View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5449-Insertion-4 (Length: 113)
Name: NF5449-Insertion-4
Description: NF5449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5449-Insertion-4 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 99; Significance: 2e-49; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-49
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 17232978 - 17233080
Alignment:
| Q |
11 |
cagcctcacgaaacaaaataaaaagctatacatcttaagtcaaagtgaggaaagaattatgaagcacttataagactaggtgtgccgccgtgtccgacac |
110 |
Q |
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| T |
17232978 |
cagcctcacgaaacaaaataaaaagctatacatcttaagtcaaagtgaggaaagaattatgaagcacttacaagactaggtgtgccgccgtgtccgacac |
17233077 |
T |
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| Q |
111 |
tcc |
113 |
Q |
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||| |
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| T |
17233078 |
tcc |
17233080 |
T |
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