View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5439-Insertion-1 (Length: 257)
Name: NF5439-Insertion-1
Description: NF5439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5439-Insertion-1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 7 - 257
Target Start/End: Original strand, 30627013 - 30627264
Alignment:
| Q |
7 |
attcaatactgtaactttgaccataaataaaggaatcaaagactaaggtaaaatacacacatgaccttaaccgcttttatagtaaaaaattaattattta |
106 |
Q |
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| T |
30627013 |
attcaatactgtaactttgaccataaataaaggaatcaaagactaaggtaaaatacacacatgaccttaaccgcttttatagtaaaaaattaattattta |
30627112 |
T |
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| Q |
107 |
cattaaaaggctgttgccggtgccaccaccaccgtaacaaaaacatgttttaattaataaatgaccttggtattgtaattgtaannnnnnnatcctcctt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
30627113 |
cattaaaaggctgttgccggtgccaccaccaccgtaacaaaaacatgttttaattaataaatgaccttggtattgtaattgtaatttttttatcctcctt |
30627212 |
T |
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| Q |
207 |
aacccaatccaaatactagtattgttcatgt-aaaatattgacaatttctcc |
257 |
Q |
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| T |
30627213 |
aacccaatccaaatactagtagtgttcatgtaaaaatattgacaatttctcc |
30627264 |
T |
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