View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5429_low_8 (Length: 237)
Name: NF5429_low_8
Description: NF5429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5429_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 7092576 - 7092777
Alignment:
| Q |
20 |
aggggattcataagccaaatatgtttagcttaatttagaagataatgtgatagttgtgtgtcaaagtcatgatttctaatactataatgtttgaagcaat |
119 |
Q |
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| T |
7092576 |
aggggattcataagccaaatatgtttagcttaatttagaagataatgtgatagttgtgtgtcaaagtcatgattcctaatactataatgtttgaagcaat |
7092675 |
T |
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| Q |
120 |
taacaaccctagcacacgtgccatgccatatctctatccccaccacttcattattgttattttctaggttgggatttggtggaaactcaatgcatttcaa |
219 |
Q |
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| T |
7092676 |
taacaaccctagcacacgtgccatgccatatctctatccccaccacttcattattgttattttctaggttgggatttggtggaaactcaatgcatttcaa |
7092775 |
T |
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| Q |
220 |
tg |
221 |
Q |
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| T |
7092776 |
tg |
7092777 |
T |
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