View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5433-Insertion-6 (Length: 526)
Name: NF5433-Insertion-6
Description: NF5433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5433-Insertion-6 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 293 - 526
Target Start/End: Complemental strand, 13726674 - 13726441
Alignment:
| Q |
293 |
gaaaaggtctaaatcctacatggaaaggtcacaatcaattgatgctttgcaatcttttttgttcaatggattcattgattagaatatcattatgtctatt |
392 |
Q |
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| T |
13726674 |
gaaaaggtcaaaatcctacatggaaaggtcacaatcacttgatgctttgctatcttttttgttcaatgcattcattgattagaatatcattatgtctatt |
13726575 |
T |
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| Q |
393 |
acttttacacccttcttcatatataaacacattccagaagaaaagagacaccacaaaaatcaatggagaataaaagcaaaaaacatgcaccacacatctt |
492 |
Q |
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| T |
13726574 |
acttttacacccttcttcatatataaacacattccagaagaaaagagacaccacaaaaatcaatggagaataaaagcaaaaaacatgcaccacacatctt |
13726475 |
T |
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| Q |
493 |
agtgttaccgtatccattacaaggccacataaac |
526 |
Q |
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| T |
13726474 |
agtgtttccatatccattacaaggtcacataaac |
13726441 |
T |
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Target: chr4 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 4702197 - 4702230
Alignment:
| Q |
42 |
aggaaatattttgattttaaagttgataatataa |
75 |
Q |
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| T |
4702197 |
aggaaatattttgatttcaaagttgataatataa |
4702230 |
T |
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