View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5450_low_14 (Length: 266)
Name: NF5450_low_14
Description: NF5450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5450_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 43323159 - 43322912
Alignment:
| Q |
1 |
ctatactctaatcaaagctttgatcataactgagctttctaatctaaataatcaatttatcaggatcttttatagttggttttatgcaaagttcggtgtt |
100 |
Q |
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| T |
43323159 |
ctatactctaatcaaagctttgatcataactgagctttctaatctaaataatcaatttatcaggatcttttatagttggttttatgcaaagttcggtgtt |
43323060 |
T |
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| Q |
101 |
aatgttattttttgtaataatttacagtaagttgtttgtatgcaaagttcaatgctaatgttattttttgcaatgatatacagcaagttggtggtaggag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43323059 |
aatgttattttttgtaataatttacagtaagttgtttgtatgcaaagttcaatgctaatgttattttttgcaatgatatacagcaagttggtggtaggag |
43322960 |
T |
|
| Q |
201 |
tgctaaggtaaactttccagaagtgccaaaaggaggtgaaaggttagt |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43322959 |
tgctaaggtaaactttccagaagtgccaaaaggaggtgaaaggttagt |
43322912 |
T |
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