View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5443-Insertion-2 (Length: 1137)

Name: NF5443-Insertion-2
Description: NF5443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5443-Insertion-2
NF5443-Insertion-2
[»] chr3 (19 HSPs)
chr3 (713-953)||(6942495-6942752)
chr3 (775-953)||(6787967-6788151)
chr3 (777-953)||(6939399-6939577)
chr3 (786-897)||(8467036-8467147)
chr3 (311-387)||(6527529-6527605)
chr3 (311-387)||(6550333-6550409)
chr3 (311-387)||(6558858-6558934)
chr3 (311-387)||(6849110-6849186)
chr3 (311-387)||(6797236-6797312)
chr3 (552-635)||(6483324-6483406)
chr3 (311-360)||(6789464-6789513)
chr3 (263-304)||(9719063-9719104)
chr3 (314-378)||(6785697-6785761)
chr3 (313-387)||(6938483-6938555)
chr3 (583-644)||(6800980-6801041)
chr3 (334-387)||(9720624-9720677)
chr3 (730-766)||(6788174-6788210)
chr3 (317-374)||(6466146-6466203)
chr3 (334-387)||(6802896-6802949)
[»] scaffold0425 (1 HSPs)
scaffold0425 (311-387)||(12215-12291)
[»] chr5 (4 HSPs)
chr5 (779-864)||(28362649-28362734)
chr5 (827-899)||(4314182-4314254)
chr5 (786-864)||(1569745-1569823)
chr5 (835-889)||(42172783-42172837)
[»] chr8 (1 HSPs)
chr8 (783-878)||(5354180-5354275)
[»] chr2 (2 HSPs)
chr2 (788-884)||(33720155-33720255)
chr2 (818-889)||(6683704-6683775)
[»] chr1 (1 HSPs)
chr1 (783-864)||(34564829-34564910)
[»] chr4 (1 HSPs)
chr4 (791-877)||(48681542-48681628)
[»] chr6 (2 HSPs)
chr6 (803-864)||(16519714-16519775)
chr6 (779-856)||(1782742-1782819)


Alignment Details
Target: chr3 (Bit Score: 126; Significance: 2e-64; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 713 - 953
Target Start/End: Original strand, 6942495 - 6942752
Alignment:
Q  713 acatggcaagtttccca-aagtatgttagaacagcaaacccgttcaaaaatcaaa--------gaaacagtaaa------taatgaacacacgatgtttg 797  Q
    |||||||| ||| |||| |||||||||||||||||||||  ||||||||||||||        |||||||||||      ||||||||||||||||||||    
T  6942495 acatggcatgttacccataagtatgttagaacagcaaactggttcaaaaatcaaaaaattaaagaaacagtaaacgcaaataatgaacacacgatgtttg 6942594  T
Q  798 gcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattatgagtgaaagattaaggtttacaatgcacaactt 897  Q
    | |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  6942595 gtaacgaagttcagccaatattgcctacgtctccgactgcagagcagctgcagttcctttttattatgagagaaagagtaatgtttacaatgcacaactt 6942694  T
Q  898 gtgtataaa-actattgttcagattac-acattacccctgaaccgtaccaccagtcgc 953  Q
    ||||||||| |||||||| |||||||| |||| | |||||||||||||| ||||||||    
T  6942695 gtgtataaacactattgtccagattacaacatcaaccctgaaccgtacccccagtcgc 6942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 775 - 953
Target Start/End: Complemental strand, 6788151 - 6787967
Alignment:
Q  775 aaataatgaacacacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattatgagtgaaaga 874  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6788151 aaataataaacacacgatgtttggtaacgaagttcggccaatattgcctacatctccgactgcagagaagctgcagttcctttttattatgagtgaaaga 6788052  T
Q  875 ttaaggtttacaatgcacaacttgtgtat-----aaaactattgttcagattac-acattacccctgaaccgtaccaccagtcgc 953  Q
    |||||||||||||||||||||||||||||     || |||||||| |||||||| |||| ||||||||||| |||| ||||||||    
T  6788051 ttaaggtttacaatgcacaacttgtgtataattaaacactattgtccagattacaacatcacccctgaaccatacccccagtcgc 6787967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 777 - 953
Target Start/End: Original strand, 6939399 - 6939577
Alignment:
Q  777 ataatgaacacacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattatgagtgaaagatt 876  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  6939399 ataatgaacacacgatgtttggtaacgaagttcagccaatattgcctacgtctccgactgcagagcagctgcagttcctttttattatgagagaaagagt 6939498  T
Q  877 aaggtttacaatgcacaacttgtgtat-aaaactattgttcagattac-acattacccctgaaccgtaccaccagtcgc 953  Q
    || |||||||||||||||| ||||||| ||||||||||| |||||||| |||| | || ||||||||||| ||||||||    
T  6939499 aatgtttacaatgcacaacgtgtgtataaaaactattgtccagattacaacatcaaccgtgaaccgtacccccagtcgc 6939577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 786 - 897
Target Start/End: Original strand, 8467036 - 8467147
Alignment:
Q  786 acacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattatgagtgaaagattaaggtttac 885  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||| | |||||||||| |||||||    
T  8467036 acacaatgtttggtaacgaagttcggccaatattgcctacgtctccgactgtagagaagctgcagttcctttgtattatcaatgaaagattagggtttac 8467135  T
Q  886 aatgcacaactt 897  Q
    | ||||||||||    
T  8467136 agtgcacaactt 8467147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 6527605 - 6527529
Alignment:
Q  311 taattatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  6527605 taattatatgtgatcttaactatgtttgaatgtaaaactagggaaaagatgacatgatgcaatttatattactaaaa 6527529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 6550409 - 6550333
Alignment:
Q  311 taattatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  || |||||||||||||| |||||||||||    
T  6550409 taattatatgttatcttaactatgtttgaatgtaaaactagggaaagaataatgtgatgcaatttgtattaccaaaa 6550333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 6558934 - 6558858
Alignment:
Q  311 taattatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  6558934 taattatatgttatcttaattatgtttgaatttaaaactagggaagagatgatgtgttgcaatttatattaccaaaa 6558858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 6849186 - 6849110
Alignment:
Q  311 taattatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  6849186 taattatatgtgatcttaactatgtttgaatgtaaaactacggaaaagatgacatgatgcaatttatattaccaaaa 6849110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 6797312 - 6797236
Alignment:
Q  311 taattatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    ||||||| ||||||||||  |||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||    
T  6797312 taattatgtgttatcttaattatgattgaatttaaaaatagggaaaagttgatgtgatgcaatttatattaccaaaa 6797236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 552 - 635
Target Start/End: Complemental strand, 6483406 - 6483324
Alignment:
Q  552 aatcatgaatcttcatatttcaactgtcaaaatgacatttaacgaaaaagtaattagaatctgtacgggaaaatgttctcaaat 635  Q
    ||||||||||||||| |||| |  |||||||| |||||||||| |||| |||||||||||||||| | ||||||||||||||||    
T  6483406 aatcatgaatcttcagattttag-tgtcaaaaggacatttaaccaaaaggtaattagaatctgtatgagaaaatgttctcaaat 6483324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 6789513 - 6789464
Alignment:
Q  311 taattatatgttatcttatctatgtttgaatgtaaaactagggaaaagat 360  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  6789513 taattatatgttatcttagctgtgtttgaatgtaaaactagggaaaagat 6789464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 9719104 - 9719063
Alignment:
Q  263 taaaagacagcaacacatgcaaaaagattgatatcaatcaca 304  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9719104 taaaagacagcaacacatgcaaaaagattgatatcaatcaca 9719063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 314 - 378
Target Start/End: Complemental strand, 6785761 - 6785697
Alignment:
Q  314 ttatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttata 378  Q
    |||||||||||||||  |||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  6785761 ttatatgttatcttaattatgtttgaacgtaaagctagggaaaggatgatgtgaagcaatttata 6785697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 6938483 - 6938555
Alignment:
Q  313 attatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    |||||||||||| |||   |||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||    
T  6938483 attatatgttattttaataatgtttgaatctaaaaatagggaa--gatgatgtgatgcaatttatattaccaaaa 6938555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 583 - 644
Target Start/End: Complemental strand, 6801041 - 6800980
Alignment:
Q  583 atgacatttaacgaaaaagtaattagaatctgtacgggaaaatgttctcaaatgccacatta 644  Q
    |||| ||||||| |||| |||||||||||||||  |||||||||||||||||||||| ||||    
T  6801041 atgatatttaaccaaaaggtaattagaatctgtttgggaaaatgttctcaaatgccatatta 6800980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 9720677 - 9720624
Alignment:
Q  334 gtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    ||||| |||||| ||||||||||| |||||| ||||| ||||||||||||||||    
T  9720677 gtttggatgtaacactagggaaaatatgatgcgatgctatttatattaccaaaa 9720624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 730 - 766
Target Start/End: Complemental strand, 6788210 - 6788174
Alignment:
Q  730 aagtatgttagaacagcaaacccgttcaaaaatcaaa 766  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6788210 aagtatgttagatcagcaaacccgttcaaaaatcaaa 6788174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 6466146 - 6466203
Alignment:
Q  317 tatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatt 374  Q
    |||||||| ||| ||||||||||||||||||||||| |||| || |||  ||||||||    
T  6466146 tatgttatattaactatgtttgaatgtaaaactaggcaaaatataatgcaatgcaatt 6466203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 6802949 - 6802896
Alignment:
Q  334 gtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    ||||| |||||||| ||||||||| |||||| ||| ||| ||||||||||||||    
T  6802949 gtttggatgtaaaattagggaaaatatgatgcgattcaaattatattaccaaaa 6802896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 12291 - 12215
Alignment:
Q  311 taattatatgttatcttatctatgtttgaatgtaaaactagggaaaagatgatgtgatgcaatttatattaccaaaa 387  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  12291 taattatatgtgatcttaactatgtttgaatgtaaaactacggaaaagatgacatgatgcaatttatattaccaaaa 12215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 5e-19; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 779 - 864
Target Start/End: Complemental strand, 28362734 - 28362649
Alignment:
Q  779 aatgaacacacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattat 864  Q
    |||||||||||||||||||| ||| |||||   ||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  28362734 aatgaacacacgatgtttggtaacaaagtttaaccaattttgcctatgtctcagactgcagagcagctgcagttcctttgtattat 28362649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 827 - 899
Target Start/End: Original strand, 4314182 - 4314254
Alignment:
Q  827 tctccgactgcagagcagctgcagttcctttttattatgagtgaaagattaaggtttacaatgcacaacttgt 899  Q
    |||| ||||||||||||||||||||||  || |||||| || ||||||||  ||||||||||| | |||||||    
T  4314182 tctctgactgcagagcagctgcagttctgttgtattatcagcgaaagatttgggtttacaatgtagaacttgt 4314254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 786 - 864
Target Start/End: Complemental strand, 1569823 - 1569745
Alignment:
Q  786 acacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattat 864  Q
    |||| |||| ||| |||||||||| | |||| ||||||| ||||||||||||| || | ||||||||| ||| ||||||    
T  1569823 acacaatgtctggaaacgaagttcagacaattttgcctacgtctccgactgcaaaggaactgcagttcatttgtattat 1569745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 889
Target Start/End: Original strand, 42172783 - 42172837
Alignment:
Q  835 tgcagagcagctgcagttcctttttattatgagtgaaagattaaggtttacaatg 889  Q
    ||||||||||||| |||||||||  ||||| |||||||||||| || ||||||||    
T  42172783 tgcagagcagctgtagttcctttgaattatcagtgaaagattagggcttacaatg 42172837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 783 - 878
Target Start/End: Original strand, 5354180 - 5354275
Alignment:
Q  783 aacacacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattatgagtgaaagattaa 878  Q
    ||||||| |||||||| ||||||||||||||||| |||||||  |||| |||| || |||||||| ||||||||| ||||||  |||||| |||||    
T  5354180 aacacacaatgtttggtaacgaagttcggccaattttgcctacttctctgactacaaagcagctgtagttcctttgtattatcggtgaaaaattaa 5354275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 788 - 884
Target Start/End: Complemental strand, 33720255 - 33720155
Alignment:
Q  788 acgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgca----gagcagctgcagttcctttttattatgagtgaaagattaaggttt 883  Q
    ||||||||||  ||||||||||||||||| |||||||  ||||||||||||    ||||||||||||||||||| ||||||  ||||||| ||| |||||    
T  33720255 acgatgtttgataacgaagttcggccaattttgcctacatctccgactgcagagcgagcagctgcagttcctttctattatctgtgaaagtttagggttt 33720156  T
Q  884 a 884  Q
    |    
T  33720155 a 33720155  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 6683704 - 6683775
Alignment:
Q  818 ttgcctaagtctccgactgcagagcagctgcagttcctttttattatgagtgaaagattaaggtttacaatg 889  Q
    |||||||  ||| ||||||||||||||||||||||||||| ||||||   | |||||||| |||||||||||    
T  6683704 ttgcctatatcttcgactgcagagcagctgcagttcctttgtattatcgattaaagattagggtttacaatg 6683775  T

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Target: chr1 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 783 - 864
Target Start/End: Complemental strand, 34564910 - 34564829
Alignment:
Q  783 aacacacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattat 864  Q
    |||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||| | || || |||||| ||||||    
T  34564910 aacacacgatgtttggtaacgaagttcggccaaatttgcctacgtctccgactgtagagctggtgtaggtcctttctattat 34564829  T

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Target: chr4 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 791 - 877
Target Start/End: Complemental strand, 48681628 - 48681542
Alignment:
Q  791 atgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattatgagtgaaagatta 877  Q
    |||||||| || |||||||||||||| ||| ||  |||||||| |||||||  |||||||||||||| |||||| |||| |||||||    
T  48681628 atgtttggtaatgaagttcggccaattttgtctgcgtctccgaatgcagagtggctgcagttcctttatattatcagtggaagatta 48681542  T

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Target: chr6 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 803 - 864
Target Start/End: Complemental strand, 16519775 - 16519714
Alignment:
Q  803 gaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctttttattat 864  Q
    |||||||||| |||  ||||||| ||||| || ||||||||| |||||||||||||||||||    
T  16519775 gaagttcggctaattgtgcctaattctccaacagcagagcagttgcagttcctttttattat 16519714  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 856
Target Start/End: Complemental strand, 1782819 - 1782742
Alignment:
Q  779 aatgaacacacgatgtttggcaacgaagttcggccaatattgcctaagtctccgactgcagagcagctgcagttcctt 856  Q
    |||||||| || |||||||| || |||||| ||||||| ||||| |  |||||||||||||||  | |||||||||||    
T  1782819 aatgaacatacaatgtttggtaatgaagtttggccaattttgccaacctctccgactgcagagtggttgcagttcctt 1782742  T

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