View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5448_low_30 (Length: 252)
Name: NF5448_low_30
Description: NF5448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5448_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 41581488 - 41581252
Alignment:
| Q |
1 |
tgcgaattagattcattttcctttgtaaacaacaattatgaatttatgatactttatgtatgtgttaagtggcttgacataattgccatagtgatttcta |
100 |
Q |
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| T |
41581488 |
tgcgaattggattcattttcctttgtaaacaacaattatgaatttatgatactttatgtatgtgttaagtggcttgacataattgccatagtgatttcta |
41581389 |
T |
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| Q |
101 |
tttgtttgcaaatgattgcttgattaaaagtgggtattatggtagttttaacaaaggaggcgaatgaactgagtaggtgaaagattcgaccatcaaattg |
200 |
Q |
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| T |
41581388 |
tttgtttgcaaatgattgcttgattaaaagtgggtattatggtagttttaacaaaggaggcgaatgaactgagtaggtggaagattcgaccatcaaattg |
41581289 |
T |
|
| Q |
201 |
agagggaacatttaacgaatatgcgcttgctataccc |
237 |
Q |
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| T |
41581288 |
agagggaacatttaacgaatatgcgcttgctataccc |
41581252 |
T |
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