View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5434_high_12 (Length: 280)
Name: NF5434_high_12
Description: NF5434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5434_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 29967199 - 29966954
Alignment:
| Q |
1 |
tgcaaatttggttggagcaaagaggaccgtccattgggacgaattgctacctttttggtaagattatctcctttctctaaaaggtagctttctaatgatt |
100 |
Q |
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| T |
29967199 |
tgcaaatttggttggagcaaagaggaccgtccattgggacgagttgctacctttttggtaagattatctcctttgtctaaaaggtagctttctaatgatt |
29967100 |
T |
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| Q |
101 |
ttaataaaggagagctttctaaaaatatttagatggagatactttttgatatttgttaagaagtgacaagtttattttatcttgctcaaactatttttct |
200 |
Q |
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| T |
29967099 |
ttaataaaggagagctttctaaaaata-----------------tttgatatttgttaagaagtgacaagtttattttatcttgctcaaactatttttct |
29967017 |
T |
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| Q |
201 |
tcaacttcaaaataatactatcttttttcaaacaaatgttatttcttttgctttattggttcc |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29967016 |
tcaacttcaaaataatactatcttttttcaaacaaatgttatttcttttgctttattggttcc |
29966954 |
T |
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