View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5438-Insertion-4 (Length: 510)
Name: NF5438-Insertion-4
Description: NF5438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5438-Insertion-4 |
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Alignment Details
Target: chr7 (Bit Score: 459; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 8 - 503
Target Start/End: Complemental strand, 42947263 - 42946768
Alignment:
| Q |
8 |
ctaaagtataccaagaatgaattgcaataatttctattagattagaaatcacacgaaggacataattcatttaaagtcttacatttctattagatgattg |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
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| T |
42947263 |
ctaaagtataccaagaatgaattgcaataatttctattagattagaaatcacacgaaggacataactcatttaatgtcttacatttctattagatgattg |
42947164 |
T |
|
| Q |
108 |
atttgggcgtttcctcttttatctaatggttcatgcctctgtatttttacaggctctatcatggccacaatatacagaatcgtaatttgtttttctttct |
207 |
Q |
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| T |
42947163 |
atttgggcgtttcctcttttatctaatggttcatgcctctgtatttttacaggctctatcatggccacaatatacagaatcgtaatttgtttttctttct |
42947064 |
T |
|
| Q |
208 |
cctataatatgctctttgatgaaagagatcgaactaaataacaaatatcttaaaattacaaaaccaaacggatattcctatccgtacaannnnnnnaata |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
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| T |
42947063 |
cctataatatgctctttgatgaaagagatcgaactaaataacaaatatcttaaaattacaaaaccaaagggatattcctatccgtacaatttttttaata |
42946964 |
T |
|
| Q |
308 |
taatgaaaataaaaaacaccgaaaaatttagtcttgctctgctgtcatatgagctgagctcctacttgtatttgtcattaaagacaagatcttcaaaatc |
407 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42946963 |
ttatgaaaataaaaaacaccgaaaaatttagtcttgctctgctgtcatatgagctgagctcctacttgtatttgtcattaaagacaagatcttcaaaatc |
42946864 |
T |
|
| Q |
408 |
tcatatttaattcatagttaagtaggcatatttattattttccaaatcaaaacccctatcacattagcaagacaaataaatgatcaccttgtgaat |
503 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42946863 |
tcatatttaattcatagttaagtaggcatatttattattttccaaatcaaaacccctatcacattagcaagacaaataaatgatcaccttgtgaat |
42946768 |
T |
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