View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5448_low_25 (Length: 260)
Name: NF5448_low_25
Description: NF5448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5448_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 44381289 - 44381522
Alignment:
| Q |
18 |
tcttgctgggaaaggttggaccttttttaaaacgaaggaaaacccttctgtggatcactgtggtggaggtgttgtataccttttcaggaaggttgatgtg |
117 |
Q |
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| T |
44381289 |
tcttgctgggaaaggttggaccttttttaaaacgaaggaaaacccttctgtggatcactgtggtggaggtgttgtataccttttcaggaaggttgatgtg |
44381388 |
T |
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| Q |
118 |
aaccgggttcgagtgggtcgggttggagcacctgatggggcttgtagagtgagggaactgaggttgcctcatttggattttgaaaatgctcctttgagga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
44381389 |
aaccgggttcgagtgggtcgggttggagcacctgatggggcttgtagagtgagggaactgaggttgcctcatttggattttgaaaatgctcctttgaaga |
44381488 |
T |
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| Q |
218 |
ttttgcagtatattttgttgatgactgatgatgt |
251 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
44381489 |
ttttgcagtatattttgttgatgactgatgatgt |
44381522 |
T |
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