View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5440-Insertion-4 (Length: 1038)

Name: NF5440-Insertion-4
Description: NF5440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5440-Insertion-4
NF5440-Insertion-4
[»] chr4 (58 HSPs)
chr4 (7-778)||(42460355-42461128)
chr4 (905-940)||(26440674-26440709)
chr4 (905-940)||(34116578-34116613)
chr4 (905-940)||(41119508-41119543)
chr4 (905-939)||(4896538-4896572)
chr4 (905-939)||(46173549-46173583)
chr4 (905-938)||(6370980-6371013)
chr4 (905-938)||(11064127-11064160)
chr4 (905-938)||(11997685-11997718)
chr4 (905-938)||(15596396-15596429)
chr4 (905-938)||(26885291-26885324)
chr4 (905-938)||(37547065-37547098)
chr4 (905-941)||(10994190-10994226)
chr4 (905-941)||(27001447-27001483)
chr4 (905-941)||(34259812-34259848)
chr4 (905-941)||(51359828-51359864)
chr4 (905-940)||(1796364-1796399)
chr4 (905-940)||(13267516-13267551)
chr4 (905-940)||(30973595-30973630)
chr4 (905-940)||(38133978-38134013)
chr4 (908-939)||(51318702-51318733)
chr4 (905-940)||(51377331-51377366)
chr4 (908-939)||(54800997-54801028)
chr4 (905-940)||(55268039-55268074)
chr4 (908-938)||(1031755-1031785)
chr4 (905-939)||(5208365-5208399)
chr4 (905-939)||(6953426-6953460)
chr4 (777-811)||(22257096-22257130)
chr4 (905-943)||(24209825-24209863)
chr4 (905-939)||(25111080-25111114)
chr4 (908-938)||(31240648-31240678)
chr4 (777-811)||(31240786-31240820)
chr4 (777-811)||(36792470-36792504)
chr4 (905-939)||(42490919-42490953)
chr4 (905-939)||(43168752-43168786)
chr4 (905-939)||(46566928-46566962)
chr4 (905-935)||(48326555-48326585)
chr4 (905-939)||(50831794-50831828)
chr4 (905-939)||(51717320-51717354)
chr4 (905-939)||(54036556-54036590)
chr4 (905-938)||(169540-169573)
chr4 (916-945)||(2109436-2109465)
chr4 (905-938)||(7037522-7037555)
chr4 (905-938)||(23347775-23347808)
chr4 (905-938)||(30042134-30042167)
chr4 (908-941)||(31804370-31804403)
chr4 (905-938)||(32365694-32365727)
chr4 (905-938)||(39010175-39010208)
chr4 (905-938)||(39241328-39241361)
chr4 (905-938)||(39684636-39684669)
chr4 (905-938)||(44165909-44165942)
chr4 (912-941)||(45277126-45277155)
chr4 (905-938)||(46794539-46794572)
chr4 (905-938)||(48099811-48099844)
chr4 (905-938)||(51039154-51039187)
chr4 (905-938)||(51389112-51389145)
chr4 (905-938)||(52392263-52392296)
chr4 (905-938)||(56215605-56215638)
[»] chr1 (31 HSPs)
chr1 (905-941)||(31427995-31428031)
chr1 (905-940)||(49425736-49425771)
chr1 (905-939)||(25302681-25302715)
chr1 (905-939)||(49453490-49453524)
chr1 (905-939)||(50226917-50226951)
chr1 (905-938)||(5309078-5309111)
chr1 (905-938)||(32821635-32821668)
chr1 (905-938)||(45740582-45740615)
chr1 (905-937)||(32966268-32966300)
chr1 (905-940)||(39669804-39669839)
chr1 (905-935)||(5477190-5477220)
chr1 (777-811)||(7503603-7503637)
chr1 (905-939)||(9011644-9011678)
chr1 (905-939)||(10384210-10384244)
chr1 (905-939)||(27687546-27687580)
chr1 (905-939)||(40596081-40596115)
chr1 (905-939)||(40612113-40612147)
chr1 (905-939)||(42256459-42256493)
chr1 (905-939)||(45272187-45272221)
chr1 (905-939)||(48325805-48325839)
chr1 (905-939)||(48872378-48872412)
chr1 (777-811)||(48872851-48872885)
chr1 (905-939)||(48872988-48873022)
chr1 (777-810)||(4638063-4638096)
chr1 (905-938)||(13813558-13813591)
chr1 (905-938)||(15061845-15061878)
chr1 (905-938)||(16658438-16658471)
chr1 (905-938)||(25098826-25098859)
chr1 (905-938)||(29264015-29264048)
chr1 (912-941)||(31436817-31436846)
chr1 (905-938)||(41507221-41507254)
[»] chr8 (39 HSPs)
chr8 (905-940)||(5502369-5502404)
chr8 (905-939)||(22852877-22852911)
chr8 (905-939)||(28927680-28927714)
chr8 (905-939)||(45101395-45101429)
chr8 (905-938)||(1796496-1796529)
chr8 (905-938)||(12732842-12732875)
chr8 (777-847)||(45101497-45101567)
chr8 (905-941)||(7279993-7280029)
chr8 (905-940)||(8074762-8074797)
chr8 (908-939)||(8841029-8841060)
chr8 (905-940)||(27836178-27836213)
chr8 (905-940)||(30927969-30928004)
chr8 (908-939)||(32725821-32725852)
chr8 (908-939)||(40842013-40842044)
chr8 (905-939)||(5740812-5740846)
chr8 (905-939)||(6004943-6004977)
chr8 (905-939)||(7678731-7678765)
chr8 (905-939)||(13267124-13267158)
chr8 (905-939)||(20288532-20288566)
chr8 (905-939)||(21075161-21075195)
chr8 (905-939)||(21418630-21418664)
chr8 (905-939)||(26629148-26629182)
chr8 (777-811)||(28570308-28570342)
chr8 (777-811)||(28577901-28577935)
chr8 (905-939)||(30170767-30170801)
chr8 (777-811)||(32175093-32175127)
chr8 (777-811)||(34474088-34474122)
chr8 (905-939)||(44380652-44380686)
chr8 (905-938)||(1065417-1065450)
chr8 (905-938)||(1370312-1370345)
chr8 (905-938)||(7596929-7596962)
chr8 (905-938)||(9047097-9047130)
chr8 (905-938)||(10553121-10553154)
chr8 (905-938)||(16011944-16011977)
chr8 (905-938)||(21273748-21273781)
chr8 (905-938)||(37524455-37524488)
chr8 (905-938)||(38844828-38844861)
chr8 (778-811)||(42543381-42543414)
chr8 (905-938)||(43873729-43873762)
[»] chr5 (37 HSPs)
chr5 (8-63)||(3188921-3188976)
chr5 (905-940)||(6865814-6865849)
chr5 (905-940)||(36713216-36713251)
chr5 (777-811)||(3141633-3141667)
chr5 (905-939)||(23991172-23991206)
chr5 (905-939)||(28811428-28811462)
chr5 (905-938)||(19127124-19127157)
chr5 (905-938)||(34381012-34381045)
chr5 (905-938)||(39595272-39595305)
chr5 (905-940)||(9594476-9594511)
chr5 (905-936)||(12910786-12910817)
chr5 (905-940)||(43057433-43057468)
chr5 (905-939)||(125091-125125)
chr5 (905-943)||(3634489-3634527)
chr5 (777-811)||(3634631-3634665)
chr5 (905-939)||(11768028-11768062)
chr5 (905-939)||(13734387-13734421)
chr5 (905-939)||(14914371-14914405)
chr5 (905-939)||(19376170-19376204)
chr5 (905-935)||(33567250-33567280)
chr5 (908-938)||(36581506-36581536)
chr5 (905-939)||(38500942-38500976)
chr5 (905-938)||(3263546-3263579)
chr5 (905-938)||(8728619-8728652)
chr5 (905-938)||(9599766-9599799)
chr5 (905-938)||(12661985-12662018)
chr5 (905-938)||(12718418-12718451)
chr5 (905-938)||(12779644-12779677)
chr5 (905-938)||(16143390-16143423)
chr5 (905-938)||(28501592-28501625)
chr5 (905-938)||(28903991-28904024)
chr5 (905-938)||(28940386-28940419)
chr5 (905-938)||(30334793-30334826)
chr5 (905-938)||(30574415-30574448)
chr5 (905-938)||(40223823-40223856)
chr5 (905-938)||(41621966-41621999)
chr5 (905-938)||(42699057-42699090)
[»] chr3 (56 HSPs)
chr3 (905-940)||(34607958-34607993)
chr3 (905-939)||(108430-108464)
chr3 (905-939)||(1901964-1901998)
chr3 (905-939)||(1911410-1911444)
chr3 (905-939)||(5398917-5398951)
chr3 (905-939)||(12792637-12792671)
chr3 (905-939)||(18169156-18169190)
chr3 (905-939)||(20215947-20215981)
chr3 (905-939)||(35272026-35272060)
chr3 (906-940)||(41877650-41877684)
chr3 (905-939)||(48945846-48945880)
chr3 (905-938)||(14957836-14957869)
chr3 (905-938)||(20380927-20380960)
chr3 (905-942)||(30796652-30796689)
chr3 (908-941)||(43409403-43409436)
chr3 (905-938)||(51464310-51464343)
chr3 (907-939)||(3483131-3483163)
chr3 (905-941)||(34271528-34271564)
chr3 (905-941)||(34733329-34733365)
chr3 (905-940)||(7294138-7294173)
chr3 (905-940)||(11173456-11173491)
chr3 (905-940)||(24537217-24537252)
chr3 (905-940)||(28300686-28300721)
chr3 (905-940)||(46315993-46316028)
chr3 (905-940)||(47683799-47683834)
chr3 (905-939)||(3069612-3069646)
chr3 (905-939)||(8254026-8254060)
chr3 (908-938)||(9027873-9027903)
chr3 (905-939)||(20714242-20714276)
chr3 (905-939)||(22813071-22813105)
chr3 (905-939)||(26279883-26279917)
chr3 (905-939)||(27528409-27528443)
chr3 (908-938)||(31176481-31176511)
chr3 (777-811)||(31249221-31249255)
chr3 (905-935)||(31997816-31997846)
chr3 (905-939)||(32931956-32931990)
chr3 (905-939)||(35376589-35376623)
chr3 (905-939)||(36818955-36818989)
chr3 (777-811)||(43169654-43169688)
chr3 (905-939)||(43169780-43169814)
chr3 (905-939)||(43176201-43176235)
chr3 (777-811)||(46003844-46003878)
chr3 (905-939)||(46473127-46473161)
chr3 (905-939)||(48405409-48405443)
chr3 (905-939)||(49196695-49196729)
chr3 (905-939)||(49457564-49457598)
chr3 (777-811)||(51650494-51650528)
chr3 (905-939)||(52564672-52564706)
chr3 (905-939)||(53932429-53932463)
chr3 (905-938)||(462439-462472)
chr3 (905-938)||(9719479-9719512)
chr3 (905-938)||(11327108-11327141)
chr3 (905-938)||(32457793-32457826)
chr3 (905-938)||(41309000-41309033)
chr3 (912-941)||(44334846-44334875)
chr3 (905-938)||(50294150-50294183)
[»] chr2 (35 HSPs)
chr2 (905-940)||(6365184-6365219)
chr2 (905-939)||(4738610-4738644)
chr2 (905-939)||(5167780-5167814)
chr2 (905-939)||(15283288-15283322)
chr2 (905-939)||(33296109-33296143)
chr2 (905-939)||(36132973-36133007)
chr2 (905-939)||(42283277-42283311)
chr2 (908-941)||(13553144-13553177)
chr2 (905-938)||(30856807-30856840)
chr2 (905-938)||(36435681-36435714)
chr2 (905-938)||(41040266-41040299)
chr2 (905-941)||(36909881-36909917)
chr2 (905-940)||(37966365-37966400)
chr2 (905-939)||(1889146-1889180)
chr2 (905-939)||(7485458-7485492)
chr2 (905-939)||(8482259-8482293)
chr2 (905-939)||(11229359-11229393)
chr2 (908-938)||(12600048-12600078)
chr2 (905-939)||(29795446-29795480)
chr2 (905-939)||(31296883-31296917)
chr2 (905-939)||(34144589-34144623)
chr2 (905-939)||(35171264-35171298)
chr2 (905-939)||(44189826-44189860)
chr2 (777-811)||(45515499-45515533)
chr2 (912-941)||(546430-546459)
chr2 (905-938)||(4344449-4344482)
chr2 (905-938)||(5455491-5455524)
chr2 (905-938)||(21490703-21490736)
chr2 (912-941)||(23880092-23880121)
chr2 (905-938)||(24727628-24727661)
chr2 (905-938)||(25507255-25507288)
chr2 (905-938)||(25801840-25801873)
chr2 (905-938)||(30487507-30487540)
chr2 (905-938)||(32688582-32688615)
chr2 (905-938)||(45376259-45376292)
[»] scaffold0011 (1 HSPs)
scaffold0011 (905-939)||(219702-219736)
[»] chr7 (36 HSPs)
chr7 (905-939)||(2469702-2469736)
chr7 (777-811)||(7807192-7807226)
chr7 (905-939)||(22330658-22330692)
chr7 (905-939)||(37352017-37352051)
chr7 (905-939)||(41966331-41966365)
chr7 (777-811)||(43260128-43260162)
chr7 (905-942)||(30941174-30941211)
chr7 (905-938)||(31982057-31982090)
chr7 (908-941)||(43079673-43079706)
chr7 (905-941)||(19426577-19426613)
chr7 (905-941)||(25887591-25887627)
chr7 (905-936)||(28596908-28596939)
chr7 (908-939)||(38023465-38023496)
chr7 (905-939)||(156020-156054)
chr7 (905-939)||(4971289-4971323)
chr7 (905-939)||(10591154-10591188)
chr7 (777-811)||(19426717-19426751)
chr7 (777-811)||(28597017-28597051)
chr7 (905-939)||(28824502-28824536)
chr7 (905-939)||(30864455-30864489)
chr7 (905-939)||(31274567-31274601)
chr7 (777-811)||(32154450-32154484)
chr7 (905-939)||(37856192-37856226)
chr7 (777-811)||(40842544-40842578)
chr7 (777-811)||(47424885-47424919)
chr7 (905-939)||(48395247-48395281)
chr7 (905-938)||(2347097-2347130)
chr7 (905-938)||(25200397-25200430)
chr7 (906-939)||(27778078-27778111)
chr7 (905-938)||(28109957-28109990)
chr7 (905-938)||(33050183-33050216)
chr7 (905-938)||(40842405-40842438)
chr7 (910-939)||(42942422-42942451)
chr7 (905-938)||(43444635-43444668)
chr7 (905-938)||(48866968-48867001)
chr7 (905-938)||(49069249-49069282)
[»] chr6 (13 HSPs)
chr6 (905-939)||(30796113-30796147)
chr6 (905-938)||(32457290-32457323)
chr6 (905-937)||(6435037-6435069)
chr6 (905-940)||(9954546-9954581)
chr6 (905-939)||(1897696-1897730)
chr6 (905-939)||(3339537-3339571)
chr6 (905-939)||(11785354-11785388)
chr6 (905-939)||(12441537-12441571)
chr6 (905-939)||(29383556-29383590)
chr6 (905-939)||(31517207-31517241)
chr6 (905-939)||(31883342-31883376)
chr6 (905-939)||(32149499-32149533)
chr6 (905-938)||(2056783-2056816)
[»] scaffold0026 (1 HSPs)
scaffold0026 (905-938)||(113625-113658)
[»] scaffold0131 (1 HSPs)
scaffold0131 (905-937)||(15572-15604)
[»] scaffold0504 (1 HSPs)
scaffold0504 (912-942)||(10780-10810)
[»] scaffold0148 (1 HSPs)
scaffold0148 (905-939)||(9452-9486)
[»] scaffold0130 (1 HSPs)
scaffold0130 (905-939)||(25702-25736)
[»] scaffold0057 (1 HSPs)
scaffold0057 (905-939)||(38878-38912)


Alignment Details
Target: chr4 (Bit Score: 656; Significance: 0; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 656; E-Value: 0
Query Start/End: Original strand, 7 - 778
Target Start/End: Complemental strand, 42461128 - 42460355
Alignment:
Q  7 atatacttggagtgcttgaagaaattcttgctcgagttcaccaacggatttcttctccnnnnnnngatctatgctacaatatgggaggacattggtatcg 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||     
T  42461128 atatacttggagtgcttgaagaaattcttgctcgagttcaccaacggatttcttctcctttttttgatctatgctacaatatgggaggacattggtatca 42461029  T
Q  107 ataacagcatctccgtcaaaatctccaacattccctgaaagaaaaataaaacaagtaacaattagtctctacagatgcgcagcaataatatccaaattac 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  42461028 ataacagcatctccgtcaaaatctccaacattccctgaaagaaaaataaaacaagtaataattagtctctgcagatgcgcagcgataatatccaaattac 42460929  T
Q  207 acacaaaataaaatgaaaaagtgattaaagtaagaccttgttgatctgcagtggctttaggtgaaagtaggaataatctgcggcgaaggcataagtggcg 306  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42460928 acgcaaaataaaatgaaaaggtgattaaagtaagaccttgttgatctgcagtggctttaggtgaaagtaggaataatctgcggcgaaggcataagtggcg 42460829  T
Q  307 ggaattaaggtgacgaggagaaacagaagaaaaagagaatggaatgaagggtgttgggggtgcagaacatggacgagggggtgctaaagtgaaggctact 406  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42460828 ggaattaaggtgaggaggagaaacagaagaaaaagagaatggaatgaagggtgttgggggtgcagaacatggacgagggggtgctaaagtgaaggctact 42460729  T
Q  407 ttggtagcagtgaacatgatgaatggtggcagtgtaactgagaaaatttgagagtagtggttttgtttaatttggagtgttnnnnnnnnnnnnnnnnnnt 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  |    
T  42460728 ttggtagcagtgaacatgatgaatggtggcagtgtaactgagaaaatttgagagtagtggttttgtttaatttggagtgttaaaaaaaatggaaaaaaat 42460629  T
Q  507 gaagagtagtagcttggagataaggcaatgagaacgtgtggagggaaatgcaacggcttattttcatatcgtcgtt--ttgtttatatatcttcacacaa 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  42460628 gaagagtagtagcttggagataaggcaatgagaacgtgtggagggaaatgcaacggcttattttcatatcgtcgtttcttgtttatatatcttcacacaa 42460529  T
Q  605 gtcatcatatttcgttgcttatgtgtatgtgatgacttgtccatctgcgtgctgtggcagtgtggcattttgatttgggcaccatggtgtgttgcgttgg 704  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42460528 gtcatcatatttcgttgcttatgtgtatgtgatgacttgtccatctgcgtgctgtggcagtgtggcattttgatttgggcaccatggtgtgttgcgttgg 42460429  T
Q  705 atttaagcttgacaatggttttatgtcacgtgggcaaatgggtcccacaaataagaaaatgtttcattaagttt 778  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42460428 atttaagcttgacaatggttttttgtcacgtgggcaaatgggtcccacaaataagaaaatgtttcattaagttt 42460355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 26440709 - 26440674
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  26440709 ttgtcacaaagtggttgtacaaatatcatttctcta 26440674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 34116578 - 34116613
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  34116578 ttgtcacaaagtggttgtacaaatatcatttctcta 34116613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 41119508 - 41119543
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  41119508 ttgtcacaaagtggttgtacaaatatcatttctcta 41119543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 4896538 - 4896572
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  4896538 ttgtcacaaagtggttgtacaaatatcatttctct 4896572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 46173583 - 46173549
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  46173583 ttgtcacaaagtggttgtacaaatatcatttctct 46173549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 6371013 - 6370980
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  6371013 ttgtcacaaagtggttgtacaaatatcatttctc 6370980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 11064127 - 11064160
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  11064127 ttgtcacaaagtggttgtacaaatatcatttctc 11064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 11997718 - 11997685
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  11997718 ttgtcacaaagtggttgtacaaatatcatttctc 11997685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 15596429 - 15596396
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  15596429 ttgtcacaaagtggttgtacaaatatcatttctc 15596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 26885324 - 26885291
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  26885324 ttgtcacaaagtggttgtacaaatatcatttctc 26885291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 37547098 - 37547065
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  37547098 ttgtcacaaagtggttgtacaaatatcatttctc 37547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 10994190 - 10994226
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10994190 ttgtcacaaaatggttgtacaaatatcatttctctat 10994226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 27001447 - 27001483
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||| ||||||||||||||||||||||||||    
T  27001447 ttgtcacaaattggttgtacaaatatcatttctctat 27001483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Complemental strand, 34259848 - 34259812
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||| ||||||||||||||||||||||||||    
T  34259848 ttgtcacaaaatggttgtacaaatatcatttctctat 34259812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 51359828 - 51359864
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||| ||||||||||||||||||||||||||    
T  51359828 ttgtcacaaaatggttgtacaaatatcatttctctat 51359864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 1796399 - 1796364
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  1796399 ttgtcacaaattggttgtacaaatatcatttctcta 1796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 13267516 - 13267551
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  13267516 ttgtcacaaaatggttgtacaaatatcatttctcta 13267551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 30973630 - 30973595
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  30973630 ttgtcataaagtggttgtacaaatatcatttctcta 30973595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 38134013 - 38133978
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||||||||||||||||||| |||||||||    
T  38134013 ttgtcacaaagtggttgtacaaatataatttctcta 38133978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 908 - 939
Target Start/End: Complemental strand, 51318733 - 51318702
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||||||||||||||||    
T  51318733 tcacaaagtggttgtacaaatatcatttctct 51318702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 51377331 - 51377366
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  51377331 ttgtcacaaattggttgtacaaatatcatttctcta 51377366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 908 - 939
Target Start/End: Complemental strand, 54801028 - 54800997
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||||||||||||||||    
T  54801028 tcacaaagtggttgtacaaatatcatttctct 54800997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 55268039 - 55268074
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  55268039 ttgtcacaaattggttgtacaaatatcatttctcta 55268074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 908 - 938
Target Start/End: Complemental strand, 1031785 - 1031755
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||||||||    
T  1031785 tcacaaagtggttgtacaaatatcatttctc 1031755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 5208365 - 5208399
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  5208365 ttgtcacaaattggttgtacaaatatcatttctct 5208399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 6953426 - 6953460
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||| ||||||||||||||||||||    
T  6953426 ttgtcacaaagtggatgtacaaatatcatttctct 6953460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 22257096 - 22257130
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  22257096 tttgaacaaccatttcatacaacttttggtgacaa 22257130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 943
Target Start/End: Original strand, 24209825 - 24209863
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctatga 943  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  24209825 ttgtcacaaagtggtcgtataaatatcatttctctatga 24209863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 25111080 - 25111114
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||| ||||||||    
T  25111080 ttgtcacaaagtggttgtacaaatattatttctct 25111114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 908 - 938
Target Start/End: Complemental strand, 31240678 - 31240648
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||||||||    
T  31240678 tcacaaagtggttgtacaaatatcatttctc 31240648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 31240820 - 31240786
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  31240820 tttgaacaaccatttcatacaacttttggtgacaa 31240786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 36792504 - 36792470
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  36792504 tttgaacaaccatttcatacaacttttggtgacaa 36792470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 42490953 - 42490919
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  42490953 ttgtcaaaaagtggttgtacaaatatcatttctct 42490919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 43168752 - 43168786
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  43168752 ttgtcacaaaatggttgtacaaatatcatttctct 43168786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 46566962 - 46566928
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||| ||||||||||||||||||||    
T  46566962 ttgtcacaaagtggatgtacaaatatcatttctct 46566928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 935
Target Start/End: Complemental strand, 48326585 - 48326555
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcattt 935  Q
    |||||||||||||||||||||||||||||||    
T  48326585 ttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 50831794 - 50831828
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  50831794 ttgtcaaaaagtggttgtacaaatatcatttctct 50831828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 51717320 - 51717354
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  51717320 ttgtcacaaattggttgtacaaatatcatttctct 51717354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 54036556 - 54036590
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  54036556 ttgtcacaaaatggttgtacaaatatcatttctct 54036590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 169540 - 169573
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  169540 ttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 916 - 945
Target Start/End: Complemental strand, 2109465 - 2109436
Alignment:
Q  916 tggttgtacaaatatcatttctctatgaca 945  Q
    ||||||||||||||||||||||||||||||    
T  2109465 tggttgtacaaatatcatttctctatgaca 2109436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 7037522 - 7037555
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  7037522 ttgtcacaaattggttgtacaaatatcatttctc 7037555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 23347808 - 23347775
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||| |||||||||||||||||||    
T  23347808 ttgtcacaaagtggatgtacaaatatcatttctc 23347775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 30042167 - 30042134
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  30042167 ttgtcacaaaatggttgtacaaatatcatttctc 30042134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 908 - 941
Target Start/End: Original strand, 31804370 - 31804403
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||| |||||||||||||||||||||||    
T  31804370 tcacaaagtgattgtacaaatatcatttctctat 31804403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 32365694 - 32365727
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  32365694 ttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 39010175 - 39010208
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  39010175 ttgtcacaaaatggttgtacaaatatcatttctc 39010208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 39241328 - 39241361
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  39241328 ttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 39684669 - 39684636
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  39684669 ttgtcagaaagtggttgtacaaatatcatttctc 39684636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 44165942 - 44165909
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||| ||||||||||||||||||||||||||||    
T  44165942 ttgtcgcaaagtggttgtacaaatatcatttctc 44165909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 912 - 941
Target Start/End: Original strand, 45277126 - 45277155
Alignment:
Q  912 aaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||    
T  45277126 aaagtggttgtacaaatatcatttctctat 45277155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 46794539 - 46794572
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  46794539 ttgtcagaaagtggttgtacaaatatcatttctc 46794572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 48099844 - 48099811
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||| ||||||||||||||    
T  48099844 ttgtcacaaagtggttgtataaatatcatttctc 48099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 51039154 - 51039187
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||| |||||||||||||||||||||    
T  51039154 ttgtcacaaagtagttgtacaaatatcatttctc 51039187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 51389112 - 51389145
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||| |||||||||||||||||||||||||||||    
T  51389112 ttgttacaaagtggttgtacaaatatcatttctc 51389145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 52392263 - 52392296
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||| |||||||||||||||||||    
T  52392263 ttgtcacaaagtggatgtacaaatatcatttctc 52392296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 56215638 - 56215605
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  56215638 ttgtcaaaaagtggttgtacaaatatcatttctc 56215605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 31427995 - 31428031
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||||||||||||||||||||||||||||||    
T  31427995 ttgtcacaaagtggttgtacaaatatcatttctctat 31428031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 49425771 - 49425736
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  49425771 ttgtcacaaagtggttgtacaaatatcatttctcta 49425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 25302681 - 25302715
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  25302681 ttgtcacaaagtggttgtacaaatatcatttctct 25302715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 49453524 - 49453490
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  49453524 ttgtcacaaagtggttgtacaaatatcatttctct 49453490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 50226917 - 50226951
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  50226917 ttgtcacaaagtggttgtacaaatatcatttctct 50226951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 5309078 - 5309111
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  5309078 ttgtcacaaagtggttgtacaaatatcatttctc 5309111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 32821668 - 32821635
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  32821668 ttgtcacaaagtggttgtacaaatatcatttctc 32821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 45740582 - 45740615
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  45740582 ttgtcacaaagtggttgtacaaatatcatttctc 45740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 937
Target Start/End: Complemental strand, 32966300 - 32966268
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttct 937  Q
    |||||||||||||||||||||||||||||||||    
T  32966300 ttgtcacaaagtggttgtacaaatatcatttct 32966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 39669839 - 39669804
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  39669839 ttgtcacaaaatggttgtacaaatatcatttctcta 39669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 935
Target Start/End: Original strand, 5477190 - 5477220
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcattt 935  Q
    |||||||||||||||||||||||||||||||    
T  5477190 ttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 7503637 - 7503603
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  7503637 tttgaacaaccatttcatacaacttttggtgacaa 7503603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 9011678 - 9011644
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  9011678 ttgtcacaaaatggttgtacaaatatcatttctct 9011644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 10384244 - 10384210
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||| ||||||||||||||||||||||    
T  10384244 ttgtcacaaagtagttgtacaaatatcatttctct 10384210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 27687546 - 27687580
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  27687546 ttgtcacaaaatggttgtacaaatatcatttctct 27687580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 40596081 - 40596115
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  40596081 ttgtcacaaaatggttgtacaaatatcatttctct 40596115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 40612147 - 40612113
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  40612147 ttgtcacaaaatggttgtacaaatatcatttctct 40612113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 42256493 - 42256459
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  42256493 ttgtcacaaaatggttgtacaaatatcatttctct 42256459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 45272187 - 45272221
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  45272187 ttgtcaaaaagtggttgtacaaatatcatttctct 45272221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 48325805 - 48325839
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  48325805 ttgtcacaaaatggttgtacaaatatcatttctct 48325839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 48872412 - 48872378
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  48872412 ttgtcataaagtggttgtacaaatatcatttctct 48872378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 48872851 - 48872885
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  48872851 tttgaacaaccatttcatacaacttttggtgacaa 48872885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 48872988 - 48873022
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||| |||||||||||||||    
T  48872988 ttgtcacaaagtggttgtataaatatcatttctct 48873022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 810
Target Start/End: Complemental strand, 4638096 - 4638063
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgaca 810  Q
    |||||||||||||||||||||||||||| |||||    
T  4638096 tttgaacaaccatttcatacaacttttggtgaca 4638063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 13813591 - 13813558
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  13813591 ttgtcacaaattggttgtacaaatatcatttctc 13813558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 15061878 - 15061845
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||| |||||||||||||||||    
T  15061878 ttgtcacaaagtggttatacaaatatcatttctc 15061845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 16658471 - 16658438
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||| ||||||||||||||||||||||||    
T  16658471 ttgtcacaatgtggttgtacaaatatcatttctc 16658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 25098826 - 25098859
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||| |||||||||||||||||||||||||||||    
T  25098826 ttgttacaaagtggttgtacaaatatcatttctc 25098859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 29264048 - 29264015
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  29264048 ttgtcataaagtggttgtacaaatatcatttctc 29264015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 912 - 941
Target Start/End: Complemental strand, 31436846 - 31436817
Alignment:
Q  912 aaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||    
T  31436846 aaagtggttgtacaaatatcatttctctat 31436817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 41507221 - 41507254
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  41507221 ttgtcacaaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.0000000001; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 5502404 - 5502369
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  5502404 ttgtcacaaagtggttgtacaaatatcatttctcta 5502369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 22852877 - 22852911
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  22852877 ttgtcacaaagtggttgtacaaatatcatttctct 22852911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 28927714 - 28927680
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  28927714 ttgtcacaaagtggttgtacaaatatcatttctct 28927680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 45101429 - 45101395
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  45101429 ttgtcacaaagtggttgtacaaatatcatttctct 45101395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 1796529 - 1796496
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  1796529 ttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 12732875 - 12732842
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  12732875 ttgtcacaaagtggttgtacaaatatcatttctc 12732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 777 - 847
Target Start/End: Complemental strand, 45101567 - 45101497
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaannnnnnnnnnnctcttttcattggataaaaacaatg 847  Q
    |||||||||||||||||||||||||||| ||||||           |||||||||||||||||||||||||    
T  45101567 tttgaacaaccatttcatacaacttttggtgacaacttttttttctctcttttcattggataaaaacaatg 45101497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 7279993 - 7280029
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||||||| ||||||||||||||||||||||    
T  7279993 ttgtcacaaagtggatgtacaaatatcatttctctat 7280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 8074762 - 8074797
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  8074762 ttgtcataaagtggttgtacaaatatcatttctcta 8074797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 908 - 939
Target Start/End: Complemental strand, 8841060 - 8841029
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||||||||||||||||    
T  8841060 tcacaaagtggttgtacaaatatcatttctct 8841029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 27836213 - 27836178
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27836213 ttgtcacaaagtggttgtacaaatatcatttatcta 27836178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 30927969 - 30928004
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  30927969 ttgtcacaaattggttgtacaaatatcatttctcta 30928004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 908 - 939
Target Start/End: Original strand, 32725821 - 32725852
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||||||||||||||||    
T  32725821 tcacaaagtggttgtacaaatatcatttctct 32725852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 908 - 939
Target Start/End: Complemental strand, 40842044 - 40842013
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||||||||||||||||    
T  40842044 tcacaaagtggttgtacaaatatcatttctct 40842013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 5740812 - 5740846
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  5740812 ttgtcaaaaagtggttgtacaaatatcatttctct 5740846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 6004977 - 6004943
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||| ||||||||||||||||||||||    
T  6004977 ttgtcacaaagtagttgtacaaatatcatttctct 6004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 7678765 - 7678731
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  7678765 ttgtcaaaaagtggttgtacaaatatcatttctct 7678731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 13267124 - 13267158
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||| |||||||||||||||||    
T  13267124 ttgtcacaaagtggttgaacaaatatcatttctct 13267158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 20288566 - 20288532
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  20288566 ttgtcacaaattggttgtacaaatatcatttctct 20288532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 21075195 - 21075161
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  21075195 ttgtcacaaattggttgtacaaatatcatttctct 21075161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 21418630 - 21418664
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  21418630 ttgtcagaaagtggttgtacaaatatcatttctct 21418664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 26629148 - 26629182
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  26629148 ttgtcaaaaagtggttgtacaaatatcatttctct 26629182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 28570308 - 28570342
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  28570308 tttgaacaaccatttcatacaacttttggtgacaa 28570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 28577901 - 28577935
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  28577901 tttgaacaaccatttcatacaacttttggtgacaa 28577935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 30170767 - 30170801
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  30170767 ttgtcaaaaagtggttgtacaaatatcatttctct 30170801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 32175127 - 32175093
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  32175127 tttgaacaaccatttcatacaacttttggtgacaa 32175093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 34474122 - 34474088
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  34474122 tttgaacaaccatttcatacaacttttggtgacaa 34474088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 44380652 - 44380686
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  44380652 ttgtcacaaaatggttgtacaaatatcatttctct 44380686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 1065450 - 1065417
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  1065450 ttgtcacaaattggttgtacaaatatcatttctc 1065417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 1370312 - 1370345
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||| |||||||||||||||||||||||||||||    
T  1370312 ttgttacaaagtggttgtacaaatatcatttctc 1370345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 7596929 - 7596962
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||| ||||||||||||||||||||    
T  7596929 ttgtcacaaagtgattgtacaaatatcatttctc 7596962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 9047097 - 9047130
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  9047097 ttgtcaaaaagtggttgtacaaatatcatttctc 9047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 10553121 - 10553154
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  10553121 ttgtcagaaagtggttgtacaaatatcatttctc 10553154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 16011944 - 16011977
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||| |||||||    
T  16011944 ttgtcacaaagtggttgtacaaatattatttctc 16011977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 21273748 - 21273781
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  21273748 ttgtcacaaaatggttgtacaaatatcatttctc 21273781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 37524455 - 37524488
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||| ||||||||||||||||||||    
T  37524455 ttgtcacaaagtgcttgtacaaatatcatttctc 37524488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 38844828 - 38844861
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  38844828 ttgtcacaaaatggttgtacaaatatcatttctc 38844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 42543381 - 42543414
Alignment:
Q  778 ttgaacaaccatttcatacaacttttgatgacaa 811  Q
    ||||||||||||||||||||||||||| ||||||    
T  42543381 ttgaacaaccatttcatacaacttttggtgacaa 42543414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 43873729 - 43873762
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  43873729 ttgtcacaaaatggttgtacaaatatcatttctc 43873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.0000000001; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 3188921 - 3188976
Alignment:
Q  8 tatacttggagtgcttgaagaaattcttgctcgagttcaccaacggatttcttctc 63  Q
    |||||||| |||||||||||||| |||||||| ||||||||||  |||||||||||    
T  3188921 tatacttgaagtgcttgaagaaaatcttgctcaagttcaccaagtgatttcttctc 3188976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 6865814 - 6865849
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  6865814 ttgtcacaaagtggttgtacaaatatcatttctcta 6865849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 36713216 - 36713251
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  36713216 ttgtcacaaagtggttgtacaaatatcatttctcta 36713251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 3141667 - 3141633
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||||||||||    
T  3141667 tttgaacaaccatttcatacaacttttgatgacaa 3141633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 23991172 - 23991206
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  23991172 ttgtcacaaagtggttgtacaaatatcatttctct 23991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 28811462 - 28811428
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  28811462 ttgtcacaaagtggttgtacaaatatcatttctct 28811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 19127157 - 19127124
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  19127157 ttgtcacaaagtggttgtacaaatatcatttctc 19127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 34381045 - 34381012
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  34381045 ttgtcacaaagtggttgtacaaatatcatttctc 34381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 39595305 - 39595272
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  39595305 ttgtcacaaagtggttgtacaaatatcatttctc 39595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 9594511 - 9594476
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  9594511 ttgtcacaaattggttgtacaaatatcatttctcta 9594476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 936
Target Start/End: Complemental strand, 12910817 - 12910786
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttc 936  Q
    ||||||||||||||||||||||||||||||||    
T  12910817 ttgtcacaaagtggttgtacaaatatcatttc 12910786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 43057468 - 43057433
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  43057468 ttgtcaaaaagtggttgtacaaatatcatttctcta 43057433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 125125 - 125091
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||| ||||||||||||||||||||||    
T  125125 ttgtcacaaagtagttgtacaaatatcatttctct 125091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 943
Target Start/End: Complemental strand, 3634527 - 3634489
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctatga 943  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  3634527 ttgtcacaaagtggttgtgcaaatataatttctctatga 3634489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 3634665 - 3634631
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||| ||||||||||||||||||||    
T  3634665 tttgaacaaccattacatacaacttttgatgacaa 3634631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 11768028 - 11768062
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||| ||||||||||||||||||||    
T  11768028 ttgtcacaaagtggatgtacaaatatcatttctct 11768062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 13734387 - 13734421
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  13734387 ttgtcataaagtggttgtacaaatatcatttctct 13734421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 14914405 - 14914371
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  14914405 ttgtcacaaaatggttgtacaaatatcatttctct 14914371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 19376170 - 19376204
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  19376170 ttgtcagaaagtggttgtacaaatatcatttctct 19376204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 935
Target Start/End: Original strand, 33567250 - 33567280
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcattt 935  Q
    |||||||||||||||||||||||||||||||    
T  33567250 ttgtcacaaagtggttgtacaaatatcattt 33567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 908 - 938
Target Start/End: Original strand, 36581506 - 36581536
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||||||||    
T  36581506 tcacaaagtggttgtacaaatatcatttctc 36581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 38500976 - 38500942
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  38500976 ttgtcacaaaatggttgtacaaatatcatttctct 38500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 3263546 - 3263579
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  3263546 ttgtcacaaattggttgtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 8728619 - 8728652
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  8728619 ttgtcaaaaagtggttgtacaaatatcatttctc 8728652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 9599766 - 9599799
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  9599766 ttgtcacaaattggttgtacaaatatcatttctc 9599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 12661985 - 12662018
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||| |||||||||||||||||||    
T  12661985 ttgtcacaaagtggatgtacaaatatcatttctc 12662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 12718418 - 12718451
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  12718418 ttgtcacaaattggttgtacaaatatcatttctc 12718451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 12779644 - 12779677
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  12779644 ttgtcacaaattggttgtacaaatatcatttctc 12779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 16143423 - 16143390
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  16143423 ttgtcacaaaatggttgtacaaatatcatttctc 16143390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 28501625 - 28501592
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  28501625 ttgtcacaaaatggttgtacaaatatcatttctc 28501592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 28904024 - 28903991
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||| ||||||||||||||||||||||||    
T  28904024 ttgtcacaatgtggttgtacaaatatcatttctc 28903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 28940419 - 28940386
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||| ||||||||||||||||||||||||    
T  28940419 ttgtcacaatgtggttgtacaaatatcatttctc 28940386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 30334793 - 30334826
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  30334793 ttgtcataaagtggttgtacaaatatcatttctc 30334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 30574415 - 30574448
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  30574415 ttgtcacaaattggttgtacaaatatcatttctc 30574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 40223823 - 40223856
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||| |||||||    
T  40223823 ttgtcacaaagtggttgtacaaatataatttctc 40223856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 41621966 - 41621999
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  41621966 ttgtcaaaaagtggttgtacaaatatcatttctc 41621999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 42699090 - 42699057
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  42699090 ttgtcacaaaatggttgtacaaatatcatttctc 42699057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.0000000001; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 34607958 - 34607993
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  34607958 ttgtcacaaagtggttgtacaaatatcatttctcta 34607993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 108464 - 108430
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  108464 ttgtcacaaagtggttgtacaaatatcatttctct 108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 1901964 - 1901998
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  1901964 ttgtcacaaagtggttgtacaaatatcatttctct 1901998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 1911410 - 1911444
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  1911410 ttgtcacaaagtggttgtacaaatatcatttctct 1911444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 5398951 - 5398917
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  5398951 ttgtcacaaagtggttgtacaaatatcatttctct 5398917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 12792671 - 12792637
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  12792671 ttgtcacaaagtggttgtacaaatatcatttctct 12792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 18169190 - 18169156
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  18169190 ttgtcacaaagtggttgtacaaatatcatttctct 18169156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 20215981 - 20215947
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  20215981 ttgtcacaaagtggttgtacaaatatcatttctct 20215947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 35272060 - 35272026
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  35272060 ttgtcacaaagtggttgtacaaatatcatttctct 35272026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 906 - 940
Target Start/End: Original strand, 41877650 - 41877684
Alignment:
Q  906 tgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||||||||||||||||||||||||||||    
T  41877650 tgtcacaaagtggttgtacaaatatcatttctcta 41877684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 48945880 - 48945846
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  48945880 ttgtcacaaagtggttgtacaaatatcatttctct 48945846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 14957869 - 14957836
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  14957869 ttgtcacaaagtggttgtacaaatatcatttctc 14957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 20380927 - 20380960
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  20380927 ttgtcacaaagtggttgtacaaatatcatttctc 20380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 942
Target Start/End: Original strand, 30796652 - 30796689
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctatg 942  Q
    |||||||||||||||||| |||||||||||||||||||    
T  30796652 ttgtcacaaagtggttgtgcaaatatcatttctctatg 30796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 908 - 941
Target Start/End: Original strand, 43409403 - 43409436
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||||||    
T  43409403 tcacaaagtggttgtacaaatatcatttctctat 43409436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 51464310 - 51464343
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  51464310 ttgtcacaaagtggttgtacaaatatcatttctc 51464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 907 - 939
Target Start/End: Complemental strand, 3483163 - 3483131
Alignment:
Q  907 gtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||    
T  3483163 gtcacaaagtggttgtacaaatatcatttctct 3483131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 34271528 - 34271564
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||| ||||||||||||||||||||||||||||||||    
T  34271528 ttgttacaaagtggttgtacaaatatcatttctctat 34271564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 34733329 - 34733365
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||| |||||    
T  34733329 ttgtcacaaagtggttgtacaaatatcatttatctat 34733365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 7294138 - 7294173
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||||||| |||||||||||||||||||||    
T  7294138 ttgtcacaaagtggatgtacaaatatcatttctcta 7294173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 11173491 - 11173456
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||||||||||||||||||||| |||||||    
T  11173491 ttgtcacaaagtggttgtacaaatatcaattctcta 11173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 24537252 - 24537217
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||||||| |||||||||||||||||||||    
T  24537252 ttgtcacaaagtggatgtacaaatatcatttctcta 24537217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 28300686 - 28300721
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  28300686 ttgtcataaagtggttgtacaaatatcatttctcta 28300721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 46315993 - 46316028
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  46315993 ttgtcataaagtggttgtacaaatatcatttctcta 46316028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 47683834 - 47683799
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  47683834 ttgtcacaaaatggttgtacaaatatcatttctcta 47683799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 3069612 - 3069646
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  3069612 ttgtcacaaattggttgtacaaatatcatttctct 3069646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 8254060 - 8254026
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  8254060 ttgtcacaaaatggttgtacaaatatcatttctct 8254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 908 - 938
Target Start/End: Complemental strand, 9027903 - 9027873
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||||||||    
T  9027903 tcacaaagtggttgtacaaatatcatttctc 9027873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 20714276 - 20714242
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  20714276 ttgtcacaaattggttgtacaaatatcatttctct 20714242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 22813105 - 22813071
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  22813105 ttgtcagaaagtggttgtacaaatatcatttctct 22813071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 26279917 - 26279883
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  26279917 ttgtcagaaagtggttgtacaaatatcatttctct 26279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 27528443 - 27528409
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||| ||||||||||||||||    
T  27528443 ttgtcacaaagtggttgttcaaatatcatttctct 27528409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 908 - 938
Target Start/End: Original strand, 31176481 - 31176511
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||||||||    
T  31176481 tcacaaagtggttgtacaaatatcatttctc 31176511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 31249221 - 31249255
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  31249221 tttgaacaaccatttcatacaacttttggtgacaa 31249255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 935
Target Start/End: Complemental strand, 31997846 - 31997816
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcattt 935  Q
    |||||||||||||||||||||||||||||||    
T  31997846 ttgtcacaaagtggttgtacaaatatcattt 31997816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 32931956 - 32931990
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  32931956 ttgtcacaaattggttgtacaaatatcatttctct 32931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 35376589 - 35376623
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  35376589 ttgtcacaaaatggttgtacaaatatcatttctct 35376623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 36818989 - 36818955
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  36818989 ttgtcacaaattggttgtacaaatatcatttctct 36818955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 43169654 - 43169688
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  43169654 tttgaacaaccatttcatacaacttttggtgacaa 43169688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 43169780 - 43169814
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  43169780 ttgtcacaaaatggttgtacaaatatcatttctct 43169814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 43176235 - 43176201
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||| ||||||||||||||||||||||||||||||    
T  43176235 ttgtaacaaagtggttgtacaaatatcatttctct 43176201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 46003878 - 46003844
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  46003878 tttgaacaaccatttcatacaacttttggtgacaa 46003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 46473161 - 46473127
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||| |||||||||||||||||||||||||||||    
T  46473161 ttgtcgcaaagtggttgtacaaatatcatttctct 46473127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 48405443 - 48405409
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  48405443 ttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 49196729 - 49196695
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  49196729 ttgtcacaaaatggttgtacaaatatcatttctct 49196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 49457598 - 49457564
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  49457598 ttgtcaaaaagtggttgtacaaatatcatttctct 49457564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 51650528 - 51650494
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  51650528 tttgaacaaccatttcatacaacttttggtgacaa 51650494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 52564672 - 52564706
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  52564672 ttgtcacaaaatggttgtacaaatatcatttctct 52564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 53932429 - 53932463
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  53932429 ttgtcacaaaatggttgtacaaatatcatttctct 53932463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 462439 - 462472
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  462439 ttgtcacaaaatggttgtacaaatatcatttctc 462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 9719479 - 9719512
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  9719479 ttgtcaaaaagtggttgtacaaatatcatttctc 9719512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 11327141 - 11327108
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  11327141 ttgtcacaaaatggttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 32457793 - 32457826
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  32457793 ttgtcaaaaagtggttgtacaaatatcatttctc 32457826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 41309033 - 41309000
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||| ||||    
T  41309033 ttgtcacaaagtggttgtacaaatatcatatctc 41309000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 912 - 941
Target Start/End: Original strand, 44334846 - 44334875
Alignment:
Q  912 aaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||    
T  44334846 aaagtggttgtacaaatatcatttctctat 44334875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 50294150 - 50294183
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||| ||||||||||||||||||||||||||||    
T  50294150 ttgtcgcaaagtggttgtacaaatatcatttctc 50294183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.0000000001; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 6365219 - 6365184
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    ||||||||||||||||||||||||||||||||||||    
T  6365219 ttgtcacaaagtggttgtacaaatatcatttctcta 6365184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 4738610 - 4738644
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  4738610 ttgtcacaaagtggttgtacaaatatcatttctct 4738644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 5167780 - 5167814
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  5167780 ttgtcacaaagtggttgtacaaatatcatttctct 5167814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 15283288 - 15283322
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  15283288 ttgtcacaaagtggttgtacaaatatcatttctct 15283322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 33296109 - 33296143
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  33296109 ttgtcacaaagtggttgtacaaatatcatttctct 33296143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 36133007 - 36132973
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  36133007 ttgtcacaaagtggttgtacaaatatcatttctct 36132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 42283277 - 42283311
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  42283277 ttgtcacaaagtggttgtacaaatatcatttctct 42283311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 908 - 941
Target Start/End: Complemental strand, 13553177 - 13553144
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||||||    
T  13553177 tcacaaagtggttgtacaaatatcatttctctat 13553144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 30856840 - 30856807
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  30856840 ttgtcacaaagtggttgtacaaatatcatttctc 30856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 36435714 - 36435681
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  36435714 ttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 41040299 - 41040266
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  41040299 ttgtcacaaagtggttgtacaaatatcatttctc 41040266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Original strand, 36909881 - 36909917
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36909881 ttgtcacaaaatggttgtacaaatatcatttctctat 36909917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 37966400 - 37966365
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  37966400 ttgtcacaaattggttgtacaaatatcatttctcta 37966365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 1889180 - 1889146
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  1889180 ttgtcagaaagtggttgtacaaatatcatttctct 1889146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 7485492 - 7485458
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||| ||||||||||||||||    
T  7485492 ttgtcacaaagtggttgttcaaatatcatttctct 7485458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 8482259 - 8482293
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  8482259 ttgtcataaagtggttgtacaaatatcatttctct 8482293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 11229359 - 11229393
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||| ||||||||||||||||||||    
T  11229359 ttgtcacaaagtggatgtacaaatatcatttctct 11229393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 908 - 938
Target Start/End: Complemental strand, 12600078 - 12600048
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||||||||||||||||||||    
T  12600078 tcacaaagtggttgtacaaatatcatttctc 12600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 29795480 - 29795446
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  29795480 ttgtcacaaaatggttgtacaaatatcatttctct 29795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 31296883 - 31296917
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  31296883 ttgtcacaaaatggttgtacaaatatcatttctct 31296917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 34144589 - 34144623
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  34144589 ttgtcacaaattggttgtacaaatatcatttctct 34144623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 35171264 - 35171298
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  35171264 ttgtcacaaaatggttgtacaaatatcatttctct 35171298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 44189860 - 44189826
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  44189860 ttgtcataaagtggttgtacaaatatcatttctct 44189826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 45515499 - 45515533
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  45515499 tttgaacaaccatttcatacaacttttggtgacaa 45515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 912 - 941
Target Start/End: Original strand, 546430 - 546459
Alignment:
Q  912 aaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||    
T  546430 aaagtggttgtacaaatatcatttctctat 546459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 4344482 - 4344449
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  4344482 ttgtcacaaaatggttgtacaaatatcatttctc 4344449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 5455491 - 5455524
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||| |||||||||||||||||||    
T  5455491 ttgtcacaaagtggatgtacaaatatcatttctc 5455524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 21490736 - 21490703
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||| |||||||||||||||||||||    
T  21490736 ttgtcacaaagtagttgtacaaatatcatttctc 21490703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 912 - 941
Target Start/End: Complemental strand, 23880121 - 23880092
Alignment:
Q  912 aaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||    
T  23880121 aaagtggttgtacaaatatcatttctctat 23880092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 24727628 - 24727661
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  24727628 ttgtcaaaaagtggttgtacaaatatcatttctc 24727661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 25507288 - 25507255
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  25507288 ttgtcaaaaagtggttgtacaaatatcatttctc 25507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 25801840 - 25801873
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  25801840 ttgtcacaaattggttgtacaaatatcatttctc 25801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 30487507 - 30487540
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  30487507 ttgtcacaaattggttgtacaaatatcatttctc 30487540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 32688582 - 32688615
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  32688582 ttgtcagaaagtggttgtacaaatatcatttctc 32688615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 45376259 - 45376292
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  45376259 ttgtcaaaaagtggttgtacaaatatcatttctc 45376292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 219702 - 219736
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  219702 ttgtcacaaagtggttgtacaaatatcatttctct 219736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000004; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 2469736 - 2469702
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  2469736 ttgtcacaaagtggttgtacaaatatcatttctct 2469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 7807226 - 7807192
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||||||||||    
T  7807226 tttgaacaaccatttcatacaacttttgatgacaa 7807192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 22330658 - 22330692
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  22330658 ttgtcacaaagtggttgtacaaatatcatttctct 22330692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 37352017 - 37352051
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  37352017 ttgtcacaaagtggttgtacaaatatcatttctct 37352051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 41966365 - 41966331
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  41966365 ttgtcacaaagtggttgtacaaatatcatttctct 41966331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 43260162 - 43260128
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||||||||||    
T  43260162 tttgaacaaccatttcatacaacttttgatgacaa 43260128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 942
Target Start/End: Complemental strand, 30941211 - 30941174
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctatg 942  Q
    |||| |||||||||||||||||||||||||||||||||    
T  30941211 ttgttacaaagtggttgtacaaatatcatttctctatg 30941174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 31982090 - 31982057
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  31982090 ttgtcacaaagtggttgtacaaatatcatttctc 31982057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 908 - 941
Target Start/End: Original strand, 43079673 - 43079706
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctctat 941  Q
    ||||||||||||||||||||||||||||||||||    
T  43079673 tcacaaagtggttgtacaaatatcatttctctat 43079706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Complemental strand, 19426613 - 19426577
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||| ||||||||||||||||||||||||||    
T  19426613 ttgtcacaaaatggttgtacaaatatcatttctctat 19426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 941
Target Start/End: Complemental strand, 25887627 - 25887591
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctctat 941  Q
    |||||||||||||| ||||||||||||||||||||||    
T  25887627 ttgtcacaaagtggatgtacaaatatcatttctctat 25887591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 936
Target Start/End: Complemental strand, 28596939 - 28596908
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttc 936  Q
    ||||||||||||||||||||||||||||||||    
T  28596939 ttgtcacaaagtggttgtacaaatatcatttc 28596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 908 - 939
Target Start/End: Original strand, 38023465 - 38023496
Alignment:
Q  908 tcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||||||||||||||||    
T  38023465 tcacaaagtggttgtacaaatatcatttctct 38023496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 156020 - 156054
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||| ||||||||||||||||||||    
T  156020 ttgtcacaaagtggatgtacaaatatcatttctct 156054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 4971323 - 4971289
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  4971323 ttgtcacaaaatggttgtacaaatatcatttctct 4971289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 10591188 - 10591154
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||| ||||||    
T  10591188 ttgtcacaaagtggttgtacaaatatcaattctct 10591154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 19426751 - 19426717
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  19426751 tttgaacaaccatttcatacaacttttggtgacaa 19426717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 28597051 - 28597017
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  28597051 tttgaacaaccatttcatacaacttttggtgacaa 28597017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 28824536 - 28824502
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  28824536 ttgtcagaaagtggttgtacaaatatcatttctct 28824502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 30864455 - 30864489
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  30864455 ttgtcacaaattggttgtacaaatatcatttctct 30864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 31274567 - 31274601
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  31274567 ttgtcacaaattggttgtacaaatatcatttctct 31274601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 32154450 - 32154484
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  32154450 tttgaacaaccatttcatacaacttttggtgacaa 32154484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 37856192 - 37856226
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  37856192 ttgtcacaaaatggttgtacaaatatcatttctct 37856226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Complemental strand, 40842578 - 40842544
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  40842578 tttgaacaaccatttcatacaacttttggtgacaa 40842544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 777 - 811
Target Start/End: Original strand, 47424885 - 47424919
Alignment:
Q  777 tttgaacaaccatttcatacaacttttgatgacaa 811  Q
    |||||||||||||||||||||||||||| ||||||    
T  47424885 tttgaacaaccatttcatacaacttttggtgacaa 47424919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 48395281 - 48395247
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  48395281 ttgtcaaaaagtggttgtacaaatatcatttctct 48395247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 2347097 - 2347130
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  2347097 ttgtcacaaaatggttgtacaaatatcatttctc 2347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 25200397 - 25200430
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  25200397 ttgtcacaaattggttgtacaaatatcatttctc 25200430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 906 - 939
Target Start/End: Complemental strand, 27778111 - 27778078
Alignment:
Q  906 tgtcacaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||| ||||||||||||||||||||||    
T  27778111 tgtcacaaagtagttgtacaaatatcatttctct 27778078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 28109990 - 28109957
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  28109990 ttgtcaaaaagtggttgtacaaatatcatttctc 28109957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 33050216 - 33050183
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  33050216 ttgtcacaaaatggttgtacaaatatcatttctc 33050183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 40842438 - 40842405
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||| |||||||||||||||||||    
T  40842438 ttgtcacaaagtggatgtacaaatatcatttctc 40842405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 910 - 939
Target Start/End: Original strand, 42942422 - 42942451
Alignment:
Q  910 acaaagtggttgtacaaatatcatttctct 939  Q
    ||||||||||||||||||||||||||||||    
T  42942422 acaaagtggttgtacaaatatcatttctct 42942451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 43444668 - 43444635
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  43444668 ttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 48866968 - 48867001
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||||||| |||||||||||||||||||    
T  48866968 ttgtcacaaagtggctgtacaaatatcatttctc 48867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 49069282 - 49069249
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||| |||||||||||||||||||||||||||    
T  49069282 ttgtcaaaaagtggttgtacaaatatcatttctc 49069249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000004; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 30796113 - 30796147
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||||||||||||    
T  30796113 ttgtcacaaagtggttgtacaaatatcatttctct 30796147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Original strand, 32457290 - 32457323
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  32457290 ttgtcacaaagtggttgtacaaatatcatttctc 32457323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 937
Target Start/End: Complemental strand, 6435069 - 6435037
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttct 937  Q
    |||||||||||||||||||||||||||||||||    
T  6435069 ttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 9954581 - 9954546
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctcta 940  Q
    |||||||||| |||||||||||||||||||||||||    
T  9954581 ttgtcacaaattggttgtacaaatatcatttctcta 9954546  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 1897730 - 1897696
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  1897730 ttgtcataaagtggttgtacaaatatcatttctct 1897696  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 3339537 - 3339571
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  3339537 ttgtcacaaaatggttgtacaaatatcatttctct 3339571  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 11785388 - 11785354
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||| ||||||||||||||||||||||||    
T  11785388 ttgtcacaaaatggttgtacaaatatcatttctct 11785354  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 12441571 - 12441537
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||| ||||||||||||||||||||||    
T  12441571 ttgtcacaaagtagttgtacaaatatcatttctct 12441537  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 29383590 - 29383556
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  29383590 ttgtcagaaagtggttgtacaaatatcatttctct 29383556  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 31517207 - 31517241
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  31517207 ttgtcaaaaagtggttgtacaaatatcatttctct 31517241  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Original strand, 31883342 - 31883376
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  31883342 ttgtcaaaaagtggttgtacaaatatcatttctct 31883376  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 32149533 - 32149499
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||| ||||||||    
T  32149533 ttgtcacaaagtggttgtacaaatattatttctct 32149499  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 2056816 - 2056783
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    |||||||||| |||||||||||||||||||||||    
T  2056816 ttgtcacaaattggttgtacaaatatcatttctc 2056783  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 938
Target Start/End: Complemental strand, 113658 - 113625
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctc 938  Q
    ||||||||||||||||||||||||||||||||||    
T  113658 ttgtcacaaagtggttgtacaaatatcatttctc 113625  T

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Target: scaffold0131 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 905 - 937
Target Start/End: Original strand, 15572 - 15604
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttct 937  Q
    |||||||||||||||||||||||||||||||||    
T  15572 ttgtcacaaagtggttgtacaaatatcatttct 15604  T

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Target: scaffold0504 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 912 - 942
Target Start/End: Original strand, 10780 - 10810
Alignment:
Q  912 aaagtggttgtacaaatatcatttctctatg 942  Q
    |||||||||||||||||||||||||||||||    
T  10780 aaagtggttgtacaaatatcatttctctatg 10810  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 9486 - 9452
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  9486 ttgtcataaagtggttgtacaaatatcatttctct 9452  T

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Target: scaffold0130 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 25736 - 25702
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||| ||||||||||||||||||||||||||||    
T  25736 ttgtcataaagtggttgtacaaatatcatttctct 25702  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 939
Target Start/End: Complemental strand, 38912 - 38878
Alignment:
Q  905 ttgtcacaaagtggttgtacaaatatcatttctct 939  Q
    |||||||||||||||||||||||||| ||||||||    
T  38912 ttgtcacaaagtggttgtacaaatattatttctct 38878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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