View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5431_high_3 (Length: 225)

Name: NF5431_high_3
Description: NF5431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5431_high_3
NF5431_high_3
[»] chr7 (17 HSPs)
chr7 (1-165)||(4881037-4881201)
chr7 (166-225)||(40656180-40656239)
chr7 (166-225)||(34708672-34708730)
chr7 (172-225)||(9234319-9234372)
chr7 (170-225)||(19306715-19306768)
chr7 (166-225)||(29628456-29628513)
chr7 (166-225)||(1869814-1869872)
chr7 (167-223)||(33512797-33512851)
chr7 (165-225)||(48612515-48612573)
chr7 (170-225)||(3497589-3497642)
chr7 (170-225)||(4887585-4887638)
chr7 (165-225)||(23789485-23789544)
chr7 (170-225)||(27396386-27396439)
chr7 (170-225)||(29151586-29151639)
chr7 (165-225)||(33228697-33228756)
chr7 (161-225)||(40013257-40013320)
chr7 (193-225)||(40873210-40873242)
[»] chr3 (20 HSPs)
chr3 (162-225)||(1242212-1242273)
chr3 (165-225)||(11312588-11312646)
chr3 (170-225)||(9493500-9493554)
chr3 (170-225)||(11029666-11029720)
chr3 (170-225)||(28171051-28171105)
chr3 (170-225)||(40840171-40840225)
chr3 (163-219)||(3917762-3917816)
chr3 (165-225)||(4232249-4232307)
chr3 (155-218)||(14868934-14868994)
chr3 (170-218)||(24910367-24910413)
chr3 (170-225)||(4833181-4833234)
chr3 (170-225)||(6583307-6583360)
chr3 (170-225)||(8381082-8381135)
chr3 (165-225)||(9583495-9583554)
chr3 (172-220)||(11751216-11751263)
chr3 (170-225)||(13525172-13525225)
chr3 (170-225)||(24250728-24250781)
chr3 (170-225)||(28266529-28266582)
chr3 (170-225)||(38127914-38127967)
chr3 (170-225)||(46838799-46838852)
[»] chr5 (24 HSPs)
chr5 (166-225)||(36790387-36790445)
chr5 (170-225)||(9902573-9902626)
chr5 (165-225)||(23074716-23074775)
chr5 (166-225)||(25328376-25328433)
chr5 (170-220)||(10393579-10393627)
chr5 (163-225)||(17869196-17869256)
chr5 (170-225)||(21728663-21728717)
chr5 (164-225)||(1244253-1244312)
chr5 (171-225)||(28489186-28489239)
chr5 (165-225)||(18473912-18473970)
chr5 (165-225)||(23311245-23311303)
chr5 (165-225)||(37940916-37940974)
chr5 (165-225)||(41562456-41562514)
chr5 (170-225)||(1650294-1650347)
chr5 (170-225)||(2103029-2103082)
chr5 (170-225)||(6041916-6041969)
chr5 (170-225)||(6672244-6672297)
chr5 (170-225)||(28143304-28143357)
chr5 (170-225)||(29119609-29119662)
chr5 (170-225)||(36136934-36136987)
chr5 (170-225)||(36569282-36569335)
chr5 (170-225)||(36726992-36727045)
chr5 (170-225)||(38682931-38682984)
chr5 (170-225)||(42068544-42068597)
[»] chr4 (16 HSPs)
chr4 (165-225)||(1033521-1033579)
chr4 (165-225)||(54907964-54908022)
chr4 (166-225)||(47462108-47462165)
chr4 (157-219)||(3037227-3037287)
chr4 (175-217)||(38882724-38882766)
chr4 (165-225)||(12821163-12821221)
chr4 (172-213)||(33840624-33840664)
chr4 (165-225)||(36526213-36526271)
chr4 (163-219)||(42154216-42154270)
chr4 (163-218)||(23974721-23974774)
chr4 (170-225)||(30044656-30044709)
chr4 (170-225)||(35828277-35828330)
chr4 (170-225)||(42856566-42856619)
chr4 (170-225)||(49535888-49535941)
chr4 (170-225)||(49882781-49882834)
chr4 (165-225)||(55853386-55853445)
[»] chr1 (14 HSPs)
chr1 (165-225)||(35010661-35010719)
chr1 (170-225)||(270393-270447)
chr1 (165-219)||(13555802-13555854)
chr1 (166-225)||(39606403-39606461)
chr1 (164-225)||(43676096-43676155)
chr1 (170-225)||(10635492-10635545)
chr1 (170-225)||(19338250-19338303)
chr1 (170-225)||(28999377-28999430)
chr1 (170-225)||(29005093-29005146)
chr1 (166-225)||(32880651-32880708)
chr1 (170-225)||(40958646-40958699)
chr1 (170-225)||(40962774-40962827)
chr1 (170-225)||(42631057-42631110)
chr1 (170-225)||(48391959-48392012)
[»] chr8 (13 HSPs)
chr8 (165-225)||(16501646-16501705)
chr8 (166-219)||(44814862-44814913)
chr8 (161-225)||(19649570-19649632)
chr8 (165-225)||(41278599-41278657)
chr8 (170-225)||(2733619-2733672)
chr8 (164-219)||(6317297-6317350)
chr8 (166-225)||(10096611-10096668)
chr8 (170-225)||(11100360-11100413)
chr8 (165-225)||(25063337-25063396)
chr8 (170-225)||(25199049-25199102)
chr8 (170-225)||(26690697-26690750)
chr8 (162-225)||(34711627-34711688)
chr8 (170-225)||(37295129-37295182)
[»] chr2 (8 HSPs)
chr2 (162-225)||(20251557-20251618)
chr2 (166-225)||(24381244-24381301)
chr2 (170-225)||(34481743-34481796)
chr2 (170-225)||(36754813-36754866)
chr2 (172-225)||(7975086-7975137)
chr2 (165-225)||(32023250-32023308)
chr2 (163-219)||(42160335-42160389)
chr2 (170-225)||(38490472-38490525)
[»] scaffold0457 (1 HSPs)
scaffold0457 (165-219)||(6777-6829)
[»] chr6 (9 HSPs)
chr6 (170-225)||(16496724-16496778)
chr6 (170-219)||(32107913-32107960)
chr6 (170-225)||(5603519-5603572)
chr6 (170-225)||(8448214-8448267)
chr6 (170-225)||(8457018-8457071)
chr6 (170-225)||(13507382-13507435)
chr6 (170-225)||(16244414-16244467)
chr6 (170-225)||(18861839-18861892)
chr6 (170-225)||(31205255-31205308)
[»] scaffold0778 (1 HSPs)
scaffold0778 (166-225)||(817-874)
[»] scaffold0432 (1 HSPs)
scaffold0432 (170-225)||(9370-9423)
[»] scaffold0402 (1 HSPs)
scaffold0402 (170-225)||(1313-1366)
[»] scaffold0287 (1 HSPs)
scaffold0287 (170-225)||(1130-1183)
[»] scaffold0041 (1 HSPs)
scaffold0041 (193-225)||(93040-93072)


Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 4881037 - 4881201
Alignment:
Q  1 tcatcacatccacacaatagctctccattgagagtgtccacagcttgaaatgacccacctccttcactcctctgcattataacaaccaaaattaaaataa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4881037 tcatcacatccacacaatagctctccattgagagtgtccacagcttgaaatgaccctcctccttcactcctctgcattataacaaccaaaattaaaataa 4881136  T
Q  101 tatatggattttgattccaaatttagaagaaatcactaataagctagataaaaaatttggttaaa 165  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4881137 tataaggattttgattccaaatttagaagaaatcactaataagctagataaaaattttggttaaa 4881201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 40656239 - 40656180
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||| |||||| ||||    
T  40656239 atctagaagtcctagctcaactggcaaaaaatgccgatattgttaggccggatgccatga 40656180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 34708672 - 34708730
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| || ||||||||||| ||| ||||||||||||| ||||    
T  34708672 atctagaagtcctagctcaactggc-aaaaatgccgatattgttaggctggatgccatga 34708730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 9234372 - 9234319
Alignment:
Q  172 aagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||| | |||||||||||||||| |||||| ||| |||||||    
T  9234372 aagtcctagctcaactggaaaaaaatgccgaaattgttaggccggacgctatga 9234319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 19306715 - 19306768
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  ||||||||||||||||| |||||| ||||    
T  19306715 agaagtcctagctcaactggcaaaa--tgccgaaattattaggccggatgccatga 19306768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 29628513 - 29628456
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||  |||||| ||||    
T  29628513 atctagaagtcctagctcaactgg--aaaaatgccgaaattattaggtcggatgccatga 29628456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 1869814 - 1869872
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| || ||||||||||| ||| |||||| |||||| ||||    
T  1869814 atctagaagtcctagctcaactggc-aaaaatgccgatattgttaggccggatgccatga 1869872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 33512797 - 33512851
Alignment:
Q  167 tctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctat 223  Q
    |||| |||||||||||||||| ||||||  |||||||||| |||||| |||||||||    
T  33512797 tctataagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgctat 33512851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 48612515 - 48612573
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  48612515 aatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 48612573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 3497642 - 3497589
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  3497642 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 3497589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 4887638 - 4887585
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  4887638 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 4887585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23789544 - 23789485
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||| |||||| || ||||||||||| ||| |||||| |||||| ||||    
T  23789544 aatctagaagtcctagttcaactggc-aaaaatgccgatattgttaggccggatgccatga 23789485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 27396439 - 27396386
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  27396439 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 27396386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 29151586 - 29151639
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  ||||||| |||||| |||||| |||||||||||    
T  29151586 agaagtcctagctcaactggc--aaaatgctgaaattgttaggccggatgctatga 29151639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 33228697 - 33228756
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| || ||||||| ||||||| |||||| |||||| ||||    
T  33228697 aatccagaagtcctagctcaactggc-aaaaatgtcgaaattgttaggccggatgccatga 33228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 40013257 - 40013320
Alignment:
Q  161 ttaaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| ||| ||||||||||||||||||  ||||| ||||||||||| |||||| |||||| ||||    
T  40013257 ttaatatccagaagtcctagctcaactgacaaaa-atgccgaaattgttaggccggatgccatga 40013320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 40873210 - 40873242
Alignment:
Q  193 aaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||||||||| ||||    
T  40873210 aaaatgccgaaattattaggctggatgccatga 40873242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 1242212 - 1242273
Alignment:
Q  162 taaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||| |||||| ||||    
T  1242212 taaaatctagaagtcctagctcaactggc--aaaatgccgaaattattaggccggatgccatga 1242273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 11312588 - 11312646
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||||||||| ||  |||||||||||||| |||||| |||||||||||    
T  11312588 aatctagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgctatga 11312646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 9493500 - 9493554
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||| | |||||| ||||||| ||||||||||||| ||||    
T  9493500 agaagtcctagctcaacttg-ataaaatgtcgaaattgttaggctggatgccatga 9493554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 11029666 - 11029720
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| || ||||||| ||||||| ||||||||||||| ||||    
T  11029666 agaagtcctagctcaactggc-aaaaatgtcgaaattgttaggctggatgccatga 11029720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 28171105 - 28171051
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||| |||||||||| |||||| |||||| ||||    
T  28171105 agaagtcctagctcaactggcaaaaa-tgccgaaattgttaggccggatgccatga 28171051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 40840171 - 40840225
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| || ||||||||||||||| |||||| |||||| ||||    
T  40840171 agaagtcctagctcaactggc-aaaaatgccgaaattgttaggccggatgccatga 40840225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 3917762 - 3917816
Alignment:
Q  163 aaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    |||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||    
T  3917762 aaaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatg 3917816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 4232307 - 4232249
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  4232307 aatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 4232249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 14868994 - 14868934
Alignment:
Q  155 atttggttaaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggat 218  Q
    |||| |||| |||| |||||||||||||||||| ||   ||||||||||||| |||||||||||    
T  14868994 attttgttagaatccagaagtcctagctcaactggc---aaatgccgaaattgttaggctggat 14868934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 24910413 - 24910367
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggat 218  Q
    |||||||||||||||||| ||||||  |||||||||| |||||||||||    
T  24910413 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggctggat 24910367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 4833234 - 4833181
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  4833234 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 4833181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 6583360 - 6583307
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  6583360 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 6583307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 8381082 - 8381135
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  8381082 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 8381135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 9583554 - 9583495
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| ||||| | |||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  9583554 aatccagaagccttagctcaactggcaaaaa-tgccgaaattgttaggccggatgctatga 9583495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 11751216 - 11751263
Alignment:
Q  172 aagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgc 220  Q
    |||||||||||||||| |||||| ||||||||||| |||||| ||||||    
T  11751216 aagtcctagctcaactggcaaaa-atgccgaaattgttaggccggatgc 11751263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 13525172 - 13525225
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  13525172 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 13525225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 24250728 - 24250781
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||| | ||||||  |||||||||| |||||| |||||||||||    
T  24250728 agaagtcctagctcaattggcaaaa--tgccgaaattgttaggccggatgctatga 24250781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 28266529 - 28266582
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||||  |||||  |||||||||| ||||||||||||| ||||    
T  28266529 agaagtcctagctcaactgacaaaa--tgccgaaattgttaggctggatgccatga 28266582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 38127967 - 38127914
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  || ||||||| |||||| |||||||||||    
T  38127967 agaagtcctagctcaactggcaaaa--tgtcgaaattgttaggccggatgctatga 38127914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 46838852 - 46838799
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| |  ||||||||||||||| |||||| |||||| ||||    
T  46838852 agaagtcctagctcaactgg--aaaaatgccgaaattgttaggccggatgccatga 46838799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 36790445 - 36790387
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||    
T  36790445 atctagaagtcctagcttaactggcaaaaa-tgccgaaattattaggccggatgctatga 36790387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 9902626 - 9902573
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||||||||    
T  9902626 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgctatga 9902573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23074775 - 23074716
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| || ||||||||||||||| |||||| |||||| ||||    
T  23074775 aatccagaagtcctagctcaactggc-aaaaatgccgaaattgttaggccggatgccatga 23074716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 25328433 - 25328376
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  25328433 atctagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 25328376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 10393627 - 10393579
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgc 220  Q
    |||||||||||||||||| |  |||||||||||||||||||||| ||||||    
T  10393627 agaagtcctagctcaactgg--aaaaatgccgaaattattaggccggatgc 10393579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 17869256 - 17869196
Alignment:
Q  163 aaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  17869256 aaaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 17869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 21728663 - 21728717
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| || ||||||||||||||| |||||| |||||| ||||    
T  21728663 agaagtcctagctcaactggc-aaaaatgccgaaattgttaggccggatgccatga 21728717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 1244312 - 1244253
Alignment:
Q  164 aaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  1244312 aaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 1244253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 28489186 - 28489239
Alignment:
Q  171 gaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||| ||||||  ||||| |||||||||||||||||| |||||||||||    
T  28489186 gaagtcctagttcaactgacaaaa-atgccgaaattattaggccggatgctatga 28489239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 18473912 - 18473970
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  18473912 aatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 18473970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23311303 - 23311245
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  23311303 aatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 23311245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 37940916 - 37940974
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||||||||| ||  |||||| ||||||| |||||| |||||| ||||    
T  37940916 aatctagaagtcctagctcaactggc--aaaatgtcgaaattgttaggccggatgccatga 37940974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 41562456 - 41562514
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  41562456 aatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 41562514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 1650294 - 1650347
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||| |||  |||||||||||||| |||||| |||||| ||||    
T  1650294 agaagtcctagctcaacctgc--aaaatgccgaaattgttaggccggatgccatga 1650347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 2103029 - 2103082
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  2103029 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 2103082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 6041969 - 6041916
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| | ||||  || |||||||||||||| |||||||||||    
T  6041969 agaagtcctagctcaactggtaaaa--tgtcgaaattattaggccggatgctatga 6041916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 6672244 - 6672297
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  6672244 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 6672297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 28143357 - 28143304
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  28143357 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 28143304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 29119609 - 29119662
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  29119609 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 29119662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 36136987 - 36136934
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| | |||||||||    
T  36136987 agaagtcctagctcaactagcaaaa--tgccgaaattgttaggccgaatgctatga 36136934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 36569282 - 36569335
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  36569282 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 36569335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 36726992 - 36727045
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  36726992 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 36727045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 38682931 - 38682984
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||| ||||| ||||||||||||| ||||    
T  38682931 agaagtcctagctcaactggc--aaaatgccaaaattgttaggctggatgccatga 38682984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 42068544 - 42068597
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||| || ||||||  |||||||||| ||||||||||||| ||||    
T  42068544 agaagtcctagctcagctggcaaaa--tgccgaaattgttaggctggatgccatga 42068597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 1033579 - 1033521
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  1033579 aatctagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 1033521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 54908022 - 54907964
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  54908022 aatctagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 54907964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 47462165 - 47462108
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  47462165 atctagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 47462108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 3037227 - 3037287
Alignment:
Q  157 ttggttaaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    ||||| |||||| |||| |||||||||||||  |||||  |||||||||||||||||||||||    
T  3037227 ttggtgaaaatccagaaatcctagctcaactgtcaaaa--tgccgaaattattaggctggatg 3037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 38882724 - 38882766
Alignment:
Q  175 tcctagctcaacttgcaaaaaatgccgaaattattaggctgga 217  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||    
T  38882724 tcctagctcaactggcaaaaaatgtcgaaattgttaggctgga 38882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 12821163 - 12821221
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  12821163 aatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 12821221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 33840624 - 33840664
Alignment:
Q  172 aagtcctagctcaacttgcaaaaaatgccgaaattattaggc 213  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  33840624 aagtcctagctcaactagcaaaa-atgccgaaattattaggc 33840664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 36526271 - 36526213
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| |||||||  ||||||||| |||||| |||||| ||||    
T  36526271 aatccagaagtcctagctcaactagcaaaaa--gccgaaattgttaggccggatgccatga 36526213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 42154270 - 42154216
Alignment:
Q  163 aaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    |||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||    
T  42154270 aaaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatg 42154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 23974774 - 23974721
Alignment:
Q  163 aaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggat 218  Q
    |||||| |||||||||||||||||| ||  |||||||||||||| |||||| ||||    
T  23974774 aaaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggat 23974721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 30044709 - 30044656
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  30044709 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 30044656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 35828277 - 35828330
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  35828277 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 35828330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 42856566 - 42856619
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  42856566 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 42856619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 49535888 - 49535941
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  49535888 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 49535941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 49882834 - 49882781
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  49882834 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 49882781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 55853445 - 55853386
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| || ||||||||| ||||| ||||| ||||||| ||||    
T  55853445 aatccagaagtcctagctcaactggc-aaaaatgccaaaattgttaggttggatgccatga 55853386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 35010719 - 35010661
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  35010719 aatccagaagtcctagctcaactagcaaaa--tgccgaaattgttaggctggatgccatga 35010661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 270447 - 270393
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||| |||||||||| |||||| |||||| ||||    
T  270447 agaagtcctagctcaactggcaaaaa-tgccgaaattgttaggccggatgccatga 270393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 13555854 - 13555802
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  13555854 aatcaagaagtcctagctcaactggcaaaa--tgccgaaattattaggccggatg 13555802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 39606403 - 39606461
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| || ||||||||||| ||| |||||| |||||| ||||    
T  39606403 atctagaagtcctagctcaactggc-aaaaatgccgatattgttaggccggatgccatga 39606461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 43676155 - 43676096
Alignment:
Q  164 aaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  43676155 aaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 43676096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 10635492 - 10635545
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  10635492 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 10635545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 19338303 - 19338250
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  19338303 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 19338250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 28999377 - 28999430
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  28999377 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 28999430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 29005093 - 29005146
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  29005093 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 29005146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 32880708 - 32880651
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||| ||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  32880708 atctagaagtcctaactcaactggcaaaa--tgccgaaattgttaggccggatgccatga 32880651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 40958699 - 40958646
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  40958699 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 40958646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 40962827 - 40962774
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||||  |||||  |||| ||||||||||||||||||| ||||    
T  40962827 agaagtcctagctcaactgacaaaa--tgccaaaattattaggctggatgccatga 40962774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 42631110 - 42631057
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  42631110 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 42631057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 48391959 - 48392012
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  48391959 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 48392012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 16501646 - 16501705
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||||||||||||||| || |||||||| || ||| ||||||||||||| ||||    
T  16501646 aatctagaagtcctagctcaactggc-aaaaatgctgatattgttaggctggatgccatga 16501705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 44814862 - 44814913
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    |||||||||||||||||||||| ||  |||||||||||||| |||||| |||||    
T  44814862 atctagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatg 44814913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 19649632 - 19649570
Alignment:
Q  161 ttaaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||| ||||||| |||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  19649632 ttaaaatccagaagtcatagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 19649570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 41278599 - 41278657
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||| |||||||||| ||  ||||| || ||||| ||||||||||||||||||    
T  41278599 aatctagaagtcttagctcaactggc--aaaataccaaaattgttaggctggatgctatga 41278657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 2733619 - 2733672
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  2733619 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 2733672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 6317297 - 6317350
Alignment:
Q  164 aaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    ||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||    
T  6317297 aaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatg 6317350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 10096611 - 10096668
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| ||  |||||| ||||||| |||||| |||||| ||||    
T  10096611 atctagaagtcctagctcaactggc--aaaatgtcgaaattgttaggccggatgccatga 10096668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 11100413 - 11100360
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| |  ||||||||||||||| |||||| |||||| ||||    
T  11100413 agaagtcctagctcaactgg--aaaaatgccgaaattgttaggccggatgccatga 11100360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 25063337 - 25063396
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| ||||||||||| |||||| |||||| ||||||||||| |||||| |||||| ||||    
T  25063337 aatccagaagtcctagttcaactggcaaaa-atgccgaaattgttaggccggatgccatga 25063396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 25199049 - 25199102
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| | ||||  |||||||||| |||||| |||||||||||    
T  25199049 agaagtcctagctcaactggtaaaa--tgccgaaattgttaggccggatgctatga 25199102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 26690697 - 26690750
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  26690697 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 26690750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 34711688 - 34711627
Alignment:
Q  162 taaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||| |||||||||||||||||| ||  |||||||||||||| |||||  |||||| ||||    
T  34711688 taaaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggtcggatgccatga 34711627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 37295129 - 37295182
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  37295129 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 37295182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 20251618 - 20251557
Alignment:
Q  162 taaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  20251618 taaaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 20251557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 24381244 - 24381301
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| ||  |||||| ||||||| ||||||||||||| ||||    
T  24381244 atctagaagtcctagctcaactagc--aaaatgtcgaaattgttaggctggatgccatga 24381301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 34481796 - 34481743
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  34481796 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggctggatgccatga 34481743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 36754866 - 36754813
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||||||||    
T  36754866 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgctatga 36754813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 7975137 - 7975086
Alignment:
Q  172 aagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||| ||||||  |||||||||| |||||| |||||||||||    
T  7975137 aagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgctatga 7975086  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 32023250 - 32023308
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  32023250 aatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 32023308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 42160389 - 42160335
Alignment:
Q  163 aaaatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    |||||| |||||||||||||||||| ||  |||||||||||||| |||||| |||||    
T  42160389 aaaatccagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatg 42160335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 38490525 - 38490472
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  38490525 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 38490472  T

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Target: scaffold0457 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 6777 - 6829
Alignment:
Q  165 aatctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    ||||||||||||||||||||||| ||  |||||||||||||| |||||| |||||    
T  6777 aatctagaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatg 6829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 16496778 - 16496724
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||| |||||||||| |||||| |||||| ||||    
T  16496778 agaagtcctagctcaactggcaaaaa-tgccgaaattgttaggccggatgccatga 16496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 32107960 - 32107913
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatg 219  Q
    |||||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  32107960 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggctggatg 32107913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 5603572 - 5603519
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||| ||||||||||| |  |||||||||||||||||||||| |||||| ||||    
T  5603572 agaagttctagctcaactgg--aaaaatgccgaaattattaggccggatgccatga 5603519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 8448267 - 8448214
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  8448267 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 8448214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 8457071 - 8457018
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  8457071 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 8457018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 13507435 - 13507382
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| | ||||  |||||||||| ||||||||||||| ||||    
T  13507435 agaagtcctagctcaactgggaaaa--tgccgaaattgttaggctggatgccatga 13507382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 16244414 - 16244467
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    ||||||||||| |||||| ||||||  |||||||||| ||||||||||||| ||||    
T  16244414 agaagtcctagatcaactggcaaaa--tgccgaaattgttaggctggatgccatga 16244467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 18861892 - 18861839
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  18861892 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 18861839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 31205308 - 31205255
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  31205308 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 31205255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 817 - 874
Alignment:
Q  166 atctagaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||| ||  |||||| ||||||| |||||| |||||| ||||    
T  817 atctagaagtcctagctcaactggc--aaaatgtcgaaattgttaggccggatgccatga 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 9370 - 9423
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||  |||||||||||||| |||||| |||||| ||||    
T  9370 agaagtcctagctcaactggc--aaaatgccgaaattgttaggccggatgccatga 9423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 1366 - 1313
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  1366 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 1183 - 1130
Alignment:
Q  170 agaagtcctagctcaacttgcaaaaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||    
T  1183 agaagtcctagctcaactggcaaaa--tgccgaaattgttaggccggatgccatga 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 93072 - 93040
Alignment:
Q  193 aaaatgccgaaattattaggctggatgctatga 225  Q
    |||||||||||||||||||||||||||| ||||    
T  93072 aaaatgccgaaattattaggctggatgccatga 93040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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