View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5453-Insertion-8 (Length: 532)
Name: NF5453-Insertion-8
Description: NF5453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5453-Insertion-8 |
 |  |
|
| [»] chr1 (6 HSPs) |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 293 - 532
Target Start/End: Original strand, 48472166 - 48472405
Alignment:
| Q |
293 |
aaaataaatcctttcgatatgtcaatgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaatt |
392 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48472166 |
aaaataaatcctttcgatatgataacgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaatt |
48472265 |
T |
 |
| Q |
393 |
taattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatgaaggttgttgttctgtagnnnnnnnngtt |
492 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
48472266 |
taattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatgaaggttgttgttctgtagttttttttgtt |
48472365 |
T |
 |
| Q |
493 |
tcgttatgactgttagatgaagttatttttggatcaatct |
532 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48472366 |
tcgttatgactgttagatgaagttatttttggatcaatct |
48472405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 8 - 301
Target Start/End: Original strand, 48471566 - 48471862
Alignment:
| Q |
8 |
atatatgctctataacttttggatttgagaagataatgaaattgnnnnnnnnnc------cggtgggggattgggaagaggatgaagatgaagatgatga |
101 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
48471566 |
atatatgctctgtaacttttggatttgagaagataatgaaattgttttttttttttttttcggtgggggattgggaagaggatgaatatgaagatggtga |
48471665 |
T |
 |
| Q |
102 |
gtagaaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaa |
201 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
48471666 |
ctagaaaagatttaggctgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgagaggtt---gaagacaataaaa |
48471762 |
T |
 |
| Q |
202 |
agaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggtttnnnnnnncttttccatgtaaaatgccaccaaaaataaat |
301 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
48471763 |
agaaagatatagtgtggacaatttacagtaagattaatgttccctttcaatccagtggtttaaaaaaactttcccatgtaaaatgccaccaaaaataaat |
48471862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 464
Target Start/End: Complemental strand, 35687588 - 35687416
Alignment:
| Q |
292 |
aaaaataaatcctttcgatatgtcaatgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaat |
391 |
Q |
| |
|
||||| |||||||||||||||||| | ||||| ||||||||||| |||| || |||| |||||||| |||||||| ||||||||| |||| |||| |
|
|
| T |
35687588 |
aaaaagaaatcctttcgatatgtcgaagacattacaaaaggttctgaaaacattaaaatatcattattagatgaaaccaacagtgaggattttccaaaat |
35687489 |
T |
 |
| Q |
392 |
ttaattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatga |
464 |
Q |
| |
|
|||||||||||||| |||| | |||||| ||| ||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
35687488 |
ttaattacattccatgtaacacactgtatcaaagtgcaaatgttaatatttcacttgctcggattgcggatga |
35687416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 3622082 - 3621976
Alignment:
| Q |
153 |
ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat |
252 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||| |||| | |||||||||||||||| ||||| ||| ||| || |||||||||||| ||| |
|
|
| T |
3622082 |
ggtggtgggtctattggtgtctcatgagaggttgaaga---caatgagaagaaagatatagtgtagacagcctatgataaaatcaatgttcccttttaat |
3621986 |
T |
 |
| Q |
253 |
ctagtggttt |
262 |
Q |
| |
|
||| |||||| |
|
|
| T |
3621985 |
ctaatggttt |
3621976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 48470997 - 48470943
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
||||||||| |||||| ||| |||||||||||||||| ||| ||||||||||||| |
|
|
| T |
48470997 |
atatagtgtagacagtctatggtaagattaatgttccattttaatctagtggttt |
48470943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 3622591 - 3622644
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||| ||||| |||||| |||||| |
|
|
| T |
3622591 |
atatagtgtggacagtctatagtaagatcaatgtt-ccttttaatctaatggttt |
3622644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 137; Significance: 3e-71; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 88 - 262
Target Start/End: Original strand, 31111224 - 31111395
Alignment:
| Q |
88 |
gatgaagatgatgagtagaaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttga |
187 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
31111224 |
gatgaagatgatgagcagaaaagatttaggctgaaatcaatggtttaggggtggttcttggaatcggtggtgggtctattggtggttcatgagaggtt-- |
31111321 |
T |
 |
| Q |
188 |
agaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31111322 |
-gaagacaataaaaagaaagatatagtgtggacagttgatagtaagattaatgttccctttcaatctagtggttt |
31111395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 31111144 - 31111187
Alignment:
| Q |
8 |
atatatgctctataacttttggatttgagaagataatgaaattg |
51 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
31111144 |
atatatgctctttaacttttggatttgagaagataatgaaattg |
31111187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 2458293 - 2458347
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
2458293 |
atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt |
2458347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 2457804 - 2457698
Alignment:
| Q |
153 |
ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat |
252 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||| |||| | ||||||||||||||| |||||| ||| ||| || |||||||||||| ||| |
|
|
| T |
2457804 |
ggtggtgggtctattggtgtctcatgagaggttgaaga---caatgagaagaaagatatagtgcggacagcctatgataaaatcaatgttcccttttaat |
2457708 |
T |
 |
| Q |
253 |
ctagtggttt |
262 |
Q |
| |
|
|| |||||| |
|
|
| T |
2457707 |
ttaatggttt |
2457698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 31110595 - 31110541
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
||||| ||| |||||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
31110595 |
atataatgtagacagtctatggtaagattaatgttcccttttaatctagtggttt |
31110541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 53145234 - 53145475
Alignment:
| Q |
8 |
atatatgctctataacttttggatttgagaagataatgaaattgnnnnnnnnncc--ggtgggggattgggaagaggatgaagatgaagatgatgagtag |
105 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
53145234 |
atatatgctctttaacttttggatttgagaagataatgaaattgttttttttttttgggtgggggattgggaagaggatg------aagatgatgagcag |
53145327 |
T |
 |
| Q |
106 |
aaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaa |
205 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
53145328 |
aaaagatttaggctgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtggttcatg---------agaagacaataaaaagaa |
53145418 |
T |
 |
| Q |
206 |
agatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53145419 |
agatatagtgtggatagtttatagtaagattaatgttccctttcaatctagtggttt |
53145475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 37104513 - 37104407
Alignment:
| Q |
153 |
ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat |
252 |
Q |
| |
|
||||||||||||||||||| |||||| ||||| ||||||||| | ||||||||||||||||||||| ||| ||| || |||||||||||| ||| |
|
|
| T |
37104513 |
ggtggtgggtctattggtgtctcatgagaggtt---gaagacaatgagaagaaagatatagtgtggacaacctatgataaaatcaatgttcccttttaat |
37104417 |
T |
 |
| Q |
253 |
ctagtggttt |
262 |
Q |
| |
|
||| |||||| |
|
|
| T |
37104416 |
ctaatggttt |
37104407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 21811988 - 21811934
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
21811988 |
atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt |
21811934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 37105016 - 37105070
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
37105016 |
atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt |
37105070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 53144675 - 53144621
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
||||||||| |||||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
53144675 |
atatagtgtagacagtctatggtaagattaatgttcccttttaatctagtggttt |
53144621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 21812434 - 21812553
Alignment:
| Q |
106 |
aaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggt------ggtgggtctattggtgcttcatgaaaggttgaagaagacaataa |
199 |
Q |
| |
|
|||||||||||| |||||||||| ||||| ||||| ||||||| ||||| |||||||||||||||| |||||| ||||| ||||||||| | |
|
|
| T |
21812434 |
aaaagatttaggctgaaatcaattgtttaatggtggttcttggagtcggttttggtggtgggtctattggtgtctcatgagaggtt---gaagacaatga |
21812530 |
T |
 |
| Q |
200 |
aaagaaagatatagtgtggacag |
222 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
21812531 |
gaagaaagatatagtatggacag |
21812553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 8 - 262
Target Start/End: Complemental strand, 55011141 - 55010898
Alignment:
| Q |
8 |
atatatgctctataacttttggatttgagaagataatgaaattgnnnnnnnnncc----ggtgggggattgggaagaggatgaagatgaagatgatgagt |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
55011141 |
atatatgctctttaacttttggatttgagaagataatgaaattgttttttttttttttgggtgggggattgggaagaggatgaagatga------tgagc |
55011048 |
T |
 |
| Q |
104 |
agaaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaag |
203 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
55011047 |
agaaaagatttaggctgaaatcaatggtttagggttgactcttggaatcggtggtgggtctattggtggttcatg---------agaagacaataaaaag |
55010957 |
T |
 |
| Q |
204 |
aaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55010956 |
aaagatatagtgtggatagtttatagtaagattaatgttccctttcaatctagtggttt |
55010898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 37275700 - 37275806
Alignment:
| Q |
153 |
ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat |
252 |
Q |
| |
|
||||||||||||||||||| | |||| |||||||||| |||| | |||||||||||||| |||||||| ||| ||| || |||||||||||| ||| |
|
|
| T |
37275700 |
ggtggtgggtctattggtgtcttatgagaggttgaaga---caatgagaagaaagatatagtatggacagtctatgataaaatcaatgttcccttttaat |
37275796 |
T |
 |
| Q |
253 |
ctagtggttt |
262 |
Q |
| |
|
||| |||||| |
|
|
| T |
37275797 |
ctaatggttt |
37275806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 37275197 - 37275143
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
37275197 |
atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt |
37275143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 55011687 - 55011741
Alignment:
| Q |
208 |
atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
||||||| | |||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
55011687 |
atatagtatagacagtctatagtaagattaatgttcccttttaatctagtggttt |
55011741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 198944 - 198999
Alignment:
| Q |
201 |
aagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctag |
256 |
Q |
| |
|
||||||||||||||||||| || ||||||||| || |||||||||| || |||||| |
|
|
| T |
198944 |
aagaaagatatagtgtggatagcttatagtaaaatcaatgttccctatccatctag |
198999 |
T |
 |
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Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 464
Target Start/End: Original strand, 44972017 - 44972192
Alignment:
| Q |
292 |
aaaaataaatcctttcgatatgtcaatgacataacaaaaggttc---ataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttccta |
388 |
Q |
| |
|
||||| |||||||||||||||||| | ||||||||||||||||| | |||| || |||| |||||||| || ||||| ||||||||| |||| | |
|
|
| T |
44972017 |
aaaaaaaaatcctttcgatatgtcgaagacataacaaaaggttctgaaaaaaacattaaaatatcattattagaggaaaccaacagtgaggattttccaa |
44972116 |
T |
 |
| Q |
389 |
aatttaattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatga |
464 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||| ||||| ||||||||||||||||| ||| ||||||| |
|
|
| T |
44972117 |
aatttaattatattccatgtaacacaatgtatcaaagtgcaaatgttaatatttcacttgctcggattacggatga |
44972192 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 32666742 - 32666698
Alignment:
| Q |
218 |
gacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
32666742 |
gacagtctatggtaagattaatgttcccttttaatctagtggttt |
32666698 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 32666845 - 32666804
Alignment:
| Q |
108 |
aagatttagggtgaaatcaatggtttaggggtggctcttgga |
149 |
Q |
| |
|
|||||||||| |||||||| | |||||||||||||||||||| |
|
|
| T |
32666845 |
aagatttaggctgaaatcatttgtttaggggtggctcttgga |
32666804 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 464
Target Start/End: Complemental strand, 7724292 - 7724120
Alignment:
| Q |
292 |
aaaaataaatcctttcgatatgtcaatgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaat |
391 |
Q |
| |
|
||||| ||||| ||| |||||||| | ||||||||||||||||| |||| || |||| |||||||| || ||||| ||||||||| ||| |||| |
|
|
| T |
7724292 |
aaaaagaaatcattttgatatgtcgaagacataacaaaaggttcggaaaacattaaaatatcattattagacgaaaccaacagtgaggatattctaaaat |
7724193 |
T |
 |
| Q |
392 |
ttaattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatga |
464 |
Q |
| |
|
|||||||||||||| |||| || |||||| ||| ||||| ||||||||||||||||| |||| |||||| |
|
|
| T |
7724192 |
ttaattacattccatgtaaaacaatgtatcaaagtgcaaatgttaatatttcacttgctcggattgtggatga |
7724120 |
T |
 |
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Target: chr2 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 2650357 - 2650284
Alignment:
| Q |
189 |
gaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt |
262 |
Q |
| |
|
||||||||| | ||||||||||||||||||| || ||| ||| ||||||||||||||| |||||| |||||| |
|
|
| T |
2650357 |
gaagacaatgagaagaaagatatagtgtggatagcctatgataaaattaatgttcccttttaatctaatggttt |
2650284 |
T |
 |
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