View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5448_low_4 (Length: 516)

Name: NF5448_low_4
Description: NF5448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5448_low_4
NF5448_low_4
[»] chr8 (40 HSPs)
chr8 (1-307)||(29473354-29473660)
chr8 (375-497)||(29473164-29473286)
chr8 (50-307)||(29465844-29466093)
chr8 (380-498)||(29465640-29465758)
chr8 (226-285)||(29345073-29345132)
chr8 (219-285)||(3823128-3823194)
chr8 (219-285)||(17103941-17104007)
chr8 (219-285)||(17824692-17824758)
chr8 (219-298)||(6817049-6817128)
chr8 (242-285)||(15251620-15251663)
chr8 (242-285)||(26399083-26399126)
chr8 (242-289)||(27910836-27910883)
chr8 (242-289)||(27957255-27957302)
chr8 (242-285)||(31399584-31399627)
chr8 (242-285)||(32247927-32247970)
chr8 (219-285)||(4330973-4331039)
chr8 (219-285)||(21350473-21350539)
chr8 (219-285)||(33652562-33652628)
chr8 (219-285)||(43431635-43431701)
chr8 (242-298)||(4647818-4647874)
chr8 (242-298)||(19256230-19256286)
chr8 (242-285)||(5670245-5670288)
chr8 (242-285)||(11938763-11938806)
chr8 (219-298)||(17810293-17810372)
chr8 (242-285)||(18010136-18010179)
chr8 (242-285)||(24636670-24636713)
chr8 (219-298)||(29350918-29350997)
chr8 (242-285)||(33413046-33413089)
chr8 (219-289)||(3692243-3692313)
chr8 (219-285)||(6816459-6816525)
chr8 (219-285)||(9915116-9915182)
chr8 (219-285)||(19240862-19240928)
chr8 (219-285)||(19314046-19314112)
chr8 (219-285)||(24576100-24576166)
chr8 (219-285)||(37992094-37992160)
chr8 (219-285)||(40289497-40289562)
chr8 (219-284)||(5879199-5879264)
chr8 (242-298)||(24193259-24193315)
chr8 (244-288)||(24479871-24479915)
chr8 (1-45)||(29466813-29466857)
[»] chr3 (54 HSPs)
chr3 (219-285)||(28389966-28390032)
chr3 (219-285)||(26830518-26830584)
chr3 (219-284)||(1628208-1628273)
chr3 (219-284)||(31433730-31433795)
chr3 (226-285)||(5260937-5260996)
chr3 (219-298)||(9652571-9652650)
chr3 (219-298)||(11007746-11007825)
chr3 (219-298)||(18539797-18539876)
chr3 (226-285)||(23217284-23217343)
chr3 (219-298)||(49915444-49915523)
chr3 (219-285)||(4393426-4393492)
chr3 (219-285)||(17582377-17582443)
chr3 (219-285)||(27212857-27212923)
chr3 (219-285)||(27449081-27449147)
chr3 (226-298)||(11915758-11915830)
chr3 (226-285)||(19610338-19610397)
chr3 (226-285)||(46942487-46942546)
chr3 (219-285)||(7623607-7623673)
chr3 (219-285)||(8543462-8543528)
chr3 (219-285)||(16299854-16299920)
chr3 (219-289)||(17762635-17762705)
chr3 (219-285)||(18104606-18104672)
chr3 (219-289)||(19063955-19064025)
chr3 (219-285)||(19269940-19270006)
chr3 (219-285)||(29215985-29216051)
chr3 (219-285)||(30219331-30219397)
chr3 (219-284)||(25882563-25882628)
chr3 (242-298)||(6718726-6718782)
chr3 (242-298)||(13905101-13905157)
chr3 (226-285)||(1311035-1311094)
chr3 (246-285)||(8546265-8546304)
chr3 (242-285)||(11219154-11219197)
chr3 (242-285)||(13921341-13921384)
chr3 (226-285)||(19545510-19545569)
chr3 (246-289)||(20088420-20088463)
chr3 (242-285)||(21020081-21020124)
chr3 (242-285)||(23773493-23773536)
chr3 (242-285)||(26098829-26098872)
chr3 (242-289)||(26390706-26390753)
chr3 (242-285)||(29236060-29236103)
chr3 (242-285)||(48404876-48404919)
chr3 (219-285)||(11085418-11085484)
chr3 (219-285)||(18091623-18091689)
chr3 (226-284)||(19223449-19223507)
chr3 (219-285)||(29704108-29704174)
chr3 (219-285)||(29956365-29956431)
chr3 (219-285)||(30005520-30005586)
chr3 (219-285)||(36543742-36543808)
chr3 (242-284)||(43329840-43329882)
chr3 (219-284)||(8110332-8110397)
chr3 (219-284)||(8428164-8428229)
chr3 (219-284)||(20615420-20615485)
chr3 (242-298)||(5565738-5565794)
chr3 (226-298)||(31250088-31250160)
[»] chr1 (43 HSPs)
chr1 (221-289)||(7181627-7181695)
chr1 (219-285)||(12370017-12370083)
chr1 (219-285)||(13523037-13523103)
chr1 (219-298)||(12161811-12161890)
chr1 (219-298)||(22158799-22158878)
chr1 (219-298)||(23457894-23457973)
chr1 (219-298)||(52183675-52183754)
chr1 (219-285)||(9464100-9464166)
chr1 (219-285)||(15243082-15243148)
chr1 (219-285)||(38531246-38531312)
chr1 (219-285)||(41071911-41071977)
chr1 (242-291)||(12174836-12174885)
chr1 (219-284)||(19081725-19081790)
chr1 (219-284)||(19129613-19129678)
chr1 (219-298)||(9110038-9110117)
chr1 (219-285)||(6459214-6459280)
chr1 (219-285)||(12720806-12720872)
chr1 (219-285)||(14486708-14486774)
chr1 (219-285)||(14760864-14760930)
chr1 (219-285)||(20408236-20408302)
chr1 (219-285)||(22603545-22603611)
chr1 (219-285)||(22789667-22789733)
chr1 (219-285)||(41752430-41752496)
chr1 (219-285)||(45839289-45839355)
chr1 (242-288)||(50092371-50092417)
chr1 (221-298)||(9259246-9259323)
chr1 (226-283)||(29549422-29549479)
chr1 (228-284)||(26825246-26825302)
chr1 (226-298)||(32046880-32046952)
chr1 (242-298)||(41120800-41120856)
chr1 (242-285)||(4340427-4340470)
chr1 (219-298)||(6412116-6412195)
chr1 (219-298)||(17661047-17661126)
chr1 (242-285)||(19865264-19865307)
chr1 (245-284)||(20290397-20290436)
chr1 (226-285)||(46339521-46339580)
chr1 (242-285)||(50845406-50845449)
chr1 (219-285)||(7830028-7830094)
chr1 (219-285)||(16258562-16258628)
chr1 (219-285)||(18890625-18890691)
chr1 (219-285)||(18894976-18895042)
chr1 (219-285)||(46865240-46865306)
chr1 (237-285)||(11917801-11917849)
[»] chr5 (33 HSPs)
chr5 (226-285)||(17039707-17039766)
chr5 (219-298)||(17079402-17079481)
chr5 (219-285)||(27428088-27428154)
chr5 (219-284)||(12045724-12045789)
chr5 (219-284)||(20959505-20959570)
chr5 (219-284)||(22649406-22649471)
chr5 (219-291)||(11927856-11927928)
chr5 (219-283)||(13974156-13974220)
chr5 (219-298)||(23975632-23975711)
chr5 (219-289)||(16121911-16121981)
chr5 (219-285)||(33818637-33818703)
chr5 (219-285)||(35620419-35620485)
chr5 (219-291)||(17986726-17986798)
chr5 (242-285)||(746944-746987)
chr5 (219-298)||(15060970-15061049)
chr5 (226-285)||(23408984-23409043)
chr5 (219-285)||(618291-618357)
chr5 (219-285)||(8886927-8886993)
chr5 (219-285)||(23423832-23423898)
chr5 (219-285)||(36196391-36196457)
chr5 (219-289)||(36831962-36832032)
chr5 (244-289)||(16631946-16631991)
chr5 (242-285)||(10494757-10494800)
chr5 (242-285)||(25397864-25397907)
chr5 (242-285)||(40484064-40484107)
chr5 (219-285)||(12328302-12328368)
chr5 (219-285)||(28265551-28265617)
chr5 (219-285)||(32726802-32726868)
chr5 (242-284)||(36716277-36716319)
chr5 (221-285)||(7003806-7003868)
chr5 (219-284)||(7888794-7888859)
chr5 (242-298)||(4125251-4125307)
chr5 (242-298)||(8108923-8108979)
[»] chr2 (30 HSPs)
chr2 (219-298)||(28262357-28262436)
chr2 (219-285)||(29998635-29998701)
chr2 (219-298)||(23388441-23388520)
chr2 (219-285)||(30783331-30783397)
chr2 (219-285)||(31266347-31266413)
chr2 (219-285)||(32300444-32300510)
chr2 (219-284)||(8430289-8430354)
chr2 (219-284)||(32185825-32185890)
chr2 (220-285)||(37802454-37802519)
chr2 (219-298)||(1141529-1141608)
chr2 (219-298)||(15636798-15636877)
chr2 (242-285)||(28319655-28319698)
chr2 (219-285)||(27327609-27327675)
chr2 (219-285)||(27523004-27523070)
chr2 (219-285)||(41637611-41637677)
chr2 (219-284)||(2556088-2556153)
chr2 (219-284)||(21293788-21293853)
chr2 (245-285)||(22140440-22140480)
chr2 (242-298)||(43408574-43408630)
chr2 (242-285)||(13613169-13613212)
chr2 (219-298)||(20065137-20065216)
chr2 (242-285)||(23858033-23858076)
chr2 (219-298)||(29749466-29749545)
chr2 (242-285)||(32008968-32009011)
chr2 (219-285)||(18551329-18551395)
chr2 (219-285)||(18916476-18916542)
chr2 (219-285)||(26687767-26687833)
chr2 (243-285)||(28841418-28841460)
chr2 (219-285)||(37724068-37724134)
chr2 (242-298)||(14757184-14757240)
[»] scaffold0576 (1 HSPs)
scaffold0576 (219-285)||(9305-9371)
[»] chr7 (35 HSPs)
chr7 (219-285)||(22501591-22501657)
chr7 (237-289)||(11852023-11852075)
chr7 (219-298)||(11036504-11036583)
chr7 (219-298)||(20174017-20174096)
chr7 (226-285)||(45664772-45664831)
chr7 (219-285)||(816267-816333)
chr7 (219-285)||(10050912-10050978)
chr7 (219-285)||(22486391-22486457)
chr7 (219-285)||(23577265-23577331)
chr7 (219-285)||(31042248-31042314)
chr7 (219-285)||(31425587-31425653)
chr7 (219-285)||(40847511-40847577)
chr7 (219-284)||(20429462-20429527)
chr7 (219-284)||(37135362-37135427)
chr7 (219-298)||(28800875-28800954)
chr7 (219-285)||(15014481-15014547)
chr7 (219-289)||(20924030-20924100)
chr7 (219-285)||(24605835-24605901)
chr7 (219-285)||(36636503-36636569)
chr7 (219-285)||(38057629-38057695)
chr7 (219-285)||(47523726-47523792)
chr7 (219-284)||(27806015-27806080)
chr7 (242-298)||(2650891-2650947)
chr7 (242-298)||(3904541-3904597)
chr7 (226-285)||(1842898-1842957)
chr7 (226-289)||(9698610-9698673)
chr7 (242-285)||(21917410-21917453)
chr7 (219-285)||(27130331-27130395)
chr7 (226-285)||(32267351-32267410)
chr7 (219-298)||(42926483-42926562)
chr7 (219-285)||(1907352-1907418)
chr7 (219-285)||(23232036-23232102)
chr7 (226-284)||(23750813-23750871)
chr7 (226-284)||(25777189-25777247)
chr7 (219-284)||(24140447-24140512)
[»] chr6 (31 HSPs)
chr6 (219-285)||(9892960-9893026)
chr6 (219-285)||(15364534-15364600)
chr6 (219-298)||(21140936-21141015)
chr6 (219-285)||(12845000-12845066)
chr6 (219-285)||(22579425-22579491)
chr6 (219-285)||(25397999-25398065)
chr6 (219-285)||(27705419-27705485)
chr6 (219-285)||(28364908-28364974)
chr6 (242-298)||(26224448-26224504)
chr6 (242-285)||(20182165-20182208)
chr6 (242-285)||(22153783-22153826)
chr6 (242-285)||(23281806-23281849)
chr6 (219-285)||(2992612-2992678)
chr6 (219-285)||(6598461-6598527)
chr6 (219-285)||(12351662-12351728)
chr6 (219-285)||(18033601-18033667)
chr6 (219-285)||(18492366-18492432)
chr6 (219-285)||(21691572-21691638)
chr6 (219-285)||(27796910-27796976)
chr6 (219-284)||(5270389-5270454)
chr6 (219-284)||(11530222-11530287)
chr6 (219-284)||(12680261-12680326)
chr6 (242-298)||(26939607-26939663)
chr6 (226-285)||(495703-495762)
chr6 (242-285)||(14872139-14872182)
chr6 (219-298)||(21990237-21990316)
chr6 (242-284)||(5192266-5192308)
chr6 (242-284)||(12205262-12205304)
chr6 (219-285)||(14036617-14036683)
chr6 (246-300)||(33439067-33439121)
chr6 (219-284)||(14886558-14886623)
[»] scaffold0006 (1 HSPs)
scaffold0006 (226-298)||(121050-121122)
[»] scaffold0058 (1 HSPs)
scaffold0058 (219-298)||(74604-74683)
[»] scaffold0047 (1 HSPs)
scaffold0047 (219-298)||(58579-58658)
[»] scaffold0007 (3 HSPs)
scaffold0007 (222-285)||(3742-3805)
scaffold0007 (219-285)||(276210-276276)
scaffold0007 (219-285)||(202771-202837)
[»] scaffold0001 (3 HSPs)
scaffold0001 (219-298)||(84300-84379)
scaffold0001 (219-285)||(8186-8252)
scaffold0001 (219-285)||(21918-21984)
[»] chr4 (32 HSPs)
chr4 (219-298)||(18744133-18744212)
chr4 (219-298)||(46286292-46286371)
chr4 (219-285)||(5399604-5399670)
chr4 (219-285)||(18051834-18051900)
chr4 (219-285)||(22128388-22128454)
chr4 (219-285)||(25147716-25147782)
chr4 (219-285)||(55309289-55309355)
chr4 (221-298)||(27040088-27040165)
chr4 (226-298)||(32175800-32175872)
chr4 (226-285)||(9913260-9913319)
chr4 (219-298)||(19680487-19680566)
chr4 (242-285)||(29625343-29625386)
chr4 (242-285)||(37761918-37761961)
chr4 (242-285)||(45091292-45091335)
chr4 (219-285)||(2275754-2275820)
chr4 (219-285)||(22156677-22156743)
chr4 (219-285)||(33914054-33914120)
chr4 (243-285)||(36689696-36689738)
chr4 (219-285)||(37378699-37378765)
chr4 (242-298)||(13028879-13028935)
chr4 (242-298)||(14944764-14944820)
chr4 (226-289)||(13564987-13565050)
chr4 (242-285)||(19839197-19839240)
chr4 (219-285)||(24682403-24682467)
chr4 (226-285)||(38223512-38223571)
chr4 (226-285)||(45532655-45532714)
chr4 (242-284)||(4586835-4586877)
chr4 (219-285)||(8878878-8878944)
chr4 (219-285)||(30269064-30269130)
chr4 (219-285)||(30283059-30283125)
chr4 (242-284)||(38619865-38619907)
chr4 (232-285)||(18714910-18714963)
[»] scaffold0599 (1 HSPs)
scaffold0599 (226-298)||(7509-7581)
[»] scaffold0717 (1 HSPs)
scaffold0717 (219-285)||(995-1061)
[»] scaffold0603 (1 HSPs)
scaffold0603 (219-285)||(6055-6121)
[»] scaffold0219 (1 HSPs)
scaffold0219 (219-285)||(19600-19666)
[»] scaffold0184 (1 HSPs)
scaffold0184 (219-285)||(7453-7519)
[»] scaffold0087 (1 HSPs)
scaffold0087 (219-285)||(37863-37929)
[»] scaffold0069 (1 HSPs)
scaffold0069 (219-285)||(10155-10221)
[»] scaffold0240 (1 HSPs)
scaffold0240 (242-298)||(15053-15109)
[»] scaffold0076 (1 HSPs)
scaffold0076 (242-285)||(26503-26546)
[»] scaffold0023 (1 HSPs)
scaffold0023 (242-285)||(39779-39822)
[»] scaffold0014 (1 HSPs)
scaffold0014 (242-285)||(22231-22274)
[»] scaffold0108 (1 HSPs)
scaffold0108 (219-285)||(12650-12715)
[»] scaffold0655 (1 HSPs)
scaffold0655 (226-298)||(3225-3295)


Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 29473660 - 29473354
Alignment:
Q  1 ctcagtaagttaattacattaaacctatttgaataatttagtcttttgtttataattaatctaatttcattgtccttttttcttatgttgaacagattga 100  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29473660 ctcagtaagttaattgcattaagcatatttgaataatttagtcttttgtttataattaatctaatttcattgtccttttttcttatgttgaacagattga 29473561  T
Q  101 ccttcactttggttactatttactttggggtaaggctttcaatttcagattcttgtacattatagtaaaagataaattaacatgaaaatgtgatatatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29473560 ccttcactttggttactatttactttggggtaaggctttcaatttcagattcttgtacattatagtaaaagataaattaacatgaaaatgtgatatatat 29473461  T
Q  201 ctcaataataataatgttaaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaattag 300  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29473460 ctcaataataaaaatgctaaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgttactaaattttgtgacgaggaaattag 29473361  T
Q  301 agagggg 307  Q
    |||||||    
T  29473360 agagggg 29473354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 29473286 - 29473164
Alignment:
Q  375 gttcgtatattatttaagtgacatatgctctcaattttactttcagcttgcatcatcattctcactatatggatgtttatttaaacacaaaaaatttggt 474  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29473286 gttcctatattatttaagtgacatatgctctcaattttactttcagcttgcatcatcattctcactatatggatgtttatttaaacacaaaaaatttggt 29473187  T
Q  475 ggaagaacagtcaatggtgcttc 497  Q
    |||||||||||||||||||||||    
T  29473186 ggaagaacagtcaatggtgcttc 29473164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 50 - 307
Target Start/End: Complemental strand, 29466093 - 29465844
Alignment:
Q  50 ttataattaatctaatttcattgtccttttttcttatgttgaacagattgaccttcactttggttactatttactttggggtaaggctttcaatttcaga 149  Q
    ||||||||| |||||||  |||||  ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  29466093 ttataattactctaattgtattgtg-ttttttcttgtgttgaacaggttgaccttcactttggtcactatttactttggggtaaggctttgaatttcaga 29465995  T
Q  150 ttcttgtacattatagtaaaagata-aattaacatgaaaatgtgatatatatctcaataataataatgttaaattattgagggaaatatagaaagggaaa 248  Q
     ||   |||||||||| |||| ||| |||| |||||||||||||  |||||||||| |||||| || ||||| ||| | |||| ||| | |||| |||||    
T  29465994 ctc---tacattatagcaaaaaatataatttacatgaaaatgtg--atatatctcactaataaaaaagttaagttagttaggg-aatttggaaatggaaa 29465901  T
Q  249 acgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaattagagagggg 307  Q
    || |||||| | ||||| ||||  |||||||||||||||| ||||| ||||||||||||    
T  29465900 acatgaaattcgtctctaattc--tcactaaattttgtgaggaggatattagagagggg 29465844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 498
Target Start/End: Complemental strand, 29465758 - 29465640
Alignment:
Q  380 tatattatttaagtgacatatgctctcaattttactttcagcttgcatcatcattctcactatatggatgtttatttaaacacaaaaaatttggtggaag 479  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||||  ||||||| | |||    
T  29465758 tatattatttaagtgacttgtgccctcaattttactttcagcttggatcatctttctcaatatatggatgtttattaaaacacaatgaatttggggcaag 29465659  T
Q  480 aacagtcaatggtgcttct 498  Q
    |||||| || |||||||||    
T  29465658 aacagtaaacggtgcttct 29465640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 29345073 - 29345132
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||| |||||||||||||||||| || || |||||||||||||||||||    
T  29345073 tgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttg 29345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 3823128 - 3823194
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  3823128 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 3823194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 17104007 - 17103941
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  17104007 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 17103941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 17824758 - 17824692
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  17824758 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 17824692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 6817049 - 6817128
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| |||  |||||||| || |||||  ||||| ||||||||||||||||||||||| | ||||||    
T  6817049 aaattagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatt 6817128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 15251620 - 15251663
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  15251620 agggaaaacgtgaaatccttctctaattctgtcactaaattttg 15251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 26399126 - 26399083
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  26399126 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 26399083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 27910883 - 27910836
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  27910883 agggaaaacatgaaatccctctctaattccgtcactaaattttgtgac 27910836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 27957302 - 27957255
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  27957302 agggaaaacatgaaatccctctctaattccgtcactaaattttgtgac 27957255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 31399627 - 31399584
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  31399627 agggaaaacgtgaaatccatctctaattccgtcactaaattttg 31399584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 32247927 - 32247970
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  32247927 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 32247970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 4330973 - 4331039
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||| | ||||| |||||||||||||||||||    
T  4330973 aaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttg 4331039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 21350473 - 21350539
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||| ||||||| |||||| ||||| |||||||||||||||||||    
T  21350473 aaattagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttg 21350539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 33652562 - 33652628
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||||||||| | |||||||||||||||||    
T  33652562 aaattagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttg 33652628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 43431701 - 43431635
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| ||| |||||||||||||||    
T  43431701 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttg 43431635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 4647874 - 4647818
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  4647874 agggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatt 4647818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 19256230 - 19256286
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  19256230 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 19256286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 5670288 - 5670245
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  5670288 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 5670245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 11938763 - 11938806
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  11938763 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 11938806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 17810293 - 17810372
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| ||| ||||||||||||||| ||| | ||||||    
T  17810293 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatt 17810372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 18010179 - 18010136
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  18010179 agggaaaacatgaaatccctctctaattccgtcactaaattttg 18010136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 24636670 - 24636713
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  24636670 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 24636713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 29350918 - 29350997
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| ||| ||||||||||||||| ||| | ||||||    
T  29350918 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatt 29350997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 33413089 - 33413046
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  33413089 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 33413046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 3692313 - 3692243
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||| |||||||||| || | ||| ||||||| |||||||||||| ||||| | |||||||||| ||||    
T  3692313 aaattagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgac 3692243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 6816525 - 6816459
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||| ||||||||||||    
T  6816525 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttg 6816459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 9915182 - 9915116
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| || | ||||||||||||||    
T  9915182 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttg 9915116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 19240862 - 19240928
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  ||||||||||| |||| | ||||| |||||||||||||||||||    
T  19240862 aaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttg 19240928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 19314046 - 19314112
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  ||||||||||| |||| | ||||| |||||||||||||||||||    
T  19314046 aaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttg 19314112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 24576166 - 24576100
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||  ||||| |||||||||||||||||||    
T  24576166 aaattagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttg 24576100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 37992094 - 37992160
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||  ||||||||| |||||||  ||||| |||||||||||||||||||    
T  37992094 aaattagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttg 37992160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 40289562 - 40289497
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| || || |||||||||||||||||||    
T  40289562 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttg 40289497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 5879199 - 5879264
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| |||  ||| ||||||| |||| | ||||| ||||||||||||||||||    
T  5879199 aaattagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaatttt 5879264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 24193315 - 24193259
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||| |||||||  ||||| ||||||||||||||||||| ||| | ||||||    
T  24193315 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatt 24193259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 24479915 - 24479871
Alignment:
Q  244 ggaaaacgtgaaatccttctctgattccgtcactaaattttgtga 288  Q
    |||||||||||||| | ||||| |||| |||||||||||||||||    
T  24479915 ggaaaacgtgaaattcctctctaattctgtcactaaattttgtga 24479871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29466857 - 29466813
Alignment:
Q  1 ctcagtaagttaattacattaaacctatttgaataatttagtctt 45  Q
    |||||||||||||||||||||||  ||||||| || |||||||||    
T  29466857 ctcagtaagttaattacattaaatatatttgagtagtttagtctt 29466813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 28389966 - 28390032
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||    
T  28389966 aaattagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttg 28390032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 26830584 - 26830518
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||||| |||||||||| ||||||||    
T  26830584 aaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttg 26830518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 1628208 - 1628273
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||||| ||| ||||||||||||||    
T  1628208 aaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaatttt 1628273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 31433730 - 31433795
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  31433730 aaattagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaatttt 31433795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 5260937 - 5260996
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  5260937 tgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 5260996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 9652571 - 9652650
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  9652571 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatt 9652650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 11007825 - 11007746
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  11007825 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 11007746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 18539797 - 18539876
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  18539797 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 18539876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 23217343 - 23217284
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||| |||| |||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  23217343 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttg 23217284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 49915444 - 49915523
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  49915444 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatt 49915523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 4393492 - 4393426
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||||    
T  4393492 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 4393426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 17582443 - 17582377
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||||    
T  17582443 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 17582377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 27212923 - 27212857
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||| ||| |||||||||||||| ||| | |||||||||||||||||||    
T  27212923 aaattagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttg 27212857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 27449081 - 27449147
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  27449081 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 27449147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 11915758 - 11915830
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||||| |||  ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  11915758 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 11915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 19610338 - 19610397
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  19610338 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 19610397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 46942487 - 46942546
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||| | |||| |||||||||||||||||| ||||| |||| ||||||||||||||    
T  46942487 tgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttg 46942546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 7623673 - 7623607
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||| ||||||||| ||||| |||||||||||||||||||    
T  7623673 aaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttg 7623607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 8543462 - 8543528
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||| |||||||||    
T  8543462 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttg 8543528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 16299854 - 16299920
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  16299854 aaattagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 16299920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 17762635 - 17762705
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||| ||||||| || |||  ||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  17762635 aaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgac 17762705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18104672 - 18104606
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  18104672 aaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 18104606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 19063955 - 19064025
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||| ||||||| || |||  ||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  19063955 aaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgac 19064025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 19270006 - 19269940
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||| | |||||||||||||||||||    
T  19270006 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttg 19269940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 29215985 - 29216051
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| ||||| |||||||||||||    
T  29215985 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttg 29216051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 30219331 - 30219397
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||| ||||| |||||||| ||||| |||||||||||||||||||    
T  30219331 aaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttg 30219397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 25882563 - 25882628
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| ||||||||||||||||||    
T  25882563 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaatttt 25882628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 6718726 - 6718782
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||||||||||||| | ||| ||||||||||||||||||| ||| | ||||||    
T  6718726 agggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatt 6718782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 13905157 - 13905101
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  13905157 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 13905101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 1311094 - 1311035
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||  | ||||||||| |||||| ||||| |||||||||||||||||||    
T  1311094 tgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttg 1311035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 285
Target Start/End: Original strand, 8546265 - 8546304
Alignment:
Q  246 aaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttg 8546304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 11219154 - 11219197
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||    
T  11219154 agggaaaacgtgaaatccctctctaattccgtcattaaattttg 11219197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 13921341 - 13921384
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  13921341 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 13921384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 19545510 - 19545569
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||  ||| ||||||| |||||| ||||| |||||||||||||||||||    
T  19545510 tgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttg 19545569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 20088420 - 20088463
Alignment:
Q  246 aaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    ||||| |||||||||||||| ||||| |||||||||||||||||    
T  20088420 aaaacatgaaatccttctctaattccatcactaaattttgtgac 20088463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 21020081 - 21020124
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||| | |||||||||||| |||||||||||||||||||    
T  21020081 agggaaaacataaaatccttctctaattccgtcactaaattttg 21020124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 23773493 - 23773536
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  23773493 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 23773536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 26098829 - 26098872
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  26098829 agggaaaacatgaaatccctctctaattccgtcactaaattttg 26098872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 26390753 - 26390706
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    ||||| ||| |||||||| ||||| |||||||||||||||||||||||    
T  26390753 agggataacatgaaatccctctctaattccgtcactaaattttgtgac 26390706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 29236060 - 29236103
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  29236060 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 29236103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 48404876 - 48404919
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  48404876 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 48404919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 11085484 - 11085418
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||| ||||| |||  |||||||  ||||||||| ||||| |||||||||||||||||||    
T  11085484 aaattagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttg 11085418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18091689 - 18091623
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| | |||||| ||||| |||||||||||||||||||    
T  18091689 aaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttg 18091623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 19223449 - 19223507
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||||||| |||   |||||||||| |||||| ||||| ||||||||||||||||||    
T  19223449 tgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaatttt 19223507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 29704174 - 29704108
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  || ||||||||||||||| ||| | |||||||||||||||||||    
T  29704174 aaattagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttg 29704108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 29956365 - 29956431
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||| ||||||||| | ||| |||||||||||||||||||    
T  29956365 aaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttg 29956431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 30005520 - 30005586
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||| ||||||||| | ||| |||||||||||||||||||    
T  30005520 aaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttg 30005586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 36543742 - 36543808
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  ||||||||| |||||||| ||||| ||| |||||||||||||||    
T  36543742 aaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttg 36543808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 43329882 - 43329840
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||||| || |||||||||||| ||||||||||||||||||    
T  43329882 agggaaaatgtaaaatccttctctaattccgtcactaaatttt 43329840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 8110332 - 8110397
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| |||  ||||||||||| |||| | ||||| ||||||||| ||||||||    
T  8110332 aaattagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaatttt 8110397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 8428164 - 8428229
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| ||||||| || |||  ||||||||| |||||||  ||||| ||||||||||||||||||    
T  8428164 aaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaatttt 8428229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 20615485 - 20615420
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| |||| | |||||||||||||| | ||||| |||| |||| ||||||||    
T  20615485 aaattagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaatttt 20615420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 5565738 - 5565794
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||||||||||||| ||||| |||  |||||||||||||| ||| | ||||||    
T  5565738 agggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatt 5565794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 31250088 - 31250160
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||||| |||| |||||||||   |||||| ||||| |||| |||||||||||||| ||| | ||||||    
T  31250088 tgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatt 31250160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 7181695 - 7181627
Alignment:
Q  221 attattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||| |||||||||| | | ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  7181695 attagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgac 7181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 12370083 - 12370017
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| ||| |||||||||| | |||||||||||| |||||||||||||||||||    
T  12370083 aaattagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttg 12370017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 13523103 - 13523037
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||| | |||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  13523103 aaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttg 13523037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 12161811 - 12161890
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  12161811 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 12161890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 22158799 - 22158878
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  22158799 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 22158878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 23457894 - 23457973
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  23457894 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 23457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 52183675 - 52183754
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  52183675 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 52183754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 9464100 - 9464166
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||||    
T  9464100 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 9464166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 15243082 - 15243148
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||||||||||||| | ||| |||||||||||||||||||    
T  15243082 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttg 15243148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 38531312 - 38531246
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||| |||||||||||||||||  ||||| ||||| |||||||||||||    
T  38531312 aaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttg 38531246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 41071977 - 41071911
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  41071977 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 41071911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 12174885 - 12174836
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacga 291  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  12174885 agggaaaacatgaaatccttctctaattccgtcactaaattttgcgacga 12174836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 19081725 - 19081790
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||| | |||| |||||||||||||||||| ||||| |||| |||||||||||||    
T  19081725 aaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaatttt 19081790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 19129613 - 19129678
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||| | |||| |||||||||||||||||| ||||| |||| |||||||||||||    
T  19129613 aaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaatttt 19129678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 9110117 - 9110038
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  9110117 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 9110038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 6459214 - 6459280
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  6459214 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 6459280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 12720806 - 12720872
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  12720806 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 12720872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 14486774 - 14486708
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||| |||||||||||||||||  ||||| ||||||||||| |||||||    
T  14486774 aaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttg 14486708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 14760864 - 14760930
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| || || |||||||||||||||||||    
T  14760864 aaattagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttg 14760930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 20408302 - 20408236
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||| |||||||||||    
T  20408302 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttg 20408236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 22603545 - 22603611
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||  ||||| |||||||||||||||||||    
T  22603545 aaattagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttg 22603611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 22789733 - 22789667
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||| |||||||||||||||||  | ||| |||| ||||||||||||||    
T  22789733 aaattagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttg 22789667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 41752430 - 41752496
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  41752430 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 41752496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 45839289 - 45839355
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  45839289 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 45839355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 50092417 - 50092371
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtga 288  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  50092417 agggaaaacatgaaatccctctctaattccgtcactaaattttgtga 50092371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 9259323 - 9259246
Alignment:
Q  221 attattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||| |||||||||| | |  |||||||||||||||||  ||||| ||||||||||||||||||| ||| | ||||||    
T  9259323 attagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatt 9259246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 29549422 - 29549479
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattt 283  Q
    |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||    
T  29549422 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 29549479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 26825246 - 26825302
Alignment:
Q  228 agggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| | |||| |||||||||||||||| | ||||| ||||||||||||||||||    
T  26825246 agggaattttagagagggaaaacgtgaaattcctctctaattccgtcactaaatttt 26825302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 32046880 - 32046952
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||||||  ||||||||||| |||||  ||||| |||||| |||||||||||| ||| | ||||||    
T  32046880 tgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatt 32046952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 41120856 - 41120800
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  41120856 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 41120800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 4340427 - 4340470
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  4340427 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 4340470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 6412195 - 6412116
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||| | ||||||||||||||||||| ||| | ||||||    
T  6412195 aaattagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatt 6412116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 17661047 - 17661126
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||| | ||||| ||||| ||||||||||||| ||| | ||||||    
T  17661047 aaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatt 17661126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 19865264 - 19865307
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  19865264 agggaaaacatgaaatccctctctaattccgtcactaaattttg 19865307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 20290436 - 20290397
Alignment:
Q  245 gaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  20290436 gaaaacgtgaaatcattctctaattccgtcactaaatttt 20290397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 46339580 - 46339521
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||| || ||| |||||||||| |||||||  ||||| |||||||||||||||||||    
T  46339580 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttg 46339521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 50845449 - 50845406
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  50845449 agggaaaacatgaaatccctctctaattccgtcactaaattttg 50845406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 7830028 - 7830094
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| || || ||| |||||||||||||||    
T  7830028 aaattagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttg 7830094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 16258628 - 16258562
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||| ||| ||||||||||| || ||| | |||||||||||||||||||    
T  16258628 aaattagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttg 16258562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18890691 - 18890625
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  || ||||||||||||||| ||||| ||||||| |||||||||||    
T  18890691 aaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttg 18890625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18895042 - 18894976
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||  ||||||||| |||||||| ||||| ||| |||||||||||||||    
T  18895042 aaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttg 18894976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 46865240 - 46865306
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||||||  ||| ||||| |||||||||||| ||||| ||||| | |||||||||||    
T  46865240 aaattagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttg 46865306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 11917801 - 11917849
Alignment:
Q  237 tagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||| |||||||||||||| ||| | ||| |||||||||||||||||||    
T  11917801 tagagagggaaaacgtgaactccctttctaattccgtcactaaattttg 11917849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 17039766 - 17039707
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||||||  |||||||||||||||||| ||||| |||||||||||||||||||    
T  17039766 tgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 17039707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 17079402 - 17079481
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| |||||||||||||| | |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  17079402 aaattagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 17079481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 27428154 - 27428088
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  27428154 aaattagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttg 27428088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 12045724 - 12045789
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| |||  ||||||||||| |||||||||||| ||||||||||||||||||    
T  12045724 aaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaatttt 12045789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 20959505 - 20959570
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| |||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  20959505 aaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaatttt 20959570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 22649471 - 22649406
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||| ||||| |||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  22649471 aaattaatgagagaaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 11927928 - 11927856
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacga 291  Q
    |||||| |||||||| | |||| | |||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  11927928 aaattagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacga 11927856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 13974220 - 13974156
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattt 283  Q
    |||||| |||||||||| | |  |||||||||||||||||| |||||||||||||||||||||||    
T  13974220 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaattt 13974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 23975632 - 23975711
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  23975632 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 23975711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 16121981 - 16121911
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  16121981 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgac 16121911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 33818703 - 33818637
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  33818703 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 33818637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 35620485 - 35620419
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||||||||| |||||||||||||||||||    
T  35620485 aaattaatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttg 35620419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 17986726 - 17986798
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacga 291  Q
    |||||| ||||||| || |||  ||||||||| |||||| ||||||| ||||||||||||||||||| |||||    
T  17986726 aaattagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacga 17986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 746987 - 746944
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  746987 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 746944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 15060970 - 15061049
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  ||| |||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  15060970 aaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 15061049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 23408984 - 23409043
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  23408984 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 23409043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 618291 - 618357
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  618291 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 618357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 8886993 - 8886927
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||| || |||||| ||||| |||||||||||||||||||    
T  8886993 aaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttg 8886927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 23423898 - 23423832
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||| ||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  23423898 aaattagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 23423832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 36196391 - 36196457
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||| ||||||||| ||||| |||||||||||||||||||    
T  36196391 aaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttg 36196457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 36832032 - 36831962
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||| |||||||||| |||  |||||||| || |||||| ||||| ||||| |||||||||||||||||    
T  36832032 aaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgac 36831962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 16631991 - 16631946
Alignment:
Q  244 ggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    
T  16631991 ggaaaacgtaaaatccctctctaattccgtcactaaattttgtgac 16631946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 10494757 - 10494800
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  10494757 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 10494800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 25397907 - 25397864
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  25397907 agggaaaacatgaaatccctctctaattccgtcactaaattttg 25397864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 40484064 - 40484107
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  40484064 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 40484107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 12328368 - 12328302
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||| | ||||| |||||||||||||||||||    
T  12328368 aaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttg 12328302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 28265617 - 28265551
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||| |||| |||||| ||||| |||||||||||||||||||    
T  28265617 aaattaatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttg 28265551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 32726868 - 32726802
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||| |||||| |||| |||||||| |||||||   ||||| |||||||||||||||||||    
T  32726868 aaattagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttg 32726802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 36716319 - 36716277
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||    
T  36716319 agggaaaacgtgaaatccttctctaattccttcattaaatttt 36716277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 7003868 - 7003806
Alignment:
Q  221 attattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||| |||||||||| | |  |||||||||||||||||  ||||| |||||||||||||||||||    
T  7003868 attagtgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttg 7003806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 7888794 - 7888859
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| ||||| |||| |||  ||||||||||| |||||| ||||| | ||||||||||||||||    
T  7888794 aaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaatttt 7888859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 4125307 - 4125251
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||| ||||||||  ||||| ||||||||||||||||||| ||| | ||||||    
T  4125307 agggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatt 4125251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 8108979 - 8108923
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||| |||||| | ||||| ||||||||||||||||||| ||| | ||||||    
T  8108979 agggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatt 8108923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 28262357 - 28262436
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  28262357 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatt 28262436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 29998701 - 29998635
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||| | |||| | |||||||||||||||||||||| |||||||||||||||||||    
T  29998701 aaattagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttg 29998635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 23388520 - 23388441
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  23388520 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 23388441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 30783331 - 30783397
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  30783331 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 30783397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 31266347 - 31266413
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  31266347 aaattagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttg 31266413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 32300444 - 32300510
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||||    
T  32300444 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 32300510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 8430289 - 8430354
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||    
T  8430289 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 8430354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 32185825 - 32185890
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||    
T  32185825 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 32185890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 37802519 - 37802454
Alignment:
Q  220 aattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||| |||||||||| |||| ||||||||||| |||||  ||||| |||||||||||||||||||    
T  37802519 aattagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttg 37802454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 1141529 - 1141608
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||| |||||||||||||| ||| | ||||||    
T  1141529 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatt 1141608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 15636877 - 15636798
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||| ||||||||||||||| ||| | ||||||    
T  15636877 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatt 15636798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 28319698 - 28319655
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  28319698 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 28319655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 27327609 - 27327675
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||| | |||||||||||||||||||    
T  27327609 aaattaatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttg 27327675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 27523004 - 27523070
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  27523004 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 27523070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 41637611 - 41637677
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  41637611 aaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 41637677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 2556088 - 2556153
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||| | |||| |||||||| |||||||  |||||| ||||||||||||||||||    
T  2556088 aaattagtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcactaaatttt 2556153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 21293853 - 21293788
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| | |  |||||||||||||||||  ||||| ||||||||||||||||||    
T  21293853 aaattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaatttt 21293788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 22140480 - 22140440
Alignment:
Q  245 gaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  22140480 gaaaacgtgaaatccctctctaattccgtcactaaattttg 22140440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 43408630 - 43408574
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  43408630 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 43408574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 13613212 - 13613169
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  13613212 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 13613169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 20065216 - 20065137
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  ||| |||||||||||||| ||||| |||| |||||||||||||| ||| | ||||||    
T  20065216 aaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatt 20065137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 23858076 - 23858033
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||    
T  23858076 agggaaaacgtaaaatcattctctaattccgtcactaaattttg 23858033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 29749545 - 29749466
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||| |||| |||  ||||||||| |||||||| || || ||||||||||||||||||| ||| | ||||||    
T  29749545 aaattagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatt 29749466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 32008968 - 32009011
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  32008968 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 32009011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18551395 - 18551329
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| | |||||| ||||| |||||||||||||||||||    
T  18551395 aaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttg 18551329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18916542 - 18916476
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||| ||||| |||  ||||||||| |||||||| ||||| |||| ||||||||||||||    
T  18916542 aaattagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttg 18916476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 26687833 - 26687767
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||| ||||| |||  | ||||||| |||||||| ||||| |||||||||||||||||||    
T  26687833 aaattagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttg 26687767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 28841460 - 28841418
Alignment:
Q  243 gggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||| |||||||| ||||| |||||||||||||||||||    
T  28841460 gggaaaacatgaaatccctctctaattccgtcactaaattttg 28841418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 37724134 - 37724068
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||| ||||| |||  |||||||||||||||||| || || || ||||||||||||||||    
T  37724134 aaattagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttg 37724068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 14757240 - 14757184
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||| |||||||  ||||| ||||||||||||||||||| ||| | ||||||    
T  14757240 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatt 14757184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 9371 - 9305
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||||||||| |||||||||||||||||||    
T  9371 aaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttg 9305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 22501591 - 22501657
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||||| ||||||||| |||||||||    
T  22501591 aaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttg 22501657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 11852023 - 11852075
Alignment:
Q  237 tagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11852023 tagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgac 11852075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 11036504 - 11036583
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  11036504 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 11036583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 20174017 - 20174096
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  20174017 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 20174096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 45664772 - 45664831
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  45664772 tgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 45664831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 816333 - 816267
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||| | |||||||||||||||| ||||| |||||||||||||||||||    
T  816333 aaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttg 816267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 10050978 - 10050912
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  10050978 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 10050912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 22486391 - 22486457
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  | |||||||||||||||| ||||| |||||||||||||||||||    
T  22486391 aaattagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttg 22486457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 23577331 - 23577265
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||||||||||||| | ||| |||||||||||||||||||    
T  23577331 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttg 23577265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 31042248 - 31042314
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||| | |||| |||||||||||||||||| ||||| |||| ||||||||||||||    
T  31042248 aaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttg 31042314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 31425653 - 31425587
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  31425653 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 31425587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 40847577 - 40847511
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  40847577 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 40847511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 20429462 - 20429527
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||    
T  20429462 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 20429527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 37135427 - 37135362
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||    
T  37135427 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 37135362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 28800875 - 28800954
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  28800875 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 28800954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 15014547 - 15014481
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  15014547 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 15014481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 20924100 - 20924030
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||| ||| |||||| |||  ||||||||| |||||||| ||||| |||| ||||||||||||||||||    
T  20924100 aaattagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgac 20924030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 24605835 - 24605901
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||  |||||||||||||||||  ||||| |||||||||||||||||||    
T  24605835 aaattagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttg 24605901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 36636503 - 36636569
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  36636503 aaattagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 36636569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 38057629 - 38057695
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||||||||||||| ||| | |||||||||||||| ||||    
T  38057629 aaattaatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttg 38057695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 47523792 - 47523726
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  47523792 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 47523726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 27806015 - 27806080
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| ||||||||||||||||||    
T  27806015 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaatttt 27806080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 2650947 - 2650891
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  2650947 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 2650891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 3904597 - 3904541
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  3904597 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 3904541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 1842898 - 1842957
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||  ||||||||||| |||||| || || |||||||||||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttg 1842957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 9698673 - 9698610
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||||||| |||  ||||||||||| |||| | ||||| |||||||||||||||||| ||||    
T  9698673 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgac 9698610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 21917453 - 21917410
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  21917453 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 21917410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 27130331 - 27130395
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||| |||||||| |||||||||  |||| ||||||||||||| |||||    
T  27130331 aaattaatgagggaaatttagagagggaaaatgtgaaatcc--ctctaattccgtcactaacttttg 27130395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 32267351 - 32267410
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||| ||||||||||  |||||| ||||| |||| ||||||||||||||    
T  32267351 tgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttg 32267410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 42926562 - 42926483
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||||| || |||  ||| ||||| |||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  42926562 aaattagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatt 42926483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 1907352 - 1907418
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||  ||||||||| |||||||| ||||| ||| |||||||||||||||    
T  1907352 aaattagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttg 1907418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 23232036 - 23232102
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| | ||| |||||||||||||||||||    
T  23232036 aaattagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttg 23232102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 23750871 - 23750813
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||||||| |||  |||||||| || |||||| ||||| ||||||||||||||||||    
T  23750871 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaatttt 23750813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 25777247 - 25777189
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||||||| |||| |||||||||||||||||  ||||| ||| | ||||||||||||    
T  25777247 tgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaatttt 25777189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 24140447 - 24140512
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||||| |||  ||||||||| | |||||||||||  ||||||||| ||||||||    
T  24140447 aaattagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaatttt 24140512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 9892960 - 9893026
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||||||||||||| ||||| |||||||||||||||||||    
T  9892960 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 9893026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 15364600 - 15364534
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||||||||| |||||||||||||||||||    
T  15364600 aaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttg 15364534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 21140936 - 21141015
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  21140936 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 21141015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 12845000 - 12845066
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||| |||||||||||||||||  ||||| |||||||||||||||||||    
T  12845000 aaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttg 12845066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 22579491 - 22579425
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||||    
T  22579491 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 22579425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 25397999 - 25398065
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  25397999 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 25398065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 27705419 - 27705485
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||||    
T  27705419 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 27705485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 28364908 - 28364974
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  28364908 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 28364974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 26224448 - 26224504
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  26224448 agggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatt 26224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 20182165 - 20182208
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  20182165 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 20182208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 22153826 - 22153783
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  22153826 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 22153783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 23281806 - 23281849
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  23281806 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 23281849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 2992612 - 2992678
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  2992612 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 2992678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 6598461 - 6598527
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  6598461 aaattagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttg 6598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 12351728 - 12351662
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||| ||||||||||||||||   ||||| ||||||||| |||||||||    
T  12351728 aaattagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttg 12351662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18033667 - 18033601
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| ||   ||||||||| |||||||| ||||| |||||||||||||||||||    
T  18033667 aaattagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttg 18033601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 18492366 - 18492432
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||| ||||| | | |||||||||||||||||||  |||| |||||||||||||||||||    
T  18492366 aaattagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttg 18492432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 21691638 - 21691572
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||| | |||| ||| |||||||||||||| ||||| ||| |||||||||||||||    
T  21691638 aaattagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttg 21691572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 27796976 - 27796910
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  27796976 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 27796910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 5270389 - 5270454
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| |||||||| | |||| |||||||| ||||||| | ||||| ||||||||||||||||||    
T  5270389 aaattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaatttt 5270454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 11530222 - 11530287
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| ||||| |||| |||  ||||||||| |||||||| ||||| ||||||||||||||||||    
T  11530222 aaattagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaatttt 11530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 12680326 - 12680261
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| ||||| |||| |||| |||||||||||||||| | ||||| ||||||||| ||||||||    
T  12680326 aaattagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaatttt 12680261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 26939607 - 26939663
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  26939607 agggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 26939663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 495762 - 495703
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||  ||||||||||| |||||  ||||| |||||||||||||||||||    
T  495762 tgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttg 495703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 14872139 - 14872182
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  14872139 agggaaaacatgaaatccctctctaattccgtcactaaattttg 14872182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 21990316 - 21990237
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| ||||| |||| |||  ||||||||||| |||||| ||||| ||||||||||||| ||||| ||| | ||||||    
T  21990316 aaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatt 21990237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 5192308 - 5192266
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||    
T  5192308 agggaaaacgtaaaatccctctctaattccgtcactaaatttt 5192266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 12205304 - 12205262
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||||||||||||||| || || ||||||||||||||||||    
T  12205304 agggaaaacgtgaaatccctcactaattccgtcactaaatttt 12205262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 14036617 - 14036683
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||| |||| |||||||||    
T  14036617 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttg 14036683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 33439067 - 33439121
Alignment:
Q  246 aaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaattag 300  Q
    |||| ||||||||| ||||| |||||  ||||| |||||||||||||||||||||    
T  33439067 aaaaggtgaaatccatctctaattcctccactagattttgtgacgaggaaattag 33439121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 14886558 - 14886623
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    |||||| ||||| |||| |||  ||||||||| | |||||| ||||| ||||||||||||||||||    
T  14886558 aaattagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaatttt 14886623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 121122 - 121050
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||| | |||| |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  121122 tgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 121050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 74683 - 74604
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  74683 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 74604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 58579 - 58658
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  58579 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 58658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 3742 - 3805
Alignment:
Q  222 ttattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  3742 ttattgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 3805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 276276 - 276210
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  || ||||||||||||||| ||||| |||||||||||||||||||    
T  276276 aaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttg 276210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 202771 - 202837
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||| |||| |||  ||||||||||| |||| | ||||| |||||||||||||||||||    
T  202771 aaattagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttg 202837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 84300 - 84379
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||| ||||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  84300 aaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatt 84379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 8252 - 8186
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  8252 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 8186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 21984 - 21918
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  21984 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 21918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 18744212 - 18744133
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||| |||| | ||||||    
T  18744212 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatt 18744133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 46286371 - 46286292
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  46286371 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 46286292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 5399604 - 5399670
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  5399604 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 5399670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 18051834 - 18051900
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||||||| ||||| |||||||||||||||||||    
T  18051834 aaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 18051900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 22128454 - 22128388
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||||||||||||| ||||| |||| ||||||||||||||    
T  22128454 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttg 22128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 25147716 - 25147782
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  25147716 aaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 25147782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 55309355 - 55309289
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| |||||||||||||||||||    
T  55309355 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 55309289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 27040165 - 27040088
Alignment:
Q  221 attattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||| |||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  27040165 attagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 27040088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 32175872 - 32175800
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||||| |||  ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  32175872 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 32175800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 9913260 - 9913319
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||| | |||| |||||||||||||||||| ||||| |||| ||||||||||||||    
T  9913260 tgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttg 9913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 19680566 - 19680487
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||| |||||||||| | |  ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  19680566 aaattaatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 19680487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 29625343 - 29625386
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  29625343 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 29625386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 37761961 - 37761918
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  37761961 agggaaaacgtgaaatccctctctaattccgtcactaaattttg 37761918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 45091292 - 45091335
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  45091292 agggaaaacgtaaaatccttctctaattccgtcactaaattttg 45091335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 2275820 - 2275754
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  2275820 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 2275754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 22156743 - 22156677
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  22156743 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 22156677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 33914054 - 33914120
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||| ||||| |||||||| ||||| |||||||||||||||||||    
T  33914054 aaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttg 33914120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 36689696 - 36689738
Alignment:
Q  243 gggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  36689696 gggaaaacgtgaaatccctctctaattccgtcactaaattttg 36689738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 37378765 - 37378699
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  37378765 aaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 37378699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 13028935 - 13028879
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  13028935 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 13028879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 14944764 - 14944820
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  14944764 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 14944820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 13565050 - 13564987
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgac 289  Q
    |||||||||| |||  ||||||||||| |||| | ||||| |||||||||||||||||| ||||    
T  13565050 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgac 13564987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 19839197 - 19839240
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  19839197 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 19839240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 24682467 - 24682403
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||||||   ||||||||||||||||||||| ||||| |||||  ||||||||||||    
T  24682467 aaattagtgagggaaatt--gaaagggaaaacgtgaaatccctctctaattccaccactaaattttg 24682403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 38223512 - 38223571
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||| ||||||||||  |||||| ||||| |||| ||||||||||||||    
T  38223512 tgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttg 38223571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 45532714 - 45532655
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||| |||  ||||||||||| |||||| ||||| ||||||||| |||||||||    
T  45532714 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttg 45532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 4586877 - 4586835
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||    
T  4586877 agggaaaacgtaaaatccctctctaattccgtcactaaatttt 4586835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 8878878 - 8878944
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||| |||||| |||  ||||||||| |||||||| ||||| |||| ||||||||||||||    
T  8878878 aaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttg 8878944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 30269130 - 30269064
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||| || |||||  ||||| |||||||||||||||||||    
T  30269130 aaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttg 30269064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 30283059 - 30283125
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||| || |||||  ||||| |||||||||||||||||||    
T  30283059 aaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttg 30283125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 38619865 - 38619907
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaatttt 284  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||    
T  38619865 agggaaaacgtaaaatccctctctaattccgtcactaaatttt 38619907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 18714910 - 18714963
Alignment:
Q  232 aaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||| ||| |||| ||||||| |||||| ||||| |||||||||||||||||||    
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttg 18714963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 7509 - 7581
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||||| |||  ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  7509 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 7581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 1061 - 995
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  1061 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 995  T

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Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 6121 - 6055
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  ||||||||||| |||||| ||||| ||||| |||||||||||||    
T  6121 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttg 6055  T

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Target: scaffold0219 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 19600 - 19666
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| ||||||| || |||  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  19600 aaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 19666  T

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Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 7453 - 7519
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| |||  |||||||||||||||||| ||||| |||| ||||||||| ||||    
T  7453 aaattaatgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttg 7519  T

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Target: scaffold0087 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 37929 - 37863
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  ||||||||| |||||||| ||||| |||||||||||||||||||    
T  37929 aaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 37863  T

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Target: scaffold0069 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 10155 - 10221
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| ||   ||||||||| |||||||| ||||| |||||||||||||||||||    
T  10155 aaattagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttg 10221  T

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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 15109 - 15053
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||    
T  15109 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 15053  T

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Target: scaffold0076 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 26503 - 26546
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  26503 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 26546  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 39822 - 39779
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||||||||||||||  ||||| |||||||||||||||||||    
T  39822 agggaaaacgtgaaatctctctctaattccgtcactaaattttg 39779  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 22231 - 22274
Alignment:
Q  242 agggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||    
T  22231 agggaaaacgtaaaatccctctctaattccgtcactaaattttg 22274  T

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Target: scaffold0108 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 12650 - 12715
Alignment:
Q  219 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttg 285  Q
    |||||| |||||||||| | |  |||||||||||||| ||| ||||| |||||||||||||||||||    
T  12650 aaattagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttg 12715  T

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Target: scaffold0655 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 3295 - 3225
Alignment:
Q  226 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgtcactaaattttgtgacgaggaaatt 298  Q
    |||||||||| ||||  ||||||||||||||||| || || |||| |||||||||||||| ||| | ||||||    
T  3295 tgagggaaatttaga--gggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatt 3225  T

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