View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5438-Insertion-6 (Length: 270)
Name: NF5438-Insertion-6
Description: NF5438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5438-Insertion-6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 8 - 270
Target Start/End: Original strand, 45108824 - 45109080
Alignment:
| Q |
8 |
ataatgttgtgatttcaagggattaggaaggtaatgtaactaaa-tatgctaaataaattcagtttataaaaggaagatacaatatagtacagacaaaca |
106 |
Q |
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| T |
45108824 |
ataaagttgtgatttcatgtgattaggaaggtaatgtaactaaaatatgctaaat----tcagtttataaaaggaagataaaatatagtacagacaaaca |
45108919 |
T |
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| Q |
107 |
taaacattaaagcatgcatcttttgcatttagacttgtcacagctaatgttgaagttatccttgtcttgtggaagggatgtaatcatctaaatgcaaaat |
206 |
Q |
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| T |
45108920 |
taaacattaaagcat----cttttgcatttagacttgtcacagctaatgttgaagttatccttgtcttgtggaagggatctaatcatctaaatgcaaaat |
45109015 |
T |
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| Q |
207 |
agacaaagataaaata-tgactaatnnnnnnncataacaatgaagcaacgtgtgtgtccatccac |
270 |
Q |
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| T |
45109016 |
agacaaagataaaatacggactaataaaaaaacataacaatgaagcaacgtgtgtatccatccac |
45109080 |
T |
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