View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5448_high_10 (Length: 369)

Name: NF5448_high_10
Description: NF5448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5448_high_10
NF5448_high_10
[»] chr5 (11 HSPs)
chr5 (34-364)||(7633590-7633922)
chr5 (1-43)||(7732848-7732890)
chr5 (1-44)||(25994943-25994986)
chr5 (1-44)||(25868119-25868162)
chr5 (1-44)||(25868504-25868547)
chr5 (1-44)||(25994557-25994600)
chr5 (1-51)||(6408653-6408702)
chr5 (4-42)||(7633528-7633566)
chr5 (4-50)||(14410252-14410298)
chr5 (5-42)||(15106398-15106435)
chr5 (8-48)||(7826053-7826093)
[»] chr1 (7 HSPs)
chr1 (74-364)||(42146688-42146984)
chr1 (1-44)||(37920147-37920190)
chr1 (1-44)||(52690198-52690241)
chr1 (1-43)||(37919721-37919763)
chr1 (2-46)||(32713215-32713259)
chr1 (1-41)||(45886982-45887022)
chr1 (9-41)||(46190843-46190875)
[»] chr6 (4 HSPs)
chr6 (30-260)||(1860450-1860696)
chr6 (1-44)||(1860389-1860432)
chr6 (1-45)||(31778840-31778884)
chr6 (1-45)||(32879703-32879747)
[»] chr4 (3 HSPs)
chr4 (1-49)||(40361672-40361720)
chr4 (10-49)||(38677587-38677626)
chr4 (1-41)||(26251491-26251531)
[»] chr2 (8 HSPs)
chr2 (1-44)||(19004819-19004862)
chr2 (7-44)||(37940145-37940182)
chr2 (1-45)||(33710905-33710949)
chr2 (1-44)||(42807478-42807521)
chr2 (1-44)||(42808588-42808631)
chr2 (1-51)||(44158309-44158359)
chr2 (15-43)||(14913435-14913463)
chr2 (1-41)||(19004907-19004947)
[»] chr8 (11 HSPs)
chr8 (12-44)||(36701347-36701379)
chr8 (1-45)||(45156028-45156072)
chr8 (5-44)||(7130616-7130655)
chr8 (1-44)||(13461201-13461244)
chr8 (1-44)||(42432043-42432086)
chr8 (4-45)||(7130146-7130187)
chr8 (1-42)||(39872184-39872225)
chr8 (5-46)||(41720967-41721008)
chr8 (8-44)||(33220700-33220736)
chr8 (1-41)||(42431685-42431725)
chr8 (1-45)||(45156368-45156412)
[»] chr7 (1 HSPs)
chr7 (1-44)||(42629201-42629244)
[»] scaffold1107 (1 HSPs)
scaffold1107 (1-50)||(1915-1964)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-46)||(186959-187004)


Alignment Details
Target: chr5 (Bit Score: 294; Significance: 1e-165; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 34 - 364
Target Start/End: Original strand, 7633590 - 7633922
Alignment:
Q  34 ttaactcacgctagtttacatatcatatggttttctgttctcttacatagaggatcatcatgaactca--gagaatggtgcatttagcgctggctctggc 131  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||||||||||||  |||||||||||    
T  7633590 ttaactcacgctagtttacatatcatatggttttctgttatcttacatagaagatcatcaggaactcaaagagaatggtgcatttagtactggctctggc 7633689  T
Q  132 aaccacaattgatcacgactcaacacatggacccaattcatgctcattagatgcctacatatctaactatgctacaataaaagacaagaaaatctcaaga 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7633690 aaccacaattgatcacgactcaacacatggacccaattcatgctcattagatgcctacatatccaactatgctacaataaaagacaagaaaatctcaaga 7633789  T
Q  232 attttaaacatgaatacgacccattagattttttatgctatgaaaagtcaatttgttgttccattcataaacaataagaatcattattattatttttggg 331  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7633790 attttaaacatgaatacgacccattagatttttcatgctatgaaaagtcaatttgttgttccattcataaacaataagaatcattattattatttttggg 7633889  T
Q  332 atactttattaccactcgttatttcatctcact 364  Q
    |||||||||||||||||||||||||||||||||    
T  7633890 atactttattaccactcgttatttcatctcact 7633922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7732890 - 7732848
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacg 43  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  7732890 tacacatgcgtgacttaagtcacgccacatgagttaactcacg 7732848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25994986 - 25994943
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  25994986 tacacatgcgtgacttaagtcacgctgcatgagttaactcacgc 25994943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25868119 - 25868162
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||| ||||||||||||||||  |||||||||||||||||    
T  25868119 tacacatgtgtgacttaagtcacgctgcatgagttaactcacgc 25868162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25868547 - 25868504
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||||||  ||| |||||||||||||    
T  25868547 tacacatgcgtgacttaagtcacgctgcataagttaactcacgc 25868504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25994557 - 25994600
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||||||  | |||||||||||||||    
T  25994557 tacacatgcgtgacttaagtcacgccgcctgagttaactcacgc 25994600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6408653 - 6408702
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgctagttta 51  Q
    |||||||||||||||||||||||||  ||| |||||||||| |||||||||    
T  6408653 tacacatgcgtgacttaagtcacgctgcat-agttaactcaagctagttta 6408702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 7633528 - 7633566
Alignment:
Q  4 acatgcgtgacttaagtcacgcaacatgagttaactcac 42  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  7633528 acatacgtgacttaagtcacgcagcatgagttaactcac 7633566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 14410252 - 14410298
Alignment:
Q  4 acatgcgtgacttaagtcacgcaacatgagttaactcacgctagttt 50  Q
    ||||||||||||||||||||||  | ||||||||||||||| |||||    
T  14410252 acatgcgtgacttaagtcacgctgcgtgagttaactcacgcaagttt 14410298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 15106435 - 15106398
Alignment:
Q  5 catgcgtgacttaagtcacgcaacatgagttaactcac 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  15106435 catgcgtgacttaagtcacggagcatgagttaactcac 15106398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 7826053 - 7826093
Alignment:
Q  8 gcgtgacttaagtcacgcaacatgagttaactcacgctagt 48  Q
    |||||| |||| || ||||||||||||||||||||||||||    
T  7826053 gcgtgagttaactcccgcaacatgagttaactcacgctagt 7826093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 9e-89; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 74 - 364
Target Start/End: Complemental strand, 42146984 - 42146688
Alignment:
Q  74 tcttacatagaggatcatcatgaactca--gagaatggtg-catttagcgctggctctggcaaccacaattgatcacgactcaacacatggacccaattc 170  Q
    ||||||||||| |||||||| |||||||  |||||||||| ||||||    |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  42146984 tcttacatagaagatcatcaggaactcaaagagaatggtggcatttaatattggctctggcaaacacaattgagcatgactcaacacatggacccaattc 42146885  T
Q  171 atgctcattagatgcctacatatctaactatgctacaataaaagacaa-gaaaatctcaagaattttaaacatgaatacgacccattagattt-tttatg 268  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||| |||||     
T  42146884 atgctcattagatgcctacatagctaacaatgctacaataaaagacaacaaaaatctcaagaattttaaacatgaatacgaccctttagatttatttata 42146785  T
Q  269 ctatgaaaagtcaatttgttgttccattcataaacaataagaatcatta-ttattatttttgggatactttattaccactcgttatttcatctcact 364  Q
    || ||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||| |||| |||||||| ||||||||| |||||    
T  42146784 ctgtgaaaagtcaatttgctgttccattcataaataataaaaatcattatttattatttttgggatattttactaccactcattatttcatatcact 42146688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37920190 - 37920147
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  37920190 tacacatgcgtgacttaaatcacgcaacgtgagttaactcacgc 37920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52690241 - 52690198
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||| |||||||||||||||  ||||||||||||||||||    
T  52690241 tacacatgtgtgacttaagtcacgtcacatgagttaactcacgc 52690198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37919721 - 37919763
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacg 43  Q
    |||||||||||||||||||||| |||||||| ||||| |||||    
T  37919721 tacacatgcgtgacttaagtcatgcaacatgggttaattcacg 37919763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 32713215 - 32713259
Alignment:
Q  2 acacatgcgtgacttaagtcacgcaacatgagttaactcacgcta 46  Q
    |||||| |||||||||||||||||  | |||||||||||||||||    
T  32713215 acacatacgtgacttaagtcacgctgcgtgagttaactcacgcta 32713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45886982 - 45887022
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactca 41  Q
    |||| |||||||||||||||||||| |||| ||||||||||    
T  45886982 tacatatgcgtgacttaagtcacgcgacataagttaactca 45887022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 46190875 - 46190843
Alignment:
Q  9 cgtgacttaagtcacgcaacatgagttaactca 41  Q
    ||||||||||||||| |||||||||||||||||    
T  46190875 cgtgacttaagtcacacaacatgagttaactca 46190843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 260
Target Start/End: Original strand, 1860450 - 1860696
Alignment:
Q  30 tgagttaactcacgctagtttacatatcatatggttttctgttc-------------tcttacatagaggatcatcatgaactca--gagaatggtg-ca 113  Q
    ||||||||||||||||||||||||||||||||   |||||||||             |||||| |||| |||||||| |||||||  |||||||||| ||    
T  1860450 tgagttaactcacgctagtttacatatcatataactttctgttcgttacagacagagtcttacgtagaagatcatcaggaactcaaagagaatggtggca 1860549  T
Q  114 tttagcgctggctctggcaaccacaattgatcacgactcaacacatggacccaattcatgctcattagatgcctacatatctaactatgctacaataaaa 213  Q
    ||||    |||| |||||||||||| | |||| |||||||||   |||||||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  1860550 tttaatattggcactggcaaccacagtcgatcgcgactcaaccattggacccaattcatgctcattagatgcctacatagctaacaatcctacaataaaa 1860649  T
Q  214 gacaagaaaatctcaagaattttaaacatgaatacgacccattagat 260  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  1860650 gacaacaaaatctcaagaattttaaacatgaatacgactcattagat 1860696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1860389 - 1860432
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  1860389 tacacatgcgtgacttaagtcacgcaacataagttaactcacgc 1860432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31778840 - 31778884
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgct 45  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  31778840 tacacatgcgtgacttaagtcacgccgcatgagttaactcacgct 31778884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32879703 - 32879747
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgct 45  Q
    ||||| |||||||||||||||||||  | ||||||||||||||||    
T  32879703 tacacttgcgtgacttaagtcacgctgcgtgagttaactcacgct 32879747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40361720 - 40361672
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgctagtt 49  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  40361720 tacacatgcgtgacttaagtcacgccacgtgagttaactcacgctagtt 40361672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 38677626 - 38677587
Alignment:
Q  10 gtgacttaagtcacgcaacatgagttaactcacgctagtt 49  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  38677626 gtgacttaagtcacgcaacgtgagttaactcacgttagtt 38677587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26251491 - 26251531
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactca 41  Q
    |||||||||||||||||||||||||   |||||||||||||    
T  26251491 tacacatgcgtgacttaagtcacgccgtatgagttaactca 26251531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19004819 - 19004862
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  19004819 tacacatgcgtgacttaagtcacgccgcatgagttaactcacgc 19004862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 37940182 - 37940145
Alignment:
Q  7 tgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  37940182 tgcgtgacttaagtcacgctacatgagttaactcacgc 37940145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33710905 - 33710949
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgct 45  Q
    |||||||||||||||||||||||||  | ||||||||||||||||    
T  33710905 tacacatgcgtgacttaagtcacgctgcgtgagttaactcacgct 33710949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42807478 - 42807521
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    ||||||| |||||||||||||||||  |||||||||||||||||    
T  42807478 tacacatacgtgacttaagtcacgccgcatgagttaactcacgc 42807521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42808631 - 42808588
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||    
T  42808631 tacacatgcgtgacttaagtcacgcagcattagttaactgacgc 42808588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44158309 - 44158359
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgctagttta 51  Q
    |||||||| | ||||||||| ||||  ||||||||||||||||||||||||    
T  44158309 tacacatgtgcgacttaagttacgccgcatgagttaactcacgctagttta 44158359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 14913435 - 14913463
Alignment:
Q  15 ttaagtcacgcaacatgagttaactcacg 43  Q
    |||||||||||||||||||||||||||||    
T  14913435 ttaagtcacgcaacatgagttaactcacg 14913463  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19004947 - 19004907
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactca 41  Q
    |||||||||||||||||| ||||||  ||||||||||||||    
T  19004947 tacacatgcgtgacttaaatcacgccgcatgagttaactca 19004907  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 36701347 - 36701379
Alignment:
Q  12 gacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||||||||||||||    
T  36701347 gacttaagtcacgcaacatgagttaactcacgc 36701379  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45156028 - 45156072
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgct 45  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||    
T  45156028 tacacatgcgtgacttaaatcacgctgcatgagttaactcacgct 45156072  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 7130655 - 7130616
Alignment:
Q  5 catgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  7130655 catgcgtgacttaagtcacgctgcatgagttaactcacgc 7130616  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13461201 - 13461244
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||    
T  13461201 tacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 13461244  T

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Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42432086 - 42432043
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||    
T  42432086 tacatatgcgtgatttaagtcacgctacatgagttaactcacgc 42432043  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7130146 - 7130187
Alignment:
Q  4 acatgcgtgacttaagtcacgcaacatgagttaactcacgct 45  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  7130146 acatgcgtgacttaagtcacgctgcgtgagttaactcacgct 7130187  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39872225 - 39872184
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcac 42  Q
    |||||||| ||||||||||||||||  |||||||||||||||    
T  39872225 tacacatgtgtgacttaagtcacgctgcatgagttaactcac 39872184  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 41721008 - 41720967
Alignment:
Q  5 catgcgtgacttaagtcacgcaacatgagttaactcacgcta 46  Q
    ||||||||| ||||||||||| || |||||||||||||||||    
T  41721008 catgcgtgatttaagtcacgctacgtgagttaactcacgcta 41720967  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 33220736 - 33220700
Alignment:
Q  8 gcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    ||||||||||||||||||| | |||||||||||||||    
T  33220736 gcgtgacttaagtcacgcagcgtgagttaactcacgc 33220700  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42431685 - 42431725
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactca 41  Q
    |||||||||||||||||||||| ||  ||||||||||||||    
T  42431685 tacacatgcgtgacttaagtcatgctgcatgagttaactca 42431725  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45156412 - 45156368
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgct 45  Q
    |||||||||||||||||||||||||  | ||||||| ||||||||    
T  45156412 tacacatgcgtgacttaagtcacgctgcttgagttatctcacgct 45156368  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42629244 - 42629201
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgc 44  Q
    ||||||||| |||||||||||||||  |||||||||||||||||    
T  42629244 tacacatgcatgacttaagtcacgctgcatgagttaactcacgc 42629201  T

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Target: scaffold1107 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1107
Description:

Target: scaffold1107; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1964 - 1915
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgctagttt 50  Q
    |||| |||||||||||||||||||   | |||||||||||||||||||||    
T  1964 tacagatgcgtgacttaagtcacgttgcgtgagttaactcacgctagttt 1915  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 186959 - 187004
Alignment:
Q  1 tacacatgcgtgacttaagtcacgcaacatgagttaactcacgcta 46  Q
    |||||||| |||||||||||||||   |||||||||||||||||||    
T  186959 tacacatgtgtgacttaagtcacgttgcatgagttaactcacgcta 187004  T

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