View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5433_low_3 (Length: 278)

Name: NF5433_low_3
Description: NF5433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5433_low_3
NF5433_low_3
[»] chr4 (22 HSPs)
chr4 (10-257)||(4701887-4702134)
chr4 (10-224)||(4703004-4703218)
chr4 (58-241)||(47878273-47878455)
chr4 (10-234)||(20599689-20599907)
chr4 (58-249)||(47874715-47874898)
chr4 (79-241)||(54574598-54574759)
chr4 (10-155)||(19050360-19050505)
chr4 (132-225)||(42278807-42278900)
chr4 (58-250)||(42278201-42278384)
chr4 (63-157)||(42391758-42391852)
chr4 (152-241)||(6039367-6039456)
chr4 (152-221)||(19051163-19051232)
chr4 (58-107)||(31844866-31844915)
chr4 (57-158)||(38216617-38216716)
chr4 (161-234)||(19050488-19050561)
chr4 (63-119)||(48739950-48740006)
chr4 (58-113)||(2786395-2786450)
chr4 (10-69)||(56041086-56041147)
chr4 (58-119)||(21621995-21622056)
chr4 (63-104)||(32244451-32244492)
chr4 (10-112)||(39869042-39869146)
chr4 (10-119)||(39870564-39870675)
[»] chr5 (37 HSPs)
chr5 (63-241)||(32640445-32640622)
chr5 (58-249)||(2464821-2465012)
chr5 (58-256)||(40611412-40611609)
chr5 (58-249)||(40612439-40612630)
chr5 (58-224)||(25590582-25590748)
chr5 (58-239)||(28590903-28591084)
chr5 (58-241)||(8075623-8075804)
chr5 (10-241)||(9537144-9537370)
chr5 (58-225)||(8074602-8074769)
chr5 (58-225)||(14889921-14890088)
chr5 (58-206)||(2466596-2466744)
chr5 (83-225)||(28589876-28590021)
chr5 (10-113)||(9537945-9538050)
chr5 (79-249)||(4593033-4593197)
chr5 (63-222)||(18004815-18004970)
chr5 (136-224)||(9537860-9537948)
chr5 (58-249)||(544800-544989)
chr5 (161-240)||(21069540-21069619)
chr5 (66-164)||(34173440-34173538)
chr5 (152-249)||(4593890-4593986)
chr5 (57-156)||(578625-578724)
chr5 (71-113)||(31946949-31946991)
chr5 (58-249)||(545824-546007)
chr5 (64-113)||(13651057-13651106)
chr5 (58-163)||(14891013-14891118)
chr5 (167-249)||(14890943-14891024)
chr5 (72-142)||(16979178-16979248)
chr5 (58-130)||(19183113-19183185)
chr5 (152-223)||(30970289-30970361)
chr5 (81-157)||(32641599-32641675)
chr5 (94-140)||(2314403-2314449)
chr5 (58-108)||(19186130-19186180)
chr5 (58-226)||(32555324-32555497)
chr5 (56-113)||(37072728-37072785)
chr5 (10-95)||(18400300-18400387)
chr5 (19-51)||(27720594-27720626)
chr5 (177-225)||(32641547-32641595)
[»] scaffold0767 (3 HSPs)
scaffold0767 (19-246)||(6016-6242)
scaffold0767 (10-163)||(5721-5874)
scaffold0767 (177-225)||(5873-5921)
[»] chr7 (46 HSPs)
chr7 (10-238)||(5929908-5930134)
chr7 (58-222)||(7509259-7509424)
chr7 (58-249)||(48788456-48788643)
chr7 (58-226)||(7258427-7258594)
chr7 (10-247)||(12223469-12223700)
chr7 (10-241)||(19433705-19433935)
chr7 (79-249)||(48646222-48646391)
chr7 (58-256)||(10898847-10899044)
chr7 (10-155)||(8048638-8048785)
chr7 (58-226)||(35727850-35728018)
chr7 (58-249)||(42477532-42477722)
chr7 (58-225)||(48647247-48647414)
chr7 (58-225)||(43461526-43461688)
chr7 (58-249)||(45584277-45584467)
chr7 (10-147)||(32793293-32793432)
chr7 (58-225)||(43457620-43457788)
chr7 (12-256)||(34710164-34710402)
chr7 (10-225)||(6680324-6680534)
chr7 (58-249)||(39708281-39708464)
chr7 (58-226)||(44333289-44333457)
chr7 (91-206)||(12221486-12221601)
chr7 (58-155)||(33607368-33607465)
chr7 (70-223)||(35728900-35729045)
chr7 (58-224)||(7259498-7259655)
chr7 (79-225)||(30924821-30924959)
chr7 (152-256)||(45583832-45583936)
chr7 (63-225)||(10894500-10894662)
chr7 (64-241)||(44334246-44334415)
chr7 (10-236)||(34707723-34707943)
chr7 (58-183)||(48777409-48777534)
chr7 (64-148)||(2677094-2677178)
chr7 (62-154)||(24934953-24935045)
chr7 (159-238)||(33061081-33061161)
chr7 (161-249)||(33607297-33607385)
chr7 (57-113)||(39824300-39824356)
chr7 (167-249)||(32794575-32794657)
chr7 (79-129)||(44530517-44530567)
chr7 (79-172)||(42478127-42478220)
chr7 (91-202)||(46287215-46287323)
chr7 (10-103)||(48249680-48249775)
chr7 (63-129)||(8375503-8375569)
chr7 (151-224)||(8047072-8047145)
chr7 (10-59)||(12220144-12220193)
chr7 (64-113)||(24935608-24935657)
chr7 (161-222)||(32793423-32793484)
chr7 (58-102)||(25621628-25621672)
[»] chr3 (30 HSPs)
chr3 (58-256)||(17700671-17700868)
chr3 (58-249)||(55389250-55389440)
chr3 (58-256)||(48573137-48573337)
chr3 (58-225)||(48574263-48574430)
chr3 (58-249)||(36280098-36280288)
chr3 (58-221)||(2591777-2591941)
chr3 (58-249)||(55388211-55388404)
chr3 (58-226)||(48809459-48809626)
chr3 (58-249)||(36279104-36279287)
chr3 (64-226)||(53958905-53959065)
chr3 (58-225)||(52318129-52318288)
chr3 (10-156)||(20464191-20464339)
chr3 (63-155)||(47428457-47428549)
chr3 (73-153)||(3693996-3694076)
chr3 (150-226)||(52317158-52317234)
chr3 (58-156)||(48808524-48808622)
chr3 (97-249)||(17701708-17701861)
chr3 (63-148)||(33427888-33427973)
chr3 (63-154)||(19114670-19114760)
chr3 (81-167)||(33837338-33837424)
chr3 (10-136)||(612336-612464)
chr3 (74-155)||(47075245-47075326)
chr3 (63-175)||(19115021-19115133)
chr3 (68-155)||(45599046-45599133)
chr3 (82-148)||(40317946-40318012)
chr3 (86-155)||(33837542-33837611)
chr3 (152-224)||(36827267-36827340)
chr3 (64-113)||(40206060-40206109)
chr3 (63-156)||(47117945-47118037)
chr3 (63-155)||(33428329-33428421)
[»] chr8 (25 HSPs)
chr8 (58-225)||(32898249-32898416)
chr8 (10-249)||(5736964-5737205)
chr8 (63-241)||(28619321-28619498)
chr8 (10-237)||(5737805-5738024)
chr8 (17-225)||(5965226-5965436)
chr8 (63-256)||(35177551-35177743)
chr8 (58-226)||(35178608-35178776)
chr8 (58-224)||(1952783-1952941)
chr8 (10-155)||(41121227-41121374)
chr8 (58-225)||(10407388-10407555)
chr8 (17-171)||(32564347-32564503)
chr8 (10-163)||(30134688-30134843)
chr8 (58-158)||(45476414-45476514)
chr8 (57-159)||(8569559-8569661)
chr8 (10-119)||(28619111-28619223)
chr8 (58-147)||(41122624-41122713)
chr8 (58-134)||(28524930-28525006)
chr8 (58-130)||(41754140-41754212)
chr8 (58-113)||(12637657-12637712)
chr8 (58-113)||(41754702-41754757)
chr8 (161-239)||(32563828-32563906)
chr8 (58-113)||(33315030-33315085)
chr8 (58-104)||(39138569-39138615)
chr8 (58-163)||(10406358-10406463)
chr8 (79-119)||(45476355-45476395)
[»] chr1 (28 HSPs)
chr1 (10-241)||(51450122-51450355)
chr1 (58-234)||(6612582-6612758)
chr1 (58-249)||(52439613-52439804)
chr1 (10-215)||(22857372-22857580)
chr1 (79-226)||(52440363-52440510)
chr1 (58-249)||(32665557-32665741)
chr1 (10-224)||(34088262-34088470)
chr1 (10-148)||(22856802-22856940)
chr1 (10-155)||(3117771-3117918)
chr1 (58-154)||(25038053-25038149)
chr1 (58-154)||(25043265-25043361)
chr1 (81-225)||(32664678-32664821)
chr1 (58-225)||(7944307-7944470)
chr1 (159-226)||(7945377-7945444)
chr1 (57-147)||(11830060-11830150)
chr1 (58-163)||(9340891-9340996)
chr1 (64-156)||(9339804-9339896)
chr1 (167-249)||(9340821-9340902)
chr1 (79-156)||(16249836-16249913)
chr1 (63-130)||(1407805-1407872)
chr1 (66-163)||(6613833-6613930)
chr1 (64-109)||(8975337-8975382)
chr1 (63-175)||(5782551-5782663)
chr1 (161-221)||(25038133-25038193)
chr1 (161-221)||(25043345-25043405)
chr1 (96-172)||(51453576-51453652)
chr1 (63-158)||(1001755-1001848)
chr1 (58-119)||(7945464-7945525)
[»] chr2 (33 HSPs)
chr2 (58-225)||(17330023-17330190)
chr2 (58-225)||(24458212-24458379)
chr2 (58-249)||(32765089-32765280)
chr2 (66-249)||(31090317-31090500)
chr2 (58-226)||(39015157-39015325)
chr2 (63-224)||(7073807-7073969)
chr2 (58-251)||(40000114-40000306)
chr2 (79-241)||(2911276-2911437)
chr2 (63-184)||(5914857-5914978)
chr2 (58-241)||(24459243-24459425)
chr2 (58-225)||(39016196-39016354)
chr2 (17-140)||(43380696-43380821)
chr2 (58-239)||(31091318-31091498)
chr2 (58-225)||(14704157-14704316)
chr2 (72-153)||(21732281-21732362)
chr2 (81-249)||(2910275-2910443)
chr2 (10-159)||(7412214-7412365)
chr2 (150-226)||(32766083-32766159)
chr2 (10-155)||(17466683-17466829)
chr2 (21-155)||(43381045-43381181)
chr2 (12-153)||(21733627-21733770)
chr2 (12-155)||(17466165-17466310)
chr2 (10-52)||(31814303-31814345)
chr2 (57-158)||(31442502-31442603)
chr2 (58-130)||(14887377-14887449)
chr2 (165-241)||(43380823-43380899)
chr2 (101-163)||(33163304-33163366)
chr2 (64-130)||(37607280-37607346)
chr2 (167-241)||(39256802-39256876)
chr2 (57-170)||(31443084-31443197)
chr2 (10-157)||(39256871-39257022)
chr2 (73-113)||(18676719-18676759)
chr2 (58-130)||(26585248-26585319)
[»] chr6 (6 HSPs)
chr6 (13-224)||(31239772-31239985)
chr6 (58-130)||(30748162-30748234)
chr6 (57-142)||(19600112-19600196)
chr6 (152-225)||(29845764-29845838)
chr6 (152-225)||(29857029-29857103)
chr6 (67-108)||(31219101-31219142)
[»] scaffold0039 (1 HSPs)
scaffold0039 (10-181)||(79195-79368)
[»] scaffold0016 (1 HSPs)
scaffold0016 (81-154)||(36400-36473)
[»] scaffold0237 (2 HSPs)
scaffold0237 (152-225)||(1969-2043)
scaffold0237 (152-225)||(3231-3305)


Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 257
Target Start/End: Original strand, 4701887 - 4702134
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacatgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccc 109  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  4701887 ataattctgttaagtgatgatattacacaagttttacgatgacgtggcatgaagtgtcacatggactaaagtgaaagtagaaaatagtcactttggtccc 4701986  T
Q  110 tgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaaca 209  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  4701987 tgaaacaaaagtcaatatcctaaaattgaatctcaaatctctaaatccctagatctcaaatccctacatgtcatttaattctctattttgttcaaaaaca 4702086  T
Q  210 atcttccattaaacacacacttactattaggttcctgactatacatat 257  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  4702087 atcttccattaaacacacacttactgttagattcctgactatacatat 4702134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 224
Target Start/End: Complemental strand, 4703218 - 4703004
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||| |||||||||||||| |  | ||||||| |||||||||||||  ||  ||||| |||||||| |||||||||| ||||| ||||||||||||    
T  4703218 ataattctattaagtgatgatgtggtgcgagttttatgatgacgtgacatatgagatgtcatatggactaaagtgaaagtataaaattgtcactttggtc 4703119  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    |||||  ||||| | |||||||  ||||||||||| |||||||| |||| |||||||||||||||||| ||||||||||||||||  |||| |||||||     
T  4703118 cctgacccaaaaatcaatatccccaaattgaatctcaaatctctgaatcactaaatctcaaatccctaaatgtcatttaattctc--ttttgttcaaaat 4703021  T
Q  208 caatcttccattaaaca 224  Q
    |||||||||||||||||    
T  4703020 caatcttccattaaaca 4703004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 47878455 - 47878273
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | |||||||||| |||||||||||||||||||||||| ||||| | ||||| | |||||||||| | ||||  |||||| |    
T  47878455 atgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaattc 47878356  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
     |||||| |||||||||| || |||| ||||||||| ||||  ||||||  |||||||||||||||||| ||||||||||||||    
T  47878355 ttaaatcacaaatccctaaatctcatctaattctctcttttgctcaaaattaatcttccattaaacaca-acttactattaggt 47878273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 20599907 - 20599689
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgac--atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||||||||  || | ||| | | ||||| ||||  |||| |||||||| |||||| | |||||||||||||||||||||||||||    
T  20599907 ataattatgttaagtgatgatgtgacataggttatgcaatgacatgacatatgaggtgtcacagggactaaaatgaaagtaaaaaatggtcactttggtc 20599808  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    |||||| ||||| ||||||| |  |||||||||||         |||| |||||||| |||||| ||| ||||||| ||||||||| |||| |||||||     
T  20599807 cctgaaccaaaaattaatattcccaaattgaatct--------caaattcctaaatcgcaaatctctaaatgtcatctaattctctcttttgttcaaaat 20599716  T
Q  208 caatcttccattaaacacacacttact 234  Q
    ||||||||||||||||||  |||||||    
T  20599715 caatcttccattaaacaccaacttact 20599689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 47874715 - 47874898
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||||||||||||||||| |||| ||||| | ||||||| ||||||||||     |||   ||||||    
T  47874715 atgatgtgtcacagggaccaaagtgaaagtataaaatggtcactttggtccttgaaccaaaaatcaatatcccaaaattgaat-----atc---aaatcc 47874806  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctc-tattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||||| |||||| || ||||||| ||||| || | |||| ||||||| ||||||||||||||||||| || |||| |||||| |||||||    
T  47874807 ctaaatcttaaatccttaaatgtcatataattatctttttttgttcaaaatcaatcttccattaaacaca-acctactgttaggtccctgact 47874898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 54574598 - 54574759
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatat 178  Q
    |||||||||| |||||| |||||||| |||| ||| ||||| | || || || ||||||||| | ||||  |||| ||| ||||||||||||||||| ||    
T  54574598 agtgaaagtagaaaatgatcactttgatccccgaaccaaaaatcaaaattctcaaattgaatatcaaattcctaactccttaaatctcaaatccctaaat 54574697  T
Q  179 gtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    ||||| ||||||||| |||  |||||||  |||||||||||||||||| ||||||| ||||||    
T  54574698 gtcatctaattctctctttagttcaaaattaatcttccattaaacaca-acttactgttaggt 54574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 19050360 - 19050505
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||| ||||||||||||||   ||| ||||||||||||  || |||  || ||||||||||||||| |||||||||| |||||| |||||||||||    
T  19050360 ataattctattaagtgatgatgtg--acatgttttacgatgatatggcatatgaggtgtcacatggactaaagtgaaagtataaaatgatcactttggtc 19050457  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    | |||| ||||| | |||||||  ||||||||||| ||||| ||||||    
T  19050458 cttgaagcaaaaatcaatatccctaaattgaatctcaaatccctaaat 19050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 42278900 - 42278807
Alignment:
Q  132 aaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||| ||||||| ||||||||| |||| |||||||  |||||||||||||||||    
T  42278900 aaattgaatatcaaatttctaaatccttaaatctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatcttccattaaacac 42278807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 250
Target Start/End: Original strand, 42278201 - 42278384
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | ||||||| || |||||||||||||||||||||||| ||||| | |||||||  |||||||||     |||   ||||||    
T  42278201 atgaggtgtcacagggaccaaagtgaaactagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaat-----atc---aaatcc 42278292  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgacta 250  Q
    |||||||| |||||| ||  |||||| ||| | ||| |||| |||||||  |||||||||||||||||  || |||| |||||| ||||||||    
T  42278293 ctaaatcttaaatccttaactgtcatctaa-tatcttttttgttcaaaataaatcttccattaaacaccaacctactgttaggtccctgacta 42278384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 42391852 - 42391758
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||||||||  |||| || ||||| | ||||||| ||| ||||| ||||||||    
T  42391852 gtgtcacatggactaaagtgaaagtagaaaatggtcactttagtccctgaactaaaaattcatatcttcaaattgagtctcaaatccctaaatcc 42391758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 6039367 - 6039456
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    ||||| ||| |||||||||||||| ||||||| ||||||||| |||| ||||||| |||||||||||||||||   ||||||| ||||||    
T  6039367 aaatcactagatctcaaatccctaaatgtcatataattctctcttttgttcaaaatcaatcttccattaaacatcaacttactgttaggt 6039456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 19051232 - 19051163
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaa 221  Q
    |||||||||||||||||||| ||| ||||||| || ||| || |||| ||||||| ||||||||||||||    
T  19051232 aaatccctaaatctcaaatctctaaatgtcatctagttcgctcttttgttcaaaatcaatcttccattaa 19051163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 31844915 - 31844866
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  31844915 atgacgtgtcacaaggactaaagtgaaagtaaaaaatggtcactttggtc 31844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 38216617 - 38216716
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    ||||| |||| |||||||||| |||||||||  ||||||||| ||||||| |||||| | | | | ||||||| |||||||||| | ||||| |||||||    
T  38216617 catgaggtgttacatggactaaagtgaaagt--aaaatggtccctttggttcctgaatcgataatcaatatcccaaaattgaatatcaaatccctaaatc 38216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 19050488 - 19050561
Alignment:
Q  161 aatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttact 234  Q
    ||||||||||||||| ||| ||| ||| ||||| |||| ||||||| |||| |||||||||||||  |||||||    
T  19050488 aatctcaaatccctaaatgccatctaaatctcttttttgttcaaaatcaattttccattaaacaccaacttact 19050561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 48740006 - 48739950
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaa 119  Q
    ||||||||  ||||| |||||||||||||||| |||||||| ||||||||| |||||    
T  48740006 gtgtcacaaagactaaagtgaaagtaaaaaatagtcactttagtccctgaaccaaaa 48739950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 2786395 - 2786450
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    ||||||||||| ||||| || ||| |||||| |||||||||||||||||| |||||    
T  2786395 atgaagtgtcatatggattaaagtaaaagtagaaaatggtcactttggtctctgaa 2786450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 56041086 - 56041147
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgac--atgaagtgtcac 69  Q
    |||||| ||||||||||||||||  |||||||||||| ||||| ||||  ||||||||||||    
T  56041086 ataattatgttaagtgatgatgtgacacaagttttacaatgacatgacatatgaagtgtcac 56041147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 21621995 - 21622056
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaa 119  Q
    |||| |||||||| | |||| |||||||||| ||||||||||||||| | |||||| |||||    
T  21621995 atgatgtgtcacaagcactaaagtgaaagtataaaatggtcactttgattcctgaaccaaaa 21622056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 32244451 - 32244492
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttg 104  Q
    ||||||||  ||||| ||||||||||||||||||||||||||    
T  32244451 gtgtcacagagactaaagtgaaagtaaaaaatggtcactttg 32244492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 39869042 - 39869146
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgac--atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||||||||  ||||  ||||| |||||| ||||  || | ||||||||  ||||| | |||||||| ||||| |||||||| |||    
T  39869042 ataattatgttaagtgatgatgtgacacatattttatgatgacatgacatatcaggtgtcacaatgactaaattgaaagtataaaatagtcactttagtc 39869141  T
Q  108 cctga 112  Q
    |||||    
T  39869142 cctga 39869146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 39870675 - 39870564
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgac--atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    ||||||||||| ||| |||||||   ||| ||||||||||||| ||||  |||| |||||||| ||| || ||||| |||| ||||  |||||||| |||    
T  39870675 ataattctgttgagtaatgatgtgatacacgttttacgatgacatgacatatgaggtgtcacaaggaataaagtgagagtagaaaaatgtcactttcgtc 39870576  T
Q  108 cctgaaacaaaa 119  Q
    || ||| |||||    
T  39870575 cccgaaccaaaa 39870564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 32640445 - 32640622
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    |||||||| |||| | |||||||||| ||||||||||||||||||| |||| ||||| | ||||| | |||||||||| | ||||  |||||||| ||||    
T  32640445 gtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaatccttaaa 32640544  T
Q  163 tctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||  |||||||||||||||||| ||||||| ||||||    
T  32640545 tctcaaatccctaaatgtcatctaattctctcttttattcaaaattaatcttccattaaacaca-acttactgttaggt 32640622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 2464821 - 2465012
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| ||||| | |||||||  ||||||||| | ||||| ||||||||    
T  2464821 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatcc 2464920  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
     ||||||| |||||| || ||||||| ||||| ||| |||| ||||||  ||||||||||||||||||  || |||| |||||| |||||||    
T  2464921 ttaaatcttaaatccttaaatgtcatctaattatcttttttgttcaaagtcaatcttccattaaacaccaacctactgttaggtccctgact 2465012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 40611412 - 40611609
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||||||||||| |||||||||| ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  40611412 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatcc 40611511  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgactatacata 256  Q
     ||||||||||||||||| ||||||| ||||||||| |||| |||||||  |||||| ||||||||||| ||||| | |||||| ||||||| ||||||    
T  40611512 ttaaatctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatctttcattaaacaca-acttagtgttaggtccctgactgtacata 40611609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 40612630 - 40612439
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||| ||||||||||||||| ||||| | ||||| |  |||||||||   ||||| ||||||||    
T  40612630 atgaggtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaatcc 40612531  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||||| ||||||||| || |||| ||||| ||| |||| ||||||| ||||||||||||||||||  || |||| |||||| |||||||    
T  40612530 ctaaatcttaaatccctaaatatcatctaattatctcttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccctgact 40612439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 25590582 - 25590748
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||| ||||| ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  25590582 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatcc 25590681  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaaca 224  Q
     |||||||||||||| || ||||||| ||||||||| |||| |||||||  ||||||||||||||||    
T  25590682 ttaaatctcaaatccataaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca 25590748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 28591084 - 28590903
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagtt-aatatcctaaaattgaatcttaaatctctaaatc 156  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| |||||  | ||||| |  ||||||||| | ||||   ||||||    
T  28591084 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaatcaatattcccaaattgaatatcaaattcttaaatc 28590985  T
Q  157 cctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattag 239  Q
    | ||||||||||||||||| ||||||| ||||||||| |||| |||||||  |||||||||||||||||| ||||||| ||||    
T  28590984 cttaaatctcaaatccctaaatgtcatataattctcttttttgttcaaaattaatcttccattaaacaca-acttactgttag 28590903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 8075804 - 8075623
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||  |||||| ||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||  ||| ||||    
T  8075804 atgaggtgtcacaaggaccaaagtgaaagtcgaaaatgatcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctatatcc 8075705  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    ||||||||||||| |||| ||||||| ||||||||| |||| |||||||  |||||||||||||||||| ||||||| ||||||    
T  8075704 ctaaatctcaaat-cctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacaca-acttactgttaggt 8075623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 9537144 - 9537370
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgac--gtgacatgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| || ||||||||||||| ||||| ||||||||| |||  || | |||| ||||||||  ||||| |||||||||| ||||| ||||||||| ||    
T  9537144 ataattatggtaagtgatgatgtggcacatgttttacgacgacaagtcatatgatgtgtcacagtgactaaagtgaaagtagaaaatagtcactttgatc 9537243  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    |||||| ||||| | |||||||  |||||||||||         |||||||||||||| |||||| || ||||||| ||||||||| |||| ||||||      
T  9537244 cctgaatcaaaaatcaatatccccaaattgaatct--------caaatccctaaatctaaaatccataaatgtcatctaattctctcttttgttcaaagt 9537335  T
Q  208 caatctt-ccattaaacacacacttactattaggt 241  Q
    ||||||| |||||||||||  ||||||||||||||    
T  9537336 caatcttcccattaaacaccaacttactattaggt 9537370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 8074602 - 8074769
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| | || | |||||||||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||| | ||||||    
T  8074602 atgaggtgtcacaggtaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccccaaatcc 8074701  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||| |||||  || ||||||| ||||| ||| || | ||||||| ||||||| ||||||||||    
T  8074702 ctaaatcttaaatctttaaatgtcatctaattatctcttctgttcaaaatcaatcttacattaaacac 8074769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 14889921 - 14890088
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | ||| |||||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||| | || || ||||||||    
T  14889921 atgaggtgtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaattcgctaaatcc 14890020  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||| |||||| || ||||||| || || | | |||| ||||||| ||||||||||||||||||    
T  14890021 ctaaatcttaaatccttaaatgtcatctagttatttcttttgttcaaaatcaatcttccattaaacac 14890088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 2466744 - 2466596
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||| ||||||| | |||||||||| ||||| |||| ||||||||||||| ||||| | ||||| |  ||||||||| | ||||   |||||||    
T  2466744 atgaggtgtcccatggaccaaagtgaaagtagaaaatagtcattttggtccctgaaccaaaattcaatattcccaaattgaatatcaaattcttaaatcc 2466645  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaa 206  Q
     ||||||||||||||||| ||||||| ||||||||| |||| |||||||    
T  2466644 ttaaatctcaaatccctaaatgtcatctaattctcttttttgttcaaaa 2466596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 83 - 225
Target Start/End: Original strand, 28589876 - 28590021
Alignment:
Q  83 aaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtca 182  Q
    |||||| |||||||||||||||||||||||| ||||| | ||||| | |||||||||| | ||||| ||||||| ||||| || |||||| || ||||||    
T  28589876 aaagtagaaaatggtcactttggtccctgaaccaaaaatcaatataccaaaattgaatatcaaatcactaaatctctaaaccttaaatccttaaatgtca 28589975  T
Q  183 ttta---attctctattttattcaaaaacaatcttccattaaacac 225  Q
    | ||   ||| | | |||| ||||||| ||||||||||||||||||    
T  28589976 tgtaattatttttttttttgttcaaaatcaatcttccattaaacac 28590021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 9538050 - 9537945
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||| ||||  |||| ||||||||||||  ||||||  || || |||||||||||| |||||||||| ||||||||||||||||||    
T  9538050 ataattatgttaagtgattatgtgacacatgttttacgatgatatgacatatgatgtttcacatggactaaagtgaaagtataaaatggtcactttggtc 9537951  T
Q  108 cctgaa 113  Q
    ||||||    
T  9537950 cctgaa 9537945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 249
Target Start/End: Original strand, 4593033 - 4593197
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatat 178  Q
    |||||||||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||  | |||      ||||||||||||| |||| | || ||    
T  4593033 agtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaaaataaaa------aatccctaaatcttaaattcttaaat 4593126  T
Q  179 gtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||| ||||| ||| |||| ||||||| ||||||| ||||||||||  || |||| |||||| |||||||    
T  4593127 gtcatctaattatctcttttgttcaaaatcaatctttcattaaacaccaacatactgttaggtccctgact 4593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 222
Target Start/End: Original strand, 18004815 - 18004970
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    ||||||||  ||||| | |||||||| ||||| |||||||||||||||||| ||||| | |||||||  ||||||||| | ||||| ||||||||    |    
T  18004815 gtgtcacagagactaaaatgaaagtagaaaatagtcactttggtccctgaatcaaaattcaatatccccaaattgaatatcaaatccctaaatcc----a 18004910  T
Q  163 tctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaa 222  Q
    |||||||||| || |||| || ||||||||| | || ||||| |  ||||||||||||||    
T  18004911 tctcaaatccttaaatgttatctaattctctctcttgttcaatattaatcttccattaaa 18004970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 9537948 - 9537860
Alignment:
Q  136 tgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaaca 224  Q
    ||||||| || || ||||||||||||||||||||| |||| |||| || |||||||||  ||| ||||||| |||||||||||||||||    
T  9537948 tgaatctcaattccctaaatccctaaatctcaaattcctaaatgttatctaattctctcctttgttcaaaatcaatcttccattaaaca 9537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 544800 - 544989
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||  | |||||||||| ||||| |||| || ||| |||||| ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  544800 atgaggtgtcacagggatcaaagtgaaagtagaaaatagtcatttgggttcctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatcc 544899  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||||||||||| |||| |  |||| ||||| ||| |||| |||||||  |||||| ||||||||||| ||||| | |||||| |||||||    
T  544900 ctaaatctcaaat-cctaaaaatcatataattatctcttttgttcaaaattaatctttcattaaacaca-acttattgttaggtccctgact 544989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 21069540 - 21069619
Alignment:
Q  161 aatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattagg 240  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||| |||| || ||||||||||  ||||||| |||||    
T  21069540 aatctcaaatccctaaatgtcatctaattctctattttcttcaaaatcaatatttcattaaacaccaacttactgttagg 21069619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 34173440 - 34173538
Alignment:
Q  66 tcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatc 164  Q
    ||||| |||||| | |||||||| |||||| ||||||||||| ||||| ||||| | |||||||  ||||||||| | ||||| |||||||||||||||    
T  34173440 tcacagggactaaactgaaagtagaaaatgatcactttggtctctgaaccaaaaatcaatatccccaaattgaatttcaaatcactaaatccctaaatc 34173538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 4593986 - 4593890
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||| ||||||||||||||||||| ||||||| ||||| ||| |||| |||||||  |||||||||||||||| | ||||| | |||||| |||||||    
T  4593986 aaattcctaaatctcaaatccctaaatgtcatctaattatctcttttgttcaaaattaatcttccattaaacata-acttaatgttaggtccctgact 4593890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 578724 - 578625
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    ||||| |||| |||||||||| | |||||||||| |||| ||||||||||||||||| | ||| | |||||||  ||||||||||| | || ||||||||    
T  578724 catgaggtgtgacatggactaaaatgaaagtaaagaatgatcactttggtccctgaaccgaaaatcaatatccctaaattgaatctcagatttctaaatc 578625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 31946991 - 31946949
Alignment:
Q  71 tggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  31946991 tggactaaagtgaaagtaaaaaatggtcactttggtccctgaa 31946949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 546007 - 545824
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||| ||||||||||||| |||| ||||| | ||||| |  |||||||||     | |   ||||||    
T  546007 atgaggtgtcacaaggaccaaagtgaaagtagaaaatagtcactttggtccttgaaccaaaaatcaatatgcccaaattgaat-----aac---aaatcc 545916  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||||| |||||  || ||||||| ||||| ||| |||| |||  || ||||||||||||||||||  || |||| |||||| |||||||    
T  545915 ctaaatcttaaatcgttaaatgtcatctaattatctcttttgttctgaatcaatcttccattaaacactaacctactgttaggtccctgact 545824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 13651106 - 13651057
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  13651106 tgtcacagggactaaagtgaaagtaaaaaatggtcactttagtccctgaa 13651057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 14891118 - 14891013
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | ||||| |||| |||||||||||||| ||||||||| ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  14891118 atgaggtgtcacaaggaccaaagtgatagtagaaaatggtcactttagtccctgaatcaaaaatcaatattcccaaattgaatttcaaattcctaaatcc 14891019  T
Q  158 ctaaat 163  Q
    ||||||    
T  14891018 ctaaat 14891013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 14891024 - 14890943
Alignment:
Q  167 aaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||||||| ||||||| |||| |||| |||| |||||||  |||||||||||||||||| ||||| | |||||| |||||||    
T  14891024 aaatccctaaatgtcatctaatcctctcttttgttcaaaattaatcttccattaaacaca-acttattgttaggtccctgact 14890943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 16979178 - 16979248
Alignment:
Q  72 ggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatct 142  Q
    |||||| ||||||  |||||||||||||||||||| |||||| ||||| | |||||||| ||| |||||||    
T  16979178 ggactaaagtgaagataaaaaatggtcactttggttcctgaatcaaaaatcaatatcctcaaactgaatct 16979248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 19183113 - 19183185
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcct 130  Q
    |||| |||||| |||||||| ||||||||||||||||||| |||||| || ||||| | ||| | ||||||||    
T  19183113 atgacgtgtcatatggactaaagtgaaagtaaaaaatggtgactttgctctctgaatcgaaaatcaatatcct 19183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 30970289 - 30970361
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaac-aatcttccattaaac 223  Q
    |||| |||||||||||||| |||| |||||||  ||||||||||||| ||||||| | |||||| ||||||||    
T  30970289 aaattcctaaatctcaaattcctaaatgtcatacaattctctattttgttcaaaatcaaatcttgcattaaac 30970361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 32641675 - 32641599
Alignment:
Q  81 tgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    ||||||||||||||||| |||||| ||||| || ||||| | |||||||  ||||||||| | ||||| ||||||||    
T  32641675 tgaaagtaaaaaatggttactttgatccctcaaccaaaaatcaatatccccaaattgaatatgaaatccctaaatcc 32641599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 2314449 - 2314403
Alignment:
Q  94 tggtcactttggtccctgaaacaaaagttaatatcctaaaattgaat 140  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||    
T  2314449 tggtcactttggtccctgaaccaaaatttaatatccccaaattgaat 2314403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 19186180 - 19186130
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtcc 108  Q
    |||| |||||||| |||| | |||||||||||||||| |||||||||||||    
T  19186180 atgacgtgtcacagggacaaaagtgaaagtaaaaaatagtcactttggtcc 19186130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 32555497 - 32555324
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||||||||||||| |||||||||| ||||| ||||| ||||| |||||| | ||| | ||||  || | | | ||||| ||||  ||||||||    
T  32555497 atgaggtgtcacatggactaaagtgaaagtagaaaattgtcac-ttggttcctgaaccgaaaatcaataatctcatactaaatctcaaattcctaaatcc 32555399  T
Q  158 ctaaat-----ctcaaatccctatatgtcatttaattctctattttattcaaaaac-aatcttccattaaacaca 226  Q
    | || |     |||||||||||| || |||| ||||||||| ||||  |||||| | ||||||||||||||||||    
T  32555398 cgaattcaatcctcaaatccctaaatctcatctaattctctcttttgatcaaaatcaaatcttccattaaacaca 32555324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 37072728 - 37072785
Alignment:
Q  56 acatgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    |||||| ||||||||||||| | | |||||||| ||||| |||||||| |||||||||    
T  37072728 acatgaggtgtcacatggaccaaaatgaaagtagaaaatagtcactttagtccctgaa 37072785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 18400300 - 18400387
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgac--atgaagtgtcacatggactacagtgaaagtaaaaaatg 95  Q
    |||||| |||||||||||||||| || || ||||||| ||||| ||||  || | |||||||||||| || || ||||||| ||||||    
T  18400300 ataattatgttaagtgatgatgtggctcaggttttacaatgacatgacatatcaggtgtcacatggagtaaagcgaaagtagaaaatg 18400387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 27720594 - 27720626
Alignment:
Q  19 ttaagtgatgatgttgcacaagttttacgatga 51  Q
    |||||||||||||| ||||||||||||||||||    
T  27720594 ttaagtgatgatgtagcacaagttttacgatga 27720626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 32641595 - 32641547
Alignment:
Q  177 atgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    ||||||| ||||| ||| |||| ||||||| ||||||||||||||||||    
T  32641595 atgtcatctaattatcttttttgttcaaaatcaatcttccattaaacac 32641547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 6242 - 6016
Alignment:
Q  19 ttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaaca 116  Q
    ||||||||||||||  || | ||||||| ||||| ||||||  || ||| ||||||||    ||||||||||||||||||||||||||||||||||| ||    
T  6242 ttaagtgatgatgtgacataggttttacaatgacatgacatatgaggtgacacatggaa---agtgaaagtaaaaaatggtcactttggtccctgaacca 6146  T
Q  117 aaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttcc 216  Q
    ||| | |||||||  ||||  ||||| ||||  |||||||||||||||||||||||||| ||||||| ||||| ||| |||| ||||||| ||||||||     
T  6145 aaaatcaatatccccaaatataatctcaaattcctaaatccctaaatctcaaatccctaaatgtcatataattatctcttttgttcaaaatcaatcttca 6046  T
Q  217 attaaacacacacttactattaggttcctg 246  Q
    |||||||||  ||||||| |||||| ||||    
T  6045 attaaacaccaacttactgttaggtccctg 6016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 5721 - 5874
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacatgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccc 109  Q
    |||||| ||||| |||||||||   ||||  |||||||||||| |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| ||||    
T  5721 ataattatgttatgtgatgatgcgacacatattttacgatgacatgacatgaggtgtcacatagactaaagtgaaagtaaaaagtggtcactttgatccc 5820  T
Q  110 tgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaat 163  Q
    |||| ||||| | |||||||| ||||| ||||| ||||| |||| ||| |||||    
T  5821 tgaaccaaaaatcaatatcctcaaattaaatctcaaatccctaattccttaaat 5874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 5873 - 5921
Alignment:
Q  177 atgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    ||||||| ||||||||| |||| ||||||| ||||||||||||||||||    
T  5873 atgtcatctaattctctcttttgttcaaaatcaatcttccattaaacac 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 5930134 - 5929908
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat------gaagtgtcacatggactacagtgaaagtaaaaaatggtcacttt 103  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||      || ||||||||| ||||| ||||||||| ||||||| |||||||    
T  5930134 ataattctgttaagtgatgatgtggcacaggttttacgatgtcgtgacatatatatgaggtgtcacatagactaaagtgaaagttaaaaatgatcacttt 5930035  T
Q  104 ggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattca 203  Q
    | |||||| | ||||| | ||||| |  ||||||||||| |||||||||||||        |||||||| || ||||||||||||||||| ||| |||||    
T  5930034 gatccctggatcaaaaatcaatattcccaaattgaatctcaaatctctaaatc--------tcaaatccataaatgtcatttaattctctctttcattca 5929943  T
Q  204 aaaacaatcttccattaaacacacacttactatta 238  Q
    ||| || |||| ||||||||||||| |||||||||    
T  5929942 aaatcagtctttcattaaacacacatttactatta 5929908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 7509424 - 7509259
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagta-aaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    |||| |||||| |||||||| |||||||||| |||||| ||||||||||||||| || ||||| | |||||||  ||||||||||| ||||| ||||| |    
T  7509424 atgatgtgtcatatggactaaagtgaaagtagaaaaatagtcactttggtccctaaaccaaaaatcaatatccccaaattgaatctcaaatccctaaacc 7509325  T
Q  157 cctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaa 222  Q
    ||||||||||||||||||| || ||||||||||| || | || ||||||| ||| |||||||||||    
T  7509324 cctaaatctcaaatccctaaatatcatttaattcactctcttgttcaaaatcaaccttccattaaa 7509259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 48788643 - 48788456
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||  |||||| |    
T  48788643 atgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcacaaattgaatatcaaattcctaaattc 48788544  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
     ||||||||||||||||   |||||||||||||||| |||| |||||||  |||||||||||||||||| ||||| | |||||| |||||||    
T  48788543 ttaaatctcaaatccct---tgtcatttaattctctcttttgttcaaaattaatcttccattaaacaca-acttattgttaggtccctgact 48788456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 7258427 - 7258594
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  7258427 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatcc 7258526  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
     ||||||||||||||||| ||||||| ||||||||| |||| ||| |||  ||||||||||||||||||    
T  7258527 ttaaatctcaaatccctaaatgtcatctaattctctcttttgttc-aaattaatcttccattaaacaca 7258594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 12223700 - 12223469
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||||||||||||||||||  |||| ||||||||||||| ||||||  ||  ||||||| | |||| |||||||||||||||| ||||||||| ||    
T  12223700 ataattctgttaagtgatgatgtgacacaggttttacgatgacatgacatatgagttgtcacaggaactaaagtgaaagtaaaaaattgtcactttgatc 12223601  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    | |||| ||||| | |||||||  |||||||||||         |||||||||||| |||||||| || ||||||| |||||  || |||  |||||||     
T  12223600 cttgaaccaaaaatcaatatccccaaattgaatct--------caaatccctaaatttcaaatccataaatgtcatctaattacctctttagttcaaaat 12223509  T
Q  208 caatcttccattaaacacacacttactattaggttcctga 247  Q
    ||||||||||||||||||  ||||| |||||||| |||||    
T  12223508 caatcttccattaaacaccaacttattattaggtccctga 12223469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 19433935 - 19433705
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||||||||||||||||||  ||||  |||||||||||| ||||||  || |||| | | |||||| |||||| ||| |||||||||| ||||||     
T  19433935 ataattctgttaagtgatgatgtgacacatattttacgatgacatgacatctgatgtgtgagagggactaaagtgaa-gtagaaaatggtcattttggtt 19433837  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    ||||||  |||| | |||||||  |||||||||||  |||| | || |||| |||||| ||||||||  ||||||||||||| |||||||| |||  ||     
T  19433836 cctgaactaaaaatcaatatccccaaattgaatctctaatccccaactcccaaaatctgaaatccctgaatgtcatttaattatctattttgttc--aat 19433739  T
Q  208 caatcttccattaaacacacacttactattaggt 241  Q
    ||||||||||||||||||  ||||||||||||||    
T  19433738 caatcttccattaaacaccaacttactattaggt 19433705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 79 - 249
Target Start/End: Original strand, 48646222 - 48646391
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatat 178  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||    ||||||||| | ||||  |||||||||||||||||||||||||| ||    
T  48646222 agtgaaagtaaaaaatggtcactttg-tccttgaaccaaaaattaatatttctaaattgaatatcaaattcctaaatccctaaatctcaaatccctaaat 48646320  T
Q  179 gtcat-ttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||| |||||||||| |||| |||||||  |||||||||||||| ||| ||||||| |||||| |||||||    
T  48646321 gtcatcttaattctcttttttgttcaaaattaatcttccattaaataca-acttactgttaggtccctgact 48646391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 10899044 - 10898847
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | || ||||||| ||||||||||||||||||| |||| ||||| | ||||| |  ||||||||| | ||||  |||||| |    
T  10899044 atgaggtgtcacagggaccaaagagaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaattc 10898945  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgactatacata 256  Q
     || |||||||||||||| ||||||| |||||||||  ||| |||||||  |||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  10898944 ttacatctcaaatccctaaatgtcatctaattctctcatttgttcaaaattaatcttccattaaacaca-acttactgttaggtccctgactatgcata 10898847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 8048785 - 8048638
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||| ||||||||||||||  |||| ||| ||||||||| | ||||  || ||||||||||||||| |||||||||| ||||||||||||||||||    
T  8048785 ataattctattaagtgatgatgtgtcacatgttatacgatgacataacatatgatgtgtcacatggactaaagtgaaagtagaaaatggtcactttggtc 8048686  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    |||||| | ||| |||||||||  ||||||||| ||||| ||||||||    
T  8048685 cctgaaccgaaaattaatatccacaaattgaattttaaacctctaaat 8048638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 35727850 - 35728018
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | ||||| |||| ||||||||||||||| ||| | || ||||| | ||||| |  ||||||||| | |||| ||||||| |    
T  35727850 atgaggtgtcacagggaccaaagtgatagtagaaaatggtcactttgatcctttaaccaaaaatcaatattcccaaattgaatatcaaatttctaaattc 35727949  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
    |||||||||||||||||| ||||||| ||||||||| |||| |||||||  ||||||||||||||||||    
T  35727950 ctaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacaca 35728018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 42477532 - 42477722
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||| ||||||||||||||||| |||||  |||||| |  | ||||||| | ||||  |||||| |    
T  42477532 atgaggtgtcacagggaccaaagtgaaagtagaaaatgatcactttggtccctgaaccaaaaactaatattcccatattgaatatcaaattcctaaatac 42477631  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
     ||||||||||||||||| ||||||| ||||||||| |||| |||||||  ||||||||||||| |||| ||||| | |||||| |||||||    
T  42477632 ttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaagcaca-acttaatgttaggtccctgact 42477722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 48647414 - 48647247
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||| ||||||||| ||||| | ||||| |  |||||||||   ||||| ||| ||||    
T  48647414 atgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatatgcccaaattgaataccaaatccctatatcc 48647315  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||| |||||| || || |||| ||||| |||||||| ||||||| ||||||||||||||||||    
T  48647314 ctaaatcttaaatccttaaatatcatctaattatctattttgttcaaaatcaatcttccattaaacac 48647247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 43461688 - 43461526
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||| | |||||||   |||||||||| ||||| |||||||     
T  43461688 atgaggtgtcacatgaactaaagtgaaagtaaaaaatggtcactttgatccctgaaccaaaaatcaatatccctcaattgaatctcaaatccctaaatca 43461589  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||||||| |||    |||||| ||||||||| |||  ||||||| ||||| ||||||||||||    
T  43461588 ctaaatctcaaacccc----tgtcatctaattctct-tttcgttcaaaatcaatcatccattaaacac 43461526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 45584467 - 45584277
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | |||||| ||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  45584467 atgaggtgtcataaggaccaaagtgaatgtagaaaatggtcactttggtccctgaaccaaaa-tcaatattcccaaattgaatatcaaattcctaaatcc 45584369  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
     ||||||||||||||||| ||||||| ||||| ||| ||||  |||||| |||||||||||||||||   || |||| |||||| |||||||    
T  45584368 ttaaatctcaaatccctaaatgtcatctaattatcttttttgatcaaaatcaatcttccattaaacatcaacctactgttaggtccctgact 45584277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 32793293 - 32793432
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacatg--aagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| |||||| ||||||||| ||||| ||||||| ||||| |||||||  | ||||||||||||||| ||||||||||||||||| ||| |||||||    
T  32793293 ataattatgttaactgatgatgtggcacacgttttacaatgacatgacatgtgaggtgtcacatggactaaagtgaaagtaaaaaatgatcattttggtc 32793392  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaat 147  Q
    |||||| ||||| | |||||||  ||| ||||||| ||||    
T  32793393 cctgaatcaaaaatgaatatccctaaaatgaatctcaaat 32793432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 43457620 - 43457788
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||||||  ||||| ||||||||||||||||||||||||||||||||| | ||||| | |||||||  ||||||||||| |||||  ||||||     
T  43457620 atgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctg-accaaaaatcaatatccctaaattgaatctcaaatccttaaatca 43457718  T
Q  158 ctaaatctcaaatccctatatgtcatttaat--tctctattttattcaaaaacaatcttccattaaacac 225  Q
    | |||||||||| ||||| || |||| ||||  ||||| |||| ||||||| ||||| || |||||||||    
T  43457719 ccaaatctcaaacccctaaatatcatctaattctctctcttttgttcaaaatcaatcatcaattaaacac 43457788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 256
Target Start/End: Complemental strand, 34710402 - 34710164
Alignment:
Q  12 aattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccc 109  Q
    |||| |||||||||||||||| ||| | ||| || |||||||||||||  || ||||||||  ||||| |||||||||||||||| || |||||| ||||    
T  34710402 aattatgttaagtgatgatgtagcataggttatatgatgacgtgacatttgatgtgtcacagagactaaagtgaaagtaaaaaattgttactttgatccc 34710303  T
Q  110 tgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaaca 209  Q
    |||| ||||| | || ||||| ||||||||| |||       |||| ||||||| |||||||| || ||||||| ||||||||| |||| |||||||  |    
T  34710302 tgaatcaaaaatcaacatcctcaaattgaatttta-------aaat-cctaaatttcaaatccttaaatgtcatctaattctctcttttgttcaaaatta 34710211  T
Q  210 atcttccattaaacacacacttactattaggttcctgactatacata 256  Q
    || || |||||||||   | ||||| ||||||  |||||||||||||    
T  34710210 atttttcattaaacatcaatttactgttaggtatctgactatacata 34710164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 6680534 - 6680324
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgaca--tgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||||||||||| ||||||  || || |||||||||||| |||||  ||| |||||| | |||||| |||||||||| ||||| |||| ||| |||    
T  6680534 ataattctgttaagtgctgatgtgacataaattttacgatgacatgacaattgatgtgtcaaagggactaaagtgaaagtagaaaatagtcattttagtc 6680435  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    ||| || ||||| | |||||||  |||||||||        | ||||| | ||||||||||||||||| || |||| ||||||||| |||| |||||||     
T  6680434 cctaaaccaaaaatcaatatccccaaattgaat--------tttaaattcataaatctcaaatccctaaatatcatctaattctctcttttgttcaaaat 6680343  T
Q  208 caatctt-ccattaaacac 225  Q
    ||||||| |||||||||||    
T  6680342 caatcttcccattaaacac 6680324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 39708281 - 39708464
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||||||||||||  |||||||||| |||||||||||||||| |||| || ||||| | ||||| || |||||||||        |  ||||||    
T  39708281 atgatgtgtcacatggactgtagtgaaagtagaaaatggtcactttggaccctaaaccaaaaatcaatattctcaaattgaat--------ttcaaatcc 39708372  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||||| |||| | || ||||||| ||||||||| |||| ||||||| | |||||||||||||||   ||||||| |||||| |||||||    
T  39708373 ctaaatcttaaattcttaaatgtcatctaattctctcttttgttcaaaatcgatcttccattaaacattaacttactgttaggtccctgact 39708464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 44333289 - 44333457
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| |  ||||||||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  44333289 atgaggtgtcacagggaccaacgtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatcc 44333388  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
     ||||||||||||||||| || |||  |||||||||  ||| ||||| |  |||||||||  |||||||    
T  44333389 ttaaatctcaaatccctaaatttcaactaattctctcatttgttcaagattaatcttccaacaaacaca 44333457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 12221486 - 12221601
Alignment:
Q  91 aaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattc 190  Q
    ||||||||| ||||||||||||| ||||  | |||||||  ||||||||| | |||| |||||||||||||||||||| || ||| ||||||| ||||||    
T  12221486 aaatggtcaatttggtccctgaaccaaagatcaatatccccaaattgaatatcaaatttctaaatccctaaatctcaattctctaaatgtcatctaattc 12221585  T
Q  191 tctattttattcaaaa 206  Q
    ||| |||| |||||||    
T  12221586 tctcttttgttcaaaa 12221601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 33607465 - 33607368
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    |||| |||||| |||||||| |||||||||||||| ||||||||||||||| || | ||||| | |||||||  ||||||||||||||||| ||||||    
T  33607465 atgaggtgtcaaatggactaaagtgaaagtaaaaattggtcactttggtccttggaccaaaaatcaatatccccaaattgaatcttaaatccctaaat 33607368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 35729045 - 35728900
Alignment:
Q  70 atggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaa 169  Q
    |||||| | |||||||||| ||| |||||||||||||||||||| ||||| | ||||| |  ||||||||| |||||||        ||||||||| |||    
T  35729045 atggaccaaagtgaaagtagaaagtggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatattaaatc--------cctaaatcttaaa 35728954  T
Q  170 tccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaac 223  Q
    ||| || ||||||| ||||| ||| |||| ||||||| ||||||||||||||||    
T  35728953 tccttaaatgtcatctaattatctcttttgttcaaaatcaatcttccattaaac 35728900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 7259655 - 7259498
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | ||||||| || |||||||||||||||||||||||| ||||| |||||||||  |||||||||     |||   ||||||    
T  7259655 atgaggtgtcacaaggaccaaagtgaaa-tagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaat-----atc---aaatcc 7259565  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaaca 224  Q
    |||||||| |||||| || ||||| | ||||| ||| ||||  |||||| |||||||| ||||||||    
T  7259564 ctaaatcttaaatccttaaatgtcctctaattatcttttttgctcaaaatcaatcttctattaaaca 7259498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 225
Target Start/End: Complemental strand, 30924959 - 30924821
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatat 178  Q
    |||||||||| ||||||||||||||| ||  |||| ||||| | |||||||  |||||||||     |||   |||||||||||||| |||||| || ||    
T  30924959 agtgaaagtagaaaatggtcactttgatctatgaaccaaaaatcaatatccccaaattgaat-----atc---aaatccctaaatcttaaatccttaaat 30924868  T
Q  179 gtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    ||||| ||||| ||| |||| ||||||| ||||||||||||||||||    
T  30924867 gtcatctaattatcttttttgttcaaaatcaatcttccattaaacac 30924821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 45583832 - 45583936
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgactat 251  Q
    |||||||||||||| |||||| |  ||||||| ||||| ||| ||||  |||||| ||||||||||||||||||  ||||||| |||||| |||||||||    
T  45583832 aaatccctaaatcttaaatcctttaatgtcatctaattatcttttttgatcaaaatcaatcttccattaaacaccaacttactgttaggtccctgactat 45583931  T
Q  252 acata 256  Q
     ||||    
T  45583932 gcata 45583936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 10894500 - 10894662
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    |||||||||| || | |||||||||| |||||||||||||| ||||||| | |||||  | ||||||  ||||||||| | ||||| ||||||||  |||    
T  10894500 gtgtcacatgcaccaaagtgaaagtagaaaatggtcactttagtccctggaccaaaa-atcatatccccaaattgaatatcaaatccctaaatccgaaaa 10894598  T
Q  163 tctcaaatccctatatgtcatttaat-tctctattttattcaaaaacaatcttccattaaacac 225  Q
    ||| |||| | || ||||||| |||| ||| | |||| ||||||| |||||||| |||||||||    
T  10894599 tcttaaattcttaaatgtcatctaatatctttttttttttcaaaatcaatcttctattaaacac 10894662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 241
Target Start/End: Complemental strand, 44334415 - 44334246
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaat 163  Q
    |||||||||||| | |||||||||| ||||| ||||||||||||| |||| ||||| | |||||||  |||||||||     |||   ||||||||||||    
T  44334415 tgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaat-----atc---aaatccctaaat 44334324  T
Q  164 ctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    || |||| | || ||||||| ||||| ||| |||| ||||||| || | || ||||||||||  || |||||||||||    
T  44334323 cttaaattcttaaatgtcatctaattatctcttttgttcaaaatcattatttcattaaacaccaacctactattaggt 44334246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 34707723 - 34707943
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgac-gtgacatgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtcc 108  Q
    |||||| |||||| |||| |||||||||| ||| ||||||||| | ||  ||| |||||||| ||| || ||||||| || ||||||  ||||||| |||    
T  34707723 ataattttgttaaatgataatgttgcacaggttatacgatgacagggatttgatgtgtcacagggaataaagtgaaaatagaaaatgaacactttgttcc 34707822  T
Q  109 ctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaac 208  Q
     || | ||||| |||||||||  || |||||| | ||||        ||||||||||||||| | || ||||||| ||||||||| |||| ||||||| |    
T  34707823 atggaccaaaaattaatatccccaagttgaatttcaaat--------ccctaaatctcaaattcttaaatgtcatataattctctcttttgttcaaaatc 34707914  T
Q  209 aatcttcca-ttaaacacacacttactat 236  Q
    ||| ||||| ||||||||  |||||||||    
T  34707915 aattttccatttaaacaccaacttactat 34707943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 48777409 - 48777534
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatat-cctaaaattgaatcttaaatctctaaatc 156  Q
    |||| |||||||| |||| | ||||||| || ||||||||||||||| | |||||| ||||| | ||||| || |||||||||| | ||||| |||||||    
T  48777409 atgaggtgtcacagggaccaaagtgaaaatagaaaatggtcactttgattcctgaaccaaaa-tcaatatccccaaaattgaatttcaaatccctaaatc 48777507  T
Q  157 cctaaatctcaaatccctatatgtcat 183  Q
    ||||||| | |||||| || |||||||    
T  48777508 cctaaattttaaatccttaaatgtcat 48777534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 2677094 - 2677178
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatc 148  Q
    |||||||||||||| |||||||||| |||||| |||||||| ||||||||  |||| | |||||||  ||||| ||||| |||||    
T  2677094 tgtcacatggactaaagtgaaagtagaaaatgatcactttgttccctgaactaaaaatcaatatccctaaattaaatctcaaatc 2677178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 24934953 - 24935045
Alignment:
Q  62 agtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaa 154  Q
    ||||||||||| |||| |||||||||| ||||||||||||||| ||||| || | ||| | ||||| |  ||||||||||| ||||| |||||    
T  24934953 agtgtcacatgaactaaagtgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatattcctaaattgaatctcaaatccctaaa 24935045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 33061081 - 33061161
Alignment:
Q  159 taaatctcaaatccctatatgtcatttaattctctattttattcaaaaaca-atcttccattaaacacacacttactatta 238  Q
    ||||||| ||||||||| |||| |||||||| ||| |||| ||||||| || ||||||||||||||||  |||||||||||    
T  33061081 taaatcttaaatccctaaatgttatttaattatctcttttgttcaaaatcatatcttccattaaacaccaacttactatta 33061161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 33607385 - 33607297
Alignment:
Q  161 aatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||| ||||||||| ||||||| ||||||||| |||| || |||| || |||||||||||||||  || |||| |||||| |||||||    
T  33607385 aatcttaaatccctaaatgtcatctaattctctcttttgtttaaaatcattcttccattaaacacctacctactgttaggtccctgact 33607297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 39824300 - 39824356
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||| | |||||||    
T  39824300 catgaagtgtcacagggactaaagtgaaagtagaaaatggtcactttagcccctgaa 39824356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 32794657 - 32794575
Alignment:
Q  167 aaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||||||  ||||||| |||| |||| |||| ||||||| |||| |||||||||||||| ||||| | |||||| |||||||    
T  32794657 aaatccctgaatgtcatctaatgctctcttttgttcaaaatcaattttccattaaacacaaacttattgttaggtccctgact 32794575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 44530567 - 44530517
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcc 129  Q
    |||||||||||||| |||||||||| ||||||||| ||||| |||||||||    
T  44530567 agtgaaagtaaaaactggtcactttagtccctgaaccaaaaattaatatcc 44530517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 42478220 - 42478127
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatcc 172  Q
    |||||||||| ||||||||||||||||||| ||||  |||| | |||||||   |||||||| | ||||| ||||| || ||||||| ||||||    
T  42478220 agtgaaagtagaaaatggtcactttggtccatgaacaaaaaatcaatatcccctaattgaatatcaaatccctaaacccataaatcttaaatcc 42478127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 46287323 - 46287215
Alignment:
Q  91 aaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattc 190  Q
    |||| |||||||| |||||| || ||||| | ||||| |  ||||||||||  ||||| |||||||| |||||||||||| | || ||||||| ||||||    
T  46287323 aaatagtcactttagtccctaaatcaaaaatcaatattcctaaattgaatc--aaatccctaaatccttaaatctcaaat-cttaaatgtcatctaattc 46287227  T
Q  191 tctattttattc 202  Q
    ||| ||||||||    
T  46287226 tcttttttattc 46287215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 48249680 - 48249775
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatg--acgtgacatgaagtgtcacatggactacagtgaaagtaaaaaatggtcacttt 103  Q
    |||||| ||||||||||||||||  ||||| ||||||||||  | || | |||| |||||||||| |||| ||| |||||| | ||||||||||||    
T  48249680 ataattatgttaagtgatgatgtgacacaaattttacgatgatatgtcatatgaggtgtcacatgaactaaagtaaaagtagagaatggtcacttt 48249775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 8375569 - 8375503
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcc 129  Q
    ||||||||  ||||| |||||||||| |||||||||||||| |||||| || ||||| | |||||||    
T  8375569 gtgtcacagagactaaagtgaaagtagaaaatggtcactttagtccctaaaccaaaaatcaatatcc 8375503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 8047072 - 8047145
Alignment:
Q  151 taaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaaca 224  Q
    ||||||||||||||||||||| ||| || |||| ||||| ||| |||| ||||| | |||| || |||||||||    
T  8047072 taaatccctaaatctcaaatcactaaatatcatctaattatctcttttgttcaatatcaatatttcattaaaca 8047145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 12220144 - 12220193
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat 59  Q
    |||||| ||||||||||||||||  |||| ||||||||||||| ||||||    
T  12220144 ataattttgttaagtgatgatgtgacacatgttttacgatgacatgacat 12220193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 24935657 - 24935608
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    ||||||| |||||| |||||||||||||||  ||||||||| ||||||||    
T  24935657 tgtcacaaggactaaagtgaaagtaaaaaaatgtcactttgatccctgaa 24935608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 32793423 - 32793484
Alignment:
Q  161 aatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaa 222  Q
    |||||||||| |||  ||||| | |||||||||||||| ||||||| ||||||| |||||||    
T  32793423 aatctcaaatacctgaatgtcttctaattctctattttgttcaaaatcaatctttcattaaa 32793484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 25621672 - 25621628
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactt 102  Q
    ||||||||| ||| |||||| |||||||||| |||||||||||||    
T  25621672 atgaagtgtaacaaggactaaagtgaaagtagaaaatggtcactt 25621628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 17700671 - 17700868
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||||||||||||||||||||||  |||| | ||||  | |||||||||| | ||||  |||||| |    
T  17700671 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaataatccaaaattgaatatcaaattcctaaattc 17700770  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgactatacata 256  Q
     |||||||||||||| || ||||||| |||||||||||||| |||||||  |||||||||||||||||| ||||||| |||||| ||||||| ||||||    
T  17700771 ttaaatctcaaatccttaaatgtcatataattctctattttgttcaaaattaatcttccattaaacaca-acttactgttaggtccctgactgtacata 17700868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 55389440 - 55389250
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| | ||| | ||||| |  ||||||||| | ||||  ||||||||    
T  55389440 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatattcccaaattgaatatcaaattcctaaatcc 55389341  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
     ||||||||||||||||| ||||||| ||||||||| |||| |||||||  ||| |||||||||||||| ||||||| |||||| |||||||    
T  55389340 ttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatattccattaaacaca-acttactcttaggtccctgact 55389250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 48573137 - 48573337
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||||||||||||| ||| |||| ||||| | ||||| | |||||||||| | ||||  |||||| |    
T  48573137 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaattc 48573236  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca--cacttactattaggttcctgactatacat 255  Q
     ||||||||||||||||| ||||||| ||||||||| ||||||||||||  || |||||||||||||||   ||||||| |||||| ||||||| |||||    
T  48573237 ttaaatctcaaatccctaaatgtcatctaattctctcttttattcaaaattaaccttccattaaacacaacaacttactgttaggtccctgactgtacat 48573336  T
Q  256 a 256  Q
    |    
T  48573337 a 48573337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 48574430 - 48574263
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||| |||| |||| ||||| | |||||||  ||||||||| | ||||||||||||||    
T  48574430 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttagtccttgaaccaaaattcaatatccccaaattgaatatcaaatctctaaatcc 48574331  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||| |||||| || ||||||| ||||| ||| |||| ||||||| ||||| ||||||||||||    
T  48574330 ctaaatcttaaatccttaaatgtcatataattatcttttttgttcaaaatcaatcatccattaaacac 48574263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 36280288 - 36280098
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | | |||||| | |||||||||||||| |||||| || ||||| | ||||| |  ||||||||| | ||||  ||||||||    
T  36280288 atgaggtgtcacacggaccaaaatgaaagaagaaaatggtcactttagtccctaaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatcc 36280189  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
     ||||||||||||||||| ||||||||||||||||| |||| |||||||  |||||||||||||||||| ||||| | |||||| |||||||    
T  36280188 ttaaatctcaaatccctaaatgtcatttaattctctcttttgttcaaaattaatcttccattaaacaca-acttaatgttaggtccctgact 36280098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 2591777 - 2591941
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattg-aatcttaaatctctaaatc 156  Q
    |||| ||||||||||||||| |||||||||||||||| | |||||||||||||||| ||||| | ||||||   |||||| ||||| ||||  ||||||     
T  2591777 atgaggtgtcacatggactaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatctcgaaattgaaatctcaaattcctaaatt 2591876  T
Q  157 cctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaa 221  Q
    | ||||||||||||| ||| ||||||| ||||||||| |||| ||||||| ||||| ||||||||    
T  2591877 cttaaatctcaaatctctaaatgtcatctaattctctcttttgttcaaaatcaatcatccattaa 2591941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 55388211 - 55388404
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| ||||| | |||||||  ||||||||| | ||||| |||||| |    
T  55388211 atgatgtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaattc 55388310  T
Q  158 ctaaatctcaaatccctatatgtcatttaat--tctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||||| |||||| || ||||||| ||||  ||| | |||| ||||||| |||| ||| |||||||||  || |||| ||| ||||||||||    
T  55388311 ctaaatcttaaatccttaaatgtcatctaattatcttttttttgttcaaaatcaatattctattaaacaccaacctactgttaagttcctgact 55388404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 48809626 - 48809459
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||||| |||||||||| ||||||||||||||| ||| |||| ||||| | ||||| |  ||||||||| | ||||  |||||| |    
T  48809626 atgaggtgtcagaaggactaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattcctaaattgaatatcaaattcctaaatac 48809527  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
     ||||||||||||||||| ||||||| |||||||||||||| ||| |||  ||||||||||||||||||    
T  48809526 ttaaatctcaaatccctaaatgtcatctaattctctattttgttc-aaattaatcttccattaaacaca 48809459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 36279104 - 36279287
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| |||||   |||||||  |||||||||     |||   ||||||    
T  36279104 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaaaaatatccccaaattgaat-----atc---aaatcc 36279195  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||||| |||||| || | ||||| ||||| ||| |||| ||||||| ||||||||||||||||||  || |||| |||||| |||||||    
T  36279196 ctaaatcttaaatccttaaaagtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccctgact 36279287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 53959065 - 53958905
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaat 163  Q
    ||||||| |||| | |||||||||| ||||| |||||||||| ||||||| ||||| | ||||| |  ||||||||| | ||||  |||||||| |||||    
T  53959065 tgtcacagggaccaaagtgaaagtagaaaattgtcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaat 53958966  T
Q  164 ctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
    ||||||| | || ||||||| ||||||||| |||| ||| |||  ||||||||||||||||||    
T  53958965 ctcaaat-cttaaatgtcatctaattctctcttttgttc-aaattaatcttccattaaacaca 53958905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 52318288 - 52318129
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| || | | |||||||||| ||||||||||||||||||| |||| |||||   |||||||  |||||||||     |||   ||||||    
T  52318288 atgaggtgtcacaaggtccaaagtgaaagtagaaaatggtcactttggtccatgaaccaaaaaacaatatccccaaattgaat-----atc---aaatcc 52318197  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||| |||||| || ||||||| ||||| ||| |||| ||||||| ||||||||||||||||||    
T  52318196 ctaaatcttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacac 52318129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 20464191 - 20464339
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||| ||||||||||||||||||  |||| |||||||||| || ||||||  || || |||||  ||||| | |||||||| ||||||||||||||||||    
T  20464191 ataactctgttaagtgatgatgtgacacatgttttacgataacatgacatacgaggtatcacagagactaaaatgaaagtagaaaatggtcactttggtc 20464290  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    | |||| ||||| | |||||||  || ||||| || ||||| |||||||    
T  20464291 catgaatcaaaaatcaatatccccaatttgaacctcaaatccctaaatc 20464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 47428549 - 47428457
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    ||||||||||||||| ||||||||||  ||||||||||||| ||||||||| ||||| ||||||| |  || |||||||| ||||| ||||||    
T  47428549 gtgtcacatggactaaagtgaaagtaggaaatggtcactttagtccctgaaccaaaaattaatattcataacttgaatctcaaatccctaaat 47428457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 3694076 - 3693996
Alignment:
Q  73 gactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaa 153  Q
    ||||| |||||||||| ||||||||||||||| ||||||||  |||| ||||| |||| ||||||||||| ||||| ||||    
T  3694076 gactaaagtgaaagtacaaaatggtcactttgatccctgaataaaaaattaatctcctcaaattgaatctcaaatccctaa 3693996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 52317158 - 52317234
Alignment:
Q  150 ctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
    |||||||| ||||| ||| ||||||| ||||||| ||||||||| |||| |||||||  ||||||||||||||||||    
T  52317158 ctaaatccttaaatttcatatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacaca 52317234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 48808524 - 48808622
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    |||| ||||||||  ||| | |||||||||| |||||||||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||| |||||||    
T  48808524 atgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaatccctaaatc 48808622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 17701861 - 17701708
Alignment:
Q  97 tcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctatt 196  Q
    ||||||||||||||||| ||||| | ||||| |  ||||||||| | ||||| | |||| ||||||||| |||||| || |||||||  |||| ||| ||    
T  17701861 tcactttggtccctgaagcaaaaatcaatattcccaaattgaatatcaaatcccaaaattcctaaatcttaaatccttacatgtcatacaattatctttt 17701762  T
Q  197 ttatt-caaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    || ||  ||||  |||||||||||||||||  || |||| |||||| |||||||    
T  17701761 ttgttataaaattaatcttccattaaacaccaacctactgttaggtccctgact 17701708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 33427888 - 33427973
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatc 148  Q
    ||||||||||||||| |||||||||| |||||  ||||||| | ||||||| ||||| | |||||||  || ||||||||||||||    
T  33427888 gtgtcacatggactaaagtgaaagtagaaaattatcactttagcccctgaaccaaaaatcaatatccccaacttgaatcttaaatc 33427973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 19114670 - 19114760
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaa 154  Q
    |||||||| |||||| |||||||||| ||||||||||||||  |||||||| ||||| | |||||||  || |||||||| ||||| |||||    
T  19114670 gtgtcacaaggactaaagtgaaagtagaaaatggtcactttaatccctgaatcaaaaatcaatatcc-caacttgaatctcaaatccctaaa 19114760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 33837338 - 33837424
Alignment:
Q  81 tgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctca 167  Q
    |||||||| |||||||||||||||||||||||| ||||| | |||||||  | ||||||| | |||||  ||| || ||||||||||    
T  33837338 tgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccagattgaatttcaaatccttaagtctctaaatctca 33837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 612336 - 612464
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtg--acatgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||||||||  |||  ||||||||||||| ||  |||||| ||||||||  ||||| |||||||||| |||||| ||| |||   |    
T  612336 ataattatgttaagtgatgatgtgacacgtgttttacgatgacatgacacatgaggtgtcacagagactaaagtgaaagtagaaaatgatcaatttaacc 612435  T
Q  108 cctgaaacaaaagttaatatcctaaaatt 136  Q
    | |||| ||||| | ||||||| ||||||    
T  612436 catgaaccaaaaatcaatatcccaaaatt 612464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 47075326 - 47075245
Alignment:
Q  74 actacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    |||| ||| |||||| ||||| |||||||| ||||||||| ||||| | |||||||  || |||||||||||||| ||||||    
T  47075326 actaaagttaaagtagaaaattgtcactttagtccctgaaccaaaaatcaatatccccaacttgaatcttaaatccctaaat 47075245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 19115133 - 19115021
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    ||||||||||||||| |||||||||| |||||   |||||| |||| ||||  |||| | |||||||  || |||||| | | ||| | |||||| ||||    
T  19115133 gtgtcacatggactaaagtgaaagtagaaaataaccactttagtccatgaactaaaaatcaatatccccaatttgaatatcatatccccaaatccttaaa 19115034  T
Q  163 tctcaaatcccta 175  Q
    |||||||||||||    
T  19115033 tctcaaatcccta 19115021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 45599046 - 45599133
Alignment:
Q  68 acatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    |||||||||| | |||||||| |||||||||||||| || |||||| ||||| | ||||| || || ||||| || ||||| ||||||    
T  45599046 acatggactaaaatgaaagtagaaaatggtcactttagttcctgaaccaaaaatcaatattcttaacttgaaactcaaatccctaaat 45599133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 40317946 - 40318012
Alignment:
Q  82 gaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatc 148  Q
    ||||||| ||||| |||||||||||||||||| ||||| | ||||| | |||||| ||||| |||||    
T  40317946 gaaagtagaaaatagtcactttggtccctgaatcaaaaatcaatattccaaaattaaatctcaaatc 40318012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 33837611 - 33837542
Alignment:
Q  86 gtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    |||||||||||| | ||||||| || || | ||| |||||||||  ||||||||||||||||| ||||||    
T  33837611 gtaaaaaatggttaatttggtctctaaaccgaaaattaatatccctaaattgaatcttaaatccctaaat 33837542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 36827340 - 36827267
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaac-aatcttccattaaaca 224  Q
    |||| |||||||||||||||| || ||||||  ||||||||| |||| ||||||| | |||||| |||||||||    
T  36827340 aaattcctaaatctcaaatccttaaatgtcaactaattctctcttttgttcaaaatcaaatctttcattaaaca 36827267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 40206060 - 40206109
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    ||||||| || ||| |||||||||| ||||||||||||||||||| ||||    
T  40206060 tgtcacaagggctaaagtgaaagtataaaatggtcactttggtccttgaa 40206109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 47118037 - 47117945
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    |||||||| |||||| ||||||| || ||| |||||||||| ||||||||| ||||| | |||||||  || ||||||||  |||| |||||||    
T  47118037 gtgtcacaaggactaaagtgaaaatagaaa-tggtcactttagtccctgaaccaaaaatcaatatccccaacttgaatctcgaatccctaaatc 47117945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 33428421 - 33428329
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    ||||||||  ||||| | ||||||||||||||||||||||| |||||| ||  |||| | ||||||  ||| |||||||| || || ||||||    
T  33428421 gtgtcacaaagactaaaatgaaagtaaaaaatggtcactttagtccctcaacaaaaaatcaatatctcaaacttgaatctcaattccctaaat 33428329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 32898416 - 32898249
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| ||||| | |||||||| ||||||||| | ||||| ||||||||    
T  32898416 atgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatcctcaaattgaatatcaaatccctaaatcc 32898317  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||| | |||||| || ||||||| ||||| ||| |||| ||||| | ||||||||||||||||||    
T  32898316 ctaaattttaaatccttaaatgtcatctaattatcttttttgttcaatatcaatcttccattaaacac 32898249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 5736964 - 5737205
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||||||||  |||| ||||||||||||| ||||||  || |||||||| |||||| ||| |||||| ||| |  |||||||||||    
T  5736964 ataattttgttaagtgatgatgtgacacaggttttacgatgacatgacatatgaggtgtcacaaggactaaagtaaaagtagaaatta-tcactttggtc 5737062  T
Q  108 cctgaaacaaaagttaa-tatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaa 206  Q
    |||||  ||||| | || |||||  ||||||||||| |||||  |||||| |||||||| ||||||||| ||||||| ||||||||  |||| |||||||    
T  5737063 cctgatccaaaaatcaaatatccccaaattgaatctcaaatccttaaatctctaaatctgaaatccctaaatgtcatctaattctccctttttttcaaaa 5737162  T
Q  207 acaatcttccattaaacacacacttactattaggttcctgact 249  Q
      |||||||||||||||||  ||||| | |||||| |||||||    
T  5737163 ttaatcttccattaaacaccaacttattgttaggtccctgact 5737205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 28619498 - 28619321
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    ||||||||||||||| |  ||||||| |||||| |||||||  ||| |||| ||||| | |||||||  ||||||||| | ||||| |||||||||||||    
T  28619498 gtgtcacatggactaaatcgaaagtagaaaatgatcactttaatccatgaaccaaaaatcaatatccccaaattgaatttcaaatccctaaatccctaaa 28619399  T
Q  163 tctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    |  ||||| |||| ||||||| ||||||||| ||||||| |||| ||||||| ||||||||||| ||||||||||||||    
T  28619398 ttgcaaattcctaaatgtcatctaattctcttttttattaaaaatcaatctttcattaaacaca-acttactattaggt 28619321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 5738024 - 5737805
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||||||||||||||||||  |||| | | || |||||| ||||||  || ||||||||||||||| ||| |||||||||||||||||||||||||    
T  5738024 ataattctgttaagtgatgatgtaacacatggtatatgatgacatgacatatgaggtgtcacatggactaaagtaaaagtaaaaaatggtcactttggtc 5737925  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
     || || ||||| | |||||||  |||||||||||         |||||||||||||||||||  ||| ||||||| ||||| ||| |||| |||||||     
T  5737924 tctaaatcaaaaatcaatatccccaaattgaatct--------caaatccctaaatctcaaat--ctaaatgtcatctaattatctcttttgttcaaaat 5737835  T
Q  208 caatcttccattaaacacacacttactatt 237  Q
    |||| ||||||||||||   ||||||||||    
T  5737834 caatattccattaaacatcaacttactatt 5737805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 225
Target Start/End: Complemental strand, 5965436 - 5965226
Alignment:
Q  17 tgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaa 114  Q
    |||||||| |||||||   ||| ||| ||||||||| ||||||  || ||||||||  || || |||||||||| ||||| |||| |||||||  ||||     
T  5965436 tgttaagtaatgatgtgatacatgttatacgatgacatgacatttgatgtgtcacaaagagtaaagtgaaagtagaaaattgtcattttggtctatgaag 5965337  T
Q  115 caaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatctt 214  Q
     |||| | |||||||  ||||||||| | |||||||||||| ||||||||| |||||||||  |||||| ||||| ||| |||| ||||||| |||||||    
T  5965336 taaaaatcaatatccacaaattgaatttcaaatctctaaattcctaaatcttaaatccctaagtgtcatctaattatctcttttgttcaaaatcaatctt 5965237  T
Q  215 ccattaaacac 225  Q
    |||||||||||    
T  5965236 ccattaaacac 5965226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 256
Target Start/End: Original strand, 35177551 - 35177743
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    |||||||| |||| | |||||||||| |||||||| ||||||||||||||| ||||| | | |||||  ||||||||| | ||||| |||||| ||||||    
T  35177551 gtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcagtatccccaaattgaatatcaaatccctaaattcctaaa 35177650  T
Q  163 tctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgactatacata 256  Q
    ||| |||||| || ||||||  ||||| ||| |||| ||||||| |||||||| | |||||||  || || | |||||| ||||||||| ||||    
T  35177651 tcttaaatccttaaatgtcacctaattatcttttttgttcaaaatcaatcttcta-taaacaccaacctattgttaggtccctgactatgcata 35177743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 35178776 - 35178608
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | ||||||| || |||||| ||||||||| ||||||| ||||| | ||||| |  ||||||||| | ||||   |||||||    
T  35178776 atgaggtgtcatagggaccaaagtgaaactagaaaatgatcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcttaaatcc 35178677  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
     ||||||| ||||||||| ||||||| ||||||||| |||| |||||||  ||||||||||||||||||    
T  35178676 ttaaatctaaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacaca 35178608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 1952941 - 1952783
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | |||||||||| |||||||||||||||||||||||| ||||| | ||||| |  |||||||||     |||   ||||||    
T  1952941 atgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaat-----atc---aaatcc 1952850  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaaca 224  Q
    |||||||| |||||| || ||||||| ||||| ||| |||| ||||||| |||||||||||||||||    
T  1952849 ctaaatcttaaatccttaaatgtcatctaattatctcttttgttcaaaatcaatcttccattaaaca 1952783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 41121227 - 41121374
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||||| |||||||| ||||||||  ||||||||||||| ||| ||  || |||| ||| || ||| |||||||||| ||||| ||||||||||||    
T  41121227 ataattctgtaaagtgatggtgttgcacgggttttacgatgacatgatatatgaggtgtaacaagggctaaagtgaaagtagaaaattgtcactttggtc 41121326  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    | |||| ||||| | |||||||  ||||||||| | |||||| |||||    
T  41121327 cttgaaccaaaaatcaatatccccaaattgaatttcaaatctttaaat 41121374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 10407555 - 10407388
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | |||||||||| |||||||| ||||| ||| ||||| ||||| | ||||| |  ||||||||| | |||    |||||||    
T  10407555 atgaggtgtcataaggaccaaagtgaaagtagaaaatggttactttagtctctgaaccaaaaatcaatatgcccaaattgaatatcaaagtgttaaatcc 10407456  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    ||||| || |||||| || ||||||| ||||| ||| |||| ||||||| ||||||||||||||||||    
T  10407455 ctaaagcttaaatccttaaatgtcatctaattatctcttttgttcaaaatcaatcttccattaaacac 10407388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 32564503 - 32564347
Alignment:
Q  17 tgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaa 114  Q
    ||||||||||||||||  |||| |||||| |||||| || |||  || ||||||||||||||| ||||| |||| |||||| ||| ||| ||||||  |     
T  32564503 tgttaagtgatgatgtgacacaggttttaggatgacatgccatatgatgtgtcacatggactaaagtgatagtagaaaatgatcattttagtcccttgac 32564404  T
Q  115 caaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatc 171  Q
    ||||| | |||||||    ||||||||| ||||  ||||||||||||||||||||||    
T  32564403 caaaaatgaatatccccgtattgaatctcaaattcctaaatccctaaatctcaaatc 32564347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 30134688 - 30134843
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||| ||||||||||  |||| ||||||||||||| || |||  || ||||||||  ||||| |||||||||| ||||| ||||||||||||    
T  30134688 ataattatgttaggtgatgatgtgacacatgttttacgatgacatgtcatttgatgtgtcacagagactaaagtgaaagtagaaaattgtcactttggtc 30134787  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaat 163  Q
    | | || ||||| | ||||| |  ||||||||| | |||||  ||||||| |||||    
T  30134788 ctttaaccaaaaatcaatattcacaaattgaatttcaaatccttaaatccttaaat 30134843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 45476514 - 45476414
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| |||||| | ||| |||||| |||||||||||||| ||||||||| ||||| | ||||| |  ||||| ||||| ||||||||||||||    
T  45476514 atgatgtgtcatatggaccaaagtaaaagtagaaaatggtcactttagtccctgaaccaaaaatcaatattcccaaattaaatctcaaatctctaaatcc 45476415  T
Q  158 c 158  Q
    |    
T  45476414 c 45476414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 8569559 - 8569661
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    ||||| ||||||||||||||| | |||||| |||||||  ||| |||| ||||||||  |||| | |||||||  ||||||||||| |||||||||| ||    
T  8569559 catgaggtgtcacatggactaaaatgaaaggaaaaaattatcattttgatccctgaactaaaaatcaatatccacaaattgaatctcaaatctctaattc 8569658  T
Q  157 cct 159  Q
    |||    
T  8569659 cct 8569661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 28619111 - 28619223
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgaca--tgaagtgtcacatggactacagtgaaagta-aaaaatggtcactttggt 106  Q
    |||||| ||||||||||||||||  |||| ||||||||||||| || ||  ||| || ||| | |||||| |||||| ||| ||||||||||||||||||    
T  28619111 ataattttgttaagtgatgatgtgtcacatgttttacgatgacatggcatttgatgtatcatagggactaaagtgaatgtagaaaaatggtcactttggt 28619210  T
Q  107 ccctgaaacaaaa 119  Q
    |||| || |||||    
T  28619211 ccctcaatcaaaa 28619223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 41122713 - 41122624
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaat 147  Q
    |||||||||||||| ||||| ||||||| || ||||| ||||||||| |||||||| ||||| | ||||||   ||||||||||| ||||    
T  41122713 atgaagtgtcacattgactaaagtgaaaatagaaaatcgtcactttgatccctgaaccaaaaatcaatatctccaaattgaatctcaaat 41122624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 28524930 - 28525006
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaa 134  Q
    ||||||||||| |||||||| |||||||||||||||| |||| |||||||| |||| | ||| | ||||||| ||||    
T  28524930 atgaagtgtcagatggactaaagtgaaagtaaaaaattgtcattttggtccgtgaaccgaaaatcaatatcccaaaa 28525006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 41754140 - 41754212
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcct 130  Q
    |||| |||||| | |||||| |||||||||||||||| |||||||||||||||||| | ||| | ||||||||    
T  41754140 atgacgtgtcatagggactaaagtgaaagtaaaaaatagtcactttggtccctgaatcgaaaatcaatatcct 41754212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 12637712 - 12637657
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    |||| ||||||||||||||| |||||||||| || ||| |||||||||||||||||    
T  12637712 atgatgtgtcacatggactaaagtgaaagtagaatatgatcactttggtccctgaa 12637657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 41754757 - 41754702
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||||||| ||||    
T  41754757 atgatgtgtcacagggattaaagtgaaagtaaaaaatggtcactttggtccatgaa 41754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 32563828 - 32563906
Alignment:
Q  161 aatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattag 239  Q
    ||||||||||||||| ||| ||| ||||||||| |||| |||||||  ||||||| |||||||||  ||||||| ||||    
T  32563828 aatctcaaatccctaaatgccatctaattctctcttttgttcaaaattaatcttctattaaacactaacttactgttag 32563906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 33315030 - 33315085
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    |||| ||||||||||||| | |||||||||| ||||| ||||||||||||| ||||    
T  33315030 atgaggtgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccgtgaa 33315085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 39138615 - 39138569
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttg 104  Q
    |||| |||||||| |||||| |||||||||| |||||||||||||||    
T  39138615 atgaggtgtcacaaggactaaagtgaaagtagaaaatggtcactttg 39138569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 10406358 - 10406463
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | ||||| |||| ||||| |||||||||||| ||||| ||||| | |||||    ||||||||| | ||||  ||||||||    
T  10406358 atgaggtgtcacagggaccaaagtgatagtagaaaatagtcactttggtctctgaaccaaaaatcaatatttccaaattgaatatcaaattcctaaatcc 10406457  T
Q  158 ctaaat 163  Q
    ||||||    
T  10406458 ctaaat 10406463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 45476355 - 45476395
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaa 119  Q
    |||||||||| ||||| |||||||||||||||||| |||||    
T  45476355 agtgaaagtagaaaattgtcactttggtccctgaaccaaaa 45476395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 51450122 - 51450355
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||| ||||||  |||| ||||||||||||| || |||  || |||||||| |||||| | |||||||| |||||| ||||| | |||    
T  51450122 ataattttgttaagtggtgatgtgacacatgttttacgatgacatgtcatatgaggtgtcacagggactaaactgaaagtagaaaatgatcactatagtc 51450221  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    | |||| ||||| | |||||||  || |||||||| ||||||| ||||  ||||||||||||||| ||  |||||| ||||| ||| |||| |||||||     
T  51450222 catgaaccaaaaataaatatccccaacttgaatctcaaatctcaaaatttctaaatctcaaatccgtaagtgtcatctaattatctcttttgttcaaaat 51450321  T
Q  208 caatcttccattaaacacacacttactattaggt 241  Q
    ||||||||||||||||||  ||||||||||||||    
T  51450322 caatcttccattaaacaccaacttactattaggt 51450355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 6612582 - 6612758
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||||| | | |||||| |||||| ||||||| |||| |||| ||||| | |||||||  ||||||||||| ||||| |||||| |    
T  6612582 atgaggtgtcacagggactaaattcaaagtagaaaatgatcacttttgtccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaattc 6612681  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttact 234  Q
    |||||||||||||||||| ||||||| ||||||||| |||| || |||| ||||||||||||||||||  |||||||    
T  6612682 ctaaatctcaaatccctaaatgtcatctaattctcttttttgtttaaaatcaatcttccattaaacaccaacttact 6612758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 52439613 - 52439804
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||||||||||||| ||||| || ||||| | |||||||| ||||||||| | ||||  ||||||||    
T  52439613 atgatgtgtcacaaggaccaaagtgaaagtagaaaatggtcactttgatccctaaaccaaaaatcaatatcctcaaattgaatatcaaattcctaaatcc 52439712  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||| | |||||| || ||||||| ||||| ||| |||| ||||||| ||||||||||||||||||  || |||| |||||| |||||||    
T  52439713 ctaaattttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccctgact 52439804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 10 - 215
Target Start/End: Complemental strand, 22857580 - 22857372
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||||||||  |||||||||||  ||||| ||||||  || ||||||||||||||| |||||||||| ||| | |||||||||       
T  22857580 ataattatgttaagtgatgatgtgacacaagttttataatgacatgacatatgaggtgtcacatggactaaagtgaaagtagaaactagtcactttgaaa 22857481  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccct-aaatctcaaatccctatatgtcatttaattctctattttattcaaaa 206  Q
     ||||| ||||| | ||||| |  ||||||||||| |||||  ||||||||| |||||||||||||||| || |||| ||||| ||  |||| |||||||    
T  22857480 actgaaccaaaaatcaatatacccaaattgaatctcaaatccttaaatccctaaaatctcaaatccctaaatatcatctaattttcctttttgttcaaaa 22857381  T
Q  207 acaatcttc 215  Q
     ||||||||    
T  22857380 tcaatcttc 22857372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 52440510 - 52440363
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatat 178  Q
    |||||||||| ||||| |||||||||||||||||| ||||| | | ||| |  ||||||||| | ||||  |||||||| ||||||||||||||||| ||    
T  52440510 agtgaaagtagaaaatagtcactttggtccctgaaccaaaaataagtattcccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaat 52440411  T
Q  179 gtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
    ||||| ||||||||| |||| || ||||  |||||| |||||||||||    
T  52440410 gtcatctaattctctcttttgtttaaaattaatctttcattaaacaca 52440363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 32665741 - 32665557
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa-acaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| |||||| | |||||||  |||||||||     |||   |||||    
T  32665741 atgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaacacaaaaatcaatatccccaaattgaat-----atc---aaatc 32665650  T
Q  157 cctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||||||| |||||| || ||||||| ||||| ||| |||| ||||||| |||||||| ||| |||||  || |||| |||||| |||||||    
T  32665649 cctaaatcttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttctattcaacaccaacctactgttaggtccctgact 32665557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 224
Target Start/End: Complemental strand, 34088470 - 34088262
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| |||||||||||||||   |||| ||||||||||||| ||||||  || |||||| | |||||| |||||||||| |||   ||||||||||||    
T  34088470 ataattatgttaagtgatgatgcgacacatgttttacgatgacatgacatttgatgtgtcatagggactaaagtgaaagtagaaatgtgtcactttggtc 34088371  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaa 207  Q
    ||||||  |||| | |||||||  |||||||||        |  ||||||||||||||||||||  || |||| || ||||||||| |||| |||||||     
T  34088370 cctgaacaaaaattcaatatccccaaattgaat--------ttcaaatccctaaatctcaaatcattaaatgttatctaattctctcttttgttcaaaat 34088279  T
Q  208 caatcttccattaaaca 224  Q
     ||||||||| ||||||    
T  34088278 taatcttccactaaaca 34088262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 22856802 - 22856940
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||| ||||  ||||| |||||||||||| || |||  || ||||||||  ||||| |||||||||| |||||| ||||||| ||     
T  22856802 ataattatgttaagtgattatgtgacacaaattttacgatgacatggcatatgaggtgtcaca--gactaaagtgaaagtagaaaatgatcactttagtt 22856899  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatc 148  Q
    |||||| ||||| | |||||||| ||||||||||| |||||    
T  22856900 cctgaaccaaaattcaatatcctcaaattgaatctcaaatc 22856940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 3117771 - 3117918
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgac--atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| |||||| |||||||||  |||| ||||||||||| | ||||  |||| ||||||||  ||||| |||||||||| |||||| ||| ||| |||    
T  3117771 ataattttgttaattgatgatgtgacacatgttttacgatggcatgacatatgaggtgtcacaatgactaaagtgaaagtagaaaatgatcattttagtc 3117870  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    | |||| ||||| |||||||||  ||||||||| | ||||| ||||||    
T  3117871 cttgaaccaaaaattaatatccccaaattgaatatcaaatccctaaat 3117918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 25038053 - 25038149
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaa 154  Q
    |||| |||||||||| |||| |||||||||| |||||  ||||||||||||||||| ||||| | |||||||  ||||||||||| ||||| |||||    
T  25038053 atgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaaa 25038149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 25043265 - 25043361
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaa 154  Q
    |||| |||||||||| |||| |||||||||| |||||  ||||||||||||||||| ||||| | |||||||  ||||||||||| ||||| |||||    
T  25043265 atgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaaa 25043361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 32664678 - 32664821
Alignment:
Q  81 tgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgt 180  Q
    |||||||| ||||| ||||||||||||  |||| ||||| | ||||| |  ||||||||| | ||||  |||||||| ||||||||||||||||| || |    
T  32664678 tgaaagtagaaaatagtcactttggtct-tgaatcaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatct 32664776  T
Q  181 catttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
     |||||||||||| |||| || ||||  |||||| ||||||||||    
T  32664777 gatttaattctctcttttgtttaaaattaatctttcattaaacac 32664821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 7944307 - 7944470
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||||||| ||| | |||||||||| |||||  ||||||||||||||| | ||||| | |||||||  ||||||||| | ||||| |||||| |    
T  7944307 atgaggtgtcacatagaccaaagtgaaagtagaaaattatcactttggtccctggaccaaaaatcaatatccccaaattgaatatcaaatccctaaat-c 7944405  T
Q  158 ctaaat-ctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
     ||||| || |||| |    ||||||| ||||| ||| |||||||||||| ||||||||||||||||||    
T  7944406 ttaaatccttaaatgc----atgtcatctaattatcttttttattcaaaatcaatcttccattaaacac 7944470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 7945444 - 7945377
Alignment:
Q  159 taaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
    ||||||||||||||||| ||||||| ||||||||| |||| |||||||  ||||||||||||||||||    
T  7945444 taaatctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatcttccattaaacaca 7945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 11830060 - 11830150
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaat 147  Q
    ||||| |||||||||||| || |||||||||| |||||||||| |||| |||  ||| ||||| | |||||||||||||||||||| ||||    
T  11830060 catgaggtgtcacatggattaaagtgaaagtagaaaatggtcattttgatcctagaaccaaaaatcaatatcctaaaattgaatctcaaat 11830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 9340996 - 9340891
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||||||||||||||||| ||||| | ||||| |  ||| ||||| | ||||  ||||||||    
T  9340996 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaattcaatattcccaaaatgaatatcaaattcctaaatcc 9340897  T
Q  158 ctaaat 163  Q
    ||||||    
T  9340896 ctaaat 9340891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 9339804 - 9339896
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    ||||||| |||| | |||||||||| |||||||||||||||||| ||||| ||||| | |||||||  ||||||||| | ||||| |||||||    
T  9339804 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 9339896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 9340902 - 9340821
Alignment:
Q  167 aaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||||||||| ||||||| ||||| ||| |||| |||||||  |||||||||||||||||| ||||||| |||||| |||||||    
T  9340902 aaatccctaaatgtcatctaattttctcttttgttcaaaattaatcttccattaaacaca-acttactgttaggtccctgact 9340821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 16249836 - 16249913
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    |||||||||| |||||||||| ||| ||||||||| | ||| | |||||||  ||||||||||||||||| |||||||    
T  16249836 agtgaaagtagaaaatggtcattttagtccctgaaccgaaaatcaatatccctaaattgaatcttaaatccctaaatc 16249913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 1407805 - 1407872
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcct 130  Q
    ||||||||||||||| |||||||||| |||||  |||||||||||| |||| | ||| ||||||||||    
T  1407805 gtgtcacatggactaaagtgaaagtagaaaattatcactttggtccttgaaccgaaaattaatatcct 1407872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 6613930 - 6613833
Alignment:
Q  66 tcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaat 163  Q
    ||||| |||||| ||||||||||  ||||  | |||||| |||||||| ||||| | |||||||  ||||||||||| ||||| |||||||| |||||    
T  6613930 tcacagggactaaagtgaaagtaggaaattattactttgttccctgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaatccttaaat 6613833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 8975337 - 8975382
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccc 109  Q
    ||||||| |||||| |||||||||| ||||||||||||||||||||    
T  8975337 tgtcacagggactaaagtgaaagtagaaaatggtcactttggtccc 8975382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 5782551 - 5782663
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    ||||||||||||||| ||||||| |||||||| ||||||||  ||||| || ||||| | |||||||  ||  | ||||| | ||  |||||||| ||||    
T  5782551 gtgtcacatggactaaagtgaaactaaaaaattgtcactttaatccctaaaccaaaaatcaatatccccaatatcaatctcacattcctaaatccttaaa 5782650  T
Q  163 tctcaaatcccta 175  Q
    || ||||||||||    
T  5782651 tcacaaatcccta 5782663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 25038133 - 25038193
Alignment:
Q  161 aatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaa 221  Q
    ||||||||||||||| | ||||| ||||||| | |||| ||||| ||||||||||||||||    
T  25038133 aatctcaaatccctaaaagtcatataattctttcttttgttcaagaacaatcttccattaa 25038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 25043345 - 25043405
Alignment:
Q  161 aatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaa 221  Q
    ||||||||||||||| | ||||| ||||||| | |||| ||||| ||||||||||||||||    
T  25043345 aatctcaaatccctaaaagtcatataattctttcttttgttcaagaacaatcttccattaa 25043405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 51453652 - 51453576
Alignment:
Q  96 gtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatcc 172  Q
    ||||||||| |||||||| || || | |||||||  ||||||||| | ||||| |||||||| ||||||||||||||    
T  51453652 gtcactttgatccctgaatcataaatcaatatccgcaaattgaatttcaaatccctaaatccttaaatctcaaatcc 51453576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 1001848 - 1001755
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccc 158  Q
    ||||||||||||||| | |||||||||||||  |||| |||| ||| |||| | ||| | ||||||| ||| || |||||||||||||||||||||    
T  1001848 gtgtcacatggactaaaatgaaagtaaaaaaaagtcattttgatccttgaatcgaaa-tcaatatcccaaa-ttaaatcttaaatctctaaatccc 1001755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 7945525 - 7945464
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaa 119  Q
    |||| |||||||| |||  | |||||||||| ||||||||||||||||||||| || |||||    
T  7945525 atgaggtgtcacaaggatcaaagtgaaagtagaaaatggtcactttggtccctaaaccaaaa 7945464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 17330190 - 17330023
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||| | ||| | |||||||  ||||||||||| |||||  |||||||    
T  17330190 atgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatccctaaattgaatctcaaatcattaaatcc 17330091  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||| ||||| ||||  ||||||| ||||||||| |||| ||||||| ||| | ||||||||||||    
T  17330090 ctaaatttcaaacccctgaatgtcatataattctctcttttgttcaaaaccaagcatccattaaacac 17330023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 24458212 - 24458379
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||||||||||||||||||| || ||||| | |||||||| ||||||||| | | ||| ||||||||    
T  24458212 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctcaatcaaaaatcaatatcctcaaattgaatatcagatccctaaatcc 24458311  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||| | |||||| || ||||||| ||||| ||| |||| ||||||| ||||||||||||||||||    
T  24458312 ctaaattttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacac 24458379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 32765089 - 32765280
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||||| |||||||||| ||||||||| |||||||||||||| ||||| | |||||||  ||||||||| | ||||| ||||||||    
T  32765089 atgaggtgtcatagggactaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatcc 32765188  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    |||||| | |||||| || ||||||| ||||| ||| |||| ||||||| |||||||||||||||||   || |||| |||||| |||||||    
T  32765189 ctaaattttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacagcaacctactgttaggtccctgact 32765280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 31090317 - 31090500
Alignment:
Q  66 tcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatct 165  Q
    ||||| |||| | |||||||||| ||||||| | |||||||||||||| ||||| |||||||||  ||||||||| | |||||  ||||||||||||  |    
T  31090317 tcacagggaccaaagtgaaagtagaaaatggccgctttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccttaaatccctaaaatt 31090416  T
Q  166 caaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
     |||||| || ||||||| ||||| ||  |||| ||||||| ||||||||||||||||||  || |||||||||||||||||||    
T  31090417 taaatccataaatgtcatctaattatcccttttgttcaaaatcaatcttccattaaacaccaacctactattaggttcctgact 31090500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 39015157 - 39015325
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| |||||||||| |||||||| |||| ||||| | ||||| |  ||||||||| | ||||  | ||||||    
T  39015157 atgaggtgtcacagggaccaaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattccaaaatcc 39015256  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
    |||||||||||||||||| ||||||| ||||||||| |||| || ||||  ||||||||||||||||||    
T  39015257 ctaaatctcaaatccctaaatgtcatctaattctctcttttgtttaaaattaatcttccattaaacaca 39015325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 7073807 - 7073969
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagtt-aatatcctaaaattgaatcttaaatctctaaatccctaa 161  Q
    |||||||| |||||| || |||| ||||||||| ||||||||||||||||| ||||| || ||||| |  ||||||||||| |||||  |||||| |||     
T  7073807 gtgtcacagggactaaagcgaaaataaaaaatgatcactttggtccctgaaccaaaaattcaatattcctaaattgaatctcaaatccttaaatcactat 7073906  T
Q  162 atctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaaca 224  Q
    |||||||||||||| || |||| ||||||||| |||  ||||||| ||||| |||||||||||    
T  7073907 atctcaaatccctaaatatcatctaattctctctttcgttcaaaatcaatcatccattaaaca 7073969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 40000306 - 40000114
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | |||||||||| |||||| |||||||||||| |||| ||||| | ||||| |  ||||||||| | |||| |||||||||    
T  40000306 atgaggtgtcagagggaccaaagtgaaagtagaaaatgatcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaatttctaaatcc 40000207  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgactat 251  Q
     |||||||||||||| ||  |||||| ||||||||| |||| |||||||  |||||| ||||||||||| |||||||  | ||| |||||||||    
T  40000206 ttaaatctcaaatccataagtgtcatctaattctctcttttgttcaaaattaatctttcattaaacaca-acttactgatcggtccctgactat 40000114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 2911437 - 2911276
Alignment:
Q  79 agtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatat 178  Q
    |||||||||| ||||| |||||||||||| || || ||||| | |||||    ||||||||| | ||||  |||||||| |||||||||||| |||| ||    
T  2911437 agtgaaagtagaaaattgtcactttggtctcttaaccaaaaatcaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaattcctaaat 2911338  T
Q  179 gtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    ||||| ||||||||| |||| |||||||  |||||||||||||||||| ||||||| ||||||    
T  2911337 gtcatctaattctctcttttgttcaaaattaatcttccattaaacaca-acttactgttaggt 2911276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 5914978 - 5914857
Alignment:
Q  63 gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaa 162  Q
    ||||||||  ||||| | |||||||||||||| |||||||| ||||||||| ||||| | |||||||  |  |||||||| |||||||||||||||||||    
T  5914978 gtgtcacagagactaaaatgaaagtaaaaaattgtcactttagtccctgaaccaaaaatcaatatccccagcttgaatctaaaatctctaaatccctaaa 5914879  T
Q  163 tctcaaatccctatatgtcatt 184  Q
    |||||||| |||| ||||||||    
T  5914878 tctcaaattcctaaatgtcatt 5914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 24459425 - 24459243
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||| | |||| | |||||||||| ||||||||||||||| |||||||| ||||| | ||||| |  ||||||||| | ||||   |||||||    
T  24459425 atgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatattcccaaattgaatatcaaattcgtaaatcc 24459326  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
     ||||||| ||||||||| ||||| | ||||| ||| |||| |||||||  |||||| ||||||||||| ||||||| ||||||    
T  24459325 ttaaatctgaaatccctaaatgtcgtctaattatctcttttgttcaaaattaatctttcattaaacaca-acttactgttaggt 24459243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 39016354 - 39016196
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||||||||||| | |||||||||| ||||| |||||||||||||||||| ||||| | ||||| |  ||||||||| |         ||||||    
T  39016354 atgaggtgtcacatggaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatat--------gaaatcc 39016263  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||| |||||| || ||||||| ||||| |||||||| ||| ||||||||||||||||||||||    
T  39016262 ctaaatcttaaatccttaaatgtcatctaattatctattttgttc-aaaacaatcttccattaaacac 39016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 43380696 - 43380821
Alignment:
Q  17 tgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaa 114  Q
    ||||||||||||||||  ||   |||||||||||||| |||||  || |||||||||| |||| |||||||||| ||||||||||||||||||||||||     
T  43380696 tgttaagtgatgatgtgacatgtgttttacgatgacgcgacatatgaggtgtcacatgaactaaagtgaaagtagaaaatggtcactttggtccctgaac 43380795  T
Q  115 caaaagttaatatcctaaaattgaat 140  Q
    ||||| | |||||||  |||||||||    
T  43380796 caaaaatcaatatccccaaattgaat 43380821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 31091498 - 31091318
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| ||||||||  ||| | |||||||||| ||||||||||||||||||  |||| ||||| | ||||| |  | ||||||| | ||||  ||||||||    
T  31091498 atgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtctttgaaccaaaaatcaatattccgagattgaatatcaaattcctaaatcc 31091399  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattag 239  Q
     |||||||||||||| || ||||||| ||||||||| |||| |||||||  |||| | ||||||||||| ||||||| ||||    
T  31091398 ttaaatctcaaatccgtaaatgtcatctaattctctcttttgttcaaaattaatcattcattaaacaca-acttactgttag 31091318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 14704157 - 14704316
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
    |||| |||||||| |||| | |||||||||| ||||| ||||||||||||| |||| ||||| | |||||||  |||||||||     |||   ||||||    
T  14704157 atgaggtgtcacagggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaat-----atc---aaatcc 14704248  T
Q  158 ctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacac 225  Q
    |||||||| |||||| || ||||||| ||||| | | |||| ||||||| ||||||||||||||||||    
T  14704249 ctaaatcttaaatccttaaatgtcatctaattatattttttgttcaaaatcaatcttccattaaacac 14704316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 21732281 - 21732362
Alignment:
Q  72 ggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaa 153  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||  ||||||||||| ||||| ||||    
T  21732281 ggactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatctcaaatccctaa 21732362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 2910275 - 2910443
Alignment:
Q  81 tgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgt 180  Q
    |||||||  |||||| |||||||||||| |||| ||||| | |||||||  ||||||||| |  |||| |||||||| ||||| |||||||| || ||||    
T  2910275 tgaaagtcgaaaatgatcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcgaatccctaaatccgtaaatttcaaatccttaaatgt 2910374  T
Q  181 catttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggttcctgact 249  Q
    ||| || || |||  ||| ||||||| ||||||| ||||||||||  || |||| |||||| |||||||    
T  2910375 catctagttatcttgtttgttcaaaatcaatcttacattaaacaccaacctactgttaggtccctgact 2910443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 7412214 - 7412365
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| |||||||||||||  |  |||| ||||||||||||| || |||  || |||||||| |||||| ||||||| || ||||||||||||||| ||    
T  7412214 ataattatgttaagtgatgacatgacacatgttttacgatgacatggcatatgatgtgtcacaaggactaaagtgaaaatagaaaatggtcactttgttc 7412313  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccct 159  Q
    ||| || |||||   |||||||  ||||||||||| ||||| ||||||||||    
T  7412314 cctcaaccaaaaaacaatatccctaaattgaatctcaaatccctaaatccct 7412365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 32766159 - 32766083
Alignment:
Q  150 ctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacaca 226  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||| |||| |||||||  ||||||||||||||||||    
T  32766159 ctaaatccttaaatctcaaatccctaaatgtcatttaattttctcttttgttcaaaattaatcttccattaaacaca 32766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 17466829 - 17466683
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgac--gtgacatgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||||||||||||||||||||  |||| |||||| ||||||  |  | |||| |||||||| | |||| ||||||||||||||||||||| |||| ||    
T  17466829 ataattctgttaagtgatgatgtgacacatgttttaggatgacaaggcatatgaggtgtcacacgcactaaagtgaaagtaaaaaatggtcaatttgatc 17466730  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    ||| || ||||| |||||||||  ||||| ||| | ||||| ||||||    
T  17466729 cct-aaccaaaaattaatatccctaaattaaatttcaaatccctaaat 17466683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 43381181 - 43381045
Alignment:
Q  21 aagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaa-acaa 117  Q
    |||||||||||| ||||| |||||| ||||||||| |||  || |||||||| |||||| ||| ||| || ||||| |||| ||||||||||||| ||||    
T  43381181 aagtgatgatgtggcacatgttttatgatgacgtggcatatgaggtgtcacaaggactaaagtaaaaatagaaaatagtcattttggtccctgaacacaa 43381082  T
Q  118 aagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    || | |||||||  ||||||||||| ||||| ||||||    
T  43381081 aa-tcaatatccctaaattgaatctcaaatccctaaat 43381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 21733770 - 21733627
Alignment:
Q  12 aattctgttaagtgatgatgttgcacaagttttacgatgacgtgac--atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccc 109  Q
    |||||||||||||||||||||  |||| |||||| | ||||  |    ||||||||||||   ||||| ||||||||||||||||||||||||||||| |    
T  21733770 aattctgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaagtgtcacgatgactaaagtgaaagtaaaaaatggtcactttggtctc 21733671  T
Q  110 tgaaacaaaagttaatatcctaaaattgaatcttaaatctctaa 153  Q
    |||| | ||| | ||||| |  ||||||||||| ||||| ||||    
T  21733670 tgaaccgaaaatcaatattcccaaattgaatctcaaatccctaa 21733627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 17466165 - 17466310
Alignment:
Q  12 aattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccc 109  Q
    |||| ||||||||||||||||  |||  ||||||| ||||| || |||  || |||||||||||| || ||| |||||| |||||| |||||||||| ||    
T  17466165 aattatgttaagtgatgatgtaacactggttttacaatgacatggcatatgaggtgtcacatggattaaagtaaaagtagaaaatgatcactttggttcc 17466264  T
Q  110 tgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaat 155  Q
    | ||  |||| ||||||||   || |||||| |||||| |||||||    
T  17466265 taaactaaaaattaatatctccaatttgaattttaaatttctaaat 17466310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 31814345 - 31814303
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgac 52  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  31814345 ataattctgttaagtgatgatgtgacacaagttttacgatgac 31814303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 31442502 - 31442603
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    ||||| |||||| | |||||| ||||||||| |||||||  ||| |||||||||||| | ||| | |||||||  ||||||||||| ||||| ||| |||    
T  31442502 catgaggtgtcataaggactaaagtgaaagtcaaaaatgaacacattggtccctgaaccgaaaatcaatatccctaaattgaatctcaaatccctatatc 31442601  T
Q  157 cc 158  Q
    ||    
T  31442602 cc 31442603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 14887449 - 14887377
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcct 130  Q
    |||| |||||||| |||||| |||||||||| |||||||||| | |||||||||||  |||| | ||||||||    
T  14887449 atgaggtgtcacagggactaaagtgaaagtagaaaatggtcaatatggtccctgaattaaaaatcaatatcct 14887377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 43380823 - 43380899
Alignment:
Q  165 tcaaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    |||||| |||| ||||| |  ||||||||||||| ||||||| |||| |||||||||||||  ||||||| ||||||    
T  43380823 tcaaattcctaaatgtcgtacaattctctattttgttcaaaatcaatattccattaaacaccaacttactgttaggt 43380899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 33163366 - 33163304
Alignment:
Q  101 tttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaat 163  Q
    ||||||||||||| ||||| | |||||||  ||||||||| | |||||||||||| |||||||    
T  33163366 tttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaatctctaaattcctaaat 33163304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 37607280 - 37607346
Alignment:
Q  64 tgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcct 130  Q
    ||||||| |||||| |||||| ||| ||||| |||||||||||| ||||| ||||| | ||||||||    
T  37607280 tgtcacaaggactaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatatcct 37607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 39256876 - 39256802
Alignment:
Q  167 aaatccctatatgtcatttaattctctattttattcaaaaacaatcttccattaaacacacacttactattaggt 241  Q
    |||||| |||||| ||| ||||||||| |||| ||||||  ||||||||||||||| ||  ||||||| ||||||    
T  39256876 aaatccttatatgacatctaattctctcttttgttcaaagtcaatcttccattaaaaaccaacttactgttaggt 39256802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 31443197 - 31443084
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatc 156  Q
    ||||| ||||||||  ||||| |||||||||| ||||| |||| |||||| |||||| | ||| | ||||||   ||||| ||||| ||||  |||||||    
T  31443197 catgaggtgtcacagtgactaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatctccaaattaaatctcaaattcctaaatc 31443098  T
Q  157 cctaaatctcaaat 170  Q
    |||| ||| |||||    
T  31443097 cctatatcccaaat 31443084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 39257022 - 39256871
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggt- 106  Q
    |||||| ||||||||||||  ||  || | |||||| |||||| ||||||  || |||||| ||| ||||  |||||| || |||||||||||||||||     
T  39257022 ataattatgttaagtgatggcgtgacagatgttttatgatgacatgacatatgatgtgtcatatgaactaatgtgaaattagaaaatggtcactttggtt 39256923  T
Q  107 -ccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatcc 157  Q
      |||||| ||||| ||||||| |   |||||||||| ||||| ||||||||    
T  39256922 ctcctgaaccaaaaattaatattccccaattgaatctcaaatccctaaatcc 39256871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 18676759 - 18676719
Alignment:
Q  73 gactacagtgaaagtaaaaaatggtcactttggtccctgaa 113  Q
    ||||| || ||||||| ||||||||||||||||||||||||    
T  18676759 gactaaagcgaaagtagaaaatggtcactttggtccctgaa 18676719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 26585248 - 26585319
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcct 130  Q
    |||| |||||||| |||||| ||||||| || ||| |||||||||||||||||||| | ||| | ||||||||    
T  26585248 atgaggtgtcacagggactaaagtgaaaatagaaa-tggtcactttggtccctgaaccgaaaataaatatcct 26585319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 31239985 - 31239772
Alignment:
Q  13 attctgttaagtgatgatgttgcacaagttttacgatgacgtgacatgaa--gtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccct 110  Q
    ||||||||||||||||||||  ||||  |||||||||||| ||||||  |  |||||||||| |||| ||| |||||| |||||||||||||| || | |    
T  31239985 attctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagtcaaagtagaaaatggtcacttttgttctt 31239886  T
Q  111 gaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaacaa 210  Q
    ||| ||||| | |||||||  ||||||||||| |||||  |||||||||||||||||||||| || || || | ||||||||| |||| |||||||  ||    
T  31239885 gaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaatatcgtctaattctctcttttgttcaaaattaa 31239786  T
Q  211 tcttccattaaaca 224  Q
    | || |||||||||    
T  31239785 tttttcattaaaca 31239772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 30748162 - 30748234
Alignment:
Q  58 atgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcct 130  Q
    |||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||| | ||||||||    
T  30748162 atgacgtgtcacagggactaaagtgaaagtaaaaaatggtcaatttggtccctgaatcaaaaatcaatatcct 30748234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 19600196 - 19600112
Alignment:
Q  57 catgaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatct 142  Q
    |||||| ||||||| |||||| |||||||||| ||||||||||||||||| ||| || | ||| |||||||||  |||||||||||    
T  19600196 catgaaatgtcacagggactaaagtgaaagtagaaaatggtcactttggt-cctaaatcgaaaattaatatccctaaattgaatct 19600112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 29845764 - 29845838
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaac-aatcttccattaaacac 225  Q
    ||||||||||||| |||||| ||| || |||||||||| ||| |||| ||||||| | ||| |||||||||||||    
T  29845764 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 29845838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 29857029 - 29857103
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaac-aatcttccattaaacac 225  Q
    ||||||||||||| |||||| ||| || |||||||||| ||| |||| ||||||| | ||| |||||||||||||    
T  29857029 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 29857103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 31219142 - 31219101
Alignment:
Q  67 cacatggactacagtgaaagtaaaaaatggtcactttggtcc 108  Q
    ||||||||||| |||||||||| |||||||||||||| ||||    
T  31219142 cacatggactaaagtgaaagtagaaaatggtcactttagtcc 31219101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 79195 - 79368
Alignment:
Q  10 ataattctgttaagtgatgatgttgcacaagttttacgatgacgtgacat--gaagtgtcacatggactacagtgaaagtaaaaaatggtcactttggtc 107  Q
    |||||| ||||||||||||||||  |||| ||||||||||||| ||||||  || || ||||| |||||| | |||||| | |||||| |||||||||||    
T  79195 ataattttgttaagtgatgatgtgacacatgttttacgatgacatgacatatgaggtctcacagggactaaaatgaaagaagaaaatgatcactttggtc 79294  T
Q  108 cctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaatccctaaatctcaaatccctatatgtc 181  Q
    ||||||  |||| | ||||| |  |||||||||||  |||  |||||||| |||||||||||| |||| |||||    
T  79295 cctgaataaaaaatcaatatgcctaaattgaatctcgaattcctaaatccttaaatctcaaatacctaaatgtc 79368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 36473 - 36400
Alignment:
Q  81 tgaaagtaaaaaatggtcactttggtccctgaaacaaaagttaatatcctaaaattgaatcttaaatctctaaa 154  Q
    |||||||| ||||||||||||||| |||||||| | ||| | ||||||||||||||||| || ||||| |||||    
T  36473 tgaaagtagaaaatggtcactttgatccctgaaccgaaaatcaatatcctaaaattgaaactcaaatccctaaa 36400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 1969 - 2043
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaac-aatcttccattaaacac 225  Q
    ||||||||||||| |||||| ||| || |||||||||| ||| |||| ||||||| | ||| |||||||||||||    
T  1969 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 2043  T

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Target: scaffold0237; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 3231 - 3305
Alignment:
Q  152 aaatccctaaatctcaaatccctatatgtcatttaattctctattttattcaaaaac-aatcttccattaaacac 225  Q
    ||||||||||||| |||||| ||| || |||||||||| ||| |||| ||||||| | ||| |||||||||||||    
T  3231 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 3305  T

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