View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5452_high_2 (Length: 383)
Name: NF5452_high_2
Description: NF5452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5452_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 9696141 - 9695905
Alignment:
| Q |
19 |
aaactaagtctgtattaataataaaggtgggatttaagtacagatcatgaagctgaatctacacttaaactatgcgctaatataaacctaaaaactgttt |
118 |
Q |
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| T |
9696141 |
aaactgagtctgtattaataataaaggtgggatttaagtacagatcatgaagctgaatctacacttaaactatgcgctaatataaacctaacaactgttt |
9696042 |
T |
|
| Q |
119 |
gttcatcaaaaaacagctttggatctaaaaagtttcccaattacattccaacctataataatgaaaattattctattgcagttactcctacgcttcttcc |
218 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
9696041 |
gttcatcgcaaaacagctttggatctaaaaagtttcccaattacattccaacctataataatgaaaattattctattgcagttaatcctacgcttcttcc |
9695942 |
T |
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| Q |
219 |
ttcagcaccaccaactttactcctcatcctcctcctg |
255 |
Q |
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||||||||||||||| ||||||||||||||||||||| |
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| T |
9695941 |
ttcagcaccaccaaccttactcctcatcctcctcctg |
9695905 |
T |
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