View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5453-Insertion-8 (Length: 532)

Name: NF5453-Insertion-8
Description: NF5453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5453-Insertion-8
NF5453-Insertion-8
[»] chr1 (6 HSPs)
chr1 (293-532)||(48472166-48472405)
chr1 (8-301)||(48471566-48471862)
chr1 (292-464)||(35687416-35687588)
chr1 (153-262)||(3621976-3622082)
chr1 (208-262)||(48470943-48470997)
chr1 (208-262)||(3622591-3622644)
[»] chr5 (5 HSPs)
chr5 (88-262)||(31111224-31111395)
chr5 (8-51)||(31111144-31111187)
chr5 (208-262)||(2458293-2458347)
chr5 (153-262)||(2457698-2457804)
chr5 (208-262)||(31110541-31110595)
[»] chr3 (6 HSPs)
chr3 (8-262)||(53145234-53145475)
chr3 (153-262)||(37104407-37104513)
chr3 (208-262)||(21811934-21811988)
chr3 (208-262)||(37105016-37105070)
chr3 (208-262)||(53144621-53144675)
chr3 (106-222)||(21812434-21812553)
[»] chr4 (5 HSPs)
chr4 (8-262)||(55010898-55011141)
chr4 (153-262)||(37275700-37275806)
chr4 (208-262)||(37275143-37275197)
chr4 (208-262)||(55011687-55011741)
chr4 (201-256)||(198944-198999)
[»] chr8 (3 HSPs)
chr8 (292-464)||(44972017-44972192)
chr8 (218-262)||(32666698-32666742)
chr8 (108-149)||(32666804-32666845)
[»] chr6 (1 HSPs)
chr6 (292-464)||(7724120-7724292)
[»] chr2 (1 HSPs)
chr2 (189-262)||(2650284-2650357)


Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 293 - 532
Target Start/End: Original strand, 48472166 - 48472405
Alignment:
293 aaaataaatcctttcgatatgtcaatgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaatt 392  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
48472166 aaaataaatcctttcgatatgataacgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaatt 48472265  T
393 taattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatgaaggttgttgttctgtagnnnnnnnngtt 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||    
48472266 taattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatgaaggttgttgttctgtagttttttttgtt 48472365  T
493 tcgttatgactgttagatgaagttatttttggatcaatct 532  Q
    ||||||||||||||||||||||||||||||||||||||||    
48472366 tcgttatgactgttagatgaagttatttttggatcaatct 48472405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 8 - 301
Target Start/End: Original strand, 48471566 - 48471862
Alignment:
8 atatatgctctataacttttggatttgagaagataatgaaattgnnnnnnnnnc------cggtgggggattgggaagaggatgaagatgaagatgatga 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||| ||||||||| |||    
48471566 atatatgctctgtaacttttggatttgagaagataatgaaattgttttttttttttttttcggtgggggattgggaagaggatgaatatgaagatggtga 48471665  T
102 gtagaaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaa 201  Q
     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||    
48471666 ctagaaaagatttaggctgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgagaggtt---gaagacaataaaa 48471762  T
202 agaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggtttnnnnnnncttttccatgtaaaatgccaccaaaaataaat 301  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||       |||| |||||||||||||||||||||||||||    
48471763 agaaagatatagtgtggacaatttacagtaagattaatgttccctttcaatccagtggtttaaaaaaactttcccatgtaaaatgccaccaaaaataaat 48471862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 464
Target Start/End: Complemental strand, 35687588 - 35687416
Alignment:
292 aaaaataaatcctttcgatatgtcaatgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaat 391  Q
    ||||| |||||||||||||||||| | ||||| |||||||||||  ||||  || |||| |||||||| ||||||||    ||||||||| |||| ||||    
35687588 aaaaagaaatcctttcgatatgtcgaagacattacaaaaggttctgaaaacattaaaatatcattattagatgaaaccaacagtgaggattttccaaaat 35687489  T
392 ttaattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatga 464  Q
    |||||||||||||| ||||     |  |||||| ||| ||||| ||||||||||||||||| |||||||||||    
35687488 ttaattacattccatgtaacacactgtatcaaagtgcaaatgttaatatttcacttgctcggattgcggatga 35687416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 3622082 - 3621976
Alignment:
153 ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat 252  Q
    |||||||||||||||||||  |||||| ||||||||||   |||| | |||||||||||||||| |||||  |||  ||| || |||||||||||| |||    
3622082 ggtggtgggtctattggtgtctcatgagaggttgaaga---caatgagaagaaagatatagtgtagacagcctatgataaaatcaatgttcccttttaat 3621986  T
253 ctagtggttt 262  Q
    ||| ||||||    
3621985 ctaatggttt 3621976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 48470997 - 48470943
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    ||||||||| |||||| ||| |||||||||||||||| ||| |||||||||||||    
48470997 atatagtgtagacagtctatggtaagattaatgttccattttaatctagtggttt 48470943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 3622591 - 3622644
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
3622591 atatagtgtggacagtctatagtaagatcaatgtt-ccttttaatctaatggttt 3622644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 3e-71; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 88 - 262
Target Start/End: Original strand, 31111224 - 31111395
Alignment:
88 gatgaagatgatgagtagaaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttga 187  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||      
31111224 gatgaagatgatgagcagaaaagatttaggctgaaatcaatggtttaggggtggttcttggaatcggtggtgggtctattggtggttcatgagaggtt-- 31111321  T
188 agaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
31111322 -gaagacaataaaaagaaagatatagtgtggacagttgatagtaagattaatgttccctttcaatctagtggttt 31111395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 31111144 - 31111187
Alignment:
8 atatatgctctataacttttggatttgagaagataatgaaattg 51  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
31111144 atatatgctctttaacttttggatttgagaagataatgaaattg 31111187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 2458293 - 2458347
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||    
2458293 atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt 2458347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 2457804 - 2457698
Alignment:
153 ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat 252  Q
    |||||||||||||||||||  |||||| ||||||||||   |||| | ||||||||||||||| ||||||  |||  ||| || |||||||||||| |||    
2457804 ggtggtgggtctattggtgtctcatgagaggttgaaga---caatgagaagaaagatatagtgcggacagcctatgataaaatcaatgttcccttttaat 2457708  T
253 ctagtggttt 262  Q
     || ||||||    
2457707 ttaatggttt 2457698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 31110595 - 31110541
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    ||||| ||| |||||| ||| |||||||||||||||||||| |||||||||||||    
31110595 atataatgtagacagtctatggtaagattaatgttcccttttaatctagtggttt 31110541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 53145234 - 53145475
Alignment:
8 atatatgctctataacttttggatttgagaagataatgaaattgnnnnnnnnncc--ggtgggggattgggaagaggatgaagatgaagatgatgagtag 105  Q
    ||||||||||| ||||||||||||||||||||||||||||||||             |||||||||||||||||||||||      ||||||||||| ||    
53145234 atatatgctctttaacttttggatttgagaagataatgaaattgttttttttttttgggtgggggattgggaagaggatg------aagatgatgagcag 53145327  T
106 aaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaa 205  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||    
53145328 aaaagatttaggctgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtggttcatg---------agaagacaataaaaagaa 53145418  T
206 agatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
53145419 agatatagtgtggatagtttatagtaagattaatgttccctttcaatctagtggttt 53145475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 37104513 - 37104407
Alignment:
153 ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat 252  Q
    |||||||||||||||||||  |||||| |||||   ||||||||| | |||||||||||||||||||||   |||  ||| || |||||||||||| |||    
37104513 ggtggtgggtctattggtgtctcatgagaggtt---gaagacaatgagaagaaagatatagtgtggacaacctatgataaaatcaatgttcccttttaat 37104417  T
253 ctagtggttt 262  Q
    ||| ||||||    
37104416 ctaatggttt 37104407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 21811988 - 21811934
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||    
21811988 atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt 21811934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 37105016 - 37105070
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||    
37105016 atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt 37105070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 53144675 - 53144621
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    ||||||||| |||||| ||| |||||||||||||||||||| |||||||||||||    
53144675 atatagtgtagacagtctatggtaagattaatgttcccttttaatctagtggttt 53144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 21812434 - 21812553
Alignment:
106 aaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggt------ggtgggtctattggtgcttcatgaaaggttgaagaagacaataa 199  Q
    |||||||||||| |||||||||| |||||  ||||| ||||||| |||||      ||||||||||||||||  |||||| |||||   ||||||||| |    
21812434 aaaagatttaggctgaaatcaattgtttaatggtggttcttggagtcggttttggtggtgggtctattggtgtctcatgagaggtt---gaagacaatga 21812530  T
200 aaagaaagatatagtgtggacag 222  Q
     |||||||||||||| |||||||    
21812531 gaagaaagatatagtatggacag 21812553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 8 - 262
Target Start/End: Complemental strand, 55011141 - 55010898
Alignment:
8 atatatgctctataacttttggatttgagaagataatgaaattgnnnnnnnnncc----ggtgggggattgggaagaggatgaagatgaagatgatgagt 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||      ||||     
55011141 atatatgctctttaacttttggatttgagaagataatgaaattgttttttttttttttgggtgggggattgggaagaggatgaagatga------tgagc 55011048  T
104 agaaaagatttagggtgaaatcaatggtttaggggtggctcttggaatcggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaag 203  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||         ||||||||||||||||    
55011047 agaaaagatttaggctgaaatcaatggtttagggttgactcttggaatcggtggtgggtctattggtggttcatg---------agaagacaataaaaag 55010957  T
204 aaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
55010956 aaagatatagtgtggatagtttatagtaagattaatgttccctttcaatctagtggttt 55010898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 37275700 - 37275806
Alignment:
153 ggtggtgggtctattggtgcttcatgaaaggttgaagaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaat 252  Q
    |||||||||||||||||||  | |||| ||||||||||   |||| | |||||||||||||| |||||||| |||  ||| || |||||||||||| |||    
37275700 ggtggtgggtctattggtgtcttatgagaggttgaaga---caatgagaagaaagatatagtatggacagtctatgataaaatcaatgttcccttttaat 37275796  T
253 ctagtggttt 262  Q
    ||| ||||||    
37275797 ctaatggttt 37275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 37275197 - 37275143
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||    
37275197 atatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt 37275143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 55011687 - 55011741
Alignment:
208 atatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    ||||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
55011687 atatagtatagacagtctatagtaagattaatgttcccttttaatctagtggttt 55011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 198944 - 198999
Alignment:
201 aagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctag 256  Q
    ||||||||||||||||||| || ||||||||| || |||||||||| || ||||||    
198944 aagaaagatatagtgtggatagcttatagtaaaatcaatgttccctatccatctag 198999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 464
Target Start/End: Original strand, 44972017 - 44972192
Alignment:
292 aaaaataaatcctttcgatatgtcaatgacataacaaaaggttc---ataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttccta 388  Q
    ||||| |||||||||||||||||| | |||||||||||||||||   | ||||  || |||| |||||||| || |||||    ||||||||| |||| |    
44972017 aaaaaaaaatcctttcgatatgtcgaagacataacaaaaggttctgaaaaaaacattaaaatatcattattagaggaaaccaacagtgaggattttccaa 44972116  T
389 aatttaattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatga 464  Q
    |||||||||| |||||| ||||    ||  |||||| ||| ||||| ||||||||||||||||| ||| |||||||    
44972117 aatttaattatattccatgtaacacaatgtatcaaagtgcaaatgttaatatttcacttgctcggattacggatga 44972192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 32666742 - 32666698
Alignment:
218 gacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    |||||| ||| |||||||||||||||||||| |||||||||||||    
32666742 gacagtctatggtaagattaatgttcccttttaatctagtggttt 32666698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 32666845 - 32666804
Alignment:
108 aagatttagggtgaaatcaatggtttaggggtggctcttgga 149  Q
    |||||||||| |||||||| | ||||||||||||||||||||    
32666845 aagatttaggctgaaatcatttgtttaggggtggctcttgga 32666804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 464
Target Start/End: Complemental strand, 7724292 - 7724120
Alignment:
292 aaaaataaatcctttcgatatgtcaatgacataacaaaaggttcataaaatgttgaaatctcattatttgatgaaactggaagtgaggatcttcctaaat 391  Q
    ||||| ||||| ||| |||||||| | |||||||||||||||||  ||||  || |||| |||||||| || |||||    ||||||||| |||  ||||    
7724292 aaaaagaaatcattttgatatgtcgaagacataacaaaaggttcggaaaacattaaaatatcattattagacgaaaccaacagtgaggatattctaaaat 7724193  T
392 ttaattacattccaagtaatttgatacatcaaaatgctaatgtcaatatttcacttgctcgaattgcggatga 464  Q
    |||||||||||||| ||||    ||  |||||| ||| ||||| ||||||||||||||||| |||| ||||||    
7724192 ttaattacattccatgtaaaacaatgtatcaaagtgcaaatgttaatatttcacttgctcggattgtggatga 7724120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 2650357 - 2650284
Alignment:
189 gaagacaataaaaagaaagatatagtgtggacagtttatagtaagattaatgttccctttcaatctagtggttt 262  Q
    ||||||||| | ||||||||||||||||||| ||  |||  ||| ||||||||||||||| |||||| ||||||    
2650357 gaagacaatgagaagaaagatatagtgtggatagcctatgataaaattaatgttcccttttaatctaatggttt 2650284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University