View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5450-Insertion-6 (Length: 444)
Name: NF5450-Insertion-6
Description: NF5450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5450-Insertion-6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 8 - 444
Target Start/End: Original strand, 39609636 - 39610072
Alignment:
| Q |
8 |
atttgttcaatatttgtcatagtagaaccaaacagattctgtttcactgtaatatgtttagaactagcatatgcaataatgtcagttgatttttcttgaa |
107 |
Q |
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| T |
39609636 |
atttgttcaatatttgtcatagtagaaccaaacagattctgtttcactgtaatatgtttagaactagcatatgcaataatgtcagttgatttttcttgaa |
39609735 |
T |
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| Q |
108 |
cattttattgaaaatgctaagtttgagtttcaatttattgttttgcagaaactaatttcatgttagtcagagatttaatggagaaaaagcagctaaacct |
207 |
Q |
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| T |
39609736 |
cattttattgaaaatgctaagtttgagtttcaatttattgttttgcagaaactaatttcatgttagtcagagatttaatggaaaaaaagcagctaaacct |
39609835 |
T |
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| Q |
208 |
taaccggccacttttatcagtaaggagagtcacatcaaaaatatcttctgaatcagacaacaaaaggaaaggtactgataatcctcttccttattacaaa |
307 |
Q |
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| T |
39609836 |
taaccggccacttttatcagtaaggagagtcacatcaaaaatagcttctgaatcagacaacaaaaggaaaagtactgataatcctcttccttattacaaa |
39609935 |
T |
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| Q |
308 |
tcagagttaaattcaggtccagttagaaatgccggcactattccttttcaatgggagaaaacaccgggaaaaccgaaagatatatcagttattgaggagg |
407 |
Q |
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| T |
39609936 |
tcagagttaaattcaggtccagttagaaatgccggcgctattccttttcaatgggagaaaacaccgggaaaaccgaaagatatgtcagttattgaggagg |
39610035 |
T |
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| Q |
408 |
gaattggaagcactctttccaatcctcaaaatactgc |
444 |
Q |
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| T |
39610036 |
gaattggaagcactgtttccaatcctcaaaatactgc |
39610072 |
T |
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