View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5450_low_19 (Length: 243)
Name: NF5450_low_19
Description: NF5450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5450_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 43323308 - 43323549
Alignment:
| Q |
1 |
attgtcatataaaggattgtgacgtgaacataaccattactgcgacaactattaaaagaaagagatatatttgctggatgaatactttaccatccaaaat |
100 |
Q |
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| T |
43323308 |
attgtcatataaaggattgtgacgcgaacataaccattactgcgacaactattaaaagaaagagatatatttgctggatgaatactttaccatccaaaat |
43323407 |
T |
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| Q |
101 |
gatgaaagacacaacaaactaaaattggaatctcaactacttatataaccaacgttgttttgacacgtcacaatagtaaatacttgtgttctatacatat |
200 |
Q |
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| T |
43323408 |
gatgaaagacacaacaaactaaaattggaatctcaactacttatataaccaacattgttttgacaagtcacaatagtaaatacttgtgttctatacatat |
43323507 |
T |
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| Q |
201 |
taagaacaaacagtagcaaaataaaagaccaccctcctatgc |
242 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||| |
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| T |
43323508 |
taagaacaaacagtagaaaaataaaagaccaccctcctatgc |
43323549 |
T |
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