  Q
    ||||||||||||    
T  31272488 aggacttgaacc 31272499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 52910379 - 52910250
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat----ttttggtgtattgtacgcagccttaccctg-tctttt 205  Q
    ||||| ||||||||||| ||| |||| |||||| ||| |||||||||||||||||||||     || |||||||||||| ||| | ||||||| | ||||    
T  52910379 gggcagcctggtgcactaaagttcccacatacggaggttccaggaaggggtcccaccataaccattaggtgtattgtacacagtcctaccctgttttttt 52910280  T
Q  206 acacaagaggctgtttccaggacttgaacc 235  Q
    ||  ||||||||||||||| || |||||||    
T  52910279 acctaagaggctgtttccaagagttgaacc 52910250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 4430008 - 4430080
Alignment:
Q  117 cctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcc 191  Q
    ||||| ||||| |||||||||||||| |||| ||||| ||||||| ||||||  |||||||||||||||||||||    
T  4430008 cctggagcactaaagctcccgcatacacaggatccagaaaggggttccacca--tttggtgtattgtacgcagcc 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 6358264 - 6358190
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 199  Q
    |||| ||| ||| ||||||||||||||  |||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccacca-ttttggtgttttgtacgcagctttaccctg 6358190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 25290285 - 25290192
Alignment:
Q  153 ggaaggggtcccaccatttttggtgtattgtacgca-----gccttaccctgtcttttacacaagaggc--tgtttccaggacttgaacccgtg 239  Q
    ||||||||||| | ||||||||||||||||||| ||     |||||||||||| |||||||||||||||  |||||||| ||||||||| ||||    
T  25290285 ggaaggggtcctatcatttttggtgtattgtacacaaccttgccttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtg 25290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 7074664 - 7074588
Alignment:
Q  119 tggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttacc 196  Q
    ||||||||| ||||||||| ||| |||||||| || ||| |||||||| ||||| |||||||||||||||||| ||||    
T  7074664 tggtgcactaaagctcccggatatgcagggtctagaaagaggtcccacaatttt-ggtgtattgtacgcagccatacc 7074588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 43207640 - 43207528
Alignment:
Q  122 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 221  Q
    |||||| |||||| |||||||  ||||||  ||||| |||||||||| ||| ||||||||||| || | |||||||||| ||| ||| |||||| |||||    
T  43207640 tgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaattt-ggtgtattgtatgccgtcttaccctgtttttcacataagaggttgttt 43207542  T
Q  222 ccaggacttgaacc 235  Q
    ||| ||||| ||||    
T  43207541 ccaagacttaaacc 43207528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 20169110 - 20169207
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||||||| ||||||||| |||||| ||||||||    |||| ||||||||| ||| |||||| | | |||||||||||||| ||||| ||||||    
T  20169110 aagctcccgcatatgcagggtccgggaaggagtcccacc--gattggggtattgtacacagtcttacctttttttttacacaagagggtgttttcaggac 20169207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 21723811 - 21723728
Alignment:
Q  138 catacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttcca 224  Q
    |||||||||||||| ||||  ||| | |||||||  |||||||||||| |||||||||||| | ||||| |||||||||||||||||    
T  21723811 catacgcagggtccgggaaaaggttctaccattt--ggtgtattgtactcagccttaccctat-ttttatacaagaggctgtttcca 21723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 30555261 - 30555210
Alignment:
Q  120 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 171  Q
    |||||||| |||||| ||||||||||||||||  ||||||||||||||||||    
T  30555261 ggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 33594144 - 33594191
Alignment:
Q  121 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 168  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 18335309 - 18335408
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    ||||||||| |||| || |||| ||||| |||||||| |||||  | ||||||||||||| | |||||||   ||||| ||||||| |||||||||||||    
T  18335309 aagctcccgtatacacatggtctaggaaagggtcccatcattt--gatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggac 18335406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 21910673 - 21910754
Alignment:
Q  131 gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggc 216  Q
    ||||||||| ||| ||||| | |||||||||||||||||||  ||||||||||||||| ||||||||| | ||||||| |||||||    
T  21910673 gctcccgca-acgtagggttcgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctat-ttttacataagaggc 21910754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 28894561 - 28894642
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcctta 194  Q
    ||||| ||||||||||| |||||| |||||| |||||||| ||||||||||   ||||  |||| ||||||||||||| |||||    
T  28894561 gggcagcctggtgcactaaagctctcgcatatgcagggtctaggaaggggttttacca--tttgatgtattgtacgcaacctta 28894642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 34679280 - 34679336
Alignment:
Q  171 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccagga 227  Q
    |||| ||||| |||||||| |||||||||| |||||||||||||| |||||| ||||    
T  34679280 tttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctagga 34679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 16120874 - 16120819
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcc 163  Q
    |||||||| ||||||||| | ||||||||||||| |||||| || |||||||||||    
T  16120874 aaagggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggggtcc 16120819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 4249453 - 4249520
Alignment:
Q  118 ctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgc 187  Q
    |||||||| | |||||||||||||| || ||| | ||||||| ||||||||  |||||||||||||||||    
T  4249453 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccacca--tttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 4249777 - 4249844
Alignment:
Q  118 ctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgc 187  Q
    |||||||| | |||||||||||||| || ||| | ||||||| ||||||||  |||||||||||||||||    
T  4249777 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccacca--tttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 4250101 - 4250168
Alignment:
Q  118 ctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgc 187  Q
    |||||||| | |||||||||||||| || ||| | ||||||| ||||||||  |||||||||||||||||    
T  4250101 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccacca--tttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 14987989 - 14988043
Alignment:
Q  180 ttgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaac 234  Q
    ||||||||||||||| ||||| ||||||| ||||  |||||| ||||||||||||    
T  14987989 ttgtacgcagccttatcctgtattttacataagatactgttttcaggacttgaac 14988043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 2435985 - 2436022
Alignment:
Q  202 ttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  2435985 ttttacacaggaggttgtttccaggacttgaacccgtg 2436022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 44745854 - 44745900
Alignment:
Q  179 attgtacgcagccttaccctgtcttttacacaagaggctgtttccagga 227  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  44745854 attgtacgcagctttaccttgt--tttacacaagaggctgtttccagga 44745900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 46859173 - 46859129
Alignment:
Q  160 gtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  46859173 gtcccaccatttt-ggtgtattgtacgcagtcttaccctgtttttt 46859129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 4251455 - 4251507
Alignment:
Q  183 tacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacc 235  Q
    |||||| ||||||||||| ||||||| || ||| |||||| ||||||||||||    
T  4251455 tacgcatccttaccctgttttttacataaaaggttgtttctaggacttgaacc 4251507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 20982773 - 20982838
Alignment:
Q  131 gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 198  Q
    |||||||||||||||||||||  |||| | ||||||||  || ||||||||||  |||||||||||||    
T  20982773 gctcccgcatacgcagggtccgagaagagatcccacca--ttaggtgtattgttggcagccttaccct 20982838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 37299633 - 37299573
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacc 167  Q
    ||||||||| ||| ||||||| |||||| ||||| | || ||||| |||||||||||||||    
T  37299633 taaagggcagcctagtgcactaaagctctcgcatgcacatggtccgggaaggggtcccacc 37299573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 41440618 - 41440666
Alignment:
Q  124 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 172  Q
    |||| |||||||||||||| ||| ||| |||||||||| ||||||||||    
T  41440618 cactaaagctcccgcatacacagagtctaggaaggggttccaccatttt 41440666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 107 - 239
Target Start/End: Complemental strand, 59115 - 58983
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||||||||||| | |||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  59115 taaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttta 59016  T
Q  207 cacaagaggctgtttccaggacttgaacccgtg 239  Q
     ||||||||||||||||||||||||||||||||    
T  59015 tacaagaggctgtttccaggacttgaacccgtg 58983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 89; Significance: 7e-43; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 46966 - 46837
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||| | ||||||    
T  46966 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctattttttac 46869  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| ||||||||| |||||||||||||    
T  46868 acaagaggttgtttccagcacttgaacccgtg 46837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 24772 - 24882
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| | |||||| ||||||||||||||||||||| | ||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  24772 aaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtgttgtacgcagccttaccctgttttttac 24869  T
Q  208 acaagaggctgtt 220  Q
    |||||||||||||    
T  24870 acaagaggctgtt 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 232
Target Start/End: Complemental strand, 43793 - 43672
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtcc-aggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    ||||||||||   |||||||  |||||||||||| ||||||||| || |||||||||||||||||  ||||||||||||||||||||||| ||  |||||    
T  43793 aaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccattt--ggtgtattgtacgcagccttaccttg--tttta 43698  T
Q  207 cacaagaggctgtttccaggacttga 232  Q
    ||||||| ||||||||||| ||||||    
T  43697 cacaagacgctgtttccagaacttga 43672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 46710 - 46796
Alignment:
Q  111 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 198  Q
    ||||| |||| |||| | ||||||||||||||||||||||  |||||||||||||||| ||||||| ||||||| ||| |||||||||    
T  46710 gggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccacca-ttttggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 30712 - 30589
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||  ||||||    
T  30712 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccctaccctg--ttttac 30617  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
    ||||||||||||||||||||||||||||    
T  30616 acaagaggctgtttccaggacttgaacc 30589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 11267 - 11137
Alignment:
Q  105 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttt 204  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| |||||| |||||||||  |||||||||||||| |||||||||  || | |||    
T  11267 agtaaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccacca--tttggtgtattgtaagcagcctta--ctttgttt 11172  T
Q  205 tacacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||||||||||||    
T  11171 tacacaagaggctgtttccaggacttgaacccgtg 11137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 48634 - 48758
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||||||    
T  48634 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg--ttttac 48729  T
Q  208 acaagaggctgtttccaggacttgaaccc 236  Q
    |||||||||||||||||  ||||||||||    
T  48730 acaagaggctgtttccaccacttgaaccc 48758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 13024 - 13148
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    ||||||||||| |||||||| |||| |||||||||||||||||  ||||||||||||||||  || ||||||||||||||||||||||| ||| ||||||    
T  13024 aaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccacca--ttcggtgtattgtacgcagccttaccttgt-ttttac 13120  T
Q  208 acaagaggctgtttccaggacttgaacc 235  Q
     |||||||||||||||||||||||||||    
T  13121 gcaagaggctgtttccaggacttgaacc 13148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 239
Target Start/End: Original strand, 10052 - 10177
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    ||||||||| ||||||||| |||||| ||||| ||||||||| ||||||||||||||  | ||||||||||||||||||| ||||| |||  ||||||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccac--tatttggtgtattgtacgcagtcttactctg--ttttacac 10147  T
Q  210 aagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||    
T  10148 aagaggctgtttccaggacttgaacccgtg 10177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 239
Target Start/End: Original strand, 20380 - 20505
Alignment:
Q  110 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacac 209  Q
    ||||||||| ||||||||| |||||| ||||| ||||||||| ||||||||||||||  | ||||||||||||||||||| ||||| |||  ||||||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccac--tatttggtgtattgtacgcagtcttactctg--ttttacac 20475  T
Q  210 aagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||||||||||||||||||||||||||    
T  20476 aagaggctgtttccaggacttgaacccgtg 20505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 72867 - 72997
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| | ||||  |||||||||||||| ||||||||||| ||| ||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactacca--tttggtgtattgtaggcagccttaccgtgttttttac 72964  T
Q  208 acaagaggc-tgtttccaggacttgaacccgtg 239  Q
    ||||||| | |||||| ||||||||||||||||    
T  72965 acaagagacttgtttctaggacttgaacccgtg 72997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 10945 - 10816
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 207  Q
    |||| ||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||| ||||||    
T  10945 aaagagcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattggacgcagccctaccctgttttttac 10848  T
Q  208 acaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||| ||||| |||  ||||||||||||    
T  10847 acaagaggttgttttcagaccttgaacccgtg 10816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 1586 - 1711
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttta 206  Q
    |||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||  |||||||||||||| ||||||||| ||||  |||||    
T  1586 taaaaggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatca--tttggtgtattgtatgcagccttatcctg--tttta 1681  T
Q  207 cacaagaggctgtttccaggacttgaaccc 236  Q
    ||||||||| ||||| ||||||||||||||    
T  1682 cacaagaggttgttttcaggacttgaaccc 1711  T

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Target: scaffold0254 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 4258 - 4163
Alignment:
Q  145 agggtccaggaaggggtcccaccattt-ttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 239  Q
    ||||||| |||||||||||||||| || ||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtg 4163  T

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Target: scaffold0954 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 3681 - 3560
Alignment:
Q  106 gtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt 205  Q
    |||||||| |||  |||||||| ||||| ||||||||||||||| | ||||||||||||| ||||   |||||||| |||||||||||||| | | ||||    
T  3681 gtaaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattc--ggtgtattatacgcagccttaccttatatttt 3584  T
Q  206 acacaagaggctgtttccaggact 229  Q
    |||||||||||| |||||||||||    
T  3583 acacaagaggctctttccaggact 3560  T

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Target: scaffold0180 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 24133 - 24220
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccc 197  Q
    ||||||||| | ||||||||  |||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  24133 aaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0036 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 35048 - 35147
Alignment:
Q  139 atacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtctt-ttacacaagaggctgtttccaggacttgaacccg 237  Q
    ||||||| | |||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||   ||||||||| |||||| |||||||||||||||    
T  35048 atacgcaagatccaggaaagggtcccaccattt--ggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccg 35145  T

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Target: scaffold0167 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 23713 - 23606
Alignment:
Q  129 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 228  Q
    |||||||| ||||| || ||||  |||||||||||||||||||  | |  |||||||||||||| ||||||| |||||||||||||| ||||| || |||    
T  23713 aagctcccacatactcaaggtctgggaaggggtcccaccattt--gctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagac 23616  T
Q  229 ttgaacccgt 238  Q
    ||||||||||    
T  23615 ttgaacccgt 23606  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 226456 - 226535
Alignment:
Q  159 ggtcccaccatttttggtgtattgtacgcagccttaccctgtctttt-acacaagaggctgtttccaggacttgaacccgtg 239  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||| | ||||||||||||||| |||||||||| |||||    
T  226456 ggtcccaccattt--gatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtg 226535  T

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Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 24783 - 24696
Alignment:
Q  108 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccc 197  Q
    ||||||||| | |||||||||||||||||| ||||||||||||  | ||||||  ||||  | ||||||||||| ||||||| |||||||    
T  24783 aaagggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccac--tatttggtgtattatacgcagtcttaccc 24696  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 58629 - 58691
Alignment:
Q  107 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 170  Q
    ||||||||| |||||||||| || |||||||||||| ||||||||  ||||||||| |||||||    
T  58629 taaagggcagcctggtgcacaga-gctcccgcatacacagggtccgagaaggggtctcaccatt 58691  T

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