View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5448_high_15 (Length: 345)
Name: NF5448_high_15
Description: NF5448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5448_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 32531660 - 32531978
Alignment:
| Q |
1 |
ttaataactatgtactttgatgtgaccaaactctaaattgtgtgccattggggcatatatcgcgtcgcgcagtttaaattctctactgtccgtaatagtt |
100 |
Q |
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| T |
32531660 |
ttaataactatgtactttgatgtgaccaaactctaaattgtgtgccattggggcatatatcgcgtc-cgcagtttaaattctctaccgtttgtaatagtt |
32531758 |
T |
|
| Q |
101 |
taaaatcgattttattattgtataatttgagccgttcaatcttaaattaacgatatcgcgcataaatgtgtgattctgttacaaaataaaatctggatcc |
200 |
Q |
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| T |
32531759 |
taaaatcgattttattattgtataatttgagccgttcaatcttaaattaacgatatcgtgcgtaaatgtgtgattctctttcaaaataaaatctggatcc |
32531858 |
T |
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| Q |
201 |
gtgaattttcctcattcttttgctggattttgcaatctgtggtctgagtcagggacaggaactggag--ttgtaacaaacttatgcatgtgggctgtgga |
298 |
Q |
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| T |
32531859 |
gtgaattttcctcattcttttgctggattttgcaatctgtggtctgagt------caggaactggagttttgtaacaaacttttgcatgtgggctgtgga |
32531952 |
T |
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| Q |
299 |
ggaatctgattgttctatgttatgtt |
324 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32531953 |
ggaatctgattgttctatgttatgtt |
32531978 |
T |
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