View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5448_high_41 (Length: 225)
Name: NF5448_high_41
Description: NF5448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5448_high_41 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 44497086 - 44496902
Alignment:
| Q |
14 |
aaaataggaatcgagaaccaacattcggtattagttctaattagtacgaatgtattgagagagaaaaactcatattttctgacttaaataaataaataaa |
113 |
Q |
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| T |
44497086 |
aaaataggaatcgagaaccaacattcggtattagttctaattagtacgaatgtattgagagagaaaaactcatattttctgacttaaataaataaataaa |
44496987 |
T |
|
| Q |
114 |
tacagttatacctaaatgcatggatgaaatagtttaaataatcttaaatgaaaaataagttaaataaatagttcttggcgtttgt |
198 |
Q |
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| T |
44496986 |
tacagttatacctaaatgcatggatgaaatagtttaaataatcttaaatgaaaaataagttaaataaatagttcttggcgtttgt |
44496902 |
T |
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