View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5439_low_7 (Length: 265)
Name: NF5439_low_7
Description: NF5439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5439_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 4862292 - 4862044
Alignment:
| Q |
1 |
aaatttggaaatgtatgttttataaagattactatagtgtgtaatttaatcgtttataatttgttgacgttgtacacatgatggattgaagatatgttcc |
100 |
Q |
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| T |
4862292 |
aaattttgaaatgtatgttttataaagattactatagtgtgtaatttaatcgtttataatttgttgacgttgcacacatgatgcattgaagatatgttcc |
4862193 |
T |
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| Q |
101 |
aggaaaaactccagtctcaaattttaaagtgataatgtctaatattagtttgtaagaatcaatttataaaatcttaacaataagaagaacgtatcaaatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4862192 |
aggaaaaactccagtctcaaattttaaagtgataatgtctaatattagtttgtaagaatcaatttataaaatcttaacaataagaagaacgtatcaaatc |
4862093 |
T |
|
| Q |
201 |
tagtaccatatcaaatcaagccacagttagccaaatgagtgtgatttag |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4862092 |
tagtaccatatcaaatcaagccacagttagccaaatgagtgtgatttag |
4862044 |
T |
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