View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5435-Insertion-9 (Length: 335)
Name: NF5435-Insertion-9
Description: NF5435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5435-Insertion-9 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 7 - 333
Target Start/End: Original strand, 36290863 - 36291192
Alignment:
| Q |
7 |
aggacctacttcagttttatacaataaagagaatttgtttaaaatagagtgttatagagtgagtgttactagccattatgtttttctcaagagagtttgt |
106 |
Q |
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| T |
36290863 |
aggacctacttcagttttatacaataaagagaatttattgaaaatagtgtgttatagagtgagtgttactaaccattatgtttttctcaagagagtttct |
36290962 |
T |
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| Q |
107 |
cctctctcatattgcatctgttttcttctttatcatctgaaccccacacacatacac--tatctctctctattccaacaacagaaccaagggtgaacata |
204 |
Q |
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| T |
36290963 |
cctctctcatattgcacctgttttcttctttatcatctgaaccccacacacatacacactatctctctctattccaacaacagaaccaagg-tgaacaga |
36291061 |
T |
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| Q |
205 |
tgtaaatctacagcgtctgaaaacaattgcagttaca--gactcaataaaaaggtatacactcttttctttgatgattctgaagttagaaattagactag |
302 |
Q |
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|||| ||| ||||| | ||||| |||||||||||| | || || ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| |
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| T |
36291062 |
tgtacatccacagcttttgaaagcaattgcagttatatagaatctgtaaaaaggtatactctctttgctttgatgattctgaagttagaaattaaactag |
36291161 |
T |
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| Q |
303 |
tagtaattgaaatggttcataaattattatt |
333 |
Q |
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| T |
36291162 |
tagtaatagaaatggttcataaattattatt |
36291192 |
T |
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