View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5435-Insertion-8 (Length: 350)
Name: NF5435-Insertion-8
Description: NF5435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5435-Insertion-8 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 8 - 340
Target Start/End: Original strand, 27055292 - 27055624
Alignment:
| Q |
8 |
tgacatatacgtattgtttgaggttttctccaaacctctccaagaccagagtcatctaaattgtattctatgaaaaaatcaaccataatcataccctaac |
107 |
Q |
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| T |
27055292 |
tgacatatacgtattgtttgaggttttctccaaacctctccaagaccagagtcatctaaattgtattctatgaaaaaatcaaccataatcatgccctaac |
27055391 |
T |
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| Q |
108 |
ttaagaaaattacaaataacgttaaaactttataacagtaaatatttccttaaatgacaaatactgatttgataggtcaggaaaaatggttaaatcttca |
207 |
Q |
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| T |
27055392 |
ttaagaaaattacaaataacgttaaaactttataacagtaaatatttccttaaatgacaaatactgatttgataggtcaggaaaaatggttaaatcttca |
27055491 |
T |
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| Q |
208 |
tgcaaacgaaagctacaatgatcatacatgcaataatttaaaggattaaaactttgctactttcaaagaatggcctacaaaaaatgaaaacgatgggtta |
307 |
Q |
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| T |
27055492 |
tgcaaacgaaagctacaatgatcatacatgcaataatttaaaggattaaaactttgctactttcaaagaatggcctacaaaaaatgaaaacgatgggtta |
27055591 |
T |
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| Q |
308 |
tatacgacnnnnnnnctttctccaaacgtctct |
340 |
Q |
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| T |
27055592 |
tatacgactttttttctttctccaaacgtctct |
27055624 |
T |
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