View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5444-Insertion-4 (Length: 560)

Name: NF5444-Insertion-4
Description: NF5444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5444-Insertion-4
NF5444-Insertion-4
[»] chr2 (36 HSPs)
chr2 (31-548)||(23664363-23664887)
chr2 (25-204)||(34082525-34082711)
chr2 (25-100)||(33739616-33739691)
chr2 (25-102)||(16075093-16075170)
chr2 (25-100)||(11675221-11675297)
chr2 (24-100)||(13002071-13002147)
chr2 (25-100)||(18370301-18370376)
chr2 (27-92)||(33173549-33173614)
chr2 (25-101)||(1750239-1750315)
chr2 (25-100)||(8386768-8386844)
chr2 (27-87)||(17265353-17265413)
chr2 (24-92)||(39906361-39906429)
chr2 (25-92)||(44542897-44542964)
chr2 (27-92)||(6332367-6332432)
chr2 (44-100)||(16513140-16513196)
chr2 (24-92)||(20939801-20939869)
chr2 (24-92)||(39904701-39904769)
chr2 (25-100)||(768594-768669)
chr2 (27-102)||(2586431-2586506)
chr2 (24-99)||(9689460-9689535)
chr2 (41-100)||(23387193-23387252)
chr2 (25-100)||(37169625-37169700)
chr2 (25-100)||(42850085-42850160)
chr2 (30-100)||(1576722-1576792)
chr2 (25-96)||(29512125-29512198)
chr2 (24-100)||(7682088-7682163)
chr2 (24-92)||(22302069-22302137)
chr2 (41-92)||(9690249-9690300)
chr2 (42-105)||(15554100-15554163)
chr2 (59-100)||(23387064-23387105)
chr2 (165-218)||(44257413-44257466)
chr2 (24-81)||(44257505-44257562)
chr2 (141-215)||(45629683-45629760)
chr2 (170-202)||(1297564-1297596)
chr2 (165-217)||(39906468-39906520)
chr2 (25-100)||(41527945-41528021)
[»] chr3 (45 HSPs)
chr3 (25-214)||(33837765-33837962)
chr3 (25-99)||(31039635-31039709)
chr3 (25-100)||(53581599-53581674)
chr3 (25-99)||(50801614-50801688)
chr3 (25-99)||(50874192-50874266)
chr3 (25-215)||(32203193-32203386)
chr3 (25-102)||(53467426-53467503)
chr3 (25-215)||(13349175-13349372)
chr3 (25-100)||(27317679-27317754)
chr3 (28-100)||(12127584-12127656)
chr3 (30-106)||(50913071-50913147)
chr3 (25-100)||(1376075-1376150)
chr3 (25-92)||(6114827-6114894)
chr3 (25-100)||(8814818-8814893)
chr3 (25-100)||(27360036-27360110)
chr3 (25-197)||(48765183-48765365)
chr3 (24-92)||(7848572-7848640)
chr3 (25-97)||(17605513-17605585)
chr3 (27-100)||(34277558-34277630)
chr3 (24-92)||(11460195-11460263)
chr3 (44-100)||(22894623-22894679)
chr3 (24-92)||(26158314-26158382)
chr3 (25-139)||(36823995-36824108)
chr3 (24-92)||(37504586-37504654)
chr3 (24-92)||(45059614-45059682)
chr3 (25-92)||(21727691-21727758)
chr3 (28-102)||(3269413-3269487)
chr3 (42-100)||(7521421-7521479)
chr3 (27-84)||(994811-994868)
chr3 (165-202)||(3544257-3544294)
chr3 (24-100)||(3544333-3544410)
chr3 (27-92)||(17065774-17065839)
chr3 (24-92)||(51952246-51952315)
chr3 (24-92)||(2868245-2868313)
chr3 (24-84)||(4043673-4043733)
chr3 (24-92)||(6109246-6109314)
chr3 (24-92)||(6748731-6748799)
chr3 (24-92)||(47461739-47461807)
chr3 (24-75)||(17226273-17226324)
chr3 (24-92)||(12896682-12896750)
chr3 (25-100)||(26103694-26103767)
chr3 (166-218)||(26152388-26152440)
chr3 (24-92)||(38798023-38798091)
chr3 (170-202)||(38798178-38798210)
chr3 (165-197)||(51952184-51952216)
[»] chr4 (62 HSPs)
chr4 (25-215)||(6946697-6946889)
chr4 (25-193)||(38425636-38425811)
chr4 (25-100)||(20458917-20458992)
chr4 (25-100)||(6137583-6137658)
chr4 (25-100)||(6193040-6193115)
chr4 (25-100)||(40496227-40496302)
chr4 (25-101)||(36955409-36955485)
chr4 (25-100)||(9744216-9744291)
chr4 (25-100)||(14863025-14863099)
chr4 (25-100)||(16553477-16553552)
chr4 (25-100)||(26335793-26335868)
chr4 (25-100)||(33105964-33106039)
chr4 (25-92)||(52437518-52437585)
chr4 (25-99)||(15725231-15725305)
chr4 (25-99)||(29102037-29102111)
chr4 (24-92)||(5046720-5046788)
chr4 (25-100)||(4490717-4490792)
chr4 (25-100)||(4712709-4712784)
chr4 (25-100)||(11777580-11777655)
chr4 (25-100)||(23384007-23384082)
chr4 (25-100)||(46106726-46106801)
chr4 (34-100)||(52306829-52306895)
chr4 (27-100)||(45875813-45875886)
chr4 (24-92)||(3818814-3818882)
chr4 (24-92)||(10216331-10216399)
chr4 (24-92)||(13211885-13211953)
chr4 (42-98)||(43639068-43639124)
chr4 (42-105)||(578826-578889)
chr4 (31-100)||(142677-142746)
chr4 (27-84)||(21519804-21519861)
chr4 (27-92)||(26958610-26958675)
chr4 (25-98)||(33811097-33811170)
chr4 (27-92)||(48560071-48560136)
chr4 (27-100)||(49425844-49425917)
chr4 (24-92)||(6214053-6214121)
chr4 (24-92)||(12584366-12584434)
chr4 (24-92)||(14202950-14203018)
chr4 (46-106)||(30820554-30820614)
chr4 (41-92)||(17181037-17181088)
chr4 (25-68)||(43639029-43639072)
chr4 (42-92)||(30258206-30258256)
chr4 (24-106)||(41172480-41172562)
chr4 (41-91)||(49970682-49970732)
chr4 (24-105)||(5157068-5157149)
chr4 (25-98)||(49606071-49606144)
chr4 (24-81)||(50182245-50182302)
chr4 (24-92)||(13621394-13621462)
chr4 (24-92)||(42807991-42808059)
chr4 (170-213)||(20459184-20459227)
chr4 (25-88)||(54742500-54742563)
chr4 (24-82)||(18470327-18470385)
chr4 (45-91)||(53975284-53975330)
chr4 (165-202)||(17377487-17377524)
chr4 (141-196)||(38425540-38425597)
chr4 (24-92)||(7630127-7630195)
chr4 (24-92)||(13371281-13371349)
chr4 (24-92)||(13381482-13381550)
chr4 (170-214)||(16553390-16553434)
chr4 (24-92)||(17377563-17377631)
chr4 (170-202)||(17745369-17745401)
chr4 (142-204)||(33811285-33811349)
chr4 (41-92)||(51784048-51784100)
[»] chr1 (54 HSPs)
chr1 (25-98)||(5491674-5491747)
chr1 (27-100)||(51431898-51431971)
chr1 (25-100)||(463383-463458)
chr1 (25-100)||(8643046-8643121)
chr1 (25-100)||(16005614-16005689)
chr1 (25-100)||(28454755-28454830)
chr1 (25-100)||(3979448-3979523)
chr1 (25-100)||(26843068-26843143)
chr1 (25-100)||(32994241-32994316)
chr1 (25-100)||(34515201-34515276)
chr1 (25-100)||(36389529-36389604)
chr1 (25-98)||(13264581-13264654)
chr1 (27-100)||(32151936-32152009)
chr1 (24-100)||(10764647-10764723)
chr1 (25-100)||(13157627-13157705)
chr1 (25-100)||(27787871-27787946)
chr1 (30-101)||(45818836-45818907)
chr1 (25-99)||(34306511-34306589)
chr1 (24-92)||(43236240-43236308)
chr1 (25-100)||(3273382-3273457)
chr1 (25-100)||(6192496-6192571)
chr1 (24-91)||(16960361-16960428)
chr1 (25-100)||(24770700-24770775)
chr1 (25-100)||(32156033-32156108)
chr1 (46-138)||(33676084-33676176)
chr1 (25-100)||(42199903-42199978)
chr1 (25-100)||(42208771-42208846)
chr1 (25-204)||(158373-158560)
chr1 (141-197)||(10368051-10368108)
chr1 (141-204)||(14387214-14387279)
chr1 (27-92)||(20201739-20201804)
chr1 (25-98)||(50559322-50559395)
chr1 (24-92)||(14387478-14387546)
chr1 (24-92)||(20411275-20411343)
chr1 (24-84)||(27389526-27389586)
chr1 (24-92)||(39424346-39424414)
chr1 (25-97)||(41146300-41146372)
chr1 (44-91)||(32144130-32144177)
chr1 (42-100)||(13157353-13157411)
chr1 (27-92)||(1805030-1805095)
chr1 (46-91)||(32152004-32152049)
chr1 (24-92)||(12864331-12864399)
chr1 (24-92)||(14494447-14494515)
chr1 (24-92)||(36817728-36817796)
chr1 (167-215)||(52772193-52772241)
chr1 (24-92)||(52772324-52772392)
chr1 (25-100)||(16073510-16073585)
chr1 (28-98)||(4158180-4158250)
chr1 (46-100)||(23413706-23413760)
chr1 (46-92)||(47130976-47131022)
chr1 (24-81)||(13943351-13943408)
chr1 (27-100)||(32144062-32144135)
chr1 (27-91)||(27348207-27348270)
chr1 (24-92)||(32716445-32716513)
[»] chr8 (49 HSPs)
chr8 (25-138)||(13269283-13269396)
chr8 (27-100)||(8258373-8258446)
chr8 (25-138)||(23544841-23544954)
chr8 (25-100)||(10616363-10616438)
chr8 (25-100)||(25127943-25128018)
chr8 (25-100)||(32069094-32069169)
chr8 (27-178)||(45299639-45299796)
chr8 (25-100)||(2823651-2823726)
chr8 (25-100)||(5946836-5946910)
chr8 (25-100)||(13468350-13468425)
chr8 (25-100)||(27545832-27545907)
chr8 (25-100)||(35550641-35550716)
chr8 (25-100)||(36899811-36899886)
chr8 (25-98)||(25123452-25123525)
chr8 (24-92)||(1783082-1783150)
chr8 (25-100)||(26042990-26043065)
chr8 (25-100)||(32486976-32487051)
chr8 (25-100)||(39934450-39934525)
chr8 (31-100)||(26630101-26630171)
chr8 (27-100)||(30207239-30207312)
chr8 (31-100)||(1201741-1201810)
chr8 (25-98)||(9413882-9413955)
chr8 (24-92)||(9483729-9483797)
chr8 (24-92)||(21442399-21442467)
chr8 (25-100)||(3369784-3369858)
chr8 (25-100)||(9483969-9484044)
chr8 (25-100)||(29125759-29125834)
chr8 (25-91)||(1281933-1281999)
chr8 (25-99)||(26867972-26868046)
chr8 (25-100)||(30633114-30633189)
chr8 (25-100)||(34103072-34103147)
chr8 (33-100)||(44874191-44874258)
chr8 (27-84)||(19971483-19971540)
chr8 (27-84)||(21021273-21021330)
chr8 (27-92)||(31071633-31071698)
chr8 (24-92)||(21442209-21442276)
chr8 (25-100)||(35067073-35067149)
chr8 (46-100)||(184178-184232)
chr8 (165-215)||(1783175-1783225)
chr8 (42-92)||(14826358-14826408)
chr8 (25-75)||(42556759-42556809)
chr8 (25-98)||(13290570-13290643)
chr8 (141-204)||(29377906-29377971)
chr8 (141-204)||(42556643-42556708)
chr8 (27-72)||(45299698-45299743)
chr8 (141-215)||(30207117-30207193)
chr8 (27-91)||(32512114-32512178)
chr8 (141-215)||(39922445-39922521)
chr8 (24-92)||(41942937-41943004)
[»] chr7 (45 HSPs)
chr7 (25-204)||(18352274-18352461)
chr7 (25-100)||(25818535-25818610)
chr7 (25-100)||(41407393-41407468)
chr7 (25-204)||(28912133-28912319)
chr7 (25-101)||(2936691-2936767)
chr7 (28-100)||(9401726-9401798)
chr7 (25-100)||(938946-939021)
chr7 (25-100)||(38796894-38796969)
chr7 (27-100)||(27168292-27168365)
chr7 (25-139)||(454155-454268)
chr7 (24-92)||(14777978-14778046)
chr7 (24-92)||(15230116-15230184)
chr7 (24-92)||(48454623-48454691)
chr7 (24-91)||(32852908-32852975)
chr7 (25-97)||(11766172-11766244)
chr7 (25-100)||(15957283-15957359)
chr7 (24-92)||(38876246-38876314)
chr7 (25-98)||(2362803-2362873)
chr7 (25-100)||(2509391-2509465)
chr7 (25-96)||(19069447-19069518)
chr7 (27-106)||(24720315-24720394)
chr7 (25-88)||(38367938-38368001)
chr7 (25-92)||(45225312-45225379)
chr7 (31-100)||(6736580-6736650)
chr7 (25-91)||(41037409-41037475)
chr7 (25-100)||(2633963-2634035)
chr7 (27-92)||(20516974-20517039)
chr7 (27-91)||(8048048-8048112)
chr7 (24-92)||(12080750-12080818)
chr7 (24-84)||(37139022-37139082)
chr7 (24-91)||(14770126-14770193)
chr7 (24-91)||(15220577-15220644)
chr7 (25-99)||(23740089-23740164)
chr7 (25-92)||(45225445-45225512)
chr7 (27-84)||(22479260-22479317)
chr7 (24-84)||(7437885-7437945)
chr7 (24-92)||(11327647-11327715)
chr7 (24-92)||(14719072-14719140)
chr7 (24-92)||(27811993-27812061)
chr7 (24-92)||(34986576-34986644)
chr7 (167-215)||(48454492-48454540)
chr7 (24-91)||(28605493-28605560)
chr7 (41-92)||(48193221-48193272)
chr7 (42-84)||(27597089-27597131)
chr7 (24-92)||(4655096-4655164)
[»] chr5 (47 HSPs)
chr5 (25-100)||(17421729-17421804)
chr5 (25-100)||(31752151-31752226)
chr5 (25-100)||(6261063-6261138)
chr5 (25-100)||(25912114-25912189)
chr5 (25-100)||(28747797-28747872)
chr5 (25-138)||(2528802-2528916)
chr5 (31-99)||(17233345-17233413)
chr5 (28-100)||(33696091-33696163)
chr5 (25-101)||(39548911-39548987)
chr5 (25-100)||(7944323-7944398)
chr5 (25-100)||(14369802-14369877)
chr5 (27-98)||(17232990-17233061)
chr5 (25-100)||(31240316-31240391)
chr5 (31-100)||(22800713-22800782)
chr5 (25-100)||(3038922-3038997)
chr5 (25-100)||(4083773-4083848)
chr5 (28-99)||(12910095-12910166)
chr5 (25-98)||(6436458-6436531)
chr5 (24-92)||(30687995-30688063)
chr5 (25-100)||(4737967-4738042)
chr5 (25-100)||(10951090-10951165)
chr5 (25-99)||(8410691-8410765)
chr5 (27-92)||(15809012-15809077)
chr5 (25-100)||(2695168-2695242)
chr5 (46-100)||(13711104-13711158)
chr5 (25-138)||(9124737-9124851)
chr5 (27-92)||(27005160-27005225)
chr5 (31-96)||(39038560-39038625)
chr5 (170-218)||(1951380-1951428)
chr5 (24-92)||(29302185-29302253)
chr5 (44-92)||(37282237-37282285)
chr5 (41-92)||(17605096-17605147)
chr5 (25-100)||(22701816-22701890)
chr5 (27-90)||(33026269-33026332)
chr5 (25-99)||(33832751-33832826)
chr5 (45-92)||(37249361-37249408)
chr5 (165-215)||(14795641-14795691)
chr5 (44-90)||(17209958-17210004)
chr5 (44-98)||(40234162-40234216)
chr5 (27-92)||(3960718-3960783)
chr5 (170-215)||(12910212-12910257)
chr5 (27-99)||(30667621-30667693)
chr5 (141-204)||(32736416-32736481)
chr5 (24-92)||(1921498-1921566)
chr5 (24-92)||(1951513-1951581)
chr5 (24-92)||(11448771-11448839)
chr5 (24-92)||(33282294-33282362)
[»] chr6 (27 HSPs)
chr6 (25-97)||(33730568-33730640)
chr6 (25-216)||(4898075-4898274)
chr6 (25-99)||(14488345-14488419)
chr6 (27-100)||(30525425-30525498)
chr6 (25-100)||(4898517-4898592)
chr6 (25-204)||(18102735-18102922)
chr6 (25-100)||(18154591-18154666)
chr6 (25-218)||(25061701-25061900)
chr6 (24-92)||(20755436-20755504)
chr6 (24-92)||(29646265-29646333)
chr6 (24-92)||(31132957-31133025)
chr6 (31-204)||(15718261-15718442)
chr6 (24-84)||(1369987-1370047)
chr6 (24-92)||(4184340-4184408)
chr6 (28-100)||(11742372-11742444)
chr6 (27-106)||(26211344-26211423)
chr6 (42-92)||(9955876-9955926)
chr6 (27-92)||(8171928-8171993)
chr6 (24-92)||(11100461-11100529)
chr6 (24-84)||(16599158-16599218)
chr6 (24-92)||(27828392-27828460)
chr6 (25-100)||(3438064-3438139)
chr6 (25-91)||(11100103-11100170)
chr6 (22-92)||(15962818-15962888)
chr6 (22-92)||(26667946-26668016)
chr6 (24-84)||(10778032-10778092)
chr6 (171-215)||(16599263-16599307)
[»] scaffold0418 (1 HSPs)
scaffold0418 (25-100)||(5733-5808)
[»] scaffold0015 (1 HSPs)
scaffold0015 (25-97)||(9807-9879)
[»] scaffold0217 (1 HSPs)
scaffold0217 (25-100)||(20691-20766)
[»] scaffold0068 (1 HSPs)
scaffold0068 (27-102)||(57947-58022)
[»] scaffold1808 (1 HSPs)
scaffold1808 (26-100)||(615-689)
[»] scaffold0627 (1 HSPs)
scaffold0627 (25-98)||(4110-4182)
[»] scaffold0325 (1 HSPs)
scaffold0325 (25-100)||(6589-6664)
[»] scaffold0002 (1 HSPs)
scaffold0002 (25-92)||(452446-452513)
[»] scaffold0119 (2 HSPs)
scaffold0119 (22-92)||(2777-2847)
scaffold0119 (22-92)||(14832-14902)
[»] scaffold1717 (1 HSPs)
scaffold1717 (141-215)||(1329-1405)
[»] scaffold1527 (1 HSPs)
scaffold1527 (141-215)||(1575-1651)


Alignment Details
Target: chr2 (Bit Score: 346; Significance: 0; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 31 - 548
Target Start/End: Complemental strand, 23664887 - 23664363
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgttttaac 130  Q
    ||||||||| ||||||||| |||| || ||||||||||||||||| ||||||||||||||| |||||||  |||||       | || ||||||||||||    
T  23664887 taaaacacaccttctaaaatataagtgggtgtattctagcaaatgcctataggagttgctaacatacactcatttatttttttagaaggtgtgttttaac 23664788  T
Q  131 aacattcat------atgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacctcagtag 222  Q
    ||||||||       ||||||||||||| |||| | ||| |||||| ||||||||||||  |||||||||||||  || |||  || |||||   | |||    
T  23664787 aacattcaccttaaaatgtatttaacaattttttaattatatctttgctaaaacactcca-cataaaaactagttggtatatcctagcaaactcgaatag 23664689  T
Q  223 aatatgccactaaataggagaaaatctcttaattattggttggcaagtggagtccatttgacccaccatttacctgaccaaaagccacagatacttgtcg 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23664688 aatatgccactaaataggagaaaatctcttaattattggttggcaagtggagtccatttgacccaccatgtacctgaccaaaagccacagatacttgtcg 23664589  T
Q  323 ttttcaatttctgggtaaaagggtgactcttcatatatcaatatccttttggatatcataacattttcatataataaacctaaaagttaaattgacataa 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664588 ttttcaatttctgggtaaaagggtgactcttcatatatcaatatccttttggatatcataacattttcatataataaacctaaaagttaaattgacataa 23664489  T
Q  423 catcctcaaactttttatttaacgtattcttttgtattattacaattcatgctacaaacgactttcccagatatcaaaagtggcatcaattttaatcaaa 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664488 catcctcaaactttttatttaacgtattcttttgtattattacaattcatgctacaaacgactttcccagatatcaaaagtggcatcaattttaatcaaa 23664389  T
Q  523 tattgcatcaatttggattatttttc 548  Q
    |||||||| ||||||||| |||||||    
T  23664388 tattgcattaatttggataatttttc 23664363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 34082711 - 34082525
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||| | |||       | |||||||||    
T  34082711 acttgctaaaacacaccttctaaaaaataaatgggtgtatcctagcaaatgcctataggagttgctaacatacacccactta-ttttttagaatgtgtgt 34082613  T
Q  125 tttaacaacattca---ta---tgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||| |||||||||   ||   ||||||||||||| ||||||||| |||||| ||||||||| ||   ||||||||||||| ||||||    
T  34082612 tttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgtat 34082525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 33739691 - 33739616
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||||||||| ||||||||||||||| ||||||||    
T  33739691 acttgctaaaacacaccttctaaaaaataagtggatgtattctagcaaatgcctataggagttgctaacatacacc 33739616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 16075093 - 16075170
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaa 102  Q
    ||||||||||||||| |||||||||||||| || |||||| |||| ||||| ||| ||||||||||| ||||||||||    
T  16075093 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagtaaatgcctacaggagttgctaacatacaccaa 16075170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 11675297 - 11675221
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||||||||||| ||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  11675297 acttgctaaaacacaccttctaaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 11675221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 13002071 - 13002147
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||||  | ||||||| ||||||||| ||||||||||||||| ||||||||    
T  13002071 cacttgctaaaacactccttctaaaaaataagagggtgtattttagcaaatgcctataggagttgctaacatacacc 13002147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 18370376 - 18370301
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||| ||||| ||| ||||||||    
T  18370376 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgactataagagtttctaacatacacc 18370301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 33173549 - 33173614
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  33173549 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctag 33173614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 1750239 - 1750315
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacca 101  Q
    |||| |||||||||| |||||||||| ||| || |||||||||||||||||  | |||||||||||| |||||||||    
T  1750239 acttactaaaacacaccttctaaaaattaagtgggtgtattctagcaaatgcatgtaggagttgctaacatacacca 1750315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 8386844 - 8386768
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| ||||| ||||||| ||| || |||||||||||||||||  |||||||||||||| ||||||||    
T  8386844 acttgctaaaacatatcttgtaaaaaaataagtgggtgtattctagcaaatgcatataggagttgctaacatacacc 8386768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 17265413 - 17265353
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagtt 87  Q
    ||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||||||    
T  17265413 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggagtt 17265353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 39906429 - 39906361
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  39906429 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 39906361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 44542897 - 44542964
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  44542897 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 44542964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 6332432 - 6332367
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  ||| |||||||||| || |||||||||||||||||||||||||| |||||||    
T  6332432 ttgctaaaatactccttttaaaaaataagtgggtgtattctagcaaatgtctataggatttgctag 6332367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 16513140 - 16513196
Alignment:
Q  44 ctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  16513140 ctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 16513196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 20939869 - 20939801
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  20939869 cacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 20939801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 39904701 - 39904769
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  39904701 cacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 39904769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 768594 - 768669
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| |||||| || |||||||||||||| |  ||||||  ||||||||| ||||||||||||||| ||||||||    
T  768594 acttgttaaaacgcaccttctaaaaaataagttggtgtatcgtagcaaatgcctataggagttgctaacatacacc 768669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 2586431 - 2586506
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaa 102  Q
    ||||||||| ||  |||||||||||||| |  ||||||||||||||||| |||||||| ||||||| | |||||||    
T  2586431 ttgctaaaatactccttctaaaaaataagtaggtgtattctagcaaatgcctataggatttgctagaacacaccaa 2586506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 9689535 - 9689460
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    |||||||||||| ||  |||||||||| ||| || |||||| |||||||||| |||||||| ||||||| ||||||    
T  9689535 cacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaatacac 9689460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 23387193 - 23387252
Alignment:
Q  41 cttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||| |  |||||| ||| |||||||||||||||||||||| ||||||||    
T  23387193 cttctaaaaaataagtaggtgtatcctaacaaatgtctataggagttgctaacatacacc 23387252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 37169700 - 37169625
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| || ||| ||||||||||  | ||||||||||||||||| ||||| | ||||||| ||||||||    
T  37169700 acttgctaaaacgcaccttttaaaaaataagagggtgtattctagcaaatgcctatatgggttgctaacatacacc 37169625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 42850160 - 42850085
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| |||||||||  || |||||||||| ||  |||||||||||||||| |||||||| |||||| ||||||||    
T  42850160 acttgttaaaacacactttttaaaaaataagtggatgtattctagcaaatgcctataggaattgctaacatacacc 42850085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 1576792 - 1576722
Alignment:
Q  30 ctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||  ||||||||||||| || ||| || ||||||||||  |||||||||||||| ||||||||    
T  1576792 ctaaaacacacattctaaaaaataagtgggtgcatcctagcaaatgattataggagttgctaacatacacc 1576722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 29512125 - 29512198
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa--taactgagtgtattctagcaaatgtctataggagttgctagcata 96  Q
    ||||||||||||||| |||||||||||  ||| || |||||| |||| |||||||||||| |||||||| ||||    
T  29512125 acttgctaaaacacaccttctaaaaaaaataagtgggtgtatcctagtaaatgtctatagaagttgctaacata 29512198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 7682163 - 7682088
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| ||  ||||||||||| || || ||||||||||||||||| |||||||| ||||||  |||||||    
T  7682163 cacttgctaaaatactccttctaaaaaa-aagtgggtgtattctagcaaatgcctataggatttgctaaaatacacc 7682088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 22302137 - 22302069
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||| ||||| || ||||||||||||||||| |||||||| |||||||    
T  22302137 cacttgctaaaatactcattctaaacaataagtgggtgtattctagcaaatgcctataggatttgctag 22302069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 9690300 - 9690249
Alignment:
Q  41 cttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||| || ||||||||||||||||| ||||| || |||||||    
T  9690300 cttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctag 9690249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 15554163 - 15554100
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattt 105  Q
    ||||||||||||| || |||||||||| |||||||| |||||| ||||||| | ||||| ||||    
T  15554163 ttctaaaaaataagtgggtgtattctaacaaatgtcaataggatttgctagaacacacccattt 15554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 23387064 - 23387105
Alignment:
Q  59 gtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||| |||||||||| ||||||||||||||| ||||||||    
T  23387064 gtgtatcctagcaaatgcctataggagttgctaacatacacc 23387105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 44257466 - 44257413
Alignment:
Q  165 ctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacctca 218  Q
    |||| ||||||||||||| ||||||||||| || || ||||||| |||||||||    
T  44257466 ctttgctaaaacactcccacataaaaactaatgggtttattttagcaaacctca 44257413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 44257505 - 44257562
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctata 81  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| |||||    
T  44257505 cacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctata 44257562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 45629760 - 45629683
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaa-cactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    ||||||||||||||||| ||||| ||||||  ||||| ||||||| |||||||||||||| ||||||| || ||||||    
T  45629760 tgtatttaacaactttttagttatatctttggtaaaaacactcccacataaaaactagtgggtgtattctagcaaacc 45629683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 1297596 - 1297564
Alignment:
Q  170 ctaaaacactcccgcataaaaactagtgagtgt 202  Q
    |||||||||||||| ||||||||||||||||||    
T  1297596 ctaaaacactcccgtataaaaactagtgagtgt 1297564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 39906468 - 39906520
Alignment:
Q  165 ctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacctc 217  Q
    |||| ||||||||||||| |||||||||||||| |||| || || ||||||||    
T  39906468 ctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacctc 39906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 41527945 - 41528021
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| |||||||||  |||||||||| ||| || ||||||| |||||||||||||||  |||||||| | ||||||    
T  41527945 acttgttaaaacacacattctaaaaaagtaagtgggtgtattatagcaaatgtctatataagttgctaacgtacacc 41528021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 33837962 - 33837765
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| | |||       | || ||||||    
T  33837962 acttgctaaaacacaccttctaaaaaataagtgagtgtatcctagcaaatgtctataggagttgctaacatacacccacttatttttttagaaggtgtgt 33837863  T
Q  125 tttaacaacattc------atatgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaac 214  Q
    |||| ||||||||      | |||||||||||||| ||||||||| |||||| ||||||||| ||   ||||||||||||| ||||||  ||||||||    
T  33837862 tttagcaacattcaccttaagatgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgtatcataacaaac 33837765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 31039709 - 31039635
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||    
T  31039709 acttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacac 31039635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 53581599 - 53581674
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || ||||||  ||||||||||||||||||||||||| ||||||||    
T  53581599 acttgctaaaacacaccttctaaaaaataagtgggtgtatcttagcaaatgtctataggagttgctaacatacacc 53581674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 50801614 - 50801688
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||    
T  50801614 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacac 50801688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 50874266 - 50874192
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||    
T  50874266 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacac 50874192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 32203193 - 32203386
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||||| ||||| ||||||||| |||||||| | |||       | ||||| |||    
T  32203193 acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctataagagttgctaacatacacccactta-ttttttagaatgtatgt 32203291  T
Q  125 tttaacaaca--ttcatatgtatttaacaa-cttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||| |||||  || |  ||||||||||||  ||||||||| |||||| ||||||||||||  ||||||||||| || ||||||  |||||||||    
T  32203292 tttagcaacaccttaaggtgtatttaacaattttttagttatatctttgctaaaacactccgacataaaaactaatgggtgtatcctaacaaacc 32203386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 53467503 - 53467426
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaa 102  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| | ||||||||| ||||||||||    
T  53467503 acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctacatgagttgctaacatacaccaa 53467426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 13349175 - 13349372
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||||||  |||||||||||||| || |||||| |||||||||| |||| |||||||||| |||||||| | |||       | || ||||||    
T  13349175 acttgctaaaacacgccttctaaaaaataagtgggtgtatcctagcaaatgcctattggagttgctaacatacacccactta-tattttagaaggtgtgt 13349273  T
Q  125 tttaacaacattca---ta---tgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||| |||||||||   ||   ||||||||||||| ||||||||| |||||| ||||||||| ||   ||||||||||||||||||||  |||||||||    
T  13349274 tttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgagtgtatcctaacaaacc 13349372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 27317679 - 27317754
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| ||  |||||||||||||||| ||||||||||||||| ||||||||    
T  27317679 acttgctaaaacacaccttttaaaaaataagtggatgtattctagcaaatgcctataggagttgctaacatacacc 27317754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 12127584 - 12127656
Alignment:
Q  28 tgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| |||||||||||||| || |||||| |||| ||||| ||||||||||||||| ||||||||    
T  12127584 tgctaaaacacaccttctaaaaaataagtgggtgtatcctagaaaatgcctataggagttgctaacatacacc 12127656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 50913147 - 50913071
Alignment:
Q  30 ctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattta 106  Q
    |||||||||| |||||||||| ||| || ||||||||||||||||| || |||||||||||| |||||||| |||||    
T  50913147 ctaaaacacaccttctaaaaattaagtgggtgtattctagcaaatgcctgtaggagttgctaacatacacccattta 50913071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 1376150 - 1376075
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| ||  ||||| |||||||||| ||||||||||||||| ||||||||    
T  1376150 acttgctaaaacacacattctaaaaaataagtggatgtatcctagcaaatgcctataggagttgctaacatacacc 1376075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 6114827 - 6114894
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  6114827 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctag 6114894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 8814818 - 8814893
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||||||  ||||| |||||||| ||||||||    
T  8814818 acttgctaaaacacaccttcaaaaaaataagtgggtgtattctagcaaatgcttatagaagttgctaacatacacc 8814893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 27360036 - 27360110
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| ||  |||||||||||||||| ||||||||||||||| ||||||||    
T  27360036 acttgctaaaacacaccttataaaaaataagtggatgtattctagcaaatg-ctataggagttgctaacatacacc 27360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 48765365 - 48765183
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    |||| |||||||||| |||||||||||||| || ||||||| |||||||| || |||||||||| || |||||||| | |||        ||| ||||||    
T  48765365 acttactaaaacacaccttctaaaaaataaatgggtgtattttagcaaatatccataggagttgttaacatacacccacttattttgtagaaa-gtgtgt 48765267  T
Q  125 tttaa---caacattcat------atgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtg 197  Q
    ||||    |||||||||       |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  48765266 tttagtagcaacattcaccttaagatgtatttaacaactttttagttatatctttactaaaacactcccacataaaaactagtg 48765183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 7848572 - 7848640
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  7848572 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 7848640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 17605513 - 17605585
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatac 97  Q
    ||||||||||||| | |||||||||||||| || |||||| ||||||||||  |||||||||||||| |||||    
T  17605513 acttgctaaaacaaaccttctaaaaaataagtgggtgtatcctagcaaatgcatataggagttgctaacatac 17605585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 34277630 - 34277558
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||| ||  |||||||||||||| || |||||||||| |||| ||||||||||||||||| ||||||||    
T  34277630 ttgctaaaatactccttctaaaaaataagtgggtgtattcta-caaacgtctataggagttgctaacatacacc 34277558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 11460195 - 11460263
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||| ||||||||||||| |||||||| |||||||    
T  11460195 cacttgctaaaatactccttctaaaaaataagtgggtgcattctagcaaatgcctataggatttgctag 11460263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 22894679 - 22894623
Alignment:
Q  44 ctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| || |||||| ||||||||||| |||||||||||||| ||||||||    
T  22894679 ctaaaaaataagtgggtgtatcctagcaaatgtttataggagttgctaacatacacc 22894623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 26158382 - 26158314
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| |  ||||||||||||||||| |||||||| |||||||    
T  26158382 cacttgctaaaatactccttctaaaaaataagtaggtgtattctagcaaatgcctataggatttgctag 26158314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 36823995 - 36824108
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||||||| ||||||||||| || |   |||||||||||||||| |||| |||||| ||| |||||||| | |||       | |||||||||    
T  36823995 acttgctaaaacacaccttctaaaaaacaagttcttgtattctagcaaatgcctattggagttactaacatacacccactta-ttttttagaatgtgtgt 36824093  T
Q  125 tttaacaacattcat 139  Q
    |||||||||||||||    
T  36824094 tttaacaacattcat 36824108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 37504586 - 37504654
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||| |||||| ||  |||||||||||||| || |||||||||| ||||||||||||||| |||||||    
T  37504586 cactttctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgtctataggatttgctag 37504654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 45059682 - 45059614
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || |||||| ||||||||||||||||||| |||||||    
T  45059682 cacttgctaaaatactcattctaaaaaataagtgggtgtatcctagcaaatgtctataggatttgctag 45059614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 21727691 - 21727758
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||| ||  |||||||||||||| || ||||||||||||||||| || ||||| |||||||    
T  21727691 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctgtaggatttgctag 21727758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 3269413 - 3269487
Alignment:
Q  28 tgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaa 102  Q
    |||||||||| |  ||||||||||||| || |||||| ||||||||||  ||||||||||| || ||||||||||    
T  3269413 tgctaaaacagacattctaaaaaataagtgtgtgtatcctagcaaatgcatataggagttggtaacatacaccaa 3269487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 7521421 - 7521479
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| || |||||||||| |||||| |||||||| ||||||| |||||||    
T  7521421 ttctaaaaaataagtgggtgtattctaacaaatgcctataggatttgctagaatacacc 7521479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 994868 - 994811
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| ||||||||    
T  994868 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagga 994811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 3544294 - 3544257
Alignment:
Q  165 ctttactaaaacactcccgcataaaaactagtgagtgt 202  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3544294 ctttactaaaacactcccacataaaaactagtgagtgt 3544257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 3544333 - 3544410
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| ||  ||||||||||| ||| || ||||||||||||||||| ||||| || ||||||| |||||||    
T  3544333 cacttgctaaaatactccttctaaaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaatacacc 3544410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 17065774 - 17065839
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || ||  |||||||||||||||||||||| |||||||    
T  17065774 ttgctaaaatactccttctaaaaaataagtgggtacattctagcaaatgtctataggatttgctag 17065839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 51952246 - 51952315
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  ||||||||||| ||| || ||||||||||||||||| |||||||| |||||||    
T  51952246 cacttgctaaaatactccttctaaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 51952315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 2868313 - 2868245
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||||   ||||||||||||| || |||||| |||||||||| ||||| || |||||||    
T  2868313 cacttgctaaaacactcattctaaaaaataagtgggtgtatcctagcaaatgcctatatgatttgctag 2868245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 4043673 - 4043733
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    |||||||||||| ||  |||||||||||||| |  ||||||||||||||||| ||||||||    
T  4043673 cacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctatagga 4043733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 6109314 - 6109246
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| ||||| || |||||||    
T  6109314 cacttgctaaaatactcattctaaaaaataaatgggtgtattctagcaaatgcctatatgatttgctag 6109246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 6748799 - 6748731
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  ||||||||||| || || |||||||||||||||||  ||||||| |||||||    
T  6748799 cacttgctaaaatactccttctaaaaaagaagtgggtgtattctagcaaatgcttataggatttgctag 6748731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 47461739 - 47461807
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| || |||||| |||||||||| |||||||| |||||||    
T  47461739 cacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctag 47461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 17226324 - 17226273
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatg 75  Q
    |||||||||||| |  ||||||||||||||| || |||||||||||||||||    
T  17226324 cacttgctaaaatatttcttctaaaaaataagtgggtgtattctagcaaatg 17226273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 12896682 - 12896750
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||| ||||| ||| || |||||| |||||||||| |||||||| |||||||    
T  12896682 cacttgctaaaatactccttccaaaaattaagtgggtgtatcctagcaaatgcctataggatttgctag 12896750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 26103767 - 26103694
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| ||| |||||||||||||| || |||  | || |||||||  |||||||||||||| ||||||||    
T  26103767 acttgctaaaagacaccttctaaaaaataagtgggtg--tcctggcaaatgcatataggagttgctaacatacacc 26103694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 26152388 - 26152440
Alignment:
Q  166 tttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacctca 218  Q
    ||||||||||||||||| |||||||||||||| || | || || |||||||||    
T  26152388 tttactaaaacactcccacataaaaactagtgggtatgttctagcaaacctca 26152440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 38798023 - 38798091
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||| ||||| ||  |||||||||||||| ||  |||||| ||||||||| |||||||| |||||||    
T  38798023 cacttgttaaaatactccttctaaaaaataagtggatgtattttagcaaatgcctataggatttgctag 38798091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 38798178 - 38798210
Alignment:
Q  170 ctaaaacactcccgcataaaaactagtgagtgt 202  Q
    |||||||||||||||||||||||||||| ||||    
T  38798178 ctaaaacactcccgcataaaaactagtgggtgt 38798210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 51952216 - 51952184
Alignment:
Q  165 ctttactaaaacactcccgcataaaaactagtg 197  Q
    |||||||||||||||||| ||||||||||||||    
T  51952216 ctttactaaaacactcccacataaaaactagtg 51952184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 6946697 - 6946889
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||| | |||       | || ||||||    
T  6946697 acttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacccactta-ttttttagaaggtgtgt 6946795  T
Q  125 tttaacaacattca-tatgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||| |||||||||  |||||||||||||| ||||||||| |||||||| ||||||| ||   |||||||||||||  |||||  |||||||||    
T  6946796 tttagcaacattcaccatgtatttaacaactttttagttatatctttaccaaaacacaccttaataaaaactagtggatgtatcctaacaaacc 6946889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 38425811 - 38425636
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    |||||||||||||||  ||||||||||||| || |||| |||||||||||| ||||||||||||||| |||||||| | |||       |||||||||||    
T  38425811 acttgctaaaacacacattctaaaaaataaatgggtgtgttctagcaaatgcctataggagttgctaacatacacccactta-ttttttaaaatgtgtgt 38425713  T
Q  125 tttaacaacattca---ta---tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaact 193  Q
    ||||||||||||||   ||   ||||||||||||||||| ||||| |||||| ||||||||||||  ||||||||||    
T  38425712 tttaacaacattcaccttaaggtgtatttaacaacttttcagttatatctttgctaaaacactccaacataaaaact 38425636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 20458992 - 20458917
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||| ||||||||||||||| ||||||||    
T  20458992 acttgctaaaacacatcttctaaaaaataagtgggtatattctagcaaatgcctataggagttgctaacatacacc 20458917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 6137658 - 6137583
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||| |||||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  6137658 acttactaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 6137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 6193115 - 6193040
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||  |||||| ||||||| ||||||||    
T  6193115 acttgctaaaacacaccttctaaaaaataagtgagtgtattctagcaaatgcttataggtgttgctaacatacacc 6193040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 40496302 - 40496227
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||    
T  40496302 acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgtctataggagttgctaacttacacc 40496227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 36955409 - 36955485
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacca 101  Q
    |||||||||||||||  || |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  36955409 acttgctaaaacacacattataaaaaataagtgagtgtattctagcaaatgcctatatgagttgctaacatacacca 36955485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 9744291 - 9744216
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| |||||||||||||||  |||||||    
T  9744291 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaatatacacc 9744216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 14863025 - 14863099
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  14863025 acttgctaaaacaca-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 14863099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 16553477 - 16553552
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| ||  |||||||||||||||| ||||||||||||||| ||||||||    
T  16553477 acttgctaaaacacactttctaaaaaataagtggatgtattctagcaaatgcctataggagttgctaacatacacc 16553552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 26335793 - 26335868
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| ||| |||||| ||||||||||||||| ||||||||    
T  26335793 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgctaacatacacc 26335868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 33105964 - 33106039
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| || | |||| |||||||||||||||||||||||||| ||||||||    
T  33105964 acttgctaaaacacaccttttaaaaaataagtgggcgtatcctagcaaatgtctataggagttgctaacatacacc 33106039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 52437585 - 52437518
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||||||| |||||||||||||| || |||||| ||| |||||||||||||||||||||||    
T  52437585 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaaatgtctataggagttgctag 52437518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 15725231 - 15725305
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    |||| |||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||    
T  15725231 acttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacac 15725305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 29102037 - 29102111
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||||||||||||||||| |||||||||| || |||||| ||||||||||| ||||||||||| || |||||||    
T  29102037 acttgctaaaacacatcttataaaaaataagtgggtgtatcctagcaaatgtttataggagttgttaacatacac 29102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 5046788 - 5046720
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  5046788 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctag 5046720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 4490717 - 4490792
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||| || ||  |||||| || ||||||| ||||||||||||||||||||||||| ||||||||    
T  4490717 acttgctaaaacacatattttaggaaataagtgggtgtattatagcaaatgtctataggagttgctaacatacacc 4490792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 4712709 - 4712784
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || ||||||| |||| |||| ||||||||||||||| | ||||||    
T  4712709 acttgctaaaacacaccttctaaaaaataagtgggtgtattttagcgaatgcctataggagttgctaacttacacc 4712784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 11777655 - 11777580
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||| |||||||||| |||||||||||||| || |||||| ||||||||||  |||||||||||||| ||||||||    
T  11777655 acttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcttataggagttgctaacatacacc 11777580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 23384082 - 23384007
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| |||||| || |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  23384082 acttgttaaaacgcaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 23384007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 46106726 - 46106801
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || |||||| |||||||||| |||| |||||||||| ||||||||    
T  46106726 acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctattggagttgctaacatacacc 46106801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 52306829 - 52306895
Alignment:
Q  34 aacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||| |||||||||||||| |  |||||| |||||||||||||||||||||||||| ||||||||    
T  52306829 aacacaccttctaaaaaataagtaggtgtatcctagcaaatgtctataggagttgctaacatacacc 52306895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 45875813 - 45875886
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||  ||| ||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  45875813 ttgctaaaacacacattcaaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 45875886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 3818814 - 3818882
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || |||||||||||||||||| ||||||| |||||||    
T  3818814 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtttataggatttgctag 3818882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 10216399 - 10216331
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  10216399 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 10216331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 13211885 - 13211953
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  13211885 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 13211953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 43639068 - 43639124
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||    
T  43639068 ttctaaaaaataagtgggtgtattctaacaaatgtctataggagttgctaacataca 43639124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 578889 - 578826
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattt 105  Q
    ||||||||||||| || ||||||||||||||||| |||||||| ||||||| ||||||| ||||    
T  578889 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaatacacccattt 578826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 142677 - 142746
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||  ||| ||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  142677 taaaacacacattcaaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 142746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 21519804 - 21519861
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    ||||||||| || ||||||||||||||| || ||||||||||||||||| ||||||||    
T  21519804 ttgctaaaatacttcttctaaaaaataagtgggtgtattctagcaaatgcctatagga 21519861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 26958610 - 26958675
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||  ||||||||||||| || ||||||||||||||||| ||||| || |||||||    
T  26958610 ttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctatatgatttgctag 26958675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 33811097 - 33811170
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    |||||||||||||||  ||||||||| ||| || ||||||| ||||||||| || |||||||||||| ||||||    
T  33811097 acttgctaaaacacactttctaaaaattaagtgggtgtattatagcaaatgcctgtaggagttgctaacataca 33811170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 48560071 - 48560136
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  48560071 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 48560136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 49425917 - 49425844
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| |||||||||||||| |  |||||| |||||||||| |||||| |||||||| | ||||||    
T  49425917 ttgctaaaacacaccttctaaaaaataagtaggtgtatcctagcaaatgcctatagaagttgctaacgtacacc 49425844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 6214053 - 6214121
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| || ||||||||||| ||| || |||||| |||||||||| |||||||| |||||||    
T  6214053 cacttgctaaaatacttcttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctag 6214121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 12584434 - 12584366
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||| | |||||||    
T  12584434 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctag 12584366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 14203018 - 14202950
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  14203018 cacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 14202950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 30820614 - 30820554
Alignment:
Q  46 aaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattta 106  Q
    ||||||||| || |||| |||||||||||| |||||||| ||||||| |||||||||||||    
T  30820614 aaaaaataagtgggtgtcttctagcaaatgcctataggatttgctagaatacaccaattta 30820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 17181037 - 17181088
Alignment:
Q  41 cttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  17181037 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 17181088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 43639029 - 43639072
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattcta 68  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  43639029 acttgctaaaacacatcttctaaaaaataagtgggtgtattcta 43639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 30258256 - 30258206
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  30258256 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 30258206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 41172480 - 41172562
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattta 106  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| ||||| || ||||||| | ||||| |||||    
T  41172480 cacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaacacacccattta 41172562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 49970682 - 49970732
Alignment:
Q  41 cttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    |||||||||||||| || ||||||||||||||||| |||||||| ||||||    
T  49970682 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgcta 49970732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 5157068 - 5157149
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattt 105  Q
    ||||| |||||| ||  |||||||||||||| || ||||||||||||||| | |||||||| ||||||| | ||||| ||||    
T  5157068 cacttactaaaatactccttctaaaaaataagtgggtgtattctagcaaaggcctataggatttgctagaacacacccattt 5157149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 49606071 - 49606144
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    |||||||||||| || |||||||||||||| || |||||| ||||||||||  ||||| || ||||| ||||||    
T  49606071 acttgctaaaacgcaccttctaaaaaataagtgggtgtatcctagcaaatgcatatagaagctgctaacataca 49606144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 50182245 - 50182302
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctata 81  Q
    |||||||||||| ||  |||||||||||||| ||||||||||||| |||||| |||||    
T  50182245 cacttgctaaaatactgcttctaaaaaataagtgagtgtattctaacaaatgcctata 50182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 13621462 - 13621394
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || |||||| |||||||||| |||||||| |||||||    
T  13621462 cacttgctaaaatactcattctaaaaaataagtgggtgtatcctagcaaatgcctataggatttgctag 13621394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 42808059 - 42807991
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| || |||||| |||||||||| |||||||| |||||||    
T  42808059 cacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctag 42807991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 20459184 - 20459227
Alignment:
Q  170 ctaaaacactcccgcataaaaactagtgagtgtattttaacaaa 213  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||    
T  20459184 ctaaaacactcccacataaaaactagtgggtgtattctaacaaa 20459227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 54742500 - 54742563
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttg 88  Q
    |||||||||||||||  |||||||| |||| || ||||||| ||||||||| ||||| ||||||    
T  54742500 acttgctaaaacacacattctaaaatataagtgggtgtattttagcaaatgcctataagagttg 54742563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 18470327 - 18470385
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatag 82  Q
    |||||||||||| ||  |||||||||||||| || |||||||||| |||||| ||||||    
T  18470327 cacttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatggctatag 18470385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 53975330 - 53975284
Alignment:
Q  45 taaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||| |||||| ||||||||||||||||||| | ||||||||||||    
T  53975330 taaaacataactaagtgtattctagcaaatgtatgtaggagttgcta 53975284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 17377524 - 17377487
Alignment:
Q  165 ctttactaaaacactcccgcataaaaactagtgagtgt 202  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  17377524 ctttgctaaaacactcccgcataaaaactagtgggtgt 17377487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 38425597 - 38425540
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagt 196  Q
    ||||||||||||||||| ||||| || ||||||||||||||||  |||||||||||||    
T  38425597 tgtatttaacaactttttagttatatttttactaaaacactccaacataaaaactagt 38425540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 7630127 - 7630195
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||  ||| || |||||| |||||||||| |||||||| |||||||    
T  7630127 cacttgctaaaatactccttctaaaatctaagtgggtgtatcctagcaaatgcctataggatttgctag 7630195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 13371281 - 13371349
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||| |||||| ||  ||||||||| |||| ||  |||||||||||||||| |||||||| |||||||    
T  13371281 cacttactaaaatactccttctaaaacataagtggttgtattctagcaaatgcctataggatttgctag 13371349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 13381482 - 13381550
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||| |||||| ||  ||||||||| |||| ||  |||||||||||||||| |||||||| |||||||    
T  13381482 cacttactaaaatactccttctaaaacataagtggttgtattctagcaaatgcctataggatttgctag 13381550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16553434 - 16553390
Alignment:
Q  170 ctaaaacactcccgcataaaaactagtgagtgtattttaacaaac 214  Q
    |||||||||| || |||||||||||||| ||||||| ||||||||    
T  16553434 ctaaaacacttccacataaaaactagtgggtgtattctaacaaac 16553390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 17377563 - 17377631
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| || |||||| |||||||| | |||||||| |||||||    
T  17377563 cacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaaagcctataggatttgctag 17377631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 17745369 - 17745401
Alignment:
Q  170 ctaaaacactcccgcataaaaactagtgagtgt 202  Q
    ||||||||||||| |||||||||||||||||||    
T  17745369 ctaaaacactcccacataaaaactagtgagtgt 17745401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 33811285 - 33811349
Alignment:
Q  142 gtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||||||||||||||| ||||| || ||| ||||||||||||| |||||||| ||||| ||||||    
T  33811285 gtatttaacaactttttagttatatttttgctaaaacactcccacataaaaattagtgggtgtat 33811349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 51784100 - 51784048
Alignment:
Q  41 cttctaaaaaataact-gagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||| | | ||||||||||||||||| |||||||| |||||||    
T  51784100 cttctaaaaaataagtagggtgtattctagcaaatgcctataggatttgctag 51784048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 5491747 - 5491674
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  5491747 acttgctaaaacacaccttctaaaaaataagtgagtgtattctagtaaatgtctataggagttgctaacataca 5491674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 51431898 - 51431971
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||    
T  51431898 ttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtctataggagttcctaacatacacc 51431971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 463458 - 463383
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  463458 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 463383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 8643046 - 8643121
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||||||| ||||||||    
T  8643046 acttgctaaaacacatcttctaaaaaataagtgggtgtattatagcaaatgcgtataggagttgctaacatacacc 8643121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 16005614 - 16005689
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  16005614 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 16005689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 28454755 - 28454830
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  28454755 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 28454830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 3979523 - 3979448
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| |||| |||| |||||||||||||| || ||||||| ||||||||||||||||||||||||| ||||||||    
T  3979523 acttgttaaagcacaccttctaaaaaataagtgggtgtattatagcaaatgtctataggagttgctaacatacacc 3979448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 26843143 - 26843068
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| || |||||    
T  26843143 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacacacacc 26843068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 32994316 - 32994241
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| | ||| || |||||| ||||||||    
T  32994316 acttgctaaaacacatattctaaaaaataaatgagtgtattctagcaaatggccatatgatttgctaacatacacc 32994241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 34515276 - 34515201
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| || |||||||||| |||||| ||||||||||||||| ||||||||    
T  34515276 acttgctaaaacacaccttttaaaaaataagtgggtgtattctaacaaatgcctataggagttgctaacatacacc 34515201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 36389604 - 36389529
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  36389604 acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 36389529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 13264581 - 13264654
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||| ||||||||| ||||||    
T  13264581 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatatgagttgctaacataca 13264654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 32152009 - 32151936
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| |||||||||||||| || |||||| ||||||||||  |||||||||||||| ||||||||    
T  32152009 ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcatataggagttgctaacatacacc 32151936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 10764647 - 10764723
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||| |||||| |||||||||||| | || ||||||||||| ||||||||||| ||||||||| ||||||||    
T  10764647 cacttgctataacacaccttctaaaaaatgagtgggtgtattctagaaaatgtctataagagttgctaacatacacc 10764723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 13157705 - 13157627
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagg---agttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||   |||||||| ||||||||    
T  13157705 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgtctataggatcagttgctaacatacacc 13157627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 27787946 - 27787871
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||  ||||| ||||||||| ||||||||    
T  27787946 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaattcctataagagttgctaacatacacc 27787871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 45818836 - 45818907
Alignment:
Q  30 ctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacca 101  Q
    ||||| |||| |||||||||||||| || ||||||| ||||||||||||||| ||||||||| |||||||||    
T  45818836 ctaaagcacaacttctaaaaaataagtgggtgtattatagcaaatgtctatatgagttgctaacatacacca 45818907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 34306589 - 34306511
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataa----ctgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    |||||||||| |||| ||||||||||||||     |||||||||||||||||||| ||||||||||||||| |||||||    
T  34306589 acttgctaaagcacaacttctaaaaaataagtgggtgagtgtattctagcaaatgcctataggagttgctaacatacac 34306511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 43236308 - 43236240
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| || ||||||||||||||| || |||||| |||||||||| |||||||| |||||||    
T  43236308 cacttgctaaaatacttcttctaaaaaataagtgggtgtatcctagcaaatgcctataggatttgctag 43236240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 3273382 - 3273457
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||| |||||||||| ||| |||||||||| || ||| |||||| |||||| ||||||||||||||| ||||||||    
T  3273382 acttactaaaacacaccttttaaaaaataagtgggtgcattctaacaaatgcctataggagttgctaacatacacc 3273457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 6192571 - 6192496
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||| ||||||| ||||||||| |||| || |||||||||||||||||  |||||||||||||| || |||||    
T  6192571 acttgctgaaacacaccttctaaaatataagtgggtgtattctagcaaatgcatataggagttgctaacacacacc 6192496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 16960428 - 16960361
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    |||||||||||| ||  |||||||||||||| |||||||||||||||||||| ||||| || ||||||    
T  16960428 cacttgctaaaatactccttctaaaaaataagtgagtgtattctagcaaatgcctatatgatttgcta 16960361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 24770775 - 24770700
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||| ||| ||||| || |||||| |||||||||| ||||||| ||||||| ||||||||    
T  24770775 acttgctaaaacacaccttcaaaagaataagtgggtgtatcctagcaaatgcctataggggttgctaacatacacc 24770700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 32156033 - 32156108
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||   ||||||||||||| || |||||||||||||||||  || ||||||||||| ||||||||    
T  32156033 acttgctaaaacactcattctaaaaaataagtgggtgtattctagcaaatgcatacaggagttgctaacatacacc 32156108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 33676084 - 33676176
Alignment:
Q  46 aaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgttttaacaacattca 138  Q
    ||||||||| || |||||| ||| ||||||||||||||||||||||||||||||| | |||       | || ||||||||||||||||||||    
T  33676084 aaaaaataagtgggtgtatcctaacaaatgtctataggagttgctagcatacacccacttatttttttagaaggtgtgttttaacaacattca 33676176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 42199903 - 42199978
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| ||| |||||||||| ||| || ||||||||||||||||| || || ||||||||| ||||||||    
T  42199903 acttgctaaaatacaccttctaaaaattaagtgtgtgtattctagcaaatgcctgtaagagttgctaacatacacc 42199978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 42208771 - 42208846
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| ||| |||||||||| ||| || ||||||||||||||||| || || ||||||||| ||||||||    
T  42208771 acttgctaaaatacaccttctaaaaattaagtgtgtgtattctagcaaatgcctgtaagagttgctaacatacacc 42208846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 158560 - 158373
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||||||| |||||| ||||||| || ||| ||| ||||||||  ||||||||||||||| |||||| | |||||       | || ||||||    
T  158560 acttgctaaaacacaccttctagaaaataagtgggtgaattatagcaaattcctataggagttgctaacatacatccatttaatttttaagaaggtgtgt 158461  T
Q  125 tttaacaacattca---ta---tgtatttaacaac-ttttag-ttaatctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||| |||||||||   ||   ||||||||||||| |||||| || |||||| ||||||||| ||   ||||||||||||| ||||||    
T  158460 tttagcaacattcaccttaaggtgtatttaacaactttttagttttatctttgctaaaacacaccttaataaaaactagtgggtgtat 158373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 10368108 - 10368051
Alignment:
Q  141 tgtatttaacaacttttagtta-atctttactaaaacactcccgcataaaaactagtg 197  Q
    |||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||    
T  10368108 tgtatttaacaaattttagttatatctttattaaaacactcccacataaaaactagtg 10368051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 14387279 - 14387214
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||||| |||||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  14387279 tgtattcaacaactttttagttatatctttgctaaaacactcccacataaaaactagtgagtgtat 14387214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 20201739 - 20201804
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||  || |||||||||| || ||||||| |||||||||||||||||| |||||||    
T  20201739 ttgctaaaacacacattataaaaaataagtgggtgtattatagcaaatgtctataggatttgctag 20201804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 50559395 - 50559322
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||||| |||| ||||||||| || | |||| ||| |||||| ||||||||||||||| ||||||    
T  50559395 acttgctaaaacacaccttcaaaaaaataagtgggcgtatcctaacaaatgcctataggagttgctaacataca 50559322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 14387546 - 14387478
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||| |||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  14387546 cacttgccaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 14387478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 20411343 - 20411275
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||| | ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  20411343 cacttgctaagatactccttctaaaaaataagtgggtgtattctagcaaatgactataggatttgctag 20411275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 27389526 - 27389586
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| ||||||||    
T  27389526 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagga 27389586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 39424414 - 39424346
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| |  ||||||||||||||||| |||||||| |||||||    
T  39424414 cacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggatttgctag 39424346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 41146300 - 41146372
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatac 97  Q
    ||||||||||||||| |||| ||||||||| || || ||| ||||||||||||||| ||||||| || |||||    
T  41146300 acttgctaaaacacaccttcaaaaaaataagtgggtatatcctagcaaatgtctattggagttgttaacatac 41146372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 32144177 - 32144130
Alignment:
Q  44 ctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||    
T  32144177 ctaaaaaataagtgggtgtatcctagcaaatgtctataggagttgcta 32144130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 13157411 - 13157353
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| || ||| ||| ||||||||| ||||||||||||||| ||||||||    
T  13157411 ttctaaaaaataagtgggtgaattatagcaaatgcctataggagttgctaacatacacc 13157353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 1805030 - 1805095
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  ||||||||| |||| || ||||||||||||||||| |||||||| |||||||    
T  1805030 ttgctaaaatactccttctaaaagataagtgggtgtattctagcaaatgcctataggatttgctag 1805095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 32152049 - 32152004
Alignment:
Q  46 aaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||    
T  32152049 aaaaaataagtgggtgtatcctagcaaatgtctataggagttgcta 32152004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 12864331 - 12864399
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  ||| |||||||||| || ||||||||||||||||| ||||| || |||||||    
T  12864331 cacttgctaaaatactccttttaaaaaataagtgggtgtattctagcaaatgcctatatgatttgctag 12864399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 14494515 - 14494447
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| || |||||| |||||||||| |||||||| |||||||    
T  14494515 cacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctag 14494447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 36817796 - 36817728
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||  |||||||| |||||||    
T  36817796 cacttgctaaaatactcattctaaaaaataagtgtgtgtattctagcaaattcctataggatttgctag 36817728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 52772241 - 52772193
Alignment:
Q  167 ttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||||||||||||||| |||||||||||||| |||| || |||||||||    
T  52772241 ttactaaaacactcccacataaaaactagtgggtgtgttctaacaaacc 52772193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 52772392 - 52772324
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  ||||| |||||||| || ||||||||||||||||| ||||| || |||||||    
T  52772392 cacttgctaaaatactccttctgaaaaataagtgggtgtattctagcaaatgcctataagatttgctag 52772324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 16073585 - 16073510
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || ||||||  || |||||| || |||||||||||| || |||||    
T  16073585 acttgctaaaacacacattctaaaaaataagtgggtgtatcataacaaatgcctgtaggagttgctaacaaacacc 16073510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 4158250 - 4158180
Alignment:
Q  28 tgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    |||||||||||| ||| |||||||||| || |||| | ||| ||||||  |||||||||||||| ||||||    
T  4158250 tgctaaaacacaccttttaaaaaataagtgggtgtttcctaacaaatgcttataggagttgctaacataca 4158180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 23413706 - 23413760
Alignment:
Q  46 aaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||| ||  |||||||||||||||||  ||||||||||||| ||||||||    
T  23413706 aaaaaataagtggatgtattctagcaaatgttcataggagttgctaacatacacc 23413760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 47130976 - 47131022
Alignment:
Q  46 aaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| || ||||||||||||||||| |||||||| |||||||    
T  47130976 aaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 47131022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 13943408 - 13943351
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctata 81  Q
    |||||||||||| ||  |||||||||||||| || |||||||||| |||||| |||||    
T  13943408 cacttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctata 13943351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 32144135 - 32144062
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||  ||| |||||||||||||| || |||||| | ||||||||  |||| ||||||||| ||||||||    
T  32144135 ttgctaaattacaccttctaaaaaataagtgggtgtatcccagcaaatgcatataagagttgctaacatacacc 32144062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 27348270 - 27348207
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||||| || ||||||||||||||| |  |||||||||| |||||| ||||| |||||||||    
T  27348270 ttgctaaaatacttcttctaaaaaataagttggtgtattctaacaaatg-ctataagagttgcta 27348207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 32716445 - 32716513
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||| |||||| ||  ||||| |||||||| || ||||||||||||||||| ||||| || |||||||    
T  32716445 cacttactaaaatactccttcttaaaaataagtgggtgtattctagcaaatgcctataagatttgctag 32716513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 13269283 - 13269396
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||||||| |||||||||||||| |||||||| | |||       | |||||||||    
T  13269283 acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtttataggagttgctaacatacacccacttattttttaagaatgtgtgt 13269382  T
Q  125 tttaacaacattca 138  Q
    |||| |||||||||    
T  13269383 tttagcaacattca 13269396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 8258373 - 8258446
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  8258373 ttgctaaaacacttcttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 8258446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 23544841 - 23544954
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    |||| |||||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||| |||||||| | |||       | |||||||||    
T  23544841 acttactaaaacacaccttctaaaaaataagtgggtgtattctaacaaatgtctataggagttgctaacatacacccacttattttttaagaatgtgtgt 23544940  T
Q  125 tttaacaacattca 138  Q
    |||| |||||||||    
T  23544941 tttagcaacattca 23544954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 10616438 - 10616363
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  10616438 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 10616363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 25128018 - 25127943
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||||||||||| |||||||||||| ||||||||    
T  25128018 acttgctaaaacacaccttctaaaaattaagtgagagtattctagcaaatgtctgtaggagttgctaacatacacc 25127943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 32069169 - 32069094
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  32069169 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 32069094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 45299639 - 45299796
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgttt 126  Q
    ||||||||||||| |||| ||||||||| || |||||| |||||||||| ||||| |||||||||||||||||| | |||       | || ||||||||    
T  45299639 ttgctaaaacacaccttcaaaaaaataagtgggtgtatcctagcaaatgcctataagagttgctagcatacacccactta-ttttttagaaggtgtgttt 45299737  T
Q  127 taacaacattca---ta---tgtatttaacaacttttagtta-atctttactaaaacac 178  Q
    || |||||||||   ||   |||||||||||||||||||||| ||||||||||||||||    
T  45299738 tagcaacattcaccttaaagtgtatttaacaacttttagttatatctttactaaaacac 45299796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 2823651 - 2823726
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| ||  ||||| |||||||||||||||||||||||||| ||||||||    
T  2823651 acttgctaaaacacactttctaaaaaataagtggatgtatcctagcaaatgtctataggagttgctaacatacacc 2823726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 5946836 - 5946910
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||| | ||||||||||||| ||||||||    
T  5946836 acttgctaaaacacatcttctaaaaaataagtg-gtgtatcctagcaaatgccgataggagttgctaacatacacc 5946910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 13468350 - 13468425
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||| |||| |||||||||||||| || ||||||| ||||||||| ||||||||||||||| ||||||||    
T  13468350 acttgctaaagcacaccttctaaaaaataagtgggtgtattatagcaaatgcctataggagttgctaacatacacc 13468425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 27545907 - 27545832
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| ||||||||||  |||||||||||||| ||||||||    
T  27545907 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcttataggagttgctaacatacacc 27545832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 35550641 - 35550716
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| ||||||||| |||||||||| |||||||||||||||  |||||||    
T  35550641 acttgctaaaacacacattctaaaaaataagtgagtgtatcctagcaaatgcctataggagttgctaatatacacc 35550716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 36899886 - 36899811
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| ||||||||||  |||||||||||||| ||||||||    
T  36899886 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcgtataggagttgctaacatacacc 36899811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 25123525 - 25123452
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||| ||||||||| ||| |||||||||| || ||||||||||||||||||||||||| ||||||| ||||||    
T  25123525 acttgttaaaacacaccttttaaaaaataagtgggtgtattctagcaaatgtctataggcgttgctaacataca 25123452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 1783150 - 1783082
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  1783150 cacttgctaaaacactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 1783082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 26042990 - 26043065
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| || |||||| |||||||||| |||||||||||| || ||||||||    
T  26042990 acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgttaacatacacc 26043065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 32486976 - 32487051
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| |||  ||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  32486976 acttgctaaaatacactttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 32487051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 39934450 - 39934525
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| ||||||||| |||||||||||||| |  ||||||||||||||||| || |||||||||||| ||||||||    
T  39934450 acttgttaaaacacaccttctaaaaaataagttggtgtattctagcaaatgcctgtaggagttgctaacatacacc 39934525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 26630171 - 26630101
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagc-aaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||| ||||||||| || |||||| ||||| ||||||||||||||||||||| ||||||||    
T  26630171 taaaacacatcttcaaaaaaataagtgggtgtatcctagctaaatgtctataggagttgctaacatacacc 26630101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 30207312 - 30207239
Alignment:
Q  27 ttgctaaaacaca-tcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| |||| |||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  30207312 ttgctaaaacacactctt-taaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 30207239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 1201810 - 1201741
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||| ||||||||| |||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  1201810 taaaacacaccttctaaaatataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 1201741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 9413955 - 9413882
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||| | ||| |||||||||| |   |||||||||||||||||||||||||||||||| ||||||    
T  9413955 acttgctaaaacataccttttaaaaaataagtagatgtattctagcaaatgtctataggagttgctaacataca 9413882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 9483797 - 9483729
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  9483797 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 9483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 21442399 - 21442467
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  21442399 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 21442467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 3369858 - 3369784
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||| ||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  3369858 acttgctaaaacacaccttttaaaaa-taagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 3369784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 9483969 - 9484044
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||||||||||||||||| || || |||  || ||||||  |||||||||||||| ||||||||    
T  9483969 acttgctaaaacacatcttctaaaaaataagtgggtatatcttaacaaatgcttataggagttgctaacatacacc 9484044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 29125759 - 29125834
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||| ||||||||  || |||||| |||||||||| |||||||||||||||  |||||||    
T  29125759 acttgctaaaacacaccttccaaaaaataggtgggtgtatcctagcaaatgcctataggagttgctaagatacacc 29125834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 1281933 - 1281999
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||||||||||| |||||||||||||| ||  ||||||||| |||||| |||||| ||||||||    
T  1281933 acttgctaaaacacaccttctaaaaaataagtggatgtattctaccaaatgcctatagaagttgcta 1281999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 26867972 - 26868046
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||||||||||||| |||||| ||||||| || |||| || ||| ||||| ||||||||||||||| |||||||    
T  26867972 acttgctaaaacacaccttctagaaaataagtgggtgtgttatagtaaatgcctataggagttgctaacatacac 26868046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 30633114 - 30633189
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||| ||| || |||||||||||||||||  | ||| |||||||| || |||||    
T  30633114 acttgctaaaacacaccttctaaaaattaaatgggtgtattctagcaaatgcatgtagaagttgctaacaaacacc 30633189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 34103147 - 34103072
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| ||  |||||  ||||||| | |||||| |||||||| ||||||||    
T  34103147 acttgctaaaacacaccttctaaaaaataaatggatgtatcatagcaaaagcctatagaagttgctaacatacacc 34103072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 44874191 - 44874258
Alignment:
Q  33 aaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||  ||||||||||||| || |||||||||||||| ||||| ||||||||| || ||||||||    
T  44874191 aaacacactttctaaaaaataagtgggtgtattctagcaattgtctgtaggagttgttaacatacacc 44874258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 19971483 - 19971540
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| ||||||||    
T  19971483 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagga 19971540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 21021330 - 21021273
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| ||||||||    
T  21021330 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagga 21021273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 31071698 - 31071633
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| |  ||||||||||||||||| |||||||| |||||||    
T  31071698 ttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggatttgctag 31071633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 21442276 - 21442209
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  ||||||||||| || || ||||||||||||||||| |||||||| |||||||    
T  21442276 cacttgctaaaatactccttctaaaaaacaagtg-gtgtattctagcaaatgcctataggatttgctag 21442209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 35067149 - 35067073
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||| |||| ||||||||||| ||| || | ||||||||||||||  ||| ||||||||||| ||||||||    
T  35067149 acttgctaaagcacaccttctaaaaaaataagtgggcgtattctagcaaatacctaaaggagttgctaacatacacc 35067073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 184232 - 184178
Alignment:
Q  46 aaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||| || |||||| |||||||||||||||| | ||||||| ||||||||    
T  184232 aaaaaataagtgggtgtatcctagcaaatgtctatatgggttgctaacatacacc 184178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 1783175 - 1783225
Alignment:
Q  165 ctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||||||||||||||||| |||||||||||||| |||| || || ||||||    
T  1783175 ctttactaaaacactcccacataaaaactagtgggtgtgttctagcaaacc 1783225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 14826358 - 14826408
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||||| || |||||||||||||||||  ||||||| |||||||    
T  14826358 ttctaaaaaataagtgggtgtattctagcaaatgcttataggatttgctag 14826408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 42556809 - 42556759
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatg 75  Q
    |||||||||||||||  ||| ||||||||| ||||||||| ||||||||||    
T  42556809 acttgctaaaacacacattcaaaaaaataagtgagtgtatcctagcaaatg 42556759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 13290643 - 13290570
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||||| |||||||||| ||| ||  ||||||||| ||||||  | || ||||||||| ||||||    
T  13290643 acttgctaaaacacaccttctaaaaattaagtggatgtattctaacaaatgcatgtaagagttgctaacataca 13290570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 29377906 - 29377971
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||   ||||||||||||| ||||||    
T  29377906 tgtatttaacaacttttcagttatatctttactaaaacacaccttaataaaaactagtgggtgtat 29377971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 42556708 - 42556643
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    ||||||||||||||||| ||||| |||||| ||||||||| |||  ||||||||||||| ||||||    
T  42556708 tgtatttaacaactttttagttatatctttgctaaaacacaccctaataaaaactagtgggtgtat 42556643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 45299743 - 45299698
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaa 72  Q
    ||||||||||||| |||||||||||||| || |||||| |||||||    
T  45299743 ttgctaaaacacaccttctaaaaaataagtgggtgtatgctagcaa 45299698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 30207193 - 30207117
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    ||||||||||||||||| ||||| || ||||||||||||| ||   ||||||||||||| ||||||  |||||||||    
T  30207193 tgtatttaacaactttttagttatatatttactaaaacacaccttaataaaaactagtgggtgtatcctaacaaacc 30207117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 32512178 - 32512114
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||||||||   ||||||||||||| | | |||||| ||||||||| ||||| |||||||||    
T  32512178 ttgctaaaacactcattctaaaaaataaataaatgtattatagcaaatgcctataagagttgcta 32512114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 39922445 - 39922521
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    ||||||||||||||||| ||||| |||||| ||||||||| ||   ||||||||||||| ||||||  |||||||||    
T  39922445 tgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgtatcctaacaaacc 39922521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 41943004 - 41942937
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  || ||||||||||| || |||||||||||| |||| |||||||| |||||||    
T  41943004 cacttgctaaaatactcctcctaaaaaataagtgggtgtattctagc-aatgcctataggatttgctag 41942937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 6e-23; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 18352461 - 18352274
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||| | |||       | || ||||||    
T  18352461 acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacccacttattttttaagaaggtgtgt 18352362  T
Q  125 tttaacaacattcat------atgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||| ||||||||||       ||||||||||||| ||||||||| ||||| |||||||||| ||   ||||||||||||| ||||||    
T  18352361 tttagcaacattcatcttaaggtgtatttaacaactttttagttatatcttcactaaaacacaccttaataaaaactagtgggtgtat 18352274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 25818535 - 25818610
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  25818535 acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 25818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 41407393 - 41407468
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  41407393 acttgctaaaacacactttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 41407468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 28912133 - 28912319
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| | ||||||||||||| |||||||| | |||       | |||||||||    
T  28912133 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcccataggagttgctaacatacacccactta-ttttttagaatgtgtgt 28912231  T
Q  125 tttaacaacattca---ta---tgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||| |||||||||   ||   ||||||||||||| ||||||||| |||||| ||||||||| ||   ||||||||||||| ||||||    
T  28912232 tttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgtat 28912319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 2936691 - 2936767
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacca 101  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| | ||||||||||||| |||||||||    
T  2936691 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgccaataggagttgctaacatacacca 2936767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 9401798 - 9401726
Alignment:
Q  28 tgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| | |||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  9401798 tgctaaaacacaccatctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 9401726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 938946 - 939021
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  938946 acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 939021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 38796969 - 38796894
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| ||||||||| ||| ||||||||||  | ||||||||||||||||||||||||||||||||| ||||||||    
T  38796969 acttgttaaaacacaccttttaaaaaataagcgggtgtattctagcaaatgtctataggagttgctaacatacacc 38796894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 27168292 - 27168365
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| |||||||||||||| || |||||| ||| |||||| ||||||||||||||| ||||||||    
T  27168292 ttgctaaaacacaccttctaaaaaataagtgggtgtatcctaccaaatgcctataggagttgctaacatacacc 27168365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 454155 - 454268
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||| ||| |||||||||||||| || |||||| ||| |||||| ||||||||||||||| |||||||| | |||       | |||||||||    
T  454155 acttgctaaaatacaccttctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgctaacatacacccactta-ttttttagaatgtgtgt 454253  T
Q  125 tttaacaacattcat 139  Q
    |||||||||||||||    
T  454254 tttaacaacattcat 454268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 14777978 - 14778046
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  14777978 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctag 14778046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 15230116 - 15230184
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  15230116 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctag 15230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 48454691 - 48454623
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  48454691 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctag 48454623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 32852908 - 32852975
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    |||||||||||| ||  |||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  32852908 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgcta 32852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 11766172 - 11766244
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatac 97  Q
    ||||||||||||||| |||||||||||||| || |||||| ||||||||||  |||| ||||||||| |||||    
T  11766172 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcatataagagttgctaacatac 11766244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 15957359 - 15957283
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||||||||||| ||| |  |||||| ||||||||||||||||||||||| || ||||||||    
T  15957359 acttgctaaaacacaccttctaaaaaaataagttggtgtatcctagcaaatgtctataggagttgttaacatacacc 15957283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 38876314 - 38876246
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  38876314 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 38876246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 2362803 - 2362873
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||||| ||   ||||||||| || |||||| |||||||||||||||||||||||||| ||||||    
T  2362803 acttgctaaaacacacct---aaaaaataagtgggtgtatcctagcaaatgtctataggagttgctaacataca 2362873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 2509465 - 2509391
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||| ||| || |||||||||||||||||  ||||||||||| || ||||||||    
T  2509465 acttgctaaaacacaccttctaaaaa-taagtgggtgtattctagcaaatgcatataggagttgttaacatacacc 2509391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 19069447 - 19069518
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcata 96  Q
    |||||||||||||||  ||||||||||||| || |||||| |||||||||  ||||||||||||||| ||||    
T  19069447 acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatagctataggagttgctaacata 19069518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 24720315 - 24720394
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattta 106  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| ||||||| | ||||| |||||    
T  24720315 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccattta 24720394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 38368001 - 38367938
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttg 88  Q
    ||||||||||||||| ||| |||||||||| ||  |||||||||||||||| ||||||||||||    
T  38368001 acttgctaaaacacaccttttaaaaaataagtggctgtattctagcaaatgcctataggagttg 38367938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 45225312 - 45225379
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  45225312 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 45225379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 6736650 - 6736580
Alignment:
Q  31 taaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||| ||||||||||| ||| |  ||||||||||||||||| ||||||||||||||| ||||||||    
T  6736650 taaaacacaccttctaaaaaaataagtaggtgtattctagcaaatgcctataggagttgctaacatacacc 6736580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 41037409 - 41037475
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    |||||||||||||||  |||| ||| ||||||| ||||||| ||||||||| |||||||||||||||    
T  41037409 acttgctaaaacacacattcttaaatataactgggtgtattttagcaaatgcctataggagttgcta 41037475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 2634035 - 2633963
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||   ||||||||| |  ||||||||||||||||| ||||||||||||||| ||||||||    
T  2634035 acttgctaaaacacacct---aaaaaataagtaggtgtattctagcaaatgcctataggagttgctaacatacacc 2633963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 20516974 - 20517039
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  20516974 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 20517039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 8048112 - 8048048
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||||| ||  |||||||||||||| || |||||||||||||||||||| ||||| ||||||    
T  8048112 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctgtaggatttgcta 8048048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 12080750 - 12080818
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  12080750 cacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 12080818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 37139082 - 37139022
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    |||||||||||| ||  |||||||||||||| || ||||||| ||||||||||||||||||    
T  37139082 cacttgctaaaatactccttctaaaaaataagtgggtgtattttagcaaatgtctatagga 37139022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 14770126 - 14770193
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||| |||| ||  |||||||||||||| || ||||||||||||||||| |||||||| ||||||    
T  14770126 cacttgcgaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgcta 14770193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 15220577 - 15220644
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    ||||||| |||| ||  |||||||||||||| || ||||||||||||||||| |||||||| ||||||    
T  15220577 cacttgcgaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgcta 15220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 23740089 - 23740164
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||| ||||||||| ||||||||||| ||| |  |||||||||| |||||| ||||||||||||||| |||||||    
T  23740089 acttgttaaaacacaccttctaaaaaaataagtaggtgtattctaacaaatgcctataggagttgctaacatacac 23740164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 45225445 - 45225512
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||| | |||||||    
T  45225445 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctag 45225512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 22479260 - 22479317
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    ||||||||| ||  |||||||||||||| || |||||||||||||||||| |||||||    
T  22479260 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtatatagga 22479317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 7437945 - 7437885
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| ||||||||    
T  7437945 cacttgctaaaatactcattctaaaaaataattgggtgtattctagcaaatgcctatagga 7437885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 11327647 - 11327715
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| || |||||| |||||||||| |||||||| |||||||    
T  11327647 cacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctag 11327715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 14719140 - 14719072
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||| ||||| ||  |||||||||||||| || |||||||| |||||||| |||||||| |||||||    
T  14719140 cacttgttaaaatactccttctaaaaaataagtgggtgtattccagcaaatgcctataggatttgctag 14719072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 27811993 - 27812061
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||| ||||| ||  |||||||||||||| || ||||||||||||||||| ||| |||| |||||||    
T  27811993 cacttgttaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctacaggatttgctag 27812061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 34986576 - 34986644
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||||||||||||||||| ||||| || |||||||    
T  34986576 cacttgctaaaatactctttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctag 34986644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 48454540 - 48454492
Alignment:
Q  167 ttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||||||||||||||| |||||||||||||| |||| || |||||||||    
T  48454540 ttactaaaacactcccacataaaaactagtgggtgtgttctaacaaacc 48454492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 28605493 - 28605560
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||  |||||| | ||||||    
T  28605493 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatacctatagaatttgcta 28605560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 48193221 - 48193272
Alignment:
Q  41 cttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||| || |||||||||| |||||| |||||||| |||||||    
T  48193221 cttctaaaaaataagtgggtgtattctaacaaatgcctataggatttgctag 48193272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 27597089 - 27597131
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    ||||||||||||| ||  |||||||||||||||||||||||||    
T  27597089 ttctaaaaaataagtggatgtattctagcaaatgtctatagga 27597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 4655096 - 4655164
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| || ||||||| |||||||||  ||||||| |||||||    
T  4655096 cacttgctaaaatactccttctaaaaactaagtgggtgtattttagcaaatgcttataggatttgctag 4655164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 17421729 - 17421804
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||    
T  17421729 acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtctataggagtttctaacatacacc 17421804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 31752151 - 31752226
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  31752151 acttgctaaaacacaccttctaaaaaataaatgggtgtattctagcaaatgcctataggagttgctaacatacacc 31752226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 6261138 - 6261063
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || || ||| |||||||||||||||||||||||||| ||||||||    
T  6261138 acttgctaaaacacaccttctaaaaaataagtgggtatatcctagcaaatgtctataggagttgctaacatacacc 6261063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 25912189 - 25912114
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  25912189 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 25912114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 28747797 - 28747872
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  28747797 acttgctaaaacacacattctaaaaattaagtgggtgtattctagcaaatgtctataggagttgctaacatacacc 28747872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 2528802 - 2528916
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtg 123  Q
    ||||||||||||||| ||||||||||| ||| ||  |||||||||||||||||||||||||||||||| |||||||| | |||       | ||||||||    
T  2528802 acttgctaaaacacaccttctaaaaaaataagtggatgtattctagcaaatgtctataggagttgctaacatacacccacttattttttaagaatgtgtg 2528901  T
Q  124 ttttaacaacattca 138  Q
    ||||| |||||||||    
T  2528902 ttttagcaacattca 2528916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 17233413 - 17233345
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||| |||||||    
T  17233413 taaaacacaacttctaaaaaataagtgagtgtgttctagcaaatgcctataggagttgctaacatacac 17233345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 33696091 - 33696163
Alignment:
Q  28 tgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||| | |||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||    
T  33696091 tgctaaaacataacttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 33696163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 39548987 - 39548911
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacca 101  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| |||||| |||||||| |||||||||    
T  39548987 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatggctatagaagttgctaacatacacca 39548911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 7944323 - 7944398
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  7944323 acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 7944398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 14369802 - 14369877
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  14369802 acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 14369877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 17233061 - 17232990
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||    
T  17233061 ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacataca 17232990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 31240391 - 31240316
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||| ||||||||| ||||||||    
T  31240391 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataagagttgctaacatacacc 31240316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 22800782 - 22800713
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||| ||| |||||||||| || |||||||||||||||||||| |||||||||||| ||||||||    
T  22800782 taaaacacaccttttaaaaaataagtgggtgtattctagcaaatgtctgtaggagttgctaacatacacc 22800713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 3038922 - 3038997
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || |||||| ||| |||||| ||||||||||||||| ||||||||    
T  3038922 acttgctaaaacacacattctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgctaacatacacc 3038997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 4083773 - 4083848
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||| ||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| | ||||||    
T  4083773 acttgttaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacgtacacc 4083848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 12910166 - 12910095
Alignment:
Q  28 tgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    |||||||||| |  ||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||    
T  12910166 tgctaaaacatacattctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacac 12910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 6436458 - 6436531
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||||||||||| |||||||||||||| |  ||| || |||||||||| ||||||||||||||| ||||||    
T  6436458 acttgctaaaacacaccttctaaaaaataagtaggtgaatcctagcaaatgcctataggagttgctaacataca 6436531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 30688063 - 30687995
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  30688063 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 30687995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 4737967 - 4738042
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || |||||| |||||||||| | ||| ||||||||| ||||||||    
T  4737967 acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcccatatgagttgctaacatacacc 4738042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 10951090 - 10951165
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| ||| |||||||||| |  ||||||| || |||||| ||||||||||||||| ||||||||    
T  10951090 acttgctaaaacacaccttataaaaaataagtaggtgtattatatcaaatgcctataggagttgctaacatacacc 10951165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 8410765 - 8410691
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    |||||||||||||||  ||||||||||||| |   ||||| ||||||||||| ||||||||||||||| ||||||    
T  8410765 acttgctaaaacacacattctaaaaaataagttgatgtatcctagcaaatgtttataggagttgctaggatacac 8410691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 15809012 - 15809077
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  15809012 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 15809077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 2695242 - 2695168
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||||||||  ||| || || ||| |||||||||| ||||||||||||||| ||||||||    
T  2695242 acttgctaaaacacaccttctaaaatgtaagtgggt-tatcctagcaaatgcctataggagttgctaacatacacc 2695168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 13711158 - 13711104
Alignment:
Q  46 aaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||| || || ||||||||||||||||| ||||||||||||||| ||||||||    
T  13711158 aaaaaaaaagtgggtgtattctagcaaatgcctataggagttgctaacatacacc 13711104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 9124737 - 9124851
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtg 123  Q
    |||||||||||||||  |||||||||| ||| ||  |||||||||||||||| |||||| ||||| || |||||||| | |||       | ||||||||    
T  9124737 acttgctaaaacacacattctaaaaaaataagtggatgtattctagcaaatgcctatagaagttgttaacatacacccacttattttttaagaatgtgtg 9124836  T
Q  124 ttttaacaacattca 138  Q
    ||||| |||||||||    
T  9124837 ttttagcaacattca 9124851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 27005225 - 27005160
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || |||||||||| |||||||||| |||| |||||||    
T  27005225 ttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgtctaaaggatttgctag 27005160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 39038560 - 39038625
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcata 96  Q
    ||||||||| |||||||||||||| || || ||| ||||||||||  |||||||||||||| ||||    
T  39038560 taaaacacaccttctaaaaaataagtgggtatatcctagcaaatgcatataggagttgctaacata 39038625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 1951428 - 1951380
Alignment:
Q  170 ctaaaacactcccgcataaaaactagtgagtgtattttaacaaacctca 218  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| ||||    
T  1951428 ctaaaacactcccacataaaaactagtgggtgtattttagcaaatctca 1951380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 29302253 - 29302185
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||| ||||| ||  ||||||||||||||  | ||||||||||||||||| |||||||| |||||||    
T  29302253 cacttgttaaaatactccttctaaaaaataagcgggtgtattctagcaaatgcctataggatttgctag 29302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 37282237 - 37282285
Alignment:
Q  44 ctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||| |||||||||| ||||||||| |||||||| |||||||    
T  37282237 ctaaaaaataagtgagtgtattttagcaaatgcctataggatttgctag 37282285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 17605096 - 17605147
Alignment:
Q  41 cttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||| || |||||||| |||||||| |||||||| |||||||    
T  17605096 cttctaaaaaataagtgggtgtattccagcaaatgcctataggatttgctag 17605147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 22701890 - 22701816
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| |||| ||||| ||| || |||||||||||||||||  |||| ||||||||| | ||||||    
T  22701890 acttgctaaaacacaccttccaaaaa-taagtgggtgtattctagcaaatgcttataagagttgctaacgtacacc 22701816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 33026269 - 33026332
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgct 90  Q
    ||||||||| ||  |||||||||||||| |  ||||||||||||||||| |||||||| |||||    
T  33026269 ttgctaaaatactccttctaaaaaataagtcggtgtattctagcaaatgcctataggatttgct 33026332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 33832751 - 33832826
Alignment:
Q  25 acttgctaaaacacatcttctaaaa-aataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||||||||||||| |||| |||| ||||| || |||  ||||| |||||| ||||||||||||||| |||||||    
T  33832751 acttgctaaaacacaccttccaaaacaataagtgggtgcgttctaacaaatgcctataggagttgctaacatacac 33832826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 37249361 - 37249408
Alignment:
Q  45 taaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||| || ||||||||||||||||| |||||||| |||||||    
T  37249361 taaaaaataaatgggtgtattctagcaaatgcctataggatttgctag 37249408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 14795691 - 14795641
Alignment:
Q  165 ctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||| ||||||||||||| ||||||||||||||||||| || || ||||||    
T  14795691 ctttgctaaaacactcccacataaaaactagtgagtgtgttctagcaaacc 14795641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 17210004 - 17209958
Alignment:
Q  44 ctaaaaaataactgagtgtattctagcaaatgtctataggagttgct 90  Q
    ||||||||||| || ||||||||||||||||| |||||||| |||||    
T  17210004 ctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 17209958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 40234216 - 40234162
Alignment:
Q  44 ctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    |||||| |||| || |||||| |||||||||| ||||||||||||||| ||||||    
T  40234216 ctaaaacataagtgggtgtatcctagcaaatgcctataggagttgctaacataca 40234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 3960783 - 3960718
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || |||||||||||||||||  | ||||| |||||||    
T  3960783 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcatgtaggatttgctag 3960718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 12910212 - 12910257
Alignment:
Q  170 ctaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    ||||||||||||| |||||||||||||| |||| || |||||||||    
T  12910212 ctaaaacactcccacataaaaactagtgggtgtgttctaacaaacc 12910257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 30667621 - 30667693
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagg-agttgctagcatacac 99  Q
    |||||| |||||| ||||||||||| || ||||||| ||||||||||| |||||||| | ||||||| ||||||    
T  30667621 ttgctataacacaccttctaaaaaaaaagtgagtgtgttctagcaaat-tctataggcatttgctagaatacac 30667693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 32736416 - 32736481
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    ||||||||||||||||| ||||| |||||| ||||||||| ||   ||||||||||||||||||||    
T  32736416 tgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgagtgtat 32736481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 1921498 - 1921566
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| || |||| |||||| ||| || |||||| | |||||||| |||||||| |||||||    
T  1921498 cacttgctaaaatacttcttttaaaaactaagtgggtgtatccgagcaaatgcctataggatttgctag 1921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 1951581 - 1951513
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  ||| |||||||||| || |||||||||| || ||| |||||||| |||||||    
T  1951581 cacttgctaaaatactccttttaaaaaataagtgggtgtattctaacatatgcctataggatttgctag 1951513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 11448771 - 11448839
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| ||  ||||| |||||||||| |||||||| |||||||    
T  11448771 cacttgctaaaatactccttctaaaaactaagtggatgtatcctagcaaatgcctataggatttgctag 11448839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 33282294 - 33282362
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || ||| ||||||||||||| |||| ||| |||||||    
T  33282294 cacttgctaaaatactcattctaaaaaataagtgggtgcattctagcaaatgcctattggatttgctag 33282362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 33730568 - 33730640
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatac 97  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||    
T  33730568 acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatac 33730640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 216
Target Start/End: Complemental strand, 4898274 - 4898075
Alignment:
Q  25 acttgctaaaacacatcttc-taaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtg 123  Q
    ||||||||||||||| |||  |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||       | ||||||||    
T  4898274 acttgctaaaacacaccttaataaaaaataagtgagtgtattctagcaaatgcctataggagttgctaacatacaccaactta-ttttttagaatgtgtg 4898176  T
Q  124 ttttaacaacattcat------atgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    ||||| ||||||||||      |||||||  ||||| ||||||||| |||| | ||||||||| ||   ||||||||||||| ||||||  |||||||||    
T  4898175 ttttagcaacattcatcttaagatgtattggacaactttttagttatatctatcctaaaacacaccttaataaaaactagtgggtgtatcctaacaaacc 4898076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 14488345 - 14488419
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacac 99  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||||||| |||||||    
T  14488345 acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctatatgagttgctaacatacac 14488419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 30525498 - 30525425
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| |  ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  30525498 ttgctaaaacatactttctaaaaaataagtgagtgtattctagcaaatgcctataggagttgctaacatacacc 30525425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 4898592 - 4898517
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  4898592 acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 4898517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 18102735 - 18102922
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||||||||| |||  ||||||||||||| || ||||||  ||||||||| |||||| |||||||  |||||||||| |||       |||| ||||||    
T  18102735 acttgctaaaatacacattctaaaaaataagtgggtgtatcatagcaaatgcctatagaagttgctgacatacaccaacttatttttttaaaaggtgtgt 18102834  T
Q  125 tttaacaacattcata------tgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||||||||||||| |      ||||||||||||| ||||||||| |||||| ||||||||| ||   |||||||||||||| |||||    
T  18102835 tttaacaacattcacattaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgaatgtat 18102922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 18154591 - 18154666
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||||| | |||| ||||||| || |||||| ||| |||||||||||||||||||||| ||||||||    
T  18154591 acttgctaaaacacaccgtctataaaataagtgggtgtatcctaacaaatgtctataggagttgctaacatacacc 18154666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 218
Target Start/End: Original strand, 25061701 - 25061900
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgt 124  Q
    ||||| ||||||||| ||||||| |||||| |  |||||| |||||||||| ||||||||||||||| |||||||| | |||       | || ||||||    
T  25061701 acttgttaaaacacaccttctaacaaataagttggtgtatcctagcaaatgcctataggagttgctaacatacacccactta-ttttttagaaggtgtgt 25061799  T
Q  125 tttaacaacattca--ta---tgtatttaacaac-ttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacctc 217  Q
    |||| |||||||||  ||   ||||||||||||| ||||||||| |||||| ||||||||| ||   ||||||||||||| ||||||  || ||||||||    
T  25061800 tttagcaacattcacttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgcgtgtatcctagcaaacctc 25061899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 20755504 - 20755436
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||| |||||||||| |||||||    
T  20755504 cacttgctaaaatactccttctaaaaaataagtgcgtgtattctagcaaacgtctataggatttgctag 20755436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 29646265 - 29646333
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  29646265 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 29646333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 31133025 - 31132957
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  31133025 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 31132957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 204
Target Start/End: Original strand, 15718261 - 15718442
Alignment:
Q  31 taaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaatttannnnnnnaaaatgtgtgttttaac 130  Q
    ||||||||| ||||||||| |||| ||  ||||||||| |||||| ||||||||||||||| | |||||| | |||       | || |||||||||| |    
T  15718261 taaaacacaccttctaaaatataagtggatgtattctaacaaatgcctataggagttgctaacttacacccacttaattttttagaaagtgtgttttagc 15718360  T
Q  131 aacattc------atatgtatttaac-aacttttagtta-atctttactaaaacactcccgcataaaaactagtgagtgtat 204  Q
    |||||||      | ||||||||||| || |||| |||| |||||| ||| ||||||||| |||||||||||||| ||||||    
T  15718361 aacattcaccttaaaatgtatttaacaaatttttcgttatatctttgctacaacactcccacataaaaactagtgggtgtat 15718442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 1370047 - 1369987
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    |||||||||||| ||  |||||||||||||| ||  |||||||||||||||||||||||||    
T  1370047 cacttgctaaaatactccttctaaaaaataaatggatgtattctagcaaatgtctatagga 1369987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 4184408 - 4184340
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||||||| |  ||||||||||||||||| |||||||| |||||||    
T  4184408 cacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggatttgctag 4184340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 11742372 - 11742444
Alignment:
Q  28 tgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| |||  ||||| ||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  11742372 tgctaaaacacacctttaaaaaattaaatgggtgtatcctagcaaatgcctataggagttgctaacatacacc 11742444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 26211423 - 26211344
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaattta 106  Q
    ||||||||| || ||||||||||||||| |  ||||||||||||||||| ||| | || |||||| |||||||| |||||    
T  26211423 ttgctaaaatacttcttctaaaaaataagtaggtgtattctagcaaatgcctacaagaattgctaacatacacccattta 26211344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 9955926 - 9955876
Alignment:
Q  42 ttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  9955926 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctag 9955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 8171928 - 8171993
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| ||||| || |||||||    
T  8171928 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctag 8171993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 11100529 - 11100461
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||  |||||||||| ||| || |||||| |||||||||| |||||||| |||||||    
T  11100529 cacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctag 11100461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 16599218 - 16599158
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    |||||||||||| ||  |||||||||||||| || ||||||||||| ||||| ||||||||    
T  16599218 cacttgctaaaatactccttctaaaaaataagtgggtgtattctagtaaatgcctatagga 16599158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 27828460 - 27828392
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||| ||   ||||||||||||| || |||||||||| |||||| |||||||| |||||||    
T  27828460 cacttgctaaaatactcattctaaaaaataagtgggtgtattctaacaaatgcctataggatttgctag 27828392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 3438139 - 3438064
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || || ||| || ||||||| ||||| |||||| || ||||||||    
T  3438139 acttgctaaaacacacattctaaaaaataagtgggtatatccttgcaaatgcctataagagttggtaacatacacc 3438064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 11100103 - 11100170
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaa-taactgagtgtattctagcaaatgtctataggagttgcta 91  Q
    |||||||||||||||  |||||||||| ||| || ||| |||||||||||||  ||||||||||||||    
T  11100103 acttgctaaaacacacattctaaaaaaataagtgggtgcattctagcaaatgcatataggagttgcta 11100170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 15962888 - 15962818
Alignment:
Q  22 tacacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    |||||||||||||| ||   ||||||||||||| || ||||||||||| ||||| |||||| | |||||||    
T  15962888 tacacttgctaaaatactcattctaaaaaataagtgggtgtattctagaaaatgcctatagaatttgctag 15962818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 26668016 - 26667946
Alignment:
Q  22 tacacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||| |||||| ||  |||||||||||||| || |||||||||| |||||| |||||| | |||||||    
T  26668016 tacacttactaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatagaatttgctag 26667946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 10778092 - 10778032
Alignment:
Q  24 cacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctatagga 84  Q
    |||||||||||| ||  ||||||||||  || || |||||| |||||||||||||||||||    
T  10778092 cacttgctaaaatactccttctaaaaaccaagtgggtgtatcctagcaaatgtctatagga 10778032  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 16599263 - 16599307
Alignment:
Q  171 taaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    |||||||||||| ||||||||||||||||||| || || ||||||    
T  16599263 taaaacactcccacataaaaactagtgagtgtgttctagcaaacc 16599307  T

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Target: scaffold0418 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 5733 - 5808
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||    
T  5733 acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgtctataggagttgctaacttacacc 5808  T

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Target: scaffold0015 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 9879 - 9807
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatac 97  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||    
T  9879 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatac 9807  T

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Target: scaffold0217 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 20766 - 20691
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||||| | |||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||    
T  20766 acttgctaaaacataccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacacc 20691  T

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Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 57947 - 58022
Alignment:
Q  27 ttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacaccaa 102  Q
    ||||||||| ||  |||||||||||||| || ||||||||||||||||| |||||||| ||||||| | |||||||    
T  57947 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaaaacaccaa 58022  T

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Target: scaffold1808 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 615 - 689
Alignment:
Q  26 cttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    |||||||||||| | ||||| |||||||| || |||||| |||| ||||| ||||||||||||||| ||||||||    
T  615 cttgctaaaacataccttctgaaaaataagtgggtgtatcctagaaaatgcctataggagttgctaacatacacc 689  T

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Target: scaffold0627 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 4110 - 4182
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcataca 98  Q
    ||||||| ||||||| |||||||||||||| || ||||||| |||||||||  |||||||||||||| ||||||    
T  4110 acttgctcaaacacaccttctaaaaaataagtgggtgtatt-tagcaaatgcttataggagttgctaacataca 4182  T

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Target: scaffold0325 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 6589 - 6664
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctagcatacacc 100  Q
    ||||||||||| ||| |||||||||||||| |   ||||| |||||||||| ||||||||||||||| || |||||    
T  6589 acttgctaaaatacaccttctaaaaaataaatagatgtatcctagcaaatgcctataggagttgctaacacacacc 6664  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 452513 - 452446
Alignment:
Q  25 acttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||||||| ||  |||||||||||||| || |||||||||| |||||| ||||| || |||||||    
T  452513 acttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatacgatttgctag 452446  T

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Target: scaffold0119 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 2777 - 2847
Alignment:
Q  22 tacacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||| |||||| ||  |||||||||||||| || |||||||||| |||||| |||||| | |||||||    
T  2777 tacacttactaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatagaatttgctag 2847  T

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Target: scaffold0119; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 14832 - 14902
Alignment:
Q  22 tacacttgctaaaacacatcttctaaaaaataactgagtgtattctagcaaatgtctataggagttgctag 92  Q
    ||||||| |||||| ||  |||||||||||||| || |||||||||| |||||| |||||| | |||||||    
T  14832 tacacttactaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatagaatttgctag 14902  T

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Target: scaffold1717 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1717
Description:

Target: scaffold1717; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 1405 - 1329
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    ||||||||||||||||| ||||| |||||  ||||||||| ||   |||||||||||||||||||| ||| ||||||    
T  1405 tgtatttaacaactttttagttatatcttcgctaaaacacaccttaataaaaactagtgagtgtatcttagcaaacc 1329  T

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Target: scaffold1527 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1527
Description:

Target: scaffold1527; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 1651 - 1575
Alignment:
Q  141 tgtatttaacaactttt-agtta-atctttactaaaacactcccgcataaaaactagtgagtgtattttaacaaacc 215  Q
    ||||||||||||||||| ||||| |||||  ||||||||| ||   |||||||||||||||||||| ||| ||||||    
T  1651 tgtatttaacaactttttagttatatcttcgctaaaacacaccttaataaaaactagtgagtgtatcttagcaaacc 1575  T

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