View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5456-Insertion-1 (Length: 675)

Name: NF5456-Insertion-1
Description: NF5456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5456-Insertion-1
NF5456-Insertion-1
[»] chr2 (64 HSPs)
chr2 (8-385)||(43535391-43535768)
chr2 (389-675)||(13017781-13018065)
chr2 (384-675)||(17905651-17905930)
chr2 (389-675)||(7227796-7228083)
chr2 (390-675)||(28740599-28740884)
chr2 (395-675)||(30698289-30698568)
chr2 (413-675)||(7167452-7167714)
chr2 (389-646)||(1583620-1583880)
chr2 (429-647)||(8736252-8736472)
chr2 (389-675)||(39630227-39630512)
chr2 (379-675)||(33189051-33189338)
chr2 (389-675)||(11141307-11141592)
chr2 (389-675)||(45094257-45094542)
chr2 (389-675)||(35047464-35047750)
chr2 (389-647)||(769038-769289)
chr2 (461-652)||(6749233-6749424)
chr2 (425-646)||(12263464-12263688)
chr2 (434-675)||(7611682-7611914)
chr2 (449-643)||(32840007-32840201)
chr2 (462-675)||(44255711-44255922)
chr2 (393-675)||(11606719-11607002)
chr2 (425-612)||(1730091-1730280)
chr2 (383-675)||(3092278-3092563)
chr2 (429-647)||(20935748-20935967)
chr2 (419-580)||(7309640-7309804)
chr2 (392-595)||(740709-740915)
chr2 (456-647)||(14306625-14306809)
chr2 (462-622)||(41585526-41585686)
chr2 (414-594)||(32839511-32839694)
chr2 (429-646)||(21504492-21504710)
chr2 (419-642)||(11594840-11595066)
chr2 (382-612)||(2274634-2274866)
chr2 (474-580)||(28021981-28022088)
chr2 (453-611)||(44205503-44205663)
chr2 (383-554)||(11036338-11036512)
chr2 (545-611)||(11037169-11037235)
chr2 (454-573)||(36272365-36272482)
chr2 (389-444)||(27033492-27033547)
chr2 (502-559)||(11595406-11595464)
chr2 (492-573)||(31613921-31614003)
chr2 (502-558)||(11607308-11607365)
chr2 (387-472)||(11793895-11793982)
chr2 (384-472)||(10480116-10480206)
chr2 (389-444)||(14365702-14365757)
chr2 (389-444)||(41461617-41461672)
chr2 (486-547)||(2924825-2924887)
chr2 (389-472)||(11532239-11532324)
chr2 (383-441)||(41461511-41461569)
chr2 (391-444)||(11684603-11684656)
chr2 (389-444)||(14365801-14365856)
chr2 (389-444)||(14537201-14537256)
chr2 (389-444)||(17180299-17180354)
chr2 (499-549)||(42941047-42941098)
chr2 (492-562)||(2701871-2701941)
chr2 (492-556)||(767280-767345)
chr2 (395-444)||(11716501-11716550)
chr2 (511-559)||(14404911-14404958)
chr2 (389-444)||(784895-784950)
chr2 (389-444)||(11716410-11716465)
chr2 (389-444)||(14954268-14954323)
chr2 (384-422)||(11595334-11595372)
chr2 (384-441)||(784790-784847)
chr2 (385-422)||(11607237-11607274)
chr2 (376-417)||(44205683-44205724)
[»] chr6 (30 HSPs)
chr6 (389-675)||(1368479-1368762)
chr6 (384-612)||(28918162-28918392)
chr6 (449-647)||(1195397-1195595)
chr6 (456-622)||(31412972-31413138)
chr6 (462-647)||(6358062-6358247)
chr6 (456-638)||(8475232-8475414)
chr6 (414-622)||(9697489-9697699)
chr6 (464-647)||(10105118-10105300)
chr6 (420-612)||(26901609-26901804)
chr6 (456-611)||(29395365-29395521)
chr6 (449-547)||(15616271-15616370)
chr6 (391-495)||(15832470-15832576)
chr6 (516-580)||(29901953-29902017)
chr6 (384-444)||(8574767-8574827)
chr6 (389-444)||(8574697-8574752)
chr6 (389-472)||(34244966-34245051)
chr6 (387-444)||(9763012-9763069)
chr6 (389-444)||(9285649-9285704)
chr6 (389-472)||(13487277-13487362)
chr6 (384-444)||(6919809-6919869)
chr6 (451-509)||(10737668-10737726)
chr6 (389-447)||(29889447-29889505)
chr6 (449-518)||(413614-413683)
chr6 (384-444)||(776182-776242)
chr6 (388-444)||(6919709-6919765)
chr6 (389-444)||(776082-776137)
chr6 (530-573)||(18596166-18596209)
chr6 (389-427)||(33733434-33733472)
chr6 (391-444)||(15299527-15299579)
chr6 (488-546)||(15832760-15832820)
[»] chr5 (77 HSPs)
chr5 (389-675)||(22303652-22303938)
chr5 (384-675)||(10314646-10314937)
chr5 (391-647)||(9894130-9894388)
chr5 (383-675)||(927298-927588)
chr5 (429-675)||(33146215-33146461)
chr5 (384-675)||(41762006-41762288)
chr5 (429-643)||(17542173-17542389)
chr5 (425-675)||(28489501-28489750)
chr5 (389-646)||(32249907-32250165)
chr5 (389-638)||(35379346-35379595)
chr5 (456-622)||(34105142-34105308)
chr5 (434-647)||(6772021-6772234)
chr5 (449-675)||(12479971-12480188)
chr5 (462-647)||(8264585-8264770)
chr5 (473-622)||(40089650-40089799)
chr5 (462-673)||(35111303-35111512)
chr5 (429-622)||(15270687-15270882)
chr5 (456-635)||(17492985-17493164)
chr5 (389-542)||(14834826-14834982)
chr5 (516-622)||(22768199-22768304)
chr5 (528-642)||(28490109-28490222)
chr5 (449-547)||(37241018-37241116)
chr5 (456-644)||(8674289-8674475)
chr5 (451-573)||(11409247-11409370)
chr5 (464-554)||(30519082-30519173)
chr5 (464-554)||(30559422-30559513)
chr5 (389-508)||(22766954-22767075)
chr5 (463-546)||(37241506-37241590)
chr5 (477-648)||(6955291-6955463)
chr5 (436-573)||(11601088-11601226)
chr5 (563-675)||(22304999-22305108)
chr5 (567-675)||(22302654-22302759)
chr5 (382-480)||(40090389-40090489)
chr5 (429-508)||(17492595-17492676)
chr5 (449-534)||(22305158-22305244)
chr5 (377-472)||(25935273-25935370)
chr5 (429-508)||(28490034-28490115)
chr5 (387-472)||(19533890-19533977)
chr5 (384-444)||(40809338-40809398)
chr5 (389-444)||(2316380-2316435)
chr5 (385-444)||(2721573-2721632)
chr5 (529-580)||(8255117-8255168)
chr5 (434-547)||(17444337-17444452)
chr5 (389-444)||(20523235-20523290)
chr5 (387-441)||(15804399-15804453)
chr5 (456-518)||(22302593-22302655)
chr5 (466-547)||(31316242-31316324)
chr5 (389-472)||(37722877-37722962)
chr5 (492-612)||(37090722-37090843)
chr5 (384-444)||(40643919-40643979)
chr5 (389-444)||(15374062-15374117)
chr5 (389-472)||(37145484-37145569)
chr5 (389-443)||(40809444-40809498)
chr5 (492-580)||(21541445-21541534)
chr5 (389-442)||(28828369-28828422)
chr5 (387-444)||(28828449-28828506)
chr5 (563-647)||(9893987-9894070)
chr5 (389-444)||(3563279-3563334)
chr5 (389-444)||(9764440-9764495)
chr5 (389-444)||(15804324-15804379)
chr5 (389-444)||(20523135-20523190)
chr5 (389-444)||(26281282-26281337)
chr5 (389-444)||(32389974-32390029)
chr5 (562-633)||(37240960-37241030)
chr5 (389-447)||(20320658-20320716)
chr5 (420-480)||(8255060-8255121)
chr5 (486-546)||(9894060-9894121)
chr5 (384-432)||(5658773-5658821)
chr5 (384-444)||(9764335-9764395)
chr5 (523-647)||(24402599-24402724)
chr5 (384-444)||(32470879-32470939)
chr5 (454-580)||(41150206-41150334)
chr5 (389-444)||(23092064-23092119)
chr5 (552-622)||(33995712-33995781)
chr5 (383-444)||(6634011-6634072)
chr5 (383-444)||(16515120-16515181)
chr5 (384-444)||(34982213-34982272)
[»] chr7 (64 HSPs)
chr7 (383-675)||(14603033-14603325)
chr7 (389-675)||(35455806-35456092)
chr7 (389-675)||(22391361-22391644)
chr7 (429-675)||(13814765-13815011)
chr7 (389-675)||(28538939-28539225)
chr7 (462-675)||(40495307-40495517)
chr7 (391-675)||(30629061-30629346)
chr7 (389-675)||(39342422-39342699)
chr7 (389-675)||(23548382-23548668)
chr7 (429-646)||(14790155-14790374)
chr7 (389-645)||(30524257-30524515)
chr7 (449-631)||(26416017-26416199)
chr7 (429-675)||(40495759-40496005)
chr7 (456-675)||(40667412-40667625)
chr7 (456-622)||(30587725-30587891)
chr7 (389-647)||(25189022-25189283)
chr7 (466-675)||(41442866-41443078)
chr7 (449-647)||(19865349-19865549)
chr7 (389-554)||(9784820-9784988)
chr7 (391-546)||(23455144-23455302)
chr7 (451-580)||(30080664-30080794)
chr7 (407-604)||(3905498-3905698)
chr7 (392-547)||(43791097-43791253)
chr7 (451-643)||(45967013-45967205)
chr7 (429-645)||(45984382-45984604)
chr7 (429-645)||(45988742-45988964)
chr7 (466-574)||(36328664-36328774)
chr7 (391-637)||(15990895-15991141)
chr7 (429-546)||(32650615-32650735)
chr7 (463-595)||(33310882-33311015)
chr7 (456-595)||(18926674-18926809)
chr7 (456-547)||(42816620-42816712)
chr7 (487-612)||(18938843-18938969)
chr7 (458-622)||(23695979-23696143)
chr7 (537-675)||(2411465-2411600)
chr7 (389-501)||(18789189-18789303)
chr7 (379-469)||(31632714-31632806)
chr7 (536-644)||(46700356-46700463)
chr7 (389-472)||(26162109-26162194)
chr7 (527-580)||(34114486-34114539)
chr7 (387-444)||(43955616-43955673)
chr7 (384-444)||(2057392-2057452)
chr7 (525-573)||(5976451-5976499)
chr7 (384-444)||(40110840-40110900)
chr7 (384-444)||(43955514-43955574)
chr7 (389-444)||(40110739-40110794)
chr7 (389-447)||(6498764-6498822)
chr7 (414-501)||(18789544-18789633)
chr7 (384-437)||(40854079-40854132)
chr7 (563-675)||(42816701-42816810)
chr7 (383-447)||(35776954-35777018)
chr7 (462-601)||(37460749-37460889)
chr7 (383-444)||(5644673-5644734)
chr7 (565-622)||(32650727-32650783)
chr7 (568-675)||(9784716-9784820)
chr7 (393-441)||(21635990-21636038)
chr7 (389-444)||(34398950-34399006)
chr7 (389-444)||(2057497-2057552)
chr7 (389-444)||(5644779-5644834)
chr7 (389-444)||(29065821-29065876)
chr7 (389-444)||(34388367-34388422)
chr7 (388-422)||(36328804-36328838)
chr7 (494-574)||(34037765-34037845)
chr7 (452-512)||(9886955-9887015)
[»] chr3 (66 HSPs)
chr3 (384-675)||(42005737-42006028)
chr3 (389-675)||(37054396-37054681)
chr3 (389-675)||(36397773-36398059)
chr3 (407-675)||(7976568-7976836)
chr3 (384-675)||(34088568-34088859)
chr3 (389-621)||(47767434-47767668)
chr3 (382-638)||(53129662-53129920)
chr3 (389-675)||(53470212-53470499)
chr3 (462-675)||(2104811-2105021)
chr3 (459-647)||(6836869-6837057)
chr3 (389-638)||(48947607-48947858)
chr3 (407-675)||(30766573-30766841)
chr3 (390-675)||(52527039-52527325)
chr3 (389-603)||(7302348-7302565)
chr3 (463-674)||(26547093-26547293)
chr3 (384-573)||(21307415-21307607)
chr3 (456-647)||(43863761-43863952)
chr3 (388-611)||(34396355-34396579)
chr3 (383-646)||(21730898-21731163)
chr3 (429-580)||(38506752-38506906)
chr3 (382-573)||(671502-671696)
chr3 (462-622)||(31021756-31021917)
chr3 (449-580)||(46706716-46706848)
chr3 (516-647)||(30767426-30767557)
chr3 (487-612)||(28182090-28182215)
chr3 (391-580)||(47336885-47337077)
chr3 (456-547)||(35279831-35279923)
chr3 (466-601)||(46635927-46636063)
chr3 (475-574)||(1146827-1146926)
chr3 (486-580)||(36635983-36636078)
chr3 (494-595)||(15760343-15760445)
chr3 (456-630)||(55460411-55460581)
chr3 (463-547)||(26323434-26323519)
chr3 (387-646)||(44288278-44288531)
chr3 (425-546)||(47284113-47284237)
chr3 (389-518)||(30767106-30767238)
chr3 (474-561)||(48825022-48825110)
chr3 (389-580)||(31189273-31189467)
chr3 (456-558)||(1796128-1796231)
chr3 (457-580)||(32665956-32666081)
chr3 (451-579)||(40493135-40493264)
chr3 (612-675)||(7302618-7302679)
chr3 (612-675)||(21307342-21307403)
chr3 (384-444)||(49457340-49457400)
chr3 (389-444)||(46672818-46672873)
chr3 (492-580)||(20634315-20634404)
chr3 (384-444)||(27251996-27252056)
chr3 (384-444)||(44436255-44436315)
chr3 (384-444)||(44692924-44692984)
chr3 (389-444)||(9129446-9129501)
chr3 (389-444)||(9137553-9137608)
chr3 (563-622)||(35279784-35279842)
chr3 (389-444)||(44692824-44692879)
chr3 (407-530)||(50168536-50168662)
chr3 (586-674)||(24241975-24242058)
chr3 (380-444)||(39110387-39110451)
chr3 (389-444)||(5415785-5415840)
chr3 (516-551)||(43526681-43526716)
chr3 (389-447)||(46635859-46635917)
chr3 (389-422)||(25655317-25655350)
chr3 (383-416)||(25655409-25655442)
chr3 (395-444)||(31070415-31070463)
chr3 (391-432)||(35279929-35279970)
chr3 (389-417)||(2732641-2732669)
chr3 (395-472)||(19475824-19475903)
chr3 (384-444)||(42130689-42130749)
[»] chr1 (65 HSPs)
chr1 (390-666)||(37036743-37037019)
chr1 (384-647)||(8224765-8225030)
chr1 (456-675)||(37447145-37447361)
chr1 (396-675)||(44570687-44570965)
chr1 (394-675)||(37447688-37447968)
chr1 (396-652)||(37448207-37448465)
chr1 (414-675)||(15467748-15468009)
chr1 (389-611)||(49216183-49216410)
chr1 (383-611)||(39887123-39887354)
chr1 (384-621)||(28632424-28632661)
chr1 (456-675)||(41822944-41823162)
chr1 (389-612)||(6470532-6470757)
chr1 (429-622)||(44571243-44571438)
chr1 (456-611)||(35491228-35491384)
chr1 (389-675)||(946378-946669)
chr1 (449-647)||(34003525-34003723)
chr1 (449-612)||(21267656-21267819)
chr1 (384-622)||(49659214-49659454)
chr1 (456-595)||(41822405-41822545)
chr1 (449-611)||(23956208-23956371)
chr1 (389-591)||(31166312-31166517)
chr1 (407-570)||(946933-947099)
chr1 (419-573)||(47820245-47820401)
chr1 (389-646)||(10166501-10166759)
chr1 (516-675)||(43619662-43619818)
chr1 (466-577)||(13181669-13181781)
chr1 (429-595)||(50471792-50471961)
chr1 (451-638)||(32201835-32202022)
chr1 (456-560)||(41822594-41822699)
chr1 (429-594)||(52135488-52135656)
chr1 (436-569)||(48953618-48953753)
chr1 (390-611)||(51847855-51848077)
chr1 (461-647)||(32647377-32647561)
chr1 (429-572)||(32128072-32128218)
chr1 (389-538)||(32287851-32288004)
chr1 (451-576)||(1902127-1902253)
chr1 (456-546)||(42230791-42230883)
chr1 (411-574)||(31195480-31195646)
chr1 (384-508)||(43622928-43623054)
chr1 (389-472)||(24273206-24273291)
chr1 (390-444)||(45565397-45565451)
chr1 (391-444)||(27804269-27804322)
chr1 (591-675)||(48953752-48953833)
chr1 (389-444)||(15034761-15034816)
chr1 (389-444)||(23536069-23536124)
chr1 (389-473)||(47165197-47165283)
chr1 (389-447)||(26501092-26501150)
chr1 (392-444)||(34756432-34756484)
chr1 (389-444)||(4038077-4038132)
chr1 (389-444)||(15034661-15034716)
chr1 (389-444)||(30190238-30190293)
chr1 (385-444)||(34756529-34756588)
chr1 (454-558)||(12086961-12087067)
chr1 (387-514)||(34003377-34003506)
chr1 (387-444)||(40264132-40264189)
chr1 (384-444)||(27935587-27935647)
chr1 (389-444)||(4038177-4038232)
chr1 (389-444)||(44410313-44410368)
chr1 (386-444)||(28745796-28745854)
chr1 (532-578)||(48503230-48503276)
chr1 (528-562)||(52280848-52280882)
chr1 (387-444)||(38277517-38277573)
chr1 (387-444)||(50005181-50005238)
chr1 (384-444)||(29446747-29446807)
chr1 (563-643)||(42230873-42230952)
[»] chr8 (62 HSPs)
chr8 (389-675)||(29257146-29257432)
chr8 (389-675)||(24044962-24045249)
chr8 (389-675)||(28324457-28324743)
chr8 (429-675)||(34008823-34009069)
chr8 (391-647)||(44346499-44346757)
chr8 (388-675)||(29482601-29482889)
chr8 (384-675)||(14236-14526)
chr8 (384-638)||(33377127-33377383)
chr8 (383-621)||(33986000-33986240)
chr8 (449-645)||(7079394-7079591)
chr8 (456-644)||(6416255-6416442)
chr8 (402-589)||(8049269-8049458)
chr8 (429-647)||(26520260-26520480)
chr8 (420-638)||(31980313-31980533)
chr8 (420-647)||(13144616-13144844)
chr8 (456-672)||(40733900-40734113)
chr8 (461-612)||(10593147-10593299)
chr8 (389-675)||(1088078-1088358)
chr8 (429-611)||(29611412-29611587)
chr8 (389-595)||(15186689-15186898)
chr8 (456-643)||(31976413-31976594)
chr8 (420-612)||(35404597-35404792)
chr8 (392-579)||(9982642-9982831)
chr8 (461-595)||(24510150-24510284)
chr8 (461-554)||(36625138-36625232)
chr8 (476-675)||(6460678-6460878)
chr8 (454-580)||(33422891-33423019)
chr8 (389-518)||(44889356-44889487)
chr8 (390-532)||(35978942-35979084)
chr8 (492-612)||(7668746-7668867)
chr8 (461-557)||(24063706-24063803)
chr8 (563-675)||(28190495-28190603)
chr8 (541-622)||(44889763-44889843)
chr8 (459-621)||(15718271-15718434)
chr8 (384-444)||(17110866-17110926)
chr8 (572-675)||(26520697-26520797)
chr8 (429-533)||(43167660-43167767)
chr8 (389-444)||(17110971-17111026)
chr8 (449-527)||(34388571-34388650)
chr8 (384-447)||(36103098-36103161)
chr8 (389-472)||(515528-515613)
chr8 (387-444)||(13404827-13404884)
chr8 (389-444)||(3853618-3853673)
chr8 (385-444)||(3853718-3853777)
chr8 (389-444)||(3858076-3858131)
chr8 (385-444)||(3858176-3858235)
chr8 (385-444)||(4156269-4156328)
chr8 (385-444)||(8689130-8689189)
chr8 (488-546)||(28190593-28190652)
chr8 (389-444)||(33902669-33902724)
chr8 (389-444)||(42711382-42711437)
chr8 (389-472)||(23011736-23011821)
chr8 (527-647)||(43167805-43167918)
chr8 (384-444)||(40046801-40046861)
chr8 (501-547)||(10794994-10795041)
chr8 (389-444)||(14800062-14800117)
chr8 (389-444)||(14991694-14991749)
chr8 (389-440)||(27322679-27322730)
chr8 (391-441)||(30435250-30435300)
chr8 (389-422)||(30435350-30435383)
chr8 (612-675)||(36625070-36625130)
chr8 (389-417)||(42711306-42711334)
[»] scaffold0129 (2 HSPs)
scaffold0129 (388-647)||(19596-19856)
scaffold0129 (384-509)||(19195-19321)
[»] scaffold0318 (1 HSPs)
scaffold0318 (389-612)||(2869-3094)
[»] chr4 (68 HSPs)
chr4 (389-675)||(16516173-16516460)
chr4 (389-675)||(35470124-35470410)
chr4 (414-675)||(29091164-29091425)
chr4 (389-636)||(2125859-2126108)
chr4 (435-640)||(17727113-17727320)
chr4 (462-675)||(53760575-53760786)
chr4 (429-647)||(56339175-56339395)
chr4 (456-647)||(13318470-13318661)
chr4 (389-646)||(41139477-41139734)
chr4 (456-644)||(52294859-52295047)
chr4 (456-647)||(42776054-42776245)
chr4 (456-610)||(4490098-4490253)
chr4 (456-647)||(46242908-46243099)
chr4 (456-647)||(47108351-47108542)
chr4 (386-631)||(19461568-19461810)
chr4 (466-603)||(24705432-24705570)
chr4 (462-675)||(54566252-54566462)
chr4 (449-571)||(40338138-40338261)
chr4 (466-622)||(10354423-10354579)
chr4 (419-612)||(26534525-26534721)
chr4 (429-580)||(27284539-27284693)
chr4 (462-634)||(29685900-29686072)
chr4 (449-638)||(46242378-46242553)
chr4 (456-547)||(40548128-40548220)
chr4 (389-557)||(42776639-42776810)
chr4 (393-612)||(31947596-31947818)
chr4 (429-556)||(42775647-42775780)
chr4 (395-498)||(1539649-1539754)
chr4 (462-637)||(30303172-30303347)
chr4 (449-611)||(56118476-56118639)
chr4 (389-595)||(52493928-52494134)
chr4 (491-594)||(13088588-13088692)
chr4 (467-580)||(24062853-24062967)
chr4 (383-444)||(4896734-4896795)
chr4 (390-472)||(10633035-10633119)
chr4 (384-444)||(7352914-7352974)
chr4 (389-444)||(857341-857396)
chr4 (454-574)||(30303790-30303912)
chr4 (389-472)||(31473851-31473936)
chr4 (451-560)||(36104879-36104989)
chr4 (451-569)||(18922460-18922579)
chr4 (454-580)||(9451009-9451136)
chr4 (389-444)||(10128076-10128131)
chr4 (389-444)||(28845973-28846028)
chr4 (389-444)||(49111414-49111469)
chr4 (383-444)||(36456028-36456089)
chr4 (554-622)||(17727560-17727627)
chr4 (377-444)||(1112595-1112662)
chr4 (389-444)||(4441339-4441394)
chr4 (389-444)||(7352814-7352869)
chr4 (389-444)||(15660285-15660340)
chr4 (389-444)||(36455909-36455964)
chr4 (389-447)||(5715746-5715804)
chr4 (556-622)||(42776264-42776329)
chr4 (471-547)||(17727014-17727091)
chr4 (563-675)||(40548031-40548139)
chr4 (387-444)||(42844645-42844702)
chr4 (389-441)||(14982282-14982334)
chr4 (389-444)||(4896650-4896705)
chr4 (389-444)||(11348339-11348394)
chr4 (389-444)||(42844545-42844600)
chr4 (378-444)||(15660174-15660240)
chr4 (526-572)||(33915502-33915548)
chr4 (389-422)||(46243115-46243148)
chr4 (486-546)||(49136860-49136921)
chr4 (384-444)||(26250906-26250966)
chr4 (392-444)||(28845876-28845928)
chr4 (388-432)||(42542981-42543025)
[»] scaffold0400 (1 HSPs)
scaffold0400 (389-675)||(4283-4569)
[»] scaffold0365 (1 HSPs)
scaffold0365 (389-675)||(4927-5213)
[»] scaffold0337 (2 HSPs)
scaffold0337 (389-647)||(15677-15934)
scaffold0337 (429-546)||(16285-16405)
[»] scaffold0169 (1 HSPs)
scaffold0169 (384-603)||(4072-4293)
[»] scaffold0301 (1 HSPs)
scaffold0301 (389-675)||(7153-7439)
[»] scaffold0065 (2 HSPs)
scaffold0065 (389-647)||(2719-2976)
scaffold0065 (449-546)||(9497-9595)
[»] scaffold0014 (2 HSPs)
scaffold0014 (420-638)||(221016-221236)
scaffold0014 (456-638)||(223569-223751)
[»] scaffold0047 (1 HSPs)
scaffold0047 (434-675)||(50101-50333)
[»] scaffold0039 (1 HSPs)
scaffold0039 (456-603)||(109102-109249)
[»] scaffold0417 (1 HSPs)
scaffold0417 (449-634)||(11779-11965)
[»] scaffold1562 (2 HSPs)
scaffold1562 (387-444)||(507-564)
scaffold1562 (383-444)||(401-462)
[»] scaffold1158 (2 HSPs)
scaffold1158 (387-444)||(2029-2086)
scaffold1158 (383-444)||(2131-2192)
[»] scaffold0048 (1 HSPs)
scaffold0048 (389-444)||(82945-83000)
[»] scaffold0009 (2 HSPs)
scaffold0009 (389-445)||(42079-42135)
scaffold0009 (389-444)||(41999-42054)


Alignment Details
Target: chr2 (Bit Score: 350; Significance: 0; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 8 - 385
Target Start/End: Original strand, 43535391 - 43535768
Alignment:
Q  8 tgatattccagtactatgtgttatatttatgggataaagccttacaccacttattctcttgattaatcctaaatttccaacatcacttttctgaaagaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43535391 tgatattccagtactatgtgttatatttatgggataaagccttacaccacttattctcttgattaatcctaaatttccaacatcacttttctgaaagaga 43535490  T
Q  108 gaaattaacttcctttatcctctaaagtaaactcctaatcctcctttaccttctatataaacaaacattactccgacgaacccaaataaccttacgagct 207  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43535491 gaaattaacttcctttatcctctaaagtaaactcccaatcctcctttaccttctatataaacaaacattactccgacgaacccaaataaccttacgagct 43535590  T
Q  208 ttttcactaccccaaagaaaatattcaaaaagagattcaattttaccaaattattttaatacaaaatagagaaaactaaaacaaatcagttacccgatat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  43535591 ttttcactaccccaaagaaaatattcaaaaagagattcaattttaccaaattattttaatacaaaatagagaaaactaaaacaaatgagttacccaatat 43535690  T
Q  308 aattcaaaaccagtgctttgcttcatttgccttttttgaaaaaagtcataagataaattactcgactccaaaaattct 385  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  43535691 aattcaaaaccaatgctttgcttcatttgccttttttgaaaaaattcataagataaattaccctactccaaaaattct 43535768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 13017781 - 13018065
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |  ||||| |||| ||||||||||||||||||||||||||    
T  13017781 agtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagga 13017880  T
Q  487 ttttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13017881 ttttcaaaatgatgaaaatttatgaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgct 13017980  T
Q  587 ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||   ||||||||||||||| |||| | ||||||    
T  13017981 ataattttttaaattttgcatttt-ggtcctcaaattttccaaaattttcaatttga---cccaataaatttataaaaaaattcaaatt 13018065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 384 - 675
Target Start/End: Original strand, 17905651 - 17905930
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| |||||||| ||||| || ||||||||||||||||||||| |||||| |||||||||||| |  ||||| |||| |||| ||||||||||||||||    
T  17905651 ctaagagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattccatt-tttggataataatttg 17905749  T
Q  482 aaggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcg 581  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17905750 aaggattttcaaaatgatggaaatttatgaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttca 17905849  T
Q  582 ttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||||||| ||||| ||||||| |||||||           || || |||||||||||||||  |||||||||||||||| |||||||||||||    
T  17905850 ttgctatatttttttaaattttgcattttg-----------gtccccaaattttcaatttga--ccccaataaatttataaaaaattgcaaatt 17905930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 7228083 - 7227796
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||   |||||||||||||||||||||||||||| ||||||| |    
T  7228083 agtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatttaaataccttgaggtaaatttcattgtttggataatagtttgaagaa 7227984  T
Q  487 ttttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || || |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||     
T  7227983 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagaaaatttcaaatgacacctaaaaattaagaatttcaaaattcttcattgt 7227884  T
Q  586 tata-atttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     |||  ||||| ||||||| |||||| ||||||||||  | ||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  7227883 catatttttttcaaattttacatttt-ggtcctcaaacttaccaaaattttcaatttga--ccccaataaatttataaaaaattgcaaatt 7227796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 390 - 675
Target Start/End: Original strand, 28740599 - 28740884
Alignment:
Q  390 gtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggat 487  Q
    ||||||||| |||||||||||||||||| ||||||||| |||| |||||||||||||| |  || ||||||| |||||||| ||| ||||||||||| ||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttagatgataatttgaagaat 28740698  T
Q  488 tttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  || |    
T  28740699 tttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaactcttcaatgtt 28740798  T
Q  587 ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||| |||| ||||||| || ||| ||||||||||  ||||||||||||||||||||  |||| ||||||||||| |||||||||||||    
T  28740799 ataaattttcaaattttgcaattt-ggtcctcaaactttccaaaattttcaatttga--cccctataaatttataaaaaattgcaaatt 28740884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 395 - 675
Target Start/End: Original strand, 30698289 - 30698568
Alignment:
Q  395 tttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaaggattttca 492  Q
    ||||||||||| ||||||||||| ||||||||| |||| | ||||||||||||   |||||| ||||||||||||||||||||| ||||||| |||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttggataatagtttgaagaattttca 30698388  T
Q  493 aaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataat 591  Q
    ||||||||||||||| | || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |    
T  30698389 aaatgatggaaatttgtgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatatt 30698488  T
Q  592 ttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||| ||||||| ||||||  |||||||||  ||||||||||||||||||||  ||||||||||||| || |||||||||||||    
T  30698489 ttttcaaattttacatttt-agtcctcaaactttccaaaattttcaatttga--ccccaataaattt-taaaaaattgcaaatt 30698568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 413 - 675
Target Start/End: Complemental strand, 7167714 - 7167452
Alignment:
Q  413 ttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttata 510  Q
    ||||| ||||||||| |||| | |||||||||||| |  ||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||     
T  7167714 ttgagggaatgtaatgttttgaaggaattcaaatactttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatg 7167615  T
Q  511 aaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattt 609  Q
    || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| ||||| ||||||| |||||    
T  7167614 aagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatattttttcaaattttacattt 7167515  T
Q  610 tgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | ||||||||||  ||||||||||||||||||||  |||||||||||||||| |||||| ||||||    
T  7167514 t-ggtcctcaaactttccaaaattttcaatttga--ccccaataaatttataaaaaatttcaaatt 7167452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 389 - 646
Target Start/End: Complemental strand, 1583880 - 1583620
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  1583880 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagta 1583781  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||     
T  1583780 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaattttaaatgacacctaaaagctaagaatttcaaatttcttcattgt 1583681  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttcc-aaaattttcaatttgaccc 646  Q
    | | |||||| | ||||| |||||| ||||||||||| |||| ||||||||||| |||||||    
T  1583680 tgttatttttcatattttacatttt-ggtcctcaaattttccaaaaattttcaaattgaccc 1583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 429 - 647
Target Start/End: Complemental strand, 8736472 - 8736252
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||| |||||||    
T  8736472 ttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 8736373  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| |||||| ||||||||||| ||    
T  8736372 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattttgcatttt-ggtcctcaaatttt 8736274  T
Q  626 ccaaaattttcaatttgacccc 647  Q
    |||||||||||||||| |||||    
T  8736273 ccaaaattttcaatttaacccc 8736252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 39630227 - 39630512
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat-gaggtaaatttcattgtttggataataatttgaaggat 487  Q
    |||||||||| |||| ||||||||||||| ||||||| | |||| |||||||||||||| | ||||  ||||  ||||||||||||||||||||||  ||    
T  39630227 agtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaaatatttgaggggaattctattgtttggataataatttgaactat 39630326  T
Q  488 tttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |    
T  39630327 tttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgtt 39630426  T
Q  587 ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  39630427 gttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 39630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 379 - 675
Target Start/End: Complemental strand, 33189338 - 33189051
Alignment:
Q  379 aaattctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataata 476  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| ||||||||||||||||    
T  33189338 aaattctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataata 33189239  T
Q  477 atttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaat 575  Q
    |||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |    
T  33189238 atttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatt 33189139  T
Q  576 tcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||| |||      || ||   |||||||||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  33189138 tcttcattg------ttgtt---atttttcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 33189051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 11141307 - 11141592
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  11141307 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattacattgtttggataataatttgaagta 11141406  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||  |||     
T  11141407 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaattttaaatgacacctaaaagctaagaatttcaaatttctttattgt 11141506  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||||| |||||||| ||| || ||||  |||||||||||||  | |||||||||||||    
T  11141507 tgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaattttaaattga--ccccaataaatttcca-aaaattgcaaatt 11141592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 45094542 - 45094257
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||| ||| || ||||||||||| |||| |||| |||| |||||||| || || |   | || |||| |||||||||||||| ||||||||| |    
T  45094542 agtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatttaactactttaaagtgaattccattgtttggataagaatttgaagaa 45094443  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  45094442 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttccttgt 45094343  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||||| ||| ||||||| || ||| ||| ||||||| || |||||||||||| ||||  |||||||||||||||| |||||||||||||    
T  45094342 tataatctttcaaattttgcacttt-ggttctcaaattttacaaaattttcaaattga--ccccaataaatttata-aaaattgcaaatt 45094257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 35047750 - 35047464
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| |||||||||||  |||||| | ||||||||||||||||||| |  | ||| |||| || ||||||||||||||||||||| |    
T  35047750 agtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttggggtgaattccaatgtttggataataatttgaagca 35047651  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||| |||     
T  35047650 ttttcaaaataatggaaatttataaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaattttttcattgt 35047551  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||| | || ||||| |||||| ||||  ||||||||||| |  | |||||||||||||    
T  35047550 tgttatttttcatattttgcatttt-ggtcctcaattttttcaaaaatttcaaattga--ccccaataaatctccaaaaaattgcaaatt 35047464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 389 - 647
Target Start/End: Original strand, 769038 - 769289
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  769038 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagca 769137  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||     
T  769138 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatttcttcattg- 769236  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
         || ||   |||||||||||| ||||||||||| |||||||| |||||| ||||||||    
T  769237 -----ttgtt---atttttcatttt-ggtcctcaaattttccaaaaatttcaaattgacccc 769289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 461 - 652
Target Start/End: Original strand, 6749233 - 6749424
Alignment:
Q  461 cattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaag 559  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  6749233 cattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctgaaag 6749332  T
Q  560 ttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaat 652  Q
    ||||||||||||||||||||| ||| ||||| |||| ||||||| || ||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  6749333 ttaagaatttcaaaattcttcattgttataaattttcaaattttgcaattt-ggtcctcaaattttccaaaattttcaatttaacccctcaat 6749424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 425 - 646
Target Start/End: Original strand, 12263464 - 12263688
Alignment:
Q  425 aatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gtt 521  Q
    |||||||| || ||||||||||| |  ||| | ||||||||||||||||||||||||||||   ||||||||||||||||||||||| || ||||| |||    
T  12263464 aatattttgagagaattcaaatattttgagttgaatttcattgtttggataataatttgaaattttttcaaaatgatggaaatttatgaagtattttgtt 12263563  T
Q  522 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataa-tttttaaaatttttcattttgggtcctcaa 620  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||| ||||| ||||||| |||||| |||||||||    
T  12263564 caagttaaatttagagaatttcaaatgacacctaaaagttaaaaatttcaaaattcttcattattataattttttcaaattttgcatttt-ggtcctcaa 12263662  T
Q  621 atgttccaaaattttcaatttgaccc 646  Q
    || ||| |||||||||||||||||||    
T  12263663 attttctaaaattttcaatttgaccc 12263688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 434 - 675
Target Start/End: Complemental strand, 7611914 - 7611682
Alignment:
Q  434 agggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaa 530  Q
    |||||||||||||| |  || || |||| |||||||||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  7611914 agggaattcaaatactttgatgtgaattccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattttgtccaagttaaa 7611815  T
Q  531 tttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaa 630  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||| ||| ||         ||||    
T  7611814 tttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgcatttt-ggtgct---------caaa 7611725  T
Q  631 attttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||||||||||||  |||||||||||||||| |||||||||||||    
T  7611724 attttcaatttga--ccccaataaatttataaaaaattgcaaatt 7611682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 449 - 643
Target Start/End: Complemental strand, 32840201 - 32840007
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || || ||||| | |||||| ||||||||||||||| ||||    
T  32840201 tgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaattcatgaagtattttggtcaagtcaaatttagagaatttgaaat 32840102  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttga 643  Q
     ||||||||||| ||||||||||||| |||||| ||| |||||||||| ||||||| |||||| ||||||||||  ||||||||||||| ||||||    
T  32840101 aacacctaaaagctaagaatttcaaatttcttcattgttataatttttcaaattttgcatttt-ggtcctcaaagtttccaaaattttctatttga 32840007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 462 - 675
Target Start/End: Original strand, 44255711 - 44255922
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||     
T  44255711 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagc 44255810  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttat 660  Q
    ||| ||||||||| |||||| ||||| | |||||| | ||||| |||||| |||||| |||| ||||||||  ||||| ||||   ||||||||||||      
T  44255811 taaaaatttcaaatttcttcattgctgttatttttcatattttgcatttt-ggtccttaaattttccaaaaaattcaaattga--acccaataaatttcc 44255907  T
Q  661 acaaaattgcaaatt 675  Q
    | |||||||||||||    
T  44255908 aaaaaattgcaaatt 44255922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 393 - 675
Target Start/End: Original strand, 11606719 - 11607002
Alignment:
Q  393 tgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggataataatttgaaggatttt 490  Q
    |||| ||||| || ||||||||||  |||||||||||||| | ||||| ||||||   |||||| ||||| |||||||||||||||| ||  |   ||||    
T  11606719 tgttaggatgagggaatgttttgaaggaatgtaatattttcaaggaatacaaatactttgaggtgaatttaattgtttggataataagttctattttttt 11606818  T
Q  491 c-aaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctat 588  Q
    | |||||||| ||||||||| || || |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| ||     
T  11606819 caaaaatgatagaaatttattaagtattttgctcaagttaaatttatagaatttcaaatgacacctaaaagttaagaatttaaaaattcttcattgttac 11606918  T
Q  589 aatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||| |||||||  | ||||||||||||||| |||||||| |||||||||||  ||||||||||||| || | ||||| |||||    
T  11606919 aatttttcaaattttgta-tttgggtcctcaaattttccaaaaatttcaatttga--ccccaataaatttctaaataattgtaaatt 11607002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 425 - 612
Target Start/End: Original strand, 1730091 - 1730280
Alignment:
Q  425 aatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gtt 521  Q
    |||||||| |||||||| ||||| |  ||| | ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||  |||| |||    
T  1730091 aatattttgagggaatttaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaa-tttatgaagaattttgtt 1730189  T
Q  522 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgg 612  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | |||||||||| ||| ||| ||||||||    
T  1730190 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttcatcgttataatttttcaaaatttacattttgg 1730280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 383 - 675
Target Start/End: Original strand, 3092278 - 3092563
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataattt 480  Q
    ||||| ||||| ||||||||| | ||||||||||| ||||||| | |||| ||| |||||||||| |  | |||||||| ||||||||||||||||||||    
T  3092278 tctaagagtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtaaattccattgtttggataataattt 3092377  T
Q  481 gaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattctt 579  Q
     ||| |||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||      ||| |||||    
T  3092378 caagcattttcaaaatgatagaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaag------aaatttctt 3092471  T
Q  580 cgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | ||| | | |||||| | ||||| |||||| |||| |||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  3092472 cattgttgttatttttcatattttgcatttt-ggtcatcaaattttccaaaaatttcaaattga--ccccaataaattt-caaaaaattgcaaatt 3092563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 429 - 647
Target Start/End: Original strand, 20935748 - 20935967
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  || || |||| |||||||||||| ||||||||||| |||||||||||||| ||||||||| || ||||| ||| |||    
T  20935748 ttttgagggaattcaaatactttgatgtgaattccattgtttggatgataatttgaagaattttcaaaatgattgaaatttatgaagtattttgtttaag 20935847  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||| |||| ||||||| |||||| ||||||||| | ||    
T  20935848 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttgattgttataa-ttttcaaattttgcatttt-ggtcctcaattttt 20935945  T
Q  626 ccaaaattttcaatttgacccc 647  Q
     ||||| |||||| ||||||||    
T  20935946 tcaaaaatttcaaattgacccc 20935967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 419 - 580
Target Start/End: Complemental strand, 7309804 - 7309640
Alignment:
Q  419 gaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatat 516  Q
    ||||||| | ||||||||||||||||||| |  | ||| |||| |||| ||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  7309804 gaatgtattgttttaagggaattcaaatactttggggtgaattccattatttggataataatttgaagcattttcaaaatgatggaaatttatgaagtat 7309705  T
Q  517 tt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  7309704 tttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttc 7309640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 595
Target Start/End: Original strand, 740709 - 740915
Alignment:
Q  392 gtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattt 489  Q
    ||||||||||||  ||||||||||||| |||||||| ||||  | ||||||| || ||  ||||| ||||| |||||||| || ||||||||||| ||||    
T  740709 gtgtttggatggataaatgttttgagataatgtaatgttttgtgagaattcatatcatttgaggtgaattttattgtttgaatgataatttgaagaattt 740808  T
Q  490 tcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctat 588  Q
    ||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||| ||| ||     
T  740809 tcaaaataatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgagacctaaaagctaataatttcaaatttcttctttgttac 740908  T
Q  589 aattttt 595  Q
    |||||||    
T  740909 aattttt 740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 456 - 647
Target Start/End: Complemental strand, 14306809 - 14306625
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||||||| ||  ||||| ||||||||| |||||||| || ||||| |||||||||||||||| |||||||||||||||||||    
T  14306809 aatttcattgtttggataataatttaaataatttttaaaatgatgaaaatttatgaattattttgttcaagttaaatttaaagaatttcaaatgacacct 14306710  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||||||||||||||||| |||||| ||| |||||||||| |         |||| ||||||||||| ||||||||||||||| ||||||||    
T  14306709 aaaagttaagaatttcaaatttcttcattgttataatttttca--------ttttttggtcctcaaattttccaaaattttcaaattgacccc 14306625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 41585686 - 41585526
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||| ||| |||||||||||| ||||||||||||||||||| |||||    
T  41585686 attgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttgaagttaaatttaaagaatttcaaatgacaccttaaagt 41585587  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||||||||   ||| ||| |||||||||| ||||||| |||||| |||||||||||    
T  41585586 taagaatttcaaaaaatttcattgttataatttttcaaattttacatttt-ggtcctcaaat 41585526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 414 - 594
Target Start/End: Complemental strand, 32839694 - 32839511
Alignment:
Q  414 tgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataa 511  Q
    |||| ||||||||| |||| |||||||||||||| |  || || |||| |||||||||||||||||||||||| |||||| ||||||||||| || || |    
T  32839694 tgagggaatgtaatgttttgagggaattcaaatactttgacgtgaattccattgtttggataataatttgaagaattttccaaatgatggaatttcatga 32839595  T
Q  512 aatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttt 594  Q
    | ||||| | |||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  32839594 agtattttggtcaagtcaaatttagagaatttgaagtgacacctaaaagttaagaatttcaaaattcttcattgttataatttt 32839511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 429 - 646
Target Start/End: Original strand, 21504492 - 21504710
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  ||| | |||| ||||||||| |||||||||||||| ||||||||||||| |  ||||||| || ||||| |||||||    
T  21504492 ttttgagggaattcaaatattttgagatgaattccattgtttgaataataatttgaagaattttcaaaatgaagttaatttatgaagtattttgttcaag 21504591  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaa-tgt 624  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |  || ||||| |||| ||||||| |||||| |||||||||| | |    
T  21504592 ttaaatttagaga-tttcaaatgacacctaaaagttaagattttcaaaattctccaatgttataa-ttttcaaattttgcatttt-ggtcctcaaatttt 21504688  T
Q  625 tccaaaattttcaatttgaccc 646  Q
    |||||||||||  |||||||||    
T  21504689 tccaaaattttacatttgaccc 21504710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 419 - 642
Target Start/End: Original strand, 11594840 - 11595066
Alignment:
Q  419 gaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttc-aaaatgatggaaatttataaaata 515  Q
    |||||||||||||| | ||||| |||||| |  ||||| ||||| |||||||||||||||| ||  |   ||||| |||||||| ||||| ||| || ||    
T  11594840 gaatgtaatattttgaaggaatacaaatactttgaggtgaatttaattgtttggataataagttctatttttttcaaaaatgatagaaatatattaagta 11594939  T
Q  516 -tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggt 614  Q
     |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| || ||||||| |||||||  ||||| |||    
T  11594940 ttttgctcaagttaaatttatagaatttcaaatgacacctaaaagttaagaatttaaaaattcttcattgttacaatttttcaaattttgtatttt-ggt 11595038  T
Q  615 cctcaaatgttccaaaattttcaatttg 642  Q
    | |||||| |||||||| ||||||||||    
T  11595039 catcaaattttccaaaaatttcaatttg 11595066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 382 - 612
Target Start/End: Complemental strand, 2274866 - 2274634
Alignment:
Q  382 ttctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatt 479  Q
    |||||||||||||||||||||  | ||||||| |||  |||  ||||||||||||||||||||||| |   || | |||| |||||||||||||| ||||    
T  2274866 ttctaatagtgtgtttggatgaaggaatgtttcgaggtaatacaatattttaagggaattcaaatatttttagatcaattccattgtttggataagaatt 2274767  T
Q  480 tgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattct 578  Q
     || |  |||||||||||||||| |||||| ||  |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||  |||| |    
T  2274766 gga-gatttttcaaaatgatggagatttatgaagaattttgttcaagttaaatttagagaatttcaaatgacacataaaagctaagaatttc-gaatttt 2274669  T
Q  579 tcg-ttgctataatttttaaaatttttcattttgg 612  Q
     || ||  |||||||||||||||||| ||||||||    
T  2274668 acgattcgtataatttttaaaattttgcattttgg 2274634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 474 - 580
Target Start/End: Complemental strand, 28022088 - 28021981
Alignment:
Q  474 ataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaa 572  Q
    ||||||||||| |||| |||||||||| |||||||| |  ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  28022088 ataatttgaagaatttgcaaaatgatgaaaatttatgaggtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaggaatttcaa 28021989  T
Q  573 aattcttc 580  Q
    | ||||||    
T  28021988 atttcttc 28021981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 453 - 611
Target Start/End: Complemental strand, 44205663 - 44205503
Alignment:
Q  453 gtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgt--tcaagttaaatttagagaatttcaaatgac 550  Q
    |||||||  ||| ||||||| |||| |||||| ||||| |||||||||||||||||| || | ||| |  |||||||||||||| | |||||||||||||    
T  44205663 gtaaattctattatttggatgataaattgaagaattttgaaaatgatggaaatttatgaagtgtttttattcaagttaaatttaaaaaatttcaaatgac 44205564  T
Q  551 acctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttg 611  Q
    ||||||||||||| |||| |||| | |||| ||| || ||  ||| ||||||| |||||||    
T  44205563 acctaaaagttaataattacaaattacttcattgttaaaaaatttcaaattttgcattttg 44205503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 383 - 554
Target Start/End: Original strand, 11036338 - 11036512
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataattt 480  Q
    ||||| ||||| |||  |||| ||| ||||||| |  |||||||| |||||| ||||||||||||   |||| | ||||| ||| || | ||||||||||    
T  11036338 tctaagagtgtatttaaatggagaattgttttgtgctaatgtaatgttttaaaggaattcaaatacattgagatgaattttattattagaataataattt 11036437  T
Q  481 gaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| ||||| |||||||||||||||||| || || |||||||||||  |||||| ||||||| |||||| ||||    
T  11036438 gaagaatttttaaaatgatggaaatttatgaagtattttgttcaagtataatttaaagaatttaaaatgatacct 11036512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 611
Target Start/End: Original strand, 11037169 - 11037235
Alignment:
Q  545 aatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttg 611  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||| |||||||    
T  11037169 aatgacacctaaaagttaagaatttcaaatttcttcattgttataatttttcaaattttgcattttg 11037235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 573
Target Start/End: Complemental strand, 36272482 - 36272365
Alignment:
Q  454 taaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacc 553  Q
    ||||||| ||||||||||| ||||||||||  ||||| |||||| || |||||||||||   ||||| ||| || ||||||||| |||||||||||||      
T  36272482 taaatttaattgtttggatgataatttgaataatttttaaaatggtgcaaatttataaa--gtttgtccaacttgaatttagagcatttcaaatgacatt 36272385  T
Q  554 taaaagttaagaatttcaaa 573  Q
    |||||| || ||||||||||    
T  36272384 taaaagctacgaatttcaaa 36272365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 27033492 - 27033547
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  27033492 agtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaa 27033547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 11595406 - 11595464
Alignment:
Q  502 aaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaag 559  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  11595406 aaatttataaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaaag 11595464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 31613921 - 31614003
Alignment:
Q  492 aaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaa 573  Q
    ||||||||| |||||||  || ||||| ||||||||| |||||| ||||||  ||||||||||||||||||||||||||||||    
T  31613921 aaaatgatgaaaatttacgaagtattttgttcaagtttaatttacagaattaaaaatgacacctaaaagttaagaatttcaaa 31614003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 11607308 - 11607365
Alignment:
Q  502 aaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaa 558  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  11607308 aaatttataaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaaa 11607365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 11793895 - 11793982
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||||||| ||| ||||||| ||||||||| || | ||||||||||||||   |||||| |||| ||||||||||||    
T  11793895 atagtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 11793982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 384 - 472
Target Start/End: Original strand, 10480116 - 10480206
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| ||   ||||||||||||||   |||||| |||| ||||||||||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaattccattgtttggat 10480206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 14365702 - 14365757
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  14365702 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 14365757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 41461672 - 41461617
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  41461672 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 41461617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 2924825 - 2924887
Alignment:
Q  486 attttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    ||||||||||||||| |||||||| || ||||| |||||||||||| ||||||||||||||||    
T  2924825 attttcaaaatgatgaaaatttattaagtattttgttcaagttaaaattagagaatttcaaat 2924887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 11532324 - 11532239
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||||| ||| ||| ||| ||||||||| |||| ||||||||||||||   |||||| |||| ||||||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 11532239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 41461511 - 41461569
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaatt 441  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| |||| ||||||||    
T  41461511 tctaatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatt 41461569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 444
Target Start/End: Original strand, 11684603 - 11684656
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11684656  T

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Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 14365856 - 14365801
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||    
T  14365856 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 14365801  T

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Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 14537201 - 14537256
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||    
T  14537201 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaa 14537256  T

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Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 17180299 - 17180354
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||    
T  17180299 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaa 17180354  T

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Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 549
Target Start/End: Original strand, 42941047 - 42941098
Alignment:
Q  499 tggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatga 549  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  42941047 tggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatga 42941098  T

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Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 562
Target Start/End: Complemental strand, 2701941 - 2701871
Alignment:
Q  492 aaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagtta 562  Q
    ||||||||| |||||||| ||   ||||||||| ||||||||||||| ||| ||||||||||||| |||||    
T  2701941 aaaatgatgaaaatttatgaatattttgttcaaattaaatttagagagttttaaatgacacctaatagtta 2701871  T

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Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 556
Target Start/End: Original strand, 767280 - 767345
Alignment:
Q  492 aaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaa 556  Q
    |||||||||||||||||| || | ||| || |||||| ||||| ||||||||||||||||||||||    
T  767280 aaaatgatggaaatttatgaagttttttgtccaagttcaattttgagaatttcaaatgacacctaa 767345  T

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Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 11716550 - 11716501
Alignment:
Q  395 tttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11716501  T

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Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 559
Target Start/End: Complemental strand, 14404958 - 14404911
Alignment:
Q  511 aaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaag 559  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  14404958 aaatattt-ttcaagttaaatttaaagaattttaaatgacacctaaaag 14404911  T

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Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 784950 - 784895
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||| ||||||  ||||||||| |||| |||||||||||    
T  784950 agtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaa 784895  T

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Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 11716410 - 11716465
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||||   ||||||||||| ||||||||| |||| |||||||||||    
T  11716410 agtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaa 11716465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 14954268 - 14954323
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||| | | ||||||||||| ||||||||| ||||||| ||||||||    
T  14954268 agtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattcaa 14954323  T

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Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 11595334 - 11595372
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaat 422  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  11595334 ctaatagtgtgtttggatggggtaatgttttgagggaat 11595372  T

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Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 784790 - 784847
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaatt 441  Q
    |||| |||||||||||||||  |||||||||||| ||||||||| |||| | ||||||    
T  784790 ctaagagtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatt 784847  T

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Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 11607237 - 11607274
Alignment:
Q  385 taatagtgtgtttggatggggaaatgttttgagagaat 422  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  11607237 taatagtgtgtttggatggggtaatgttttgagggaat 11607274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 44205724 - 44205683
Alignment:
Q  376 caaaaattctaatagtgtgtttggatggggaaatgttttgag 417  Q
    |||||| | ||| |||||||||||||||||||||||||||||    
T  44205724 caaaaactttaaaagtgtgtttggatggggaaatgttttgag 44205683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 184; Significance: 3e-99; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 1368479 - 1368762
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |  ||||| ||||  ||||||||||||||||| |||||||    
T  1368479 agtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtgaattctattgtttggataataatatgaagga 1368578  T
Q  487 ttttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  1368579 ttttcaaaatgatggaaatttatgaaatatttgttcaagttaaatttagagaatttcaaatgacacttaaaagttaagaatttcaaaattcttcattgct 1368678  T
Q  587 ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||| ||||||| |||||| || |||||||| ||||||||||||||||||||   || |||||||||||| |||||||||||||    
T  1368679 ataattttttaaattttacatttt-ggccctcaaattttccaaaattttcaatttga---cctaataaatttata-aaaattgcaaatt 1368762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 384 - 612
Target Start/End: Original strand, 28918162 - 28918392
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||| | ||||||||||| ||||||||| |||||||| |||||||||| |  ||||| ||||||||||||||||||||||||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtgaatttcattgtttggataataatttg 28918261  T
Q  482 aaggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcg 581  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||     
T  28918262 aaggattttcaaaatgatggaaatttatgaaatatttgttcaagttaaattcagagaatttcaaatgacacctaaaagttacgaatttcaaaatttttca 28918361  T
Q  582 ttgctataatttttaaaatttttcattttgg 612  Q
    |||||||||||||| ||||||| ||||||||    
T  28918362 ttgctataattttttaaattttgcattttgg 28918392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 449 - 647
Target Start/End: Original strand, 1195397 - 1195595
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||| |||| |||||||| ||||||||||||||| ||||||||||| |||||||||||| || ||||| |||||||| ||||||||||||||||||||    
T  1195397 tgaggtgaattccattgtttagataataatttgaagaattttcaaaattatggaaatttatgaagtattttgttcaagtcaaatttagagaatttcaaat 1195496  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    |||||||||||||||||||||||||| |||||  ||| ||| |||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  1195497 gacacctaaaagttaagaatttcaaatttcttaattgttatcatttttaaaattttacatttt-ggtcctcaaattttccaaaattttcaatttgacccc 1195595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 456 - 622
Target Start/End: Original strand, 31412972 - 31413138
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||||    
T  31412972 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttagttcaagttaaatttaaagaatttcaaatgacacct 31413071  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||| |||||||||||    
T  31413072 aaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgcatttt-ggtcctcaaat 31413138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 462 - 647
Target Start/End: Complemental strand, 6358247 - 6358062
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    |||||| | |||||||||||||| ||||||||||| |||||||||||| ||  |||| || ||||||||||||||||| ||||||||||||||||||||     
T  6358247 attgttagaataataatttgaagaattttcaaaataatggaaatttattaagcattttgtccaagttaaatttagagagtttcaaatgacacctaaaaga 6358148  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||||||||||| |||||| ||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||| ||||||||    
T  6358147 taagaatttcaaatttcttcattgttataatttttaaaattttgcatttt-ggtcctcaaattttccaaaattttcaaattgacccc 6358062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 456 - 638
Target Start/End: Original strand, 8475232 - 8475414
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  8475232 aattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacct 8475331  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
    ||||| ||||||||||||| |||||| ||| | | |||||| | ||||| |||||| | ||||||||| |||||||| ||||||    
T  8475332 aaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcatttt-gatcctcaaattttccaaaaatttcaa 8475414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 414 - 622
Target Start/End: Original strand, 9697489 - 9697699
Alignment:
Q  414 tgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataa 511  Q
    |||| |||||| || |||| | |||||||||||| |  || || |||| |||||||||||||||| ||||| | ||||||||||||||| |||||||| |    
T  9697489 tgagggaatgtgatgttttgaaggaattcaaatactttgatgtgaattccattgtttggataatagtttgatgaattttcaaaatgatgaaaatttatga 9697588  T
Q  512 aatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcatttt 610  Q
    | ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||  |||||||||||||||||| ||||||    
T  9697589 agtattttgttcaagttaaatttagagaatttcaaatgacaccgaaaagttaataatttcaaaattcttcatttttataatttttaaaattttgcatttt 9697688  T
Q  611 gggtcctcaaat 622  Q
     |||||||||||    
T  9697689 -ggtcctcaaat 9697699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 464 - 647
Target Start/End: Original strand, 10105118 - 10105300
Alignment:
Q  464 tgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagtta 562  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||| || || ||| |||||||||||||||||||||||| ||||||||||||||  ||    
T  10105118 tgtttggataataatttgaagcatttttaaaatgatggaaatgtatgaagtattttattcaagttaaatttagagaatttc-aatgacacctaaaaacta 10105216  T
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
     |||||||||| |||||| |||  ||| ||||| |||||||||||||| ||||||||| | || ||||||||| || ||||||||    
T  10105217 ggaatttcaaatttcttcattgtaatattttttcaaatttttcatttt-ggtcctcaattttttcaaaattttgaaattgacccc 10105300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 420 - 612
Target Start/End: Complemental strand, 26901804 - 26901609
Alignment:
Q  420 aatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatt 517  Q
    ||||||||||||| ||||||||||||||||   |||| |||||||||||| |||  |||||||  || ||||| |||||||| ||||||||| || ||||    
T  26901804 aatgtaatattttgagggaattcaaataattttaggtgaatttcattgttcggaggataattttgagaatttttaaaatgatagaaatttatgaagtatt 26901705  T
Q  518 t-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgg 612  Q
    | ||||||||||||||||  ||||||||||||||| ||||||   |||||||| ||| |||||| ||  |||| ||||| |||| || ||||||||    
T  26901704 ttgttcaagttaaatttattgaatttcaaatgacatctaaaaacaaagaattttaaatttcttcatttttatagtttttcaaatattacattttgg 26901609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 456 - 611
Target Start/End: Complemental strand, 29395521 - 29395365
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||| |||||  || ||||| ||| || ||||||||| |||||||||||||||| ||    
T  29395521 aatttcattggttggatgataatttggagaattttcaaaatgatggagatttacgaagtattttgttgaaattaaatttaaagaatttcaaatgacatct 29395422  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttg 611  Q
      | |||||| |||| ||| |||||||||  ||| |||||| ||||||| |||||||    
T  29395421 cgacgttaaggatttgaaatttcttcgttcttatcatttttcaaattttacattttg 29395365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 15616370 - 15616271
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    |||||| ||||  ||||||||||||||||||| ||| ||||| ||||||||| |||||||| || || ||||||||||||||||||||||||||| ||||    
T  15616370 tgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatgcaaatttatgaagtattttgttcaagttaaatttagagaattttaaat 15616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 495
Target Start/End: Original strand, 15832470 - 15832576
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    |||||||||||| || ||||||| ||  ||||||||| |||||||||||||||||||   || ||| |||||||||||||||||| |||||||||| |||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgtttggatactaatttgaagtatt 15832569  T
Q  489 ttcaaaa 495  Q
    |||||||    
T  15832570 ttcaaaa 15832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 580
Target Start/End: Complemental strand, 29902017 - 29901953
Alignment:
Q  516 tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||||||||| ||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  29902017 tttgttcaatttaaatttaaagaatttcatatgacacataaaagttaagaatttcaaaattcttc 29901953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 8574827 - 8574767
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  8574827 ctaagagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaa 8574767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 8574697 - 8574752
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  8574697 agtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaa 8574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 34245051 - 34244966
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| ||||||||||||||   ||| ||||||| ||||||||||||    
T  34245051 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttggat 34244966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 9763012 - 9763069
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||    
T  9763012 atagtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaa 9763069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 9285649 - 9285704
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  9285649 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 9285704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 13487277 - 13487362
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||| ||||||| ||||||||||| ||||||| | || | ||||||||||||||   |||||| |||||||||||||||||    
T  13487277 agtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 13487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 6919869 - 6919809
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||||    
T  6919869 ctaagagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaa 6919809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 509
Target Start/End: Complemental strand, 10737726 - 10737668
Alignment:
Q  451 aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttat 509  Q
    |||||||||||||||||| ||| ||| |||| || |||||||||||||| |||||||||    
T  10737726 aggtaaatttcattgttttgatgatagtttggagaattttcaaaatgatagaaatttat 10737668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 29889505 - 29889447
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    ||||||||||||||| | ||||||||||  ||||||||| |||| ||||||||||||||    
T  29889505 agtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaata 29889447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 518
Target Start/End: Complemental strand, 413683 - 413614
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt 518  Q
    |||||| ||||||||| |||  |||||||||||||  ||||| ||||| ||| |||||||||||||||||    
T  413683 tgaggtgaatttcattttttttataataatttgaataatttttaaaataatgaaaatttataaaatattt 413614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 776242 - 776182
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||| || |||||||||||| ||||||||| |||| ||| |||||||    
T  776242 ctaagagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattcaa 776182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 444
Target Start/End: Original strand, 6919709 - 6919765
Alignment:
Q  388 tagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||||| | |||| |||||| ||||||||| |||| |||||||||||    
T  6919709 tagtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaa 6919765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 776082 - 776137
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||| ||||| ||||||||||||| ||||||||| |||| ||| |||||||    
T  776082 agtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaa 776137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 573
Target Start/End: Original strand, 18596166 - 18596209
Alignment:
Q  530 atttagagaatttcaaatgacacctaaaagttaagaatttcaaa 573  Q
    ||||| |||||||||||||||||||||||||||  |||||||||    
T  18596166 atttaaagaatttcaaatgacacctaaaagttagaaatttcaaa 18596209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 427
Target Start/End: Original strand, 33733434 - 33733472
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaat 427  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  33733434 agtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 444
Target Start/End: Complemental strand, 15299579 - 15299527
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| | |||||||||    
T  15299579 tgtgtttggatggggaa-tgttttgagggaatgtaatgttttgaaggaattcaa 15299527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 546
Target Start/End: Original strand, 15832760 - 15832820
Alignment:
Q  488 tttcaaaatgatggaaattt-ataaaatattt-gttcaagttaaatttagagaatttcaaa 546  Q
    |||||||||||||||||||| || || ||||| ||||||||| |||||| |||||||||||    
T  15832760 tttcaaaatgatggaaattttatgaagtattttgttcaagttcaatttaaagaatttcaaa 15832820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 3e-87; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 22303938 - 22303652
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| | ||||||||||||   |||||| ||||||||||||||| ||||| ||||||| |    
T  22303938 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaa 22303839  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  22303838 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgt 22303739  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     ||| ||||| ||||||| |||||| ||||||||||  ||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  22303738 catattttttcaaattttacatttt-ggtcctcaaactttccaaaattttcaatttga--ccccaataaatttataaaaaattgcaaatt 22303652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 384 - 675
Target Start/End: Original strand, 10314646 - 10314937
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||| ||||||||||| ||||||||||||   |||||||||||||||||||||||||||| |  || || ||||  ||||||||||||||||||||    
T  10314646 ctaagagtatgtttggatggagaaatgttttgaagaaatgtaatattttaagggaattcaaatattttgatgtgaattctattgtttggataataatttg 10314745  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| ||||||||||||||| |||||||| || ||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  10314746 aagaattttcaaaatgatgaaaatttatgaagtattttgtttaagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttaaaaattcttc 10314845  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||| ||||| |||| ||||||| || ||| ||||||||| | ||||||||||||||||||||  |||| ||||||||||| |||||||||||||    
T  10314846 gttgttataaattttcaaattttacaattt-ggtcctcaagttttccaaaattttcaatttga--cccctataaatttataaaaaattgcaaatt 10314937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 391 - 647
Target Start/End: Complemental strand, 9894388 - 9894130
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    ||||||||||||||| ||||||||||| ||||||||| ||   |||||||||||||| |  ||||| |||| |||||||||||||||||||||||| |||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaatt 9894289  T
Q  489 ttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgcta 587  Q
    ||||||||||||| ||||||| || ||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||| ||    
T  9894288 ttcaaaatgatgggaatttatgaagtattttgttcaagttaaattcagagaaattcaaatgacacctaaaaggtaagaatttcaaaattcttcattgtta 9894189  T
Q  588 taatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    |||| ||| ||||||| |||||| ||||||||| | || |||||||||||||||||||||    
T  9894188 taatctttcaaattttgcatttt-ggtcctcaattttttcaaaattttcaatttgacccc 9894130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 383 - 675
Target Start/End: Original strand, 927298 - 927588
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataattt 480  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| | |||| |||||||||||||| |  | ||| |||| ||||||||||||||||||||    
T  927298 tctaagagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataattt 927397  T
Q  481 gaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattctt 579  Q
    |||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  927398 gaagcattttcaaaat-atggaaatttatgaagtattttgttcaagttaaatttagaggatttcaaatgacacctaaaagctaagaatttcaaatttctt 927496  T
Q  580 cgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | ||| | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  927497 cattgttgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttcca-aaaattgcaaatt 927588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 429 - 675
Target Start/End: Original strand, 33146215 - 33146461
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||| |||||||    
T  33146215 ttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 33146314  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||| ||| ||| |||||| ||||||||||| ||    
T  33146315 ttaaatttagagaatttcaaatgacacataaaagttaagaatttcaaaattcttcattgttatattttttcaaaatttgcatttt-ggtcctcaaatttt 33146413  T
Q  626 ccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||||||||||||  ||||||||| ||| |  |||||||||||||    
T  33146414 ccaaaattttcaatttga--ccccaataattttttttaaaattgcaaatt 33146461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 384 - 675
Target Start/End: Complemental strand, 41762288 - 41762006
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||    
T  41762288 ctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttg 41762189  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  41762188 aagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatttcttc 41762089  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     |||      || ||   |||||||||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  41762088 attg------ttgtt---atttttcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 41762006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 429 - 643
Target Start/End: Complemental strand, 17542389 - 17542173
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  ||||| |||| ||||||||| |||||||||| ||| ||||| |||||||||||||||||| || ||||| |||||||    
T  17542389 ttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttaaagaatttttaaaatgatggaaatttatgaagtattttgttcaag 17542290  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||| ||||||| |||||| ||||||||||| ||    
T  17542289 ttgaatttagagaatttcaaatgacatctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattttgcatttt-ggtcctcaaatttt 17542191  T
Q  626 ccaaaattttcaatttga 643  Q
    ||||||||||||||||||    
T  17542190 ccaaaattttcaatttga 17542173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 425 - 675
Target Start/End: Original strand, 28489501 - 28489750
Alignment:
Q  425 aatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgtt 521  Q
    |||||||| || ||||||||||| |  ||||| |||| |||||||| ||||||||||| ||| ||||| |||||||||||||||||| || || ||||||    
T  28489501 aatattttgagagaattcaaatactttgaggtgaattccattgtttcgataataatttaaagaatttttaaaatgatggaaatttatgaagtagtttgtt 28489600  T
Q  522 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaa 621  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| ||||| ||||||| ||||||  |||||||||    
T  28489601 caagttaaatttagagaatttcaaatgacatctaaaagttaataatttcaaaattcttcattgttatattttttcaaattttgcatttt-agtcctcaaa 28489699  T
Q  622 tgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |  |||||||||||||||||||  ||||||||||||| |  |||||||||||||    
T  28489700 ttatccaaaattttcaatttga--ccccaataaattt-tttaaaattgcaaatt 28489750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 389 - 646
Target Start/End: Complemental strand, 32250165 - 32249907
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||||| ||||||||| ||| ||||| |||| ||||||||||||||   |||| | |||| |||||||||||||||||||| ||| |    
T  32250165 agtgtgtttggatggggaa-tgttttgagggaaagtaatgttttgagggaattcaaataccttgagatgaattccattgtttggataataatttaaagaa 32250067  T
Q  487 ttttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    |||| |||||||||| ||||||| || |||||  ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||     
T  32250066 tttttaaaatgatggtaatttatgaagtattttattcaagttaaatttaaagaattttaaatgacacctaaaagttatgaatttcaaaattcttcattgt 32249967  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccc 646  Q
    |||| ||||| ||||||| |||||| ||||| ||||| ||||||||   ||||||||||||    
T  32249966 tatattttttcaaattttgcatttt-ggtccccaaattttccaaaaaaatcaatttgaccc 32249907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 389 - 638
Target Start/End: Original strand, 35379346 - 35379595
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||  |  || || ||||| |||| |||||| ||||||||||| |    
T  35379346 agtgtgtttggatggggaa-tgttttgagataatgtaatgttttgagggaattcaaattctttgaagtgaattttattgattggatgataatttgaag-a 35379443  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||     
T  35379444 ttttcaaaatggtggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaataatttcacatttcttcattgt 35379543  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
    ||||| |||| ||| ||| |||||| || |||||||| |||| ||||||||||    
T  35379544 tataagttttcaaaatttgcatttt-ggacctcaaattttcctaaattttcaa 35379595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 456 - 622
Target Start/End: Original strand, 34105142 - 34105308
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||  || ||||| ||| ||||||||||||||||||||||||||||||||    
T  34105142 aatttcattgtttggataataatttgaagaattttcaaaatgatagaaatttacgaagtattttgtttaagttaaatttagagaatttcaaatgacacct 34105241  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    |||||||||||||||||||||||||| ||| |||||||||  ||||||| |||||| |||||||||||    
T  34105242 aaaagttaagaatttcaaaattcttctttgttataattttccaaattttgcatttt-ggtcctcaaat 34105308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 434 - 647
Target Start/End: Complemental strand, 6772234 - 6772021
Alignment:
Q  434 agggaattcaaataatgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatt 532  Q
    |||||||| ||||| |||||| ||||||||||||||||| ||||||||||  ||| |||||| ||||||||||||| || ||||| ||||||||||||||    
T  6772234 agggaatttaaatactgaggtgaatttcattgtttggatgataatttgaataattatcaaaacgatggaaatttatgaagtattttgttcaagttaaatt 6772135  T
Q  533 tagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaat 632  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||   |  || ||||||| || |||| |||||| ||||||||||| |||||||||    
T  6772134 tagagaatttcaaatgacacgtaaaagctaagaatttcaaatttcttaaatattaaaatttttcaatttttgcatttt-ggtcctcaaattttccaaaat 6772036  T
Q  633 tttcaatttgacccc 647  Q
    |||||| ||||||||    
T  6772035 tttcaaattgacccc 6772021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 449 - 675
Target Start/End: Original strand, 12479971 - 12480188
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||| || || ||||| |||||||  ||||||||||||||| ||||    
T  12479971 tgaggtgaatttcattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttgttcaagacaaatttagagaatttgaaat 12480070  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    |||||||||||| |||||||||||||||||||  ||| |||||||||| |||||||        ||||||||| |  |||||||||||||||||||  ||    
T  12480071 gacacctaaaagctaagaatttcaaaattcttgattgttataatttttcaaatttt--------ggtcctcaagttctccaaaattttcaatttga--cc 12480160  T
Q  648 ccaataaatttatacaaaattgcaaatt 675  Q
    |||||||||||  | |||||||||||||    
T  12480161 ccaataaattttcaaaaaattgcaaatt 12480188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 462 - 647
Target Start/End: Original strand, 8264585 - 8264770
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| || |||||  ||||||||||||||||||||||| |||||||||||||||||    
T  8264585 attgtttagataataatttgaagaatttccaaaatgatggaaatttatgaagtattttattcaagttaaatttagagaattttaaatgacacctaaaagt 8264684  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    |||||||||||||||||||| ||| |||| ||||  ||||||| |||||| |||||| |||| ||||| || ||| |||||||||||    
T  8264685 taagaatttcaaaattcttcattgttatagttttccaaattttgcatttt-ggtcctaaaattttccacaaatttaaatttgacccc 8264770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 473 - 622
Target Start/End: Complemental strand, 40089799 - 40089650
Alignment:
Q  473 aataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttca 571  Q
    |||||||| ||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40089799 aataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttca 40089700  T
Q  572 aaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||| ||| |||| ||||| ||||||| |||||| |||||||||||    
T  40089699 aaattcttcattgttatattttttcaaattttgcatttt-ggtcctcaaat 40089650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 462 - 673
Target Start/End: Original strand, 35111303 - 35111512
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| || ||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  35111303 attgtttggataataatttgaagaactttcaaaatgatgaaaatttatgaagtattttgtttaagttaaatttaaagaatttcaaatgacacctaaaagt 35111402  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttat 660  Q
    ||||||||||||||   ||| ||| ||||| |||| ||| |||  | ||| ||||||||||  ||||||||||||||||||||  |||| ||||||||||    
T  35111403 taagaatttcaaaaaatttcattgttataaattttcaaaatttgaaattt-ggtcctcaaactttccaaaattttcaatttga--cccctataaatttat 35111499  T
Q  661 acaaaattgcaaa 673  Q
    | |||||||||||    
T  35111500 aaaaaattgcaaa 35111512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 429 - 622
Target Start/End: Complemental strand, 15270882 - 15270687
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaag 525  Q
    |||| |||||||||||||| |  ||||| |||| ||||||||| ||||||||||| || || ||||||||||||||||||||| || |||||  ||||||    
T  15270882 ttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttgtagaatattcaaaatgatggaaatttatgaagtattttattcaag 15270783  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||   | ||||| |||| ||||||| |||||| |||||||||||    
T  15270782 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaactcttcaaagttataaattttcaaattttgcatttt-ggtcctcaaat 15270687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 456 - 635
Target Start/End: Complemental strand, 17493164 - 17492985
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgttcaa-gttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||| || || |||||||||| ||||||||||||||||||     
T  17493164 aattccattgtttggatgataatttggagaattttcaaaatgatggaaatttataaagtatttttttaaagttaaatttaaagaatttcaaatgacaccg 17493065  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaatttt 635  Q
    ||||| |||||||||||||  ||||| ||  |||||||| | |||||||| ||||| ||||||||||| ||||| ||||||    
T  17493064 aaaagctaagaatttcaaatatcttcattcttataatttattaaatttttaatttt-ggtcctcaaattttccagaatttt 17492985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 389 - 542
Target Start/End: Original strand, 14834826 - 14834982
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||| |||||  ||||||| ||| ||||||||| |||||||||||| |||||| |  ||||| ||||||||||||||||||||||||||||| |    
T  14834826 agtgtgtttgcatgggagaatgtttcgagggaatgtaatgttttaagggaatccaaatactttgaggtgaatttcattgtttggataataatttgaagaa 14834925  T
Q  487 ttttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaattt 542  Q
    |||||||||||||| |||||||| || || ||| |||||| ||||||||||||||||    
T  14834926 ttttcaaaatgatgaaaatttatgaagtatttttttcaagctaaatttagagaattt 14834982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 516 - 622
Target Start/End: Original strand, 22768199 - 22768304
Alignment:
Q  516 tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtc 615  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| |||||| ||||    
T  22768199 tttgttcaagttgaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattttgcatttt-ggtc 22768297  T
Q  616 ctcaaat 622  Q
    |||||||    
T  22768298 ctcaaat 22768304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 528 - 642
Target Start/End: Original strand, 28490109 - 28490222
Alignment:
Q  528 aaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttcc 627  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||| ||| ||| |||| | ||||||||||| ||||    
T  28490109 aaatttagaggatttcaaatgacacctaaaagttaagaatttcaaaatgctttattgttataatttttcaaagtttgcattct-ggtcctcaaattttcc 28490207  T
Q  628 aaaattttcaatttg 642  Q
    |||||||||||||||    
T  28490208 aaaattttcaatttg 28490222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 37241116 - 37241018
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaat 547  Q
    |||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||| || |||||||| |||||||||||| ||||||||||||    
T  37241116 tgaggtgaattccattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtatttgttgaagttaaatttaaagaatttcaaat 37241018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 456 - 644
Target Start/End: Complemental strand, 8674475 - 8674289
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacaccta 555  Q
    |||| ||||||||||||||||| | || | |||| |||||| ||| |||||||| ||   ||||||||||||||||||||||||||||||||||||| ||    
T  8674475 aattccattgtttggataataaatgga-gaatttccaaaattatgaaaatttatgaatattttgttcaagttaaatttagagaatttcaaatgacacata 8674377  T
Q  556 aaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgac 644  Q
    |||  ||||||||| ||| || ||| ||  |||||||||| ||||||| |||||| |||||||||   |||||||||||| || |||||    
T  8674376 aaaactaagaattttaaatttattcattcttataatttttcaaattttgcatttt-ggtcctcaatatttccaaaattttgaaattgac 8674289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 451 - 573
Target Start/End: Original strand, 11409247 - 11409370
Alignment:
Q  451 aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatga 549  Q
    |||||||||||||| |||  ||| ||||||| || ||||| |||||||||||||||| | || ||||| || ||||||||||||| ||||||||||||||    
T  11409247 aggtaaatttcattatttaaatagtaatttggagaatttttaaaatgatggaaatttgtgaagtattttgtccaagttaaatttaaagaatttcaaatga 11409346  T
Q  550 cacctaaaagttaagaatttcaaa 573  Q
    ||| |||||| |||||||||||||    
T  11409347 cacttaaaagctaagaatttcaaa 11409370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 30519082 - 30519173
Alignment:
Q  464 tgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| || || |||||||||||| |||||| |||||||||||||||||||    
T  30519082 tgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagttcaatttaaagaatttcaaatgacacct 30519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 30559422 - 30559513
Alignment:
Q  464 tgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| || || |||||||||||| |||||| |||||||||||||||||||    
T  30559422 tgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagttcaatttaaagaatttcaaatgacacct 30559513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 22766954 - 22767075
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||| ||||||||||||||   | |||| ||||  ||||||||||||||||||| ||| |    
T  22766954 agtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattctattgtttggataataatttaaagaa 22767053  T
Q  487 ttttcaaaatgatggaaattta 508  Q
    |||||| |||||||||||||||    
T  22767054 ttttcagaatgatggaaattta 22767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 37241590 - 37241506
Alignment:
Q  463 ttgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaa 546  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||    
T  37241590 ttgtttggataatattttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaa 37241506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 477 - 648
Target Start/End: Complemental strand, 6955463 - 6955291
Alignment:
Q  477 atttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaat 575  Q
    |||||||| ||||| ||||||||| || ||||||||  ||||  || ||||||||||||||||||||||||||||||| ||||| |||||| |||||| |    
T  6955463 atttgaagaatttttaaaatgatg-aagtttataaagaatttaatttaagttaaatttagagaatttcaaatgacaccaaaaagctaagaaattcaaatt 6955365  T
Q  576 tcttcgttgctataa--tttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccc 648  Q
     |||| ||  |||||  ||||| ||||||| |||||| |||||||| || ||||| ||||||||| |||||||||    
T  6955364 ccttcattaatataatttttttgaaattttgcatttt-ggtcctcacattttccacaattttcaaattgaccccc 6955291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 436 - 573
Target Start/End: Original strand, 11601088 - 11601226
Alignment:
Q  436 ggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatt 532  Q
    ||||||||||||||  ||||| ||||| ||| ||||||| ||||||||||| |||||||||||  ||| ||||| | || || |||||||||||||||||    
T  11601088 ggaattcaaataatttgaggtgaattttattatttggatgataatttgaagaattttcaaaattgtgg-aatttctgaagtattttgttcaagttaaatt 11601186  T
Q  533 tagagaatttcaaatgacacctaaaagttaagaatttcaaa 573  Q
    |||| ||||| |||| ||||||||||| |||||||||||||    
T  11601187 tagacaattt-aaattacacctaaaagctaagaatttcaaa 11601226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 563 - 675
Target Start/End: Complemental strand, 22305108 - 22304999
Alignment:
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatac 662  Q
    |||||||||| ||||||| ||| |||| ||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||  ||||||||||||| |      
T  22305108 agaatttcaacattcttcattgttatattttttcaaattttgcattttgg-tcctcaaattttccaaaattttcaatttga--ccccaataaatttttta 22305012  T
Q  663 aaaattgcaaatt 675  Q
    |||||||||||||    
T  22305011 aaaattgcaaatt 22304999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 675
Target Start/End: Original strand, 22302654 - 22302759
Alignment:
Q  567 tttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaa 666  Q
    |||||||||||||||||| |||||||||| ||||||| |||| | ||||||||||| ||||||| |||| |||||||  |||||||||||||  | ||||    
T  22302654 tttcaaaattcttcgttgttataatttttcaaattttgcattat-ggtcctcaaattttccaaattttttaatttga--ccccaataaatttccaaaaaa 22302750  T
Q  667 ttgcaaatt 675  Q
    |||||||||    
T  22302751 ttgcaaatt 22302759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 480
Target Start/End: Complemental strand, 40090489 - 40090389
Alignment:
Q  382 ttctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggataataatt 479  Q
    |||||| ||||||||||||||||| |||||||||||  |||||||| |||| | ||||||||||||   |||||| |||| |||||||||||||||||||    
T  40090489 ttctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattccattgtttggataataatt 40090390  T
Q  480 t 480  Q
    |    
T  40090389 t 40090389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 17492676 - 17492595
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaattta 508  Q
    |||| ||||||||||||||||  ||||| |||| |||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  17492676 ttttgagggaattcaaataatttgaggtgaattccattgtttggatgataatttgaagaattttcaaaatgatgaaaattta 17492595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 534
Target Start/End: Original strand, 22305158 - 22305244
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaattta 534  Q
    |||||| |||| ||||||||||||||||||||| || ||||||||||||| |||||||||| || || ||| |||||||||||||||    
T  22305158 tgaggtgaattccattgtttggataataatttgtagaattttcaaaatgaaggaaatttatgaagtattttattcaagttaaattta 22305244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 472
Target Start/End: Complemental strand, 25935370 - 25935273
Alignment:
Q  377 aaaaattctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || | ||| ||||||||||   |||||| |||| ||||||||||||    
T  25935370 aaaaattctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattccattgtttggat 25935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 508
Target Start/End: Original strand, 28490034 - 28490115
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaattta 508  Q
    |||| |||||||||||||| |  ||||| |||| |||||||||||||||||||||| | |||||||||||||||||||||||    
T  28490034 ttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaggaattttcaaaatgatggaaattta 28490115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 19533977 - 19533890
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||||| | ||||||||||| ||||||||| || | ||||||||||||||   |||||| |||||||||||||||||    
T  19533977 atagtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 19533890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 40809338 - 40809398
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  40809338 ctaagagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaa 40809398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 2316380 - 2316435
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  2316380 agtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaa 2316435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 444
Target Start/End: Complemental strand, 2721632 - 2721573
Alignment:
Q  385 taatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  2721632 taatagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 2721573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 580
Target Start/End: Original strand, 8255117 - 8255168
Alignment:
Q  529 aatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  8255117 aatttagagaatttcaaaagacacctaaaagttaagaatttcaaatttcttc 8255168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 434 - 547
Target Start/End: Complemental strand, 17444452 - 17444337
Alignment:
Q  434 agggaattcaaataatgaggtaaatttcattgtttggataataatttgaaggatttt-caaaatgatggaaatttataaaatatttgttca-agttaaat 531  Q
    |||||||| ||||| | |||||||||  |||||||||||||| ||||  || ||||| ||||||||||||||||||| || |||||  ||  ||||||||    
T  17444452 agggaatttaaatatttaggtaaattctattgtttggataatgatttagagaatttttcaaaatgatggaaatttatgaagtattttgtctgagttaaat 17444353  T
Q  532 ttagagaatttcaaat 547  Q
    ||||||||||||||||    
T  17444352 ttagagaatttcaaat 17444337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 20523290 - 20523235
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  20523290 agtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaa 20523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 15804453 - 15804399
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaatt 441  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  15804453 atagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 456 - 518
Target Start/End: Original strand, 22302593 - 22302655
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt 518  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||    
T  22302593 aattccattgtttggataataatttgaagatttttcaaaatgatggaaatttatgaagtattt 22302655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 31316242 - 31316324
Alignment:
Q  466 tttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    ||||||| ||||||||||| |||||  ||||||||||||||||| ||  | |||||| |||||||||||||||||||||||||    
T  31316242 tttggatgataatttgaagaattttttaaatgatggaaatttatgaagcattttgtttaagttaaatttagagaatttcaaat 31316324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 37722962 - 37722877
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||||| ||| ||||||| ||||||||| |||| ||||||||||||||   |||||| |||| ||||||||||||    
T  37722962 agtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 37722877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 612
Target Start/End: Original strand, 37090722 - 37090843
Alignment:
Q  492 aaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataa 590  Q
    |||||||||||| ||||| || |||||  ||||||||||||||| ||||||| |||  |||||||||| |||  ||||||||| |||||| ||  ||| |    
T  37090722 aaaatgatggaattttatgaagtattttattcaagttaaatttatagaattttaaaccacacctaaaaattagaaatttcaaatttcttcattattatga 37090821  T
Q  591 tttttaaaatttttcattttgg 612  Q
    ||||| ||||||| ||||||||    
T  37090822 tttttcaaattttacattttgg 37090843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 40643979 - 40643919
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  40643979 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 40643919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 15374117 - 15374062
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  15374117 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 15374062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 37145569 - 37145484
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    |||| |||||||||||| ||||||||||| ||||||||| || | || |||||||||||   |||||| |||||||||||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtgaatttcattgtttggat 37145484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 40809498 - 40809444
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattca 443  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| || |||||||    
T  40809498 agtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattca 40809444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 580
Target Start/End: Complemental strand, 21541534 - 21541445
Alignment:
Q  492 aaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    |||||||| ||||| ||| || ||||| || ||||||||||||||||||||||||||||||||||  |  || |||||||||| ||||||    
T  21541534 aaaatgattgaaatctatgaattattttgtacaagttaaatttagagaatttcaaatgacacctattatatacgaatttcaaatttcttc 21541445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 28828369 - 28828422
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattc 442  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 28828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 28828506 - 28828449
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||| |||||||||||    
T  28828506 atagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaa 28828449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 647
Target Start/End: Complemental strand, 9894070 - 9893987
Alignment:
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    |||| ||||||||||||| ||| |||||| ||| ||||||| |||||| |||||| || | || |||||||||||||||||||||    
T  9894070 agaaattcaaaattcttcattgttataatctttcaaattttgcatttt-ggtccttaattttttcaaaattttcaatttgacccc 9893987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 3563279 - 3563334
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||| ||| ||||||||||| ||||||||| |||| |||||||||||    
T  3563279 agtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaa 3563334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 9764495 - 9764440
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||| ||| ||||||||| |||| |||||||||||    
T  9764495 agtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaa 9764440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 15804324 - 15804379
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||| | |||| |||||||||||    
T  15804324 agtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaa 15804379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 20523135 - 20523190
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||  ||||||||||| |||||||||||| | |||||||||||    
T  20523135 agtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaa 20523190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 26281337 - 26281282
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| || |||||||| ||||||||| |||| |||||||||||    
T  26281337 agtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaa 26281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 32389974 - 32390029
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||| || ||||||||||  |||||||||||||| |||||||||||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaa 32390029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 633
Target Start/End: Complemental strand, 37241030 - 37240960
Alignment:
Q  562 aagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaatt 633  Q
    |||||||||||| |||||| ||| |||||||||| | ||||| |||||| ||||||||||| ||||||||||    
T  37241030 aagaatttcaaatttcttcattgttataatttttcacattttgcatttt-ggtcctcaaattttccaaaatt 37240960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 20320716 - 20320658
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    ||||||||||||||    ||||||||||  |||||||||||||||||||||||||||||    
T  20320716 agtgtgtttggatgaatgaatgttttgaaggaatgtaatattttaagggaattcaaata 20320658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 8255060 - 8255121
Alignment:
Q  420 aatgtaatattttaagggaattcaaataatg-aggtaaatttcattgtttggataataattt 480  Q
    |||||||| |||| |||||||||||||| |  |||| |||||||||||||||||||||||||    
T  8255060 aatgtaatgttttgagggaattcaaatattttaggtgaatttcattgtttggataataattt 8255121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 9894121 - 9894060
Alignment:
Q  486 attttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaa 546  Q
    |||||||||||||||| ||||||| || ||||| |||||||||||||||| |||| ||||||    
T  9894121 attttcaaaatgatgggaatttatgaagtattttgttcaagttaaatttatagaaattcaaa 9894060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 5658773 - 5658821
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatatttt 432  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  5658773 ctaagagtgtgtttggatggagaaatgttttgagggaatgtaatgtttt 5658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 9764335 - 9764395
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||| ||| ||||||| ||| ||||| |||| |||||||||||    
T  9764335 ctaagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 9764395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 647
Target Start/End: Complemental strand, 24402724 - 24402599
Alignment:
Q  523 aagttaaatttagagaatttc-aaatgacacctaaaagttaagaattt--caaaattcttcgttgctataatttttaaaatttttcattttgggtcctca 619  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||   ||| || ||| ||  |||||||||| || |||| || |||| |||||||    
T  24402724 aagttaaatttagagaatttcaaaatgacacataaaagctaagaatttactaaatttattcattcttataattttt-aagttttaca-tttgtgtcctca 24402627  T
Q  620 aatgttccaaaattttcaatttgacccc 647  Q
     || ||| ||||||||||| ||||||||    
T  24402626 tattttcgaaaattttcaaattgacccc 24402599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 32470879 - 32470939
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||| ||||||||| ||||||||||||| ||||||||| |||| | |||||||||    
T  32470879 ctaagagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaa 32470939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 580
Target Start/End: Complemental strand, 41150334 - 41150206
Alignment:
Q  454 taaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatt-tataaaatatttgttc-aagttaaatttagagaatttcaaatgaca 551  Q
    ||||||||||| ||| ||| |||||||| || ||||| ||||||||  ||||| ||  || |||||  || |||||||||||||| |||||||||| | |    
T  41150334 taaatttcattatttcgatgataatttggagaatttttaaaatgattaaaattgtaataactattttgtcgaagttaaatttagaaaatttcaaattata 41150235  T
Q  552 cctaaaagttaagaatttcaaaattcttc 580  Q
    ||||||| |||| | ||||||| ||||||    
T  41150234 cctaaaatttaaaattttcaaatttcttc 41150206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 23092119 - 23092064
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||| ||||| |||||    
T  23092119 agtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaa 23092064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 622
Target Start/End: Complemental strand, 33995781 - 33995712
Alignment:
Q  552 cctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||| ||||||||||| ||||||||| | |  ||| ||||| |||||||||||||| |||||||||||    
T  33995781 cctaaaaattaagaatttcgaaattcttcatcgtaatattttttcaaatttttcatttt-ggtcctcaaat 33995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 6634011 - 6634072
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| |||||||||||||||||  || |||||||  |||||||| |||| |||||||||||    
T  6634011 tctaagagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaa 6634072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 16515181 - 16515120
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| |||||||||||||| |  |||||||| || ||||||||| |||| |||||||||||    
T  16515181 tctaagagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaa 16515120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 34982213 - 34982272
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||| ||| ||||||||||| |||||| || |||| |||||||||||    
T  34982213 ctaagagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattcaa 34982272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 2e-81; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 383 - 675
Target Start/End: Complemental strand, 14603325 - 14603033
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataattt 480  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | |||||||| ||||||||||||||||||||    
T  14603325 tctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttggataataattt 14603226  T
Q  481 gaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattctt 579  Q
    |||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  14603225 gaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttctt 14603126  T
Q  580 cgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | ||| | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  14603125 cattgttgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 14603033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 35455806 - 35456092
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | |||||||| |||||||||||||||||||||||| |    
T  35455806 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttggataataatttgaagca 35455905  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||     
T  35455906 ttttcaaaatgatggaaatttatgaagtattttgttgaagttaaatttagagaattttaaatgacacctaaaagctaagaatttcaaatttcttcattgt 35456005  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  35456006 tgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 35456092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 22391644 - 22391361
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||| ||| |  ||||||||||| ||||||||| |||| || ||||| ||||| |  ||||| ||||||||||||||||||||||||| ||| |    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatttaaatattttgaggtgaatttcattgtttggataataatttaaagaa 22391545  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    |||| |||||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22391544 tttt-aaaatgatggaaatttctgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgt 22391446  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||| ||| | ||||||| |||||| ||||||||||| |||||||||||||||||||   ||||||||||||| || |||||||||||||    
T  22391445 tatattttatcaaattttgcatttt-ggtcctcaaattttccaaaattttcaatttg---ccccaataaattttta-aaaattgcaaatt 22391361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 429 - 675
Target Start/End: Complemental strand, 13815011 - 13814765
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  || || |||| |||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||    
T  13815011 ttttgagggaattcaaatactttgatgtgaattccattatttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 13814912  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||| |||||||||| ||| ||||||||||| ||    
T  13814911 ttaaatttaaagaatttcaaatgacatctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttttcaattt-ggtcctcaaatttt 13814813  T
Q  626 ccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| |||||    
T  13814812 ccaaaattttcaatttga--cccctataaatttataaaaaattgaaaatt 13814765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 28539225 - 28538939
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | |||| |||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  28539225 agtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagca 28539126  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||     
T  28539125 ttttcaaaatgatggaaatttatgaagtattttgtttaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgt 28539026  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||| | || ||||| |||||| ||||  |||||| ||||||  | |||||||||||||    
T  28539025 tgttatttttcatattttgcatttt-ggtcctcaattttttcaaaaatttcaaattga--ccccaaaaaatttccaaaaaattgcaaatt 28538939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 462 - 675
Target Start/End: Original strand, 40495307 - 40495517
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  40495307 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagt 40495406  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttat 660  Q
    |||||||||||||||||||| ||| ||||| |||| ||||||| || ||| ||||||||||  ||||||||||||||||||||  |||| ||||||||||    
T  40495407 taagaatttcaaaattcttcattgttataaattttcaaattttgcaattt-ggtcctcaaactttccaaaattttcaatttga--cccctataaatttat 40495503  T
Q  661 acaaaattgcaaatt 675  Q
    | |||||||||||||    
T  40495504 a-aaaattgcaaatt 40495517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 391 - 675
Target Start/End: Original strand, 30629061 - 30629346
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    ||||||||||||||| ||||||||||| ||||||| | ||||||| ||||| ||||| |  | ||| |||||||||||||||||||||||||||||||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagagaatttaaatactttggggtgaatttcattgtttggataataatttgaaggatt 30629160  T
Q  489 ttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct- 586  Q
    ||||||||||||||||||||| || || ||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||||| ||| |     
T  30629161 ttcaaaatgatggaaatttatgaagtatttttttcaagttaaatttagaaaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgttg 30629260  T
Q  587 ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     || ||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  ||| |||||||||| | |||||||||||||    
T  30629261 ttattttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccctaataaatttacaaaaaattgcaaatt 30629346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 39342699 - 39342422
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  39342699 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagca 39342600  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||| |||     
T  39342599 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatttattcattg- 39342501  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
         || ||   |||||||||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  39342500 -----ttgtt---atttttcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 39342422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 23548668 - 23548382
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||||||||||| ||||||| | |||| ||| |||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  23548668 agtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtgaattccattgtttggataataatttgaagca 23548569  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||| ||||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||| |||     
T  23548568 ttttcaaaatgatagaaatttatgaagtattttgttcaagttaaatttagaaaatttcaaatgacacctaaaagctaagaattttaaatttcttcattgt 23548469  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  ||| |||||||||  | |||||||||||||    
T  23548468 tgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccctaataaatttccaaaaaattgcaaatt 23548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 429 - 646
Target Start/End: Original strand, 14790155 - 14790374
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  ||||| ||||| ||| ||||||||||||||| ||| ||||| ||||||||| ||||||||||| ||||| |||||||    
T  14790155 ttttgagggaattcaaatactttgaggtgaattttattatttggataataatttaaagaatttttaaaatgatgaaaatttataaagtattttgttcaag 14790254  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||  |||| ||||| ||||||| |||||| |||| |||||| ||    
T  14790255 ttgaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaaattttcattcttatattttttcaaattttgcatttt-ggtcttcaaatttt 14790353  T
Q  626 ccaaaattttcaatttgaccc 646  Q
    |||||||||||||||||||||    
T  14790354 ccaaaattttcaatttgaccc 14790374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 389 - 645
Target Start/End: Original strand, 30524257 - 30524515
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatgaggta--aatttcattgtttggataataatttgaagga 486  Q
    ||||||| ||||||| | ||||||||||  ||||||||| |||| |||||||||||||| |  || |  ||||||||||||||||||||||||||||  |    
T  30524257 agtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaaatactttgggatgaatttcattgtttggataataatttgaaata 30524356  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    |||| |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |||||| |||     
T  30524357 tttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaaagctaagaattttaaatttcttcattgt 30524456  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacc 645  Q
    | | |||||| | ||||| |||||| |||||| |||| |||||||| |||||| ||||||    
T  30524457 tgttatttttcatattttgcatttt-ggtccttaaattttccaaaaatttcaaattgacc 30524515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 449 - 631
Target Start/End: Original strand, 26416017 - 26416199
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||  || ||||| |||||||| ||||||||||||||| ||||    
T  26416017 tgaggtgaatttcatggtttggataataatttgaagaattttcaaaatgatggaaatttaggaagtattttgttcaagtcaaatttagagaatttgaaat 26416116  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaa 631  Q
    |||||||||||| ||||||||||||| |||||| ||| ||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  26416117 gacacctaaaagctaagaatttcaaatttcttcattgttataatttttcgaatttttcatttt-ggtcctcaaattttccaaaa 26416199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 429 - 675
Target Start/End: Original strand, 40495759 - 40496005
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  | ||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||    
T  40495759 ttttgagggaattcaaatattttggggtgaattccattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgttcaag 40495858  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||| | | |||||| | |||||||||||| |||||||| || ||    
T  40495859 ttaaatttagagaatttcaaatgacacctaaaagctaagaattttaaatttcttcattgttgttatttttcatatttttcatttt-ggtcctcatatttt 40495957  T
Q  626 ccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||||| |||||| ||||  |||||| ||||||  | |||||||||||||    
T  40495958 ccaaaaatttcaaattga--ccccaaaaaatttccaaaaaattgcaaatt 40496005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 456 - 675
Target Start/End: Original strand, 40667412 - 40667625
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||||    
T  40667412 aatttcattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacct 40667511  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataa 654  Q
    ||||| ||||||||||||| |||||| ||| | | |||||| | ||||| |||||| |||||||||    ||||||| |||||| ||||  |||||| ||    
T  40667512 aaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcatttt-ggtcctcaa----tccaaaaatttcaaattga--ccccaaaaa 40667604  T
Q  655 atttatacaaaattgcaaatt 675  Q
    ||||  | |||||||||||||    
T  40667605 atttccaaaaaattgcaaatt 40667625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 456 - 622
Target Start/End: Complemental strand, 30587891 - 30587725
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||| |||||||||||    
T  30587891 aattccattgtttggataatagtttgaagtattttcaaaatgatggaaatttatgaagtattttgttcaagtcaaatttagagaattttaaatgacacct 30587792  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||| ||||||||||||||||| || ||| |||||||||| ||||||| |||||| |||||||||||    
T  30587791 aaaagctaagaatttcaaaattcatcattgttataatttttcaaattttgcatttt-ggtcctcaaat 30587725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 389 - 647
Target Start/End: Complemental strand, 25189283 - 25189022
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| || |||||||||||  |||| ||| |||| |||||||||||||| |  || || ||||||||||||||||| ||||||||||| |    
T  25189283 agtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttgaagtgaatttcattgtttggatgataatttgaagaa 25189184  T
Q  487 ttttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||  || || |||||||||||||||||||||||||||||| ||||| ||||||  ||| ||||||||  || ||| |||     
T  25189183 ttttcaaaatgatggaaatttacgaagtattttgttcaagttaaatttagagaatttcaagtgacatctaaaaactaataatttcaattttattcattgt 25189084  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaa-tgttccaaaattttcaatttgacccc 647  Q
    | |||||||| || |||||| |||| |||||||||| | |||||||| || ||| ||||||||    
T  25189083 tgtaatttttcaattttttc-tttttggtcctcaaatttttccaaaaattccaaattgacccc 25189022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 466 - 675
Target Start/End: Complemental strand, 41443078 - 41442866
Alignment:
Q  466 tttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagtta----aatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||    |||||| ||||||| ||| ||||| |||||||    
T  41443078 tttggataataatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaagttagttaaatttaaagaattttaaacgacacttaaaagt 41442979  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttat 660  Q
    |||||||||||||||||||| ||| || ||||||| ||||||| |||||| || |||||||| | ||||||||||||||||||  |  ||||||||||||    
T  41442978 taagaatttcaaaattcttcattgttaaaatttttcaaattttgcatttt-ggccctcaaatttcccaaaattttcaatttga--ctgcaataaatttat 41442882  T
Q  661 -acaaaattgcaaatt 675  Q
     | |||||||||||||    
T  41442881 aaaaaaattgcaaatt 41442866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 647
Target Start/End: Complemental strand, 19865549 - 19865349
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||| ||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||    
T  19865549 tgaggtgaatttcattgttttgataataatttaaagaattttcaaaatgatggtaatttatgaagtattttgttcaagttaaatttagagaatttcaaat 19865450  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctata--atttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacc 645  Q
    ||||||||||| || ||||||| |||||||||| ||| ||||   ||||| ||||||| |||||| ||||| ||||| || |||||  ||||||||||||    
T  19865449 gacacctaaaaattcagaattttaaaattcttcattgttatattttttttcaaattttgcatttt-ggtccccaaatttttcaaaaaattcaatttgacc 19865351  T
Q  646 cc 647  Q
    ||    
T  19865350 cc 19865349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 389 - 554
Target Start/End: Complemental strand, 9784988 - 9784820
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||||||||||| ||||||| | |||| |||||||||||||| |  | ||| || | |||||||||||||||||||||||| |    
T  9784988 agtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaaatccattgtttggataataatttgaagca 9784889  T
Q  487 ttttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||    
T  9784888 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacct 9784820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 391 - 546
Target Start/End: Complemental strand, 23455302 - 23455144
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    |||||||||||| || ||||||||||| ||||||| | |||| |||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcatt 23455203  T
Q  489 ttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaa 546  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||||||||||||    
T  23455202 ttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaa 23455144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 451 - 580
Target Start/End: Complemental strand, 30080794 - 30080664
Alignment:
Q  451 aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatga 549  Q
    |||| |||| |||||||||||| ||||||||||| |||||||||||||||||||||||| || ||||| ||| |||||||||||||| ||||||||||||    
T  30080794 aggtgaattccattgtttggatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtttaagttaaatttagaaaatttcaaatga 30080695  T
Q  550 cacctaaaagttaagaatttcaaaattcttc 580  Q
    ||||||||||||||| |||||||| ||||||    
T  30080694 cacctaaaagttaagtatttcaaatttcttc 30080664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 407 - 604
Target Start/End: Complemental strand, 3905698 - 3905498
Alignment:
Q  407 aatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaa 504  Q
    |||||||||||  ||  |||| |||| | |||||||||||| |  ||||| ||||  ||||||||||||||||||||||| ||||||||||||||| |||    
T  3905698 aatgttttgaggaaaaataatgttttcaaggaattcaaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaa 3905599  T
Q  505 tttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttt 603  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||| | ||||| || |||||||||| |||||  ||  ||||||||  ||||||||    
T  3905598 tttatgaattattttgttcaagttaaatttagagaatttcaaatgacagcaaaaagctaggaatttcaaatttctttattaatataatttcaaaaatttt 3905499  T
Q  604 t 604  Q
    |    
T  3905498 t 3905498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 392 - 547
Target Start/End: Original strand, 43791097 - 43791253
Alignment:
Q  392 gtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattt 489  Q
    ||||||||||| ||||| |||  ||| ||||||||| |||| |||||||||||||| |  ||||| || | |||||||||||||||||||||||| ||||    
T  43791097 gtgtttggatgaggaaaagtt--gagggaatgtaatgttttgagggaattcaaatactttgaggtgaactccattgtttggataataatttgaagaattt 43791194  T
Q  490 tcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||||||||||||    
T  43791195 tcaaaatgatggaaatttaataagtatttggttcaagttaaatttagagaatttcaaat 43791253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 451 - 643
Target Start/End: Original strand, 45967013 - 45967205
Alignment:
Q  451 aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatga 549  Q
    |||| ||||| ||||||||||| |||||||  || ||||| ||||||||| |||||||| |||||||| |||||||||||||||| ||||||||||| ||    
T  45967013 aggtgaattttattgtttggatgataattttgagaatttttaaaatgatgaaaatttatgaaatattttgttcaagttaaatttaaagaatttcaaacga 45967112  T
Q  550 cacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttga 643  Q
    || ||||||  ||||||||||||| || ||| ||  |||||||||| ||| ||| |||||| ||| |||| || ||||||||||||||| ||||    
T  45967113 caactaaaaactaagaatttcaaatttattcattcttataatttttcaaagtttgcatttt-ggttctcatattttccaaaattttcaaattga 45967205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 429 - 645
Target Start/End: Original strand, 45984382 - 45984604
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    ||||||||||||||||||| |  ||||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||    
T  45984382 ttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 45984481  T
Q  526 ttaaatttagagaa-----tttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaa 620  Q
    |||||||||||| |     |||||||||||||||||||   ||||| |||||||   ||  ||| | |||||||| ||| ||| |||||| ||||| |||    
T  45984482 ttaaatttagagtagagagtttcaaatgacacctaaaaaccaagaaattcaaaaaatttaattgttttaattttttaaaatttgcatttt-ggtcc-caa 45984579  T
Q  621 atgttccaaaattttcaatttgacc 645  Q
    || ||||||||  ||||||||||||    
T  45984580 attttccaaaaaattcaatttgacc 45984604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 429 - 645
Target Start/End: Original strand, 45988742 - 45988964
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    ||||||||||||||||||| |  ||||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||    
T  45988742 ttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 45988841  T
Q  526 ttaaatttagagaa-----tttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaa 620  Q
    |||||||||||| |     |||||||||||||||||||   ||||| |||||||   ||  ||| | |||||||| ||| ||| |||||| ||||| |||    
T  45988842 ttaaatttagagtagagagtttcaaatgacacctaaaaaccaagaaattcaaaaaatttaattgttttaattttttaaaatttgcatttt-ggtcc-caa 45988939  T
Q  621 atgttccaaaattttcaatttgacc 645  Q
    || ||||||||  ||||||||||||    
T  45988940 attttccaaaaaattcaatttgacc 45988964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 574
Target Start/End: Complemental strand, 36328774 - 36328664
Alignment:
Q  466 tttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttc-aagttaaatttagagaatttcaaatgacacctaaaagttaa 563  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| || ||||| |||| |||||||||| |||||||||||||||||||||||||| |||    
T  36328774 tttggataataatttgaagaattttcaaaatgatggtaatttatgaagtattttgttctaagttaaattcagagaatttcaaatgacacctaaaagctaa 36328675  T
Q  564 gaatttcaaaa 574  Q
    |||||| ||||    
T  36328674 gaattttaaaa 36328664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 391 - 637
Target Start/End: Original strand, 15990895 - 15991141
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    ||||||||||| | | ||| |||||||  |||||||| | || | |||||||||||| |  ||| |||||| |||||||||||| |||||||  || |||    
T  15990895 tgtgtttggattgagtaatattttgaggtaatgtaatgtcttgaaggaattcaaatactttgagataaattgcattgtttggatgataatttagagtatt 15990994  T
Q  489 ttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctat 588  Q
    ||||||||||||||||||||| || ||||| |  ||||||||| |||| |||||||||| | || ||||||||||||||||  || |||||| ||  ||     
T  15990995 ttcaaaatgatggaaatttatgaagtattt-tgtaagttaaatgtagaaaatttcaaatcatacataaaagttaagaattttcaatttcttcattcttaa 15991093  T
Q  589 aatttttaaaatttttcattttgggtcctcaaatgttccaaaattttca 637  Q
    | ||||| ||| ||| |||||| |||||||| || ||||||||||||||    
T  15991094 atttttttaaaatttccatttt-ggtcctcacattttccaaaattttca 15991141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 429 - 546
Target Start/End: Original strand, 32650615 - 32650735
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaag 525  Q
    |||| |||||||||||||| |  ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || || ||| ||||||    
T  32650615 ttttgagggaattcaaatactttgaggtgaattttattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttttttcaag 32650714  T
Q  526 ttaaatttagagaatttcaaa 546  Q
    ||||||||||| |||||||||    
T  32650715 ttaaatttagataatttcaaa 32650735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 463 - 595
Target Start/End: Original strand, 33310882 - 33311015
Alignment:
Q  463 ttgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagtt 561  Q
    ||||||||||| ||||||| ||  ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||  |    
T  33310882 ttgtttggatagtaatttgtagagttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttaaaatgacacctaaaacct 33310981  T
Q  562 aagaatttcaaaattcttcgttgctataattttt 595  Q
    |  ||||||||| |||||| ||| |||| |||||    
T  33310982 ataaatttcaaatttcttccttgttatatttttt 33311015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 456 - 595
Target Start/End: Complemental strand, 18926809 - 18926674
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||| ||||||||||  | |||||||||||||||||||||| || || ||||||||||||||||||||||     ||| ||||||||    
T  18926809 aatttcattgtttggatgataatttgaaaaaatttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagag-----caattgacacct 18926715  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataattttt 595  Q
    |||||||||||||||| || |||||| | | ||||||||||    
T  18926714 aaaagttaagaatttcgaatttcttcatggttataattttt 18926674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 456 - 547
Target Start/End: Original strand, 42816620 - 42816712
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||    
T  42816620 aattccattgtttggataataatttgaagcattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaat 42816712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 487 - 612
Target Start/End: Complemental strand, 18938969 - 18938843
Alignment:
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||| ||||||||| || ||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||   ||  ||      
T  18938969 ttttcaaaatgatagaaatttatgaagtattttgttcaaattaaatttagagaatctcaaatgacacctaaaagttaagaatttcaaaaaatttaattct 18938870  T
Q  586 tataatttttaaaatttttcattttgg 612  Q
    |||||||||| ||||||| ||||||||    
T  18938869 tataatttttcaaattttacattttgg 18938843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 622
Target Start/End: Original strand, 23695979 - 23696143
Alignment:
Q  458 tttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaa 556  Q
    ||||||||||  ||| |||||||| || ||||| |||| |||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||| ||||    
T  23695979 tttcattgttaagatgataatttggagaatttttaaaacgatgaaaatttataaagtattttgttcaagttaaatttagaaaatttcaaatgacatctaa 23696078  T
Q  557 aagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||| ||||||||| ||| |||||| ||  |||  ||||  ||||||| |||||| |||||||||||    
T  23696079 aagctaagaatttgaaatttcttcattcttatcgttttacaaattttgcatttt-ggtcctcaaat 23696143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 537 - 675
Target Start/End: Original strand, 2411465 - 2411600
Alignment:
Q  537 gaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttc 636  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| | | |||||| | ||||| |||||| ||||||||||| |||||||| ||||    
T  2411465 gaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttattttttatattttgcatttt-ggtcctcaaattttccaaaaatttc 2411563  T
Q  637 aatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    || ||||   ||||||||||||  | |||||||||||||    
T  2411564 aaattga--acccaataaatttccaaaaaattgcaaatt 2411600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 389 - 501
Target Start/End: Complemental strand, 18789303 - 18789189
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||| |||||||||||| |||| || | |||||||||||||| |   |||| |||| |||||||||||||||||||||||| |    
T  18789303 agtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatactttaaggtgaattccattgtttggataataatttgaagaa 18789204  T
Q  487 ttttcaaaatgatgg 501  Q
    |||||||||||||||    
T  18789203 ttttcaaaatgatgg 18789189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 379 - 469
Target Start/End: Original strand, 31632714 - 31632806
Alignment:
Q  379 aaattctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttg 469  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||||| || | ||||||||||||||   |||||| |||| |||||||||    
T  31632714 aaattctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 31632806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 644
Target Start/End: Original strand, 46700356 - 46700463
Alignment:
Q  536 agaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaatttt 635  Q
    ||||||||||||  || ||||||| ||||||||| |||||||||| ||| |||||| ||| ||||||| |||||| ||||||||| | || |||||||||    
T  46700356 agaatttcaaatagcatctaaaaggtaagaattttaaaattcttcattgttataatcttttaaattttgcatttt-ggtcctcaattttttcaaaatttt 46700454  T
Q  636 caatttgac 644  Q
     ||||||||    
T  46700455 taatttgac 46700463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 26162194 - 26162109
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||||| ||||||||||| ||||||||| || | ||||||||||||||   |||||| |||| ||||||||||||    
T  26162194 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 26162109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 580
Target Start/End: Complemental strand, 34114539 - 34114486
Alignment:
Q  527 taaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  34114539 taaatttagagaatttcaaatgacatctaaaagttaggaatttcaaatttcttc 34114486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 43955673 - 43955616
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  43955673 atagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 43955616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 2057392 - 2057452
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  2057392 ctaagagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaa 2057452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 5976499 - 5976451
Alignment:
Q  525 gttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaa 573  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  5976499 gttaaatttagagaatttcaaatgacacctaaaatttaataatttcaaa 5976451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 40110900 - 40110840
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||| |||| |||||||||||    
T  40110900 ctaagagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaa 40110840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 43955514 - 43955574
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  43955514 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 43955574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 40110739 - 40110794
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  40110739 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 40110794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 6498822 - 6498764
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  6498822 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaata 6498764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 501
Target Start/End: Original strand, 18789544 - 18789633
Alignment:
Q  414 tgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatgg 501  Q
    |||||||||||||| ||   |||||||||||||| |  ||||| |||| |||||||| ||||||||||||||| ||||| ||||||||||    
T  18789544 tgagagaatgtaatgttacgagggaattcaaatactttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgg 18789633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 40854132 - 40854079
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaaggg 437  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  40854132 ctaagagtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggg 40854079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 675
Target Start/End: Original strand, 42816701 - 42816810
Alignment:
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatac 662  Q
    ||||||||||| |||||| ||| | | |||||| | |||||||||||| ||||||||| | |||||||| |||||| ||||  |||||||||||||  |     
T  42816701 agaatttcaaatttcttcattgttgttatttttcatatttttcatttt-ggtcctcaagttttccaaaaatttcaaattga--ccccaataaatttccaa 42816797  T
Q  663 aaaattgcaaatt 675  Q
    |||||||||||||    
T  42816798 aaaattgcaaatt 42816810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 447
Target Start/End: Complemental strand, 35777018 - 35776954
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    ||||| |||||||||||||| || ||||||||||| ||||||||| || | ||||||||||||||    
T  35777018 tctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaata 35776954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 601
Target Start/End: Complemental strand, 37460889 - 37460749
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||| ||||||   |||| ||||| ||  ||||||||||| ||||| ||| | |||||||||||| |||||||||| ||| ||||||      
T  37460889 attgtttggataatattttgaaatttttttaaaataatataaatttataaagtattttgttgatgttaaatttagaaaatttcaaatcacatctaaaaac 37460790  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatt 601  Q
    || |||||| ||| |||||  ||| ||||| |||| |||||    
T  37460789 tacgaattttaaatttctttattgttataaattttcaaatt 37460749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 5644673 - 5644734
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| |||||||||| |||| | ||||||||||| ||||||||| |||| |||||||||||    
T  5644673 tctaagagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 5644734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 565 - 622
Target Start/End: Original strand, 32650727 - 32650783
Alignment:
Q  565 aatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    |||||||||||||||| ||| |||||||||| ||||||| |||||| |||||||||||    
T  32650727 aatttcaaaattcttcattgttataatttttcaaattttgcatttt-ggtcctcaaat 32650783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 675
Target Start/End: Complemental strand, 9784820 - 9784716
Alignment:
Q  568 ttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaat 667  Q
    |||||| |||||| ||| | | |||||| | ||||| |||||||| ||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||    
T  9784820 ttcaaatttcttcattgttgttattttttatattttgcattttgg-tcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaat 9784724  T
Q  668 tgcaaatt 675  Q
    ||||||||    
T  9784723 tgcaaatt 9784716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 21636038 - 21635990
Alignment:
Q  393 tgtttggatggggaaatgttttgagagaatgtaatattttaagggaatt 441  Q
    ||||||||||||||||||||||||| ||||||||| |||| | ||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatt 21635990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 34399006 - 34398950
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagg-gaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| ||| ||||||||    
T  34399006 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaa 34398950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 2057552 - 2057497
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||| ||||||| ||| ||||| |||| |||||||||||    
T  2057552 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 2057497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 5644834 - 5644779
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| || ||||||||  |||||||| |||| |||||||||||    
T  5644834 agtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaa 5644779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 29065821 - 29065876
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||||   ||||||||||| ||||||||| |||| |||||||||||    
T  29065821 agtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaa 29065876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 34388422 - 34388367
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||| |||  | ||||||||||| |||||||||||||| |||||||||||    
T  34388422 agtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaa 34388367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 36328838 - 36328804
Alignment:
Q  388 tagtgtgtttggatggggaaatgttttgagagaat 422  Q
    |||||||||||||||||| ||||||||||||||||    
T  36328838 tagtgtgtttggatggggtaatgttttgagagaat 36328804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 574
Target Start/End: Complemental strand, 34037845 - 34037765
Alignment:
Q  494 aatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaa 574  Q
    |||||||||||||||| || ||| | ||| | |||||||||| ||| |||||||| |||| |||||||||||||||| ||||    
T  34037845 aatgatggaaatttatgaagtatctagtttatgttaaatttaaaga-tttcaaataacacataaaagttaagaatttaaaaa 34037765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 512
Target Start/End: Complemental strand, 9887015 - 9886955
Alignment:
Q  452 ggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaa 512  Q
    |||||| |||||||||||||  ||||||||||   |||| ||| |||||||||||||||||    
T  9887015 ggtaaagttcattgtttggaagataatttgaaatttttttaaattgatggaaatttataaa 9886955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 1e-80; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 384 - 675
Target Start/End: Complemental strand, 42006028 - 42005737
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| |||| | |||||| |||||   |||||| ||||||||||||||| ||||| ||||    
T  42006028 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatttaaataccttgaggtgaatttcattgtttgggtaatagtttg 42005929  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| ||||||||||||||| |||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42005928 aagaattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 42005829  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     |||  ||  ||||| ||||||| |||||| ||||||||||  ||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  42005828 attgtcatgttttttcaaattttacatttt-ggtcctcaaactttccaaaattttcaatttga--ccccaataaatttataaaaaattgcaaatt 42005737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 37054396 - 37054681
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| |||||||| || ||||||||| |||| | ||||||||||||   |||||| ||||||||||||||| ||||| ||||||| |    
T  37054396 agtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaa 37054495  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||     
T  37054496 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaaatcttcattgt 37054595  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     ||| ||||| ||||||| |||||| ||||||||||  ||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  37054596 catattttttcaaattttacatttt-ggtcctcaaactttccaaaattttcaatttga--ccccaataaatttata-aaaattgcaaatt 37054681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 36398059 - 36397773
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | |||| |||||||||||||| |  | ||| |||| ||||||| |||||||||||||||| |    
T  36398059 agtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgttcggataataatttgaagca 36397960  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||     
T  36397959 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgt 36397860  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||||| ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  36397859 tgttatttttaatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 36397773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 407 - 675
Target Start/End: Original strand, 7976568 - 7976836
Alignment:
Q  407 aatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaa 504  Q
    ||||||||||  ||||||||| |||| | |||||| |||||   |||||| ||||  ||||||||||||||||||| ||| ||||| |||||||||||||    
T  7976568 aatgttttgaaggaatgtaatgttttgaaggaatttaaatacattgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatggaaa 7976667  T
Q  505 tttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttt 603  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||    
T  7976668 tttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaatttt 7976767  T
Q  604 tcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     |||||| ||||||||||| ||||||| ||||||||||||  || |||||||||| || ||||||| |||||    
T  7976768 gcatttt-ggtcctcaaattttccaaatttttcaatttga--ccacaataaatttttaaaaaattgaaaatt 7976836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 384 - 675
Target Start/End: Original strand, 34088568 - 34088859
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||| ||||||||||||| ||||||| | |||| |||||||||||||| |  | ||| |||| ||||||| |||||||||||||    
T  34088568 ctaagagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgttaggataataatttg 34088667  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| |||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  34088668 aagcattttcaaaatgatggaaatttatgaagtattttgttcaaattaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttc 34088767  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     ||  | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  34088768 attattgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttcaaaaaaattgcaaatt 34088859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 389 - 621
Target Start/End: Original strand, 47767434 - 47767668
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| | ||||||||||||   |||||| |||| |||||||||||||||| ||||||| |    
T  47767434 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattacattgtttggataatagtttgaagaa 47767533  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  47767534 ttttcaaaatgatggaaatttatgaagtattttgttcaaattaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgt 47767633  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaa 621  Q
     ||| ||||| ||||||| |||||| ||||||||||    
T  47767634 catattttttcaaattttccatttt-ggtcctcaaa 47767668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 382 - 638
Target Start/End: Complemental strand, 53129920 - 53129662
Alignment:
Q  382 ttctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatt 479  Q
    |||||| |||||||||||||| || ||||||| ||| ||||||||| ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||    
T  53129920 ttctaagagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattccattgtttggataataatt 53129821  T
Q  480 tgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattct 578  Q
    ||||| ||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  53129820 tgaagtattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttct 53129721  T
Q  579 tcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
    || ||| | | |||||| | ||||| |||||| ||||||||||  |||||||| ||||||    
T  53129720 tcattgttgttatttttcatattttgcatttt-ggtcctcaaaatttccaaaaatttcaa 53129662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 53470499 - 53470212
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| |||||||||||||| |||| || | |||| |||||||||||||| |  | ||| ||||||||||||||||||||||||||||| |    
T  53470499 agtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtgaatttcattgtttggataataatttgaagca 53470400  T
Q  487 ttttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||| |||     
T  53470399 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaactaagaattttaaatttcttcattgt 53470300  T
Q  586 t-ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |  || ||||| | ||||| |||||| ||||||||||| || ||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  53470299 tgttattttttcatattttgcatttt-ggtcctcaaatttttcaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 53470212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 462 - 675
Target Start/End: Original strand, 2104811 - 2105021
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  2104811 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagt 2104910  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttat 660  Q
    |||||| ||||||||||||| ||| |||||||| | ||||||| |||||| || |||||||  ||||||||||||||||||||  |||||||||||||||    
T  2104911 taagaaattcaaaattcttcattgttataatttatcaaattttgcatttt-ggccctcaaaatttccaaaattttcaatttga--ccccaataaatttat 2105007  T
Q  661 acaaaattgcaaatt 675  Q
    | |||||| ||||||    
T  2105008 a-aaaattccaaatt 2105021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 459 - 647
Target Start/End: Complemental strand, 6837057 - 6836869
Alignment:
Q  459 ttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaa 557  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||  |||| |||||||||||||||||||||||||||||||||||||||    
T  6837057 ttcattgtttgaataataatttgaagaattttcaaaatgatagaaatttatgaagcattttgttcaagttaaatttagagaatttcaaatgacacctaaa 6836958  T
Q  558 agttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    | ||||||||| ||||||||||| ||| ||||||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6836957 aattaagaattacaaaattcttcattgttataattgttcaaatttttcatttt-ggtcctcaaattttccaaaattttcaatttgacccc 6836869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 389 - 638
Target Start/End: Original strand, 48947607 - 48947858
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||||   ||||||||||| ||||||| | |||| || ||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  48947607 agtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtgaattccattgtttggataataatttgaagca 48947706  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||     
T  48947707 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgt 48947806  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
    | | |||||| | ||||| |||||| ||||||||||| |||||||| ||||||    
T  48947807 tgttatttttcatattttccatttt-ggtcctcaaattttccaaaaatttcaa 48947858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 407 - 675
Target Start/End: Original strand, 30766573 - 30766841
Alignment:
Q  407 aatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaa 504  Q
    ||||||||||| ||||||||| |||| | ||||||||||||   |||||| |||| |||||||||||||||| ||||||| |||||||||| ||| ||||    
T  30766573 aatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaaagatagaaa 30766672  T
Q  505 tttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttt 603  Q
    ||||| || ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||   ||| |||||  || |||    
T  30766673 tttatgaagtattttgttcaagttaaatgtagtgaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattttcatatttttttcaaattt 30766772  T
Q  604 tcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||  |||||||||  ||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  30766773 t-acttttagtcctcaaactttccaaaattttcaatttga--ccccaataaatttataaaaaattgcaaatt 30766841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 390 - 675
Target Start/End: Original strand, 52527039 - 52527325
Alignment:
Q  390 gtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggat 487  Q
    |||||||||||||||| ||||||||||  | ||||||| || |   |||||||||||| |  |||||||||| |||||||||| | ||||||||||| ||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgttatggaggaattcaaatactttgaggtaaattccattgtttggttgataatttgaagaat 52527138  T
Q  488 tttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    ||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |    
T  52527139 tttcaaaataatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaggaaagaatttcaaaattcttcattgtt 52527238  T
Q  587 ataat-ttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||| |||| ||||||| |||||| ||||| ||| | || ||||| |||||||||||  |||||||||||||  | ||||||| |||||    
T  52527239 ataatctttttaaattttgcatttt-ggtccacaattttttcaaaaatttcaatttga--ccccaataaattttcaaaaaattgtaaatt 52527325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 389 - 603
Target Start/End: Original strand, 7302348 - 7302565
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| || ||||||||||||||||||||| |||| | |||||||| |||   |||||| |||| |||||||||||||||| ||||||| |    
T  7302348 agtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattcagataccttgaggtgaattccattgtttggataatagtttgaagaa 7302447  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||     
T  7302448 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgcagagaatttaaaatgacacctaaaagttaagaatttcaaaattcttcattgt 7302547  T
Q  586 tataatttttaaaatttt 603  Q
     ||| |||| ||||||||    
T  7302548 catatttttaaaaatttt 7302565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 463 - 674
Target Start/End: Original strand, 26547093 - 26547293
Alignment:
Q  463 ttgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagtt 561  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26547093 ttgttcggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagtt 26547192  T
Q  562 aagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttata 661  Q
    ||||||||||||||||||| ||| ||||| |||| ||||||| |||||| ||||||         |||||||||||||||||  ||||||||||||||||    
T  26547193 aagaatttcaaaattcttcattgttataaattttcaaattttgcatttt-ggtcct---------caaaattttcaatttga--ccccaataaatttata 26547280  T
Q  662 caaaattgcaaat 674  Q
     ||||||||||||    
T  26547281 aaaaattgcaaat 26547293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 384 - 573
Target Start/End: Complemental strand, 21307607 - 21307415
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||||| ||||||||||||||| ||||||||| | ||||||||| |||| |||||||||||||| |  ||||| |||| |||||||||||||||||||||    
T  21307607 ctaataatgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttg 21307508  T
Q  482 aaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaa 573  Q
     |  |||||||||||||| ||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21307507 taaaattttcaaaatgatagaaatttatgaagtattttattcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaa 21307415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 456 - 647
Target Start/End: Complemental strand, 43863952 - 43863761
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  43863952 aattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacct 43863853  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||  ||||||||||||| |||||| ||| | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||||||    
T  43863852 aaaaactaagaatttcaaatttcttcattgttgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattgacccc 43863761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 388 - 611
Target Start/End: Complemental strand, 34396579 - 34396355
Alignment:
Q  388 tagtgtgtttggatggggaaatgtttt-gagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaag 484  Q
    ||||||||||||||| || ||| |||| ||| ||||||||||||  ||||||||||||||| |  ||||||||||||||| ||||||| |||||||||||    
T  34396579 tagtgtgtttggatgaggcaatatttttgagggaatgtaatattacaagggaattcaaatactttgaggtaaatttcattctttggatgataatttgaag 34396480  T
Q  485 gattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgtt 583  Q
        ||||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  |    
T  34396479 a---ttcaaaatgatgggaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaggtaagaatttaaaaattcttcact 34396383  T
Q  584 gctataatttttaaaatttttcattttg 611  Q
    | |||||| ||| ||||||| |||||||    
T  34396382 gttataatcttttaaattttgcattttg 34396355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 383 - 646
Target Start/End: Original strand, 21730898 - 21731163
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat-gaggtaaatttcattgtttggataataatttg 481  Q
    ||||| |||||||||||||| || |||||  | ||   ||||||| |||| | |||||||||||| | ||| | |||||||||||||| ||||||||||     
T  21730898 tctaagagtgtgtttggatgagggaatgtcctaaggttatgtaatgttttgaaggaattcaaatatttgagatgaatttcattgtttgaataataattta 21730997  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||  ||||| |||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||||    
T  21730998 aacaatttttaaaatgatggaaatttatgaactattttgttcaagttaaatttagagaatttcaaatgacatctaaaacttaagaattttaaatttcttc 21731097  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccc 646  Q
     ||| |||||||||| | ||||| |||| ||| ||||||||| |  |||||||||||| |||||||    
T  21731098 attgttataattttttagattttgcattatggctcctcaaatttatcaaaattttcaaattgaccc 21731163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 429 - 580
Target Start/End: Complemental strand, 38506906 - 38506752
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| ||||||||||||||||  ||||| |||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  38506906 ttttgagggaattcaaataatttgaggtgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaag 38506807  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  38506806 ttaaaattaaagaatttcaaatgacacctaaaacttaagaatttcaaaattcttc 38506752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 382 - 573
Target Start/End: Complemental strand, 671696 - 671502
Alignment:
Q  382 ttctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatt 479  Q
    |||||| ||||| ||||||| ||| ||||||||||| ||||||| | |||| |||||||||| ||| |  | ||| |||| |||||||||| ||||||||    
T  671696 ttctaagagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattcagatactttggggtgaattccattgtttgggtaataatt 671597  T
Q  480 tgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaa 573  Q
    ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  671596 tgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacatctaaaaactaagaatttcaaa 671502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 31021756 - 31021917
Alignment:
Q  462 attgtttggataataatttgaaggatttt-caaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaag 559  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||| || ||||| || ||||||||||||| | ||||||||||||||||||||||    
T  31021756 attgtttgcataataatttgaagaatttttcaaaatgatggaaatttatgaagtattttgtccaagttaaatttaaaaaatttcaaatgacacctaaaag 31021855  T
Q  560 ttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||| |||||| |||||||||||    
T  31021856 ttaagaatttcaaaattcttcattgttataatttttcaaattttacatttt-ggtcctcaaat 31021917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 449 - 580
Target Start/End: Original strand, 46706716 - 46706848
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    |||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||    
T  46706716 tgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttttttcaagttaaatttagagaatttcaaat 46706815  T
Q  548 gacacctaaaagttaagaatttcaaaattcttc 580  Q
    || ||||||||||||||||||| | ||||||||    
T  46706816 gatacctaaaagttaagaatttaataattcttc 46706848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 516 - 647
Target Start/End: Original strand, 30767426 - 30767557
Alignment:
Q  516 tttgttcaagttaaattta--gagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttggg 613  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| ||||||| |||||  ||    
T  30767426 tttgttcaagttaaatttatagagaatttcaaatgacacctaaaagctaagaatttcaaaattcttcattgttataatttttcaaattttgcattt--gg 30767523  T
Q  614 tcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||||||| ||||||||||||||||||||||||    
T  30767524 tcctcaaattttccaaaattttcaatttgacccc 30767557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 487 - 612
Target Start/End: Complemental strand, 28182215 - 28182090
Alignment:
Q  487 ttttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||| |||||||||||||||||| || || |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| |    
T  28182215 tttttaaaatgatggaaatttatgaagtacttgttcaagttaaatttagagaatttcaatagacacctaaaagttaagaatttcaaaattcttcattgtt 28182116  T
Q  587 ataatttttaaaatttttcattttgg 612  Q
    ||| || || ||||||| ||||||||    
T  28182115 atatttgttcaaattttgcattttgg 28182090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 391 - 580
Target Start/End: Original strand, 47336885 - 47337077
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    ||||| |||||||||||||||||| ||  |||||||| |||| ||  |||| |||||   | |||| |||| |||||||||||| |||||||  || |||    
T  47336885 tgtgtgtggatggggaaatgttttaaggtaatgtaatgttttgagataatttaaatatgtttaggtgaattccattgtttggatgataatttatagaatt 47336984  T
Q  489 ttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    || |||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||||||  ||||||||||||| ||| ||| ||||||    
T  47336985 ttaaaaatgatagaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacttctaaaagttaagatttttaaatttcttc 47337077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 456 - 547
Target Start/End: Complemental strand, 35279923 - 35279831
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  35279923 aattacattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaat 35279831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 466 - 601
Target Start/End: Original strand, 46635927 - 46636063
Alignment:
Q  466 tttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaag 564  Q
    |||| ||||||||||| || ||||||||||||||| |||||||| ||  |||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  46635927 tttgaataataatttggagaattttcaaaatgatgaaaatttatgaagcattttgtttaagttaaatttagagaatttcaaatgacacctaaaagctaag 46636026  T
Q  565 aatttcaaaattcttcgttgctataatttttaaaatt 601  Q
    ||||||||| |||||| |   |||||||||| |||||    
T  46636027 aatttcaaatttcttcatacttataatttttcaaatt 46636063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 475 - 574
Target Start/End: Complemental strand, 1146926 - 1146827
Alignment:
Q  475 taatttgaaggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaa 574  Q
    |||||||||| |||||||||||||| || |||||| || |||||||  ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  1146926 taatttgaagaattttcaaaatgatagatatttatgaagtatttgtcgaagttaaatttagagaatttcaaatgacatctaaaagctatgaatttcaaaa 1146827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 486 - 580
Target Start/End: Original strand, 36635983 - 36636078
Alignment:
Q  486 attttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||||| |||||||||||||||||| ||  |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  36635983 atttttaaaatgatggaaatttatgaaggattttgttcaagttaaatttagagaattataaatgacacctaaaagttaagaatttcaaatttcttc 36636078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 494 - 595
Target Start/End: Complemental strand, 15760445 - 15760343
Alignment:
Q  494 aatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatt 592  Q
    |||||||||||||||| || ||||| ||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||| |||||||    
T  15760445 aatgatggaaatttattaagtattttgttcaggttaaatttaaagattttcaaatgacatctaaaagttaagaatttcaaatttcttcattgttataatt 15760346  T
Q  593 ttt 595  Q
    |||    
T  15760345 ttt 15760343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 456 - 630
Target Start/End: Original strand, 55460411 - 55460581
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| ||| |||||||| |||||| | || |||||||||||||||||||||||  || || |||||||||||||| |||| |||||||||||||||||      
T  55460411 aattccatcgtttggatgataattaggagaattttcaaaatgatggaaatttacgaagtattttgttcaagttaattttaaagaatttcaaatgacac-- 55460508  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaa 630  Q
      ||| ||||||||||||  |||||| ||  |||||||||| ||||||| |||||| |||||||| || |||||||    
T  55460509 --aagctaagaatttcaattttcttcattcttataatttttcaaattttgcatttt-ggtcctcacattttccaaa 55460581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 463 - 547
Target Start/End: Original strand, 26323434 - 26323519
Alignment:
Q  463 ttgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||    
T  26323434 ttgtttggataataatttataggattttcaaaatgatggaaatttatgaagtattttgttcaagtcaaatttagagaatttcaaat 26323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 387 - 646
Target Start/End: Complemental strand, 44288531 - 44288278
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatgaggta--aatttcattgtttggataataatttgaag 484  Q
    ||||| ||||||||||| | |||||||||||  ||| |||| |||| | |||||||||||| |   | |  |||| |||| ||||||| |||||||| ||    
T  44288531 atagtatgtttggatggaggaatgttttgaggtaatataatgttttgatggaattcaaatacttttgaacgaattacattatttggatgataatttggag 44288432  T
Q  485 gattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgtt 583  Q
     || || |||||  || |||||||| || ||||| |||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||         
T  44288431 aatctttaaaatattgaaaatttatgaagtattttgttcaagttaaatttagataatttcaaatgacaccaaaaagctaagaatttc-aaattct----- 44288338  T
Q  584 gctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccc 646  Q
      |||||||||| ||||||| |||||| | |||||| || || |||||||||||| |||||||    
T  44288337 --tataatttttcaaattttgcatttt-gatcctcacatttttcaaaattttcaaattgaccc 44288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 546
Target Start/End: Complemental strand, 47284237 - 47284113
Alignment:
Q  425 aatattttaagggaattcaaataatgaggta--aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgtt 521  Q
    |||||||| |||||||||||||| |  | ||  |||| ||||||||| |||||||||||||| |||||||||||||||||||||||| || || ||| ||    
T  47284237 aatattttgagggaattcaaatactttgatatgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagtattttatt 47284138  T
Q  522 caagttaaatttagagaatttcaaa 546  Q
    ||||||||||||| |||||||||||    
T  47284137 caagttaaatttaaagaatttcaaa 47284113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 389 - 518
Target Start/End: Original strand, 30767106 - 30767238
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata---atgaggtaaatttcattgtttggataataatttgaagg 485  Q
    ||||| ||||||||||| ||||||||||| |||| |||| || | | ||||||||||||   |  |||| |||| |||||||||| |||||||||||||     
T  30767106 agtgtatttggatggggtaatgttttgagggaatctaatgttatgaaggaattcaaatacttaaaaggtgaattccattgtttgggtaataatttgaaga 30767205  T
Q  486 attttcaaaatgatggaaatttataaaatattt 518  Q
    |||||||||||||||||||||||| || |||||    
T  30767206 attttcaaaatgatggaaatttatgaagtattt 30767238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 48825110 - 48825022
Alignment:
Q  474 ataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagtt 561  Q
    ||||||||||| ||||| ||||||||  ||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||    
T  48825110 ataatttgaagaatttttaaaatgataaaaatttataaaatattttgttcaagttaaatttaaagaatttcaactgacatctaaaagtt 48825022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 580
Target Start/End: Complemental strand, 31189467 - 31189273
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||| ||| |  |||||||||||  |||||||| |||| || ||||||||||| |  ||||||||||| || |||||| | ||||||| ||  |    
T  31189467 agtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggtaaattttatcgtttgggtgataatttaaataa 31189368  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    |||| || |||||||||| |||| || ||||| ||| |||||||||||| |||||||||||| |||||| |||  || ||| |||||| ||||||    
T  31189367 tttttaagatgatggaaacttatgaagtattttgtttaagttaaatttatagaatttcaaataacaccttaaatctatgaaattcaaatttcttc 31189273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 456 - 558
Target Start/End: Complemental strand, 1796231 - 1796128
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||||||||||| | ||||| |||||| | ||||| ||||||||| ||||||||||| || ||| || |||||||||||| ||||||||||||||||| |    
T  1796231 aatttcattgttcgaataatgatttgatgaatttttaaaatgatgaaaatttataaagtattttatttaagttaaatttaaagaatttcaaatgacactt 1796132  T
Q  555 aaaa 558  Q
    ||||    
T  1796131 aaaa 1796128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 457 - 580
Target Start/End: Original strand, 32665956 - 32666081
Alignment:
Q  457 atttcattgtttggataat-aatttgaaggattttcaaaatgatggaaatttataaaatatttgttcaa-gttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||| |||||| || ||||||||| ||||| |||||| || |||||||| || |||||  |||| ||||||||| |||||||| ||||| |||||    
T  32665956 atttcattgcttggatgattaatttgaagaatttttaaaatgctgaaaatttatgaagtattttgtcaaagttaaattttgagaatttgaaatgtcacct 32666055  T
Q  555 aaaagttaagaatttcaaaattcttc 580  Q
    ||||||||  ||||||||| ||||||    
T  32666056 aaaagttagaaatttcaaatttcttc 32666081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 579
Target Start/End: Original strand, 40493135 - 40493264
Alignment:
Q  451 aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatga 549  Q
    |||||||||  ||| ||||||| |||||||| || || || ||| | ||| |||||||| || ||||| ||||| ||| ||||||||| |||||||||||    
T  40493135 aggtaaattctattatttggatgataatttggagaatgtttaaagtaatgaaaatttatgaactattttgttcatgttcaatttagagtatttcaaatga 40493234  T
Q  550 cacctaaaagttaagaatttcaaaattctt 579  Q
    ||||||||| |||  ||||||||| |||||    
T  40493235 cacctaaaaattagaaatttcaaatttctt 40493264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 612 - 675
Target Start/End: Original strand, 7302618 - 7302679
Alignment:
Q  612 ggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||||  ||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  7302618 ggtcctcaaactttccaaaattttcaatttga--ccccaataaatttatataaaattgcaaatt 7302679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 612 - 675
Target Start/End: Complemental strand, 21307403 - 21307342
Alignment:
Q  612 ggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||||| ||||||||||||||||||||  |||||||||| ||||| |||||||||||||    
T  21307403 ggtcctcaaattttccaaaattttcaatttga--ccccaataaaattatagaaaattgcaaatt 21307342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 49457340 - 49457400
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  49457340 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 49457400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 46672873 - 46672818
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  46672873 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 46672818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 580
Target Start/End: Original strand, 20634315 - 20634404
Alignment:
Q  492 aaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    |||||||| ||||| ||| || ||||| || ||||||||||||||||||||||||||||||||||  |  || |||||||||| ||||||    
T  20634315 aaaatgattgaaatctatgaattattttgtacaagttaaatttagagaatttcaaatgacacctagtatatacgaatttcaaatttcttc 20634404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 27252056 - 27251996
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| |||||||||||||||||  |||||||||| ||||||||| |||| |||||||||||    
T  27252056 ctaagagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaa 27251996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 44436255 - 44436315
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||    
T  44436255 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaa 44436315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 44692984 - 44692924
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||    
T  44692984 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 44692924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 9129501 - 9129446
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||    
T  9129501 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaa 9129446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 9137608 - 9137553
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||    
T  9137608 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaa 9137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 563 - 622
Target Start/End: Complemental strand, 35279842 - 35279784
Alignment:
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||||| |||||||||| |||||||||| ||||||| |||||| |||||||||||    
T  35279842 agaatttcaaatttcttcgttgttataatttttcaaattttgcatttt-ggtcctcaaat 35279784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 44692824 - 44692879
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||||    
T  44692824 agtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaa 44692879  T

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Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 530
Target Start/End: Complemental strand, 50168662 - 50168536
Alignment:
Q  407 aatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaa 504  Q
    |||||||||||  |||||||| |||| ||| || |||||||||   || | |||| |||||||||||||||||| || || |||||||||| ||||||||    
T  50168662 aatgttttgaggtaatgtaatgttttgaggaaactcaaataattttagctgaattccattgtttggataataatatggagaattttcaaaaggatggaaa 50168563  T
Q  505 tttat-aaaatatttgttcaagttaaa 530  Q
    || || ||  | |||||||||||||||    
T  50168562 ttaatgaagttttttgttcaagttaaa 50168536  T

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Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 586 - 674
Target Start/End: Complemental strand, 24242058 - 24241975
Alignment:
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaat 674  Q
    |||| ||||| |||||||  ||||||| ||||||||| ||||||||||||||||||||  ||||||||||||| |  ||||||||||||    
T  24242058 tatattttttcaaattttgtattttgg-tcctcaaattttccaaaattttcaatttga--ccccaataaattttt--aaaattgcaaat 24241975  T

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Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 39110387 - 39110451
Alignment:
Q  380 aattctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||| | ||||||||||||||  ||||||||||||| ||||||||| ||||  ||||||||||    
T  39110387 aattcttagagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaa 39110451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 5415785 - 5415840
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||| ||| ||| ||||||| ||||||||| |||| |||||||||||    
T  5415785 agtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaa 5415840  T

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Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 551
Target Start/End: Original strand, 43526681 - 43526716
Alignment:
Q  516 tttgttcaagttaaatttagagaatttcaaatgaca 551  Q
    |||||| |||||||||||||||||||||||||||||    
T  43526681 tttgtttaagttaaatttagagaatttcaaatgaca 43526716  T

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Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 46635859 - 46635917
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    |||||||||||||| | ||||||||||||  |||||||| |||| ||| ||||||||||    
T  46635859 agtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattcaaata 46635917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 25655317 - 25655350
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaat 422  Q
    ||||||||||||||||||||||||||||| ||||    
T  25655317 agtgtgtttggatggggaaatgttttgagggaat 25655350  T

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Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 25655442 - 25655409
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttga 416  Q
    ||||| ||||||||||||||||||||||||||||    
T  25655442 tctaagagtgtgtttggatggggaaatgttttga 25655409  T

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Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 444
Target Start/End: Original strand, 31070415 - 31070463
Alignment:
Q  395 tttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||| ||||||||| ||||||||| |||| |||||||||||    
T  31070415 tttggatggggaa-tgttttgagggaatgtaatgttttgagggaattcaa 31070463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 35279970 - 35279929
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatatttt 432  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgtttt 35279929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 417
Target Start/End: Original strand, 2732641 - 2732669
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgag 417  Q
    |||||||||||||||||||||||||||||    
T  2732641 agtgtgtttggatggggaaatgttttgag 2732669  T

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Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 19475824 - 19475903
Alignment:
Q  395 tttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||| | ||||||||||| ||||||||| || | ||| ||||||||||   |||||| |||| ||||||||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattccattgtttggat 19475903  T

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Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 42130689 - 42130749
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||||| ||||| ||| |||||||   ||||||| |||| |||||||||||    
T  42130689 ctaatagtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaa 42130749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 6e-79; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 390 - 666
Target Start/End: Complemental strand, 37037019 - 37036743
Alignment:
Q  390 gtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggat 487  Q
    ||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||||| |  || ||||||| ||||||| |||||||||||||||| ||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttgatgtaaattccattgttcggataataatttgaagaat 37036920  T
Q  488 tttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  37036919 tttcaaaatgatagaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtt 37036820  T
Q  587 ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaa 666  Q
    | || |||| ||||||| |||||| ||||||||| | ||||||||||||||||||||  | |||||||||||||| ||||    
T  37036819 agaaattttcaaattttgcatttt-ggtcctcaagttttccaaaattttcaatttga--ctccaataaatttataaaaaa 37036743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 384 - 647
Target Start/End: Original strand, 8224765 - 8225030
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| |||||||||||||| || ||||||||||| ||||||||| |||| |||||||| ||||| |  || || |||| |||||||||||| |||||||     
T  8224765 ctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattccattgtttggatgataattta 8224864  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  8224865 aagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaggtaagaattttaaaattcttc 8224964  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
     ||| |||||||||| ||||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  8224965 attgttataatttttcaaattttgcatttt-ggtcctcaaatttcccaaaattttcaatttgacccc 8225030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 456 - 675
Target Start/End: Complemental strand, 37447361 - 37447145
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||     
T  37447361 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttggttcaagttaaatttagagaatttcaaatgacacca 37447262  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataa 654  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||| ||||||||| | ||||||||||||||||||||    |||||||    
T  37447261 aaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgcatttt-ggtcctcaatttttccaaaattttcaatttga---accaataa 37447166  T
Q  655 atttatacaaaattgcaaatt 675  Q
    ||||||| |||||||||||||    
T  37447165 atttataaaaaattgcaaatt 37447145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 396 - 675
Target Start/End: Original strand, 44570687 - 44570965
Alignment:
Q  396 ttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaaggattttcaa 493  Q
    |||||||||  ||||||||||| ||||||||| |||| | ||||||||||||   |||||| |||| |||||||||||||||| ||||||| |||||| |    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcga 44570786  T
Q  494 aatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatt 592  Q
    |||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||| ||    
T  44570787 aatgatggaaatttatgaagtattttgttcaagttaaatatagagaatttcaaatgacacctaaaagttaagaatttcaaaattgttcattgtcatattt 44570886  T
Q  593 tttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||| ||||||| |||||| ||||||||||  ||||||||| ||||||||||   ||||| ||||||||| |||||||||||||    
T  44570887 tttcaaattttacatttt-ggtcctcaaactttccaaaatgttcaatttga---cccaaaaaatttataaaaaattgcaaatt 44570965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 394 - 675
Target Start/End: Complemental strand, 37447968 - 37447688
Alignment:
Q  394 gtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaaggattttc 491  Q
    |||||||| ||| ||| ||| ||| ||||||||| |||| | ||||||||||||   |||||| |||| |||||||||||||||| ||||||| ||||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttc 37447869  T
Q  492 aaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataa 590  Q
    |||||||||||||||||| || ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||     
T  37447868 aaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaaattcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatat 37447769  T
Q  591 tttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||| ||||||| |||||| |||| |||||  ||| ||||||||||||||||  |||||||||||||||| |||||||||||||    
T  37447768 tttttcaaattttacatttt-ggtcttcaaactttcgaaaattttcaatttga--ccccaataaatttata-aaaattgcaaatt 37447688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 396 - 652
Target Start/End: Complemental strand, 37448465 - 37448207
Alignment:
Q  396 ttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaa 493  Q
    ||||||| || ||||||||||||||||||||| |||| |||||||| ||||| |  || || |||| ||||||||||||| ||||||| || ||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaattccattgtttggata-taatttggagaattttcaa 37448367  T
Q  494 aatgatggaaatttataaa--atatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataat 591  Q
    |||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||  ||||     
T  37448366 aatgatggaaatttatgaagtatatttgttcaagttaaatttaaagaatttcaaatgacatctaaaagtgaagaatttcaaaattcttcattgtcataaa 37448267  T
Q  592 ttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaat 652  Q
    |||| |||||||||| ||| ||||||||||| |||||||||||||||||||||||| ||||    
T  37448266 ttttcaaatttttcaattt-ggtcctcaaattttccaaaattttcaatttgacccctcaat 37448207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 414 - 675
Target Start/End: Complemental strand, 15468009 - 15467748
Alignment:
Q  414 tgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataa 511  Q
    |||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  15468009 tgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatga 15467910  T
Q  512 aatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcatttt 610  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| | | |||||| | ||||| ||||||    
T  15467909 agtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcatttt 15467810  T
Q  611 gggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  15467809 -ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 15467748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 389 - 611
Target Start/End: Complemental strand, 49216410 - 49216183
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaa-tattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagg 485  Q
    |||||||||||||| ||||||||||||| |||| |||| | |||  |||||||||||||| |  |||||||||||||||||| |||||||||||| |||     
T  49216410 agtgtgtttggatgtggaaatgttttgaaagaacgtaaatgtttcgagggaattcaaatactttgaggtaaatttcattgttgggataataatttaaaga 49216311  T
Q  486 attttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaa-ttcttcgtt 583  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  ||    
T  49216310 attttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaatgttaagaatttcaaaatttctttatt 49216211  T
Q  584 gctataatttttaaaatttttcattttg 611  Q
    | |||||||||| ||||||| |||||||    
T  49216210 gttataatttttcaaattttgcattttg 49216183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 383 - 611
Target Start/End: Original strand, 39887123 - 39887354
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataattt 480  Q
    ||||| ||||||||| |||| || |||||||| || |||| | || |||| | | |||||||||| |  || || |||| ||||||||||||||||||||    
T  39887123 tctaagagtgtgtttagatgagggaatgttttaagggaatatgatgttttgaagaaattcaaatactttgatgtgaattccattgtttggataataattt 39887222  T
Q  481 gaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattctt 579  Q
    |||| |||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39887223 gaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattctt 39887322  T
Q  580 cgttgctataatttttaaaatttttcattttg 611  Q
    | ||| |||||||||| ||||||| |||||||    
T  39887323 cattgttataattttttaaattttacattttg 39887354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 384 - 621
Target Start/End: Complemental strand, 28632661 - 28632424
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa-ataatgaggtaaatttcattgtttggataataatttga 482  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||| |||| || |||||||| |   |||||| |||| |||||||||||||||||||| |    
T  28632661 ctaatagtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaatactttgaggtgaattccattgtttggataataatttaa 28632562  T
Q  483 aggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcg 581  Q
    || ||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  28632561 agaattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacatctaaaagttaagaatttcaaatttcttca 28632462  T
Q  582 ttgctataatttttaaaatttttcattttgggtcctcaaa 621  Q
    ||| ||||| |||| ||||||| |||||| ||||||||||    
T  28632461 ttgttataa-ttttcaaattttgcatttt-ggtcctcaaa 28632424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 456 - 675
Target Start/End: Complemental strand, 41823162 - 41822944
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||| ||||||| ||||||||||| |||||||||||| || ||||| ||||||||||||| ||||||||||||||| ||||||    
T  41823162 aattccattgtttggataatagtttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaataacacct 41823063  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataattttt-aaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaata 653  Q
    ||||||||||||||||||||||||||  ||  ||| ||||| |||| ||| |||||| ||||||||||  ||||||||||||||||||||  ||||||||    
T  41823062 aaaagttaagaatttcaaaattcttcactgtcatattttttaaaaaatttacatttt-ggtcctcaaagtttccaaaattttcaatttga--ccccaata 41822966  T
Q  654 aatttatacaaaattgcaaatt 675  Q
    |||||||| |||||||||||||    
T  41822965 aatttataaaaaattgcaaatt 41822944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 389 - 612
Target Start/End: Complemental strand, 6470757 - 6470532
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaat--aatgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||||||||||||||||||||| |||| |||||||||||||    ||||||  ||| ||||||||| |||||||||||||| |    
T  6470757 agtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattccattgtttgaataataatttgaagaa 6470658  T
Q  487 ttttcaaaatgatggaaatttat-aaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||||| | | |||     
T  6470657 ttttcaaaatgatggaaatttatgaaaaaatttgttcaagttaaatttagagaatttcaaatgaca-cgaaatattaagaatttcaaaattatccattgt 6470559  T
Q  586 tataatttttaaaatttttcattttgg 612  Q
    |||||||||| || |||| ||||||||    
T  6470558 tataatttttcaagttttgcattttgg 6470532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 429 - 622
Target Start/End: Original strand, 44571243 - 44571438
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  || || |||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| |||||||    
T  44571243 ttttgagggaattcaaatactttgaagtgaattccattgtttggataataatttaaagaatttttaaaatgatggaaatttataaagtattttgttcaag 44571342  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| |||||| |||||||||||    
T  44571343 ttgaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattttgcatttt-ggtcctcaaat 44571438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 456 - 611
Target Start/End: Original strand, 35491228 - 35491384
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| | |||||||||||||||||||||||||||||||| |    
T  35491228 aatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgctcaagttaaatttagagaatttcaaatgacactt 35491327  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttg 611  Q
    |||||||||||||||||||||||||| ||| |||||||||  ||||||| |||||||    
T  35491328 aaaagttaagaatttcaaaattcttcattgttataattttccaaattttgcattttg 35491384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 946378 - 946669
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatgagg-taaatttcattgtttggataataatttgaaggat 487  Q
    |||||||||||||| | ||||| |||||| ||||||| | |||| |||||||| ||||| |  || | ||||  ||||||||||||||||||||||| ||    
T  946378 agtgtgtttggatgag-aaatgctttgagggaatgtattgttttgagggaatttaaatactttggatgaattctattgtttggataataatttgaagcat 946476  T
Q  488 tttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |    
T  946477 tttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgtt 946576  T
Q  587 ataat------ttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaa-tttatacaaaattgcaaatt 675  Q
     | ||      |||| | |||||||||||| ||||||||||| |||||||| |||||| ||||  |||||||||| |||| | |||||||||||||    
T  946577 gttattttcaattttcatatttttcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaattttaaaaaaaattgcaaatt 946669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 449 - 647
Target Start/End: Original strand, 34003525 - 34003723
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||| |||| |||||||||||| ||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  34003525 tgaggtgaattccattgtttggatgataatttgatgaattatcaaaatgatggaaatttatgaaatattttgttcaagttaaatttagagaatttaaaat 34003624  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
     ||||||||||||||||||||||||| |||||| |||  |||| |||| ||||||| |||||| ||| ||||||| | ||||||||||||| ||||||||    
T  34003625 aacacctaaaagttaagaatttcaaatttcttcattgtaataaatttttaaattttgcatttt-ggttctcaaatttcccaaaattttcaaattgacccc 34003723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 21267819 - 21267656
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||  |||| |||||| ||||||||||||||||||||||    
T  21267819 tgagataaatttcattgtttggataataatttgaagaattttcaaaatgatggaa-tttatgaagaattttgttcaatttaaatttagagaatttcaaat 21267721  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgg 612  Q
    |||||||||||||||||||||||||| |||||| ||| |||||||||| ||| ||| ||||||||    
T  21267720 gacacctaaaagttaagaatttcaaatttcttcattgttataattttttaaaatttacattttgg 21267656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 384 - 622
Target Start/End: Original strand, 49659214 - 49659454
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||||| ||   |||||||| ||||| |  ||||| |||| |||||||||||||||||||||    
T  49659214 ctaagagtgtgtttggatggggaa-tgtattgagggaatgtaatgttacgagggaatttaaatactttgaggtgaattccattgtttggataataatttg 49659312  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| |||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||    
T  49659313 aagaattttcaaaatgatggtaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacatctaaaagttaaaaatttcaaaactcttc 49659412  T
Q  581 gttgctata-atttttaaaatttttcattttgggtcctcaaat 622  Q
     ||| || |  ||||| ||||||| |||||| |||||||||||    
T  49659413 attgttaaattttttttaaattttgcatttt-ggtcctcaaat 49659454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 456 - 595
Target Start/End: Complemental strand, 41822545 - 41822405
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||||    
T  41822545 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaaattagagaatttcaaatgacacct 41822446  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataattttt 595  Q
    |||| |||||||||| |||||||||| ||| ||||||||||    
T  41822445 aaaacttaagaattttaaaattcttcattgatataattttt 41822405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 449 - 611
Target Start/End: Complemental strand, 23956371 - 23956208
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaat 547  Q
    |||||| ||||||||||||||||| ||||||||||  ||| |||| |||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  23956371 tgaggtgaatttcattgtttggattataatttgaaaaattatcaatatgatggaaatttataaagtattttattcaagttaaatttagagaatttcaaat 23956272  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttg 611  Q
    ||||| |||||||||||||||||||| |||||| ||| || ||||||| ||||||| |||||||    
T  23956271 gacacataaaagttaagaatttcaaatttcttcattgttaaaatttttcaaattttgcattttg 23956208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 389 - 591
Target Start/End: Original strand, 31166312 - 31166517
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| || |||||||||||| |||||||| |||| | ||||| |||||| |  ||| | ||||  |||||||| |||||||||||||| |    
T  31166312 agtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgagatgaattctattgtttgaataataatttgaagaa 31166411  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||  |||||| |||     
T  31166412 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttatagaatttcaaatgacatctaaaagctaagaatttcaattttcttcattgt 31166511  T
Q  586 tataat 591  Q
    ||||||    
T  31166512 tataat 31166517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 407 - 570
Target Start/End: Original strand, 946933 - 947099
Alignment:
Q  407 aatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaa 504  Q
    ||||||||||| ||||||| |||||| ||| ||||||||||  ||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  946933 aatgttttgagggaatgtattattttgaggaaattcaaatactatgaggtgaattccattgtttggataataatttgaagcattttcaaaatgatagaaa 947032  T
Q  505 tttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttc 570  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||| || |  ||||||||||    
T  947033 tttatgaaatattttgttcaagttaaatttaaagaatttcaaatgacacccaacaactaagaatttc 947099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 419 - 573
Target Start/End: Original strand, 47820245 - 47820401
Alignment:
Q  419 gaatgtaatattttaagggaattcaaataatga--ggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata- 515  Q
    ||||||| | ||||||||||||||||||| |    ||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || ||     
T  47820245 gaatgtattgttttaagggaattcaaatactttagggtgaatttcattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtat 47820344  T
Q  516 tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaa 573  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47820345 tttgttcaagttaaatttag-gaatttcaaatgacacctaaaagttaagaatttcaaa 47820401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 389 - 646
Target Start/End: Original strand, 10166501 - 10166759
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| |  ||||||||| |  |||||||| |||| | |||| |||||||   | |||| |||||||||||||| || |||||||| || |    
T  10166501 agtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaactcaaatatatttaggtgaatttcattgtttgaatgataatttggagaa 10166600  T
Q  487 ttttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||| |||| |||||||| || |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| ||      
T  10166601 ttttcaaaacgatg-aaatttatgaagtattttattcaagttaaatttaaagaatttcaaatgacacctaaaagttaagaattttaaatttcttcattct 10166699  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccc 646  Q
    |||||||||| ||||||| |||| | |||| | |||| || |||||||||||| |||||||    
T  10166700 tataatttttcaaattttgcattat-ggtctttaaatttttcaaaattttcaaattgaccc 10166759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 516 - 675
Target Start/End: Complemental strand, 43619818 - 43619662
Alignment:
Q  516 tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtc 615  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||| |||||||  ||||| ||||    
T  43619818 tttgttcaagttaaaattagagaatttcaaatgacacctaaaacttaagaatttcaaaattcttcattattataatttttcaaattttgtatttt-ggtc 43619720  T
Q  616 ctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||| ||||||||||| ||||||||  ||||| ||||||| |  |||||||||||||    
T  43619719 ctcaaattttccaaaatttccaatttga--ccccactaaattttttaaaaattgcaaatt 43619662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 466 - 577
Target Start/End: Original strand, 13181669 - 13181781
Alignment:
Q  466 tttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaag 564  Q
    ||||||||||||||||||| || ||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  13181669 tttggataataatttgaagaatattcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaaagttaag 13181768  T
Q  565 aatttcaaaattc 577  Q
    |||||||| ||||    
T  13181769 aatttcaatattc 13181781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 429 - 595
Target Start/End: Original strand, 50471792 - 50471961
Alignment:
Q  429 ttttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |   |||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||| | || ||||| ||| ||     
T  50471792 ttttgagggaattcaaatactttcaggtgaattttattgtttggataataatttaaagaattttcaaaatgatggaaatttttgaagtattttgttgaaa 50471891  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataattttt 595  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| ||| |||| |||||    
T  50471892 ttaaatttagaaaatttcaaatgacacataaatgttaagaatttcaaaattcttcattgttatatttttt 50471961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 32201835 - 32202022
Alignment:
Q  451 aggtaaatttcattgtttggataat-aatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatg 548  Q
    |||| |||| ||||||||||||||| ||||||||| |||||||||||||| | ||||| | || ||||| |||| |||||||| ||||||||||||||||    
T  32201835 aggtgaattccattgtttggataattaatttgaagaattttcaaaatgattggaattt-tgaagtattttgttctagttaaatatagagaatttcaaatg 32201933  T
Q  549 acacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
    ||||||||||| || |||||||||| |||||| ||| |||||||||| ||||||  |||||| | ||||||| | |||||||||||||||    
T  32201934 acacctaaaagctatgaatttcaaatttcttcattgttataatttttcaaatttaacatttt-gatcctcaacttttccaaaattttcaa 32202022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 41822699 - 41822594
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||||||    
T  41822699 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaaattagagaatttcaaatgacacct 41822600  T
Q  555 aaaagt 560  Q
    ||||||    
T  41822599 aaaagt 41822594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 429 - 594
Target Start/End: Complemental strand, 52135656 - 52135488
Alignment:
Q  429 ttttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaag 525  Q
    |||| |||||||||||||| |   |||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||| || || ||||||||||    
T  52135656 ttttgagggaattcaaatatttttaggtaaattttattgtttggatgataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttcaag 52135557  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttt 594  Q
    ||||| || ||||||||||||||||  ||||||||||||||||| ||| |||||| ||| || ||||||    
T  52135556 ttaaagtttgagaatttcaaatgacgtctaaaagttaagaattttaaatttcttcattgttaaaatttt 52135488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 436 - 569
Target Start/End: Original strand, 48953618 - 48953753
Alignment:
Q  436 ggaattcaaataat-gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaattt 533  Q
    |||||||||||| | ||||| ||||  ||||||||||||||||||||||| ||||||||||||||||| |||||| || || ||||||||||| ||||||    
T  48953618 ggaattcaaatatttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatggatatttatgaagtattttgttcaagtcaaattt 48953717  T
Q  534 agagaatttcaaatgacacctaaaagttaagaattt 569  Q
    ||||||||| |||||||||||||||| |||||||||    
T  48953718 agagaatttgaaatgacacctaaaagctaagaattt 48953753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 390 - 611
Target Start/End: Original strand, 51847855 - 51848077
Alignment:
Q  390 gtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg-aggtaaatttcattgtttggataataatttgaaggatt 488  Q
    |||||||||||||| | |||||||||||  |||||||| |||||| | |||||||||| |  |||| |||| ||| |||||||| |||||||| || ||     
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgttttaaagaaattcaaatactttaggtgaattccatcgtttggatgataatttggagaata 51847954  T
Q  489 ttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgcta 587  Q
    || | |||||||||||||||| || ||||| ||| ||||||| ||||  ||||||||||||||||||||||| || |||||||||| |||||| ||  ||    
T  51847955 ttaagaatgatggaaatttatcaagtattttgtttaagttaa-tttatggaatttcaaatgacacctaaaagctatgaatttcaaatttcttcattctta 51848053  T
Q  588 taatttttaaaatttttcattttg 611  Q
    |||||||| ||||||| |||||||    
T  51848054 taatttttcaaattttgcattttg 51848077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 461 - 647
Target Start/End: Original strand, 32647377 - 32647561
Alignment:
Q  461 cattgtttggataataatttgaaggattttcaaaatgatggaaatttataaa--atatttgttcaagttaaatttagagaatttcaaatgacacct-aaa 557  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| ||  || |||||||||||||    |||||||||||||||||||||| |||    
T  32647377 cattgtttggatattaatttgaagcattttcaaaatgatggaaatttatgaagtatttttgttcaagtta----tagagaatttcaaatgacacctaaaa 32647472  T
Q  558 agttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    || ||||||||||||| |||||| ||| | | |||||| | ||||| |||||| | ||||||||| ||||||||  ||||| ||||||||    
T  32647473 agctaagaatttcaaatttcttcattgttgttatttttcatattttgcatttt-gatcctcaaattttccaaaaaattcaaattgacccc 32647561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 429 - 572
Target Start/End: Original strand, 32128072 - 32128218
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  | ||| |||| ||||||||  |||||||||||||| |||||||||||||||| ||||||| |  ||||| |||||||    
T  32128072 ttttgagggaattcaaatactttgtggtgaattccattgttttaataataatttgaagaattttcaaaatgatgggaatttatgaggtattttgttcaag 32128171  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaa 572  Q
    ||||||||||||||||||||||||| | |||||  ||||||||||||    
T  32128172 ttaaatttagagaatttcaaatgacgcttaaaaagtaagaatttcaa 32128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 389 - 538
Target Start/End: Complemental strand, 32288004 - 32287851
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcatt-gtttggataataatttgaagg 485  Q
    ||||||||||||||| | || |||||||| ||||||||| |||| ||| |||||||||| |  || || || | |||| ||||||||||||||||||||     
T  32288004 agtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttgaagtgaaatccattagtttggataataatttgaaga 32287905  T
Q  486 attttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagaga 538  Q
    |||| |||||||||||||||||||||| || |||||||||||||||| ||||||    
T  32287904 atttccaaaatgatggaaatttataaagtattttgttcaagttaaatatagaga 32287851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 576
Target Start/End: Original strand, 1902127 - 1902253
Alignment:
Q  451 aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgttc-aagttaaatttagagaatttcaaatga 549  Q
    |||||||||| ||||||||||| |||||||  || ||||| ||||||||||||||| || |  |||||  || |||| |||||| |||||||||||||||    
T  1902127 aggtaaattttattgtttggatgataatttagagaatttttaaaatgatggaaattcatgaggtattttctcgaagtaaaattttgagaatttcaaatga 1902226  T
Q  550 cacctaaaagttaagaatttcaaaatt 576  Q
    ||||||||||||| |||||||||||||    
T  1902227 cacctaaaagttaggaatttcaaaatt 1902253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 42230791 - 42230883
Alignment:
Q  456 aatttcattgtttggataataattt-gaaggattttcaaaatgatggaaatttataaaatat-ttgttcaagttaaatttagagaatttcaaa 546  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  42230791 aatttcattgtttggataataattttgaagaatttttaaaatgatggaaatttatgaagtatcttgtttaagttaaatttagagaatttcaaa 42230883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 411 - 574
Target Start/End: Original strand, 31195480 - 31195646
Alignment:
Q  411 ttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaattta 508  Q
    ||||||| ||||||||| || | ||| |||| ||||| |  ||||| |||| ||||||||| |||||||||||||| ||||| ||||||||  |||||||    
T  31195480 ttttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaattccattgtttgtataataatttgaagaatttttaaaatgataaaaattta 31195579  T
Q  509 taaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaa 574  Q
      || ||||| ||| |||| ||||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  31195580 cgaagtattttgttaaagtcaaatttaaagaatttgaaatgacacctgaaagctaagaatttcaaaa 31195646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 384 - 508
Target Start/End: Complemental strand, 43623054 - 43622928
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||||| ||||||||||  ||||||||| |||| ||  |||| ||||| |  ||||| ||||||||| |||| |||||||||||    
T  43623054 ctaagagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtgaatttcattatttgaataataatttg 43622955  T
Q  482 aaggattttcaaaatgatggaaattta 508  Q
    ||| ||||||||||||||| |||||||    
T  43622954 aagaattttcaaaatgatgaaaattta 43622928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 24273291 - 24273206
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||||| ||||||||||| ||||||||| || | ||||||||||||||   |||||| |||| ||||||||||||    
T  24273291 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 24273206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 444
Target Start/End: Original strand, 45565397 - 45565451
Alignment:
Q  390 gtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaa 45565451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 444
Target Start/End: Original strand, 27804269 - 27804322
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaa 27804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 675
Target Start/End: Original strand, 48953752 - 48953833
Alignment:
Q  591 tttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||||||| |||||||| ||||||||  ||||||||||||||||||||  |||||||||||||  | |||||||||||||    
T  48953752 tttttaaaattttgcattttgg-tcctcaaactttccaaaattttcaatttga--ccccaataaatttccaaaaaattgcaaatt 48953833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 15034816 - 15034761
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  15034816 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 15034761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 23536069 - 23536124
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  23536069 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 23536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 473
Target Start/End: Complemental strand, 47165283 - 47165197
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggata 473  Q
    ||||||||||||||| |||||||||||||  |||||||| |||| ||||||||||||||   | |||| |||| |||||||||||||    
T  47165283 agtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtgaattccattgtttggata 47165197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 26501150 - 26501092
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  26501150 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaata 26501092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 34756432 - 34756484
Alignment:
Q  392 gtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  34756432 gtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 34756484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 4038077 - 4038132
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||| ||||| ||||||||||| ||||||||| |||| |||||||||||    
T  4038077 agtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaa 4038132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 15034661 - 15034716
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||    
T  15034661 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 15034716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 30190293 - 30190238
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||    
T  30190293 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaa 30190238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 444
Target Start/End: Complemental strand, 34756588 - 34756529
Alignment:
Q  385 taatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||||| |||||||  ||| |||| |||| |||||||||||    
T  34756588 taatagtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaa 34756529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 558
Target Start/End: Complemental strand, 12087067 - 12086961
Alignment:
Q  454 taaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagtt-aaatttagagaatttcaaatgaca 551  Q
    |||| |||||||||||||| ||||  || || ||||||||||||| | |||||||| ||||| |||||  ||||| ||| ||||| ||||||||||||||    
T  12087067 taaacttcattgtttggatgataacatggagaattttcaaaatgacgaaaatttatgaaatattttgtcaaagttaaaacttagacaatttcaaatgaca 12086968  T
Q  552 cctaaaa 558  Q
    | |||||    
T  12086967 cgtaaaa 12086961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 514
Target Start/End: Original strand, 34003377 - 34003506
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaag 484  Q
    |||||||||||||||| |  ||| |||| |   ||| ||||||||| |||| ||||||||| |  ||||| |||| |||| ||||||| ||||||||| |    
T  34003377 atagtgtgtttggatgagtgaatattttaaagcaatataatattttgagggcattcaaatactttgaggtgaattccattatttggatgataatttgatg 34003476  T
Q  485 gattttcaaaatgatggaaatttataaaat 514  Q
     |||||||||||||  ||||||||| ||||    
T  34003477 aattttcaaaatgagagaaatttatgaaat 34003506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 40264189 - 40264132
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||| ||| |||||||  |||||||| |||| |||||||||||    
T  40264189 atagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaa 40264132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 27935647 - 27935587
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||| ||||| ||||||| ||||||||| |||| ||| |||||||    
T  27935647 ctaagagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaa 27935587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 4038232 - 4038177
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||| ||||||| ||| ||||| |||| |||||||||||    
T  4038232 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 4038177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 44410313 - 44410368
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| ||||||||||  ||||||||||| ||||||||| ||||||| ||||||||    
T  44410313 agtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaa 44410368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 28745796 - 28745854
Alignment:
Q  386 aatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||| ||||||||||| ||| ||||||| |||||||||  ||| |||||||||||    
T  28745796 aatagtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaa 28745854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 532 - 578
Target Start/End: Complemental strand, 48503276 - 48503230
Alignment:
Q  532 ttagagaatttcaaatgacacctaaaagttaagaatttcaaaattct 578  Q
    ||||||||||||||||||||| |||||||||| ||||| ||| ||||    
T  48503276 ttagagaatttcaaatgacacataaaagttaaaaattttaaatttct 48503230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 528 - 562
Target Start/End: Complemental strand, 52280882 - 52280848
Alignment:
Q  528 aaatttagagaatttcaaatgacacctaaaagtta 562  Q
    ||||||| |||||||||||||||||||||||||||    
T  52280882 aaatttaaagaatttcaaatgacacctaaaagtta 52280848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 38277573 - 38277517
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||| ||| |||||||  |||||||| |||| |||||||||||    
T  38277573 atagtgtgtttggatgggg-aatattttgaggtaatgtaatgttttgagggaattcaa 38277517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 50005238 - 50005181
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| | ||| |||||||  |||||||| |||| |||||||||||    
T  50005238 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaa 50005181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 29446747 - 29446807
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| |||||||||| | |||| ||||||||||  ||||||||| |||| |||||||||||    
T  29446747 ctaagagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattcaa 29446807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 563 - 643
Target Start/End: Original strand, 42230873 - 42230952
Alignment:
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttga 643  Q
    |||||||||||||||||| ||  ||||||||||  |||||| |||||| ||||||  ||| || |||||||||||| ||||    
T  42230873 agaatttcaaaattcttcattattataatttttcgaattttgcatttt-ggtcctttaatttttcaaaattttcaacttga 42230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 29257432 - 29257146
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  29257432 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagca 29257333  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||     
T  29257332 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgt 29257233  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||||| ||||||||  ||||| ||||  |||||||||||||  | |||||||||||||    
T  29257232 tgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaaattcaaattga--ccccaataaatttccaaaaaattgcaaatt 29257146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 24044962 - 24045249
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| || ||||||||||| ||||||||| |||| | ||||||||||||   |||||| |||| |||||||||| ||||| ||||||| |    
T  24044962 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttgggtaatagtttgaagaa 24045061  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| |||     
T  24045062 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaaaattaaaaatttcaaaattcttcattgt 24045161  T
Q  586 tata-atttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     |||  ||||| ||||||| |||||| || |||||||  ||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  24045162 aatatttttttcaaattttacatttt-ggacctcaaactttccaaaattttcaatttga--ccccaataaatttataaaaaattgcaaatt 24045249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 28324743 - 28324457
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataa--tgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| | ||||||||||||   |||| | |||| |||||||||||||||| ||||||| |    
T  28324743 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgagctgaattacattgtttggataatagtttgaagaa 28324644  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||| ||| |||     
T  28324643 ttttcaaaatgatggaaatttatgaggtattttgttcaagttaaatgtagggaaattcaaatgaaacctaaaagttaagaatttcaaaattattcattgt 28324544  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     ||| ||||| ||||||| |||||| ||||||||||  ||||||||||||||| ||||   |||||||||||||||||||||||||||||    
T  28324543 catattttttcaaattttacatttt-ggtcctcaaactttccaaaattttcaacttga--tcccaataaatttatacaaaattgcaaatt 28324457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 429 - 675
Target Start/End: Original strand, 34008823 - 34009069
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||| |||||||    
T  34008823 ttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 34008922  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||| ||| ||| |||||| ||||||||||| ||    
T  34008923 ttaaatttagagaatttcaaatgacacataaaagttaagaatttcaaaattcttcattgttatattttttcaaaatttgcatttt-ggtcctcaaatttt 34009021  T
Q  626 ccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||||||||||||||  ||||||||| ||| |  |||||||||||||    
T  34009022 ccaaaattttcaatttga--ccccaataattttttttaaaattgcaaatt 34009069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 391 - 647
Target Start/End: Complemental strand, 44346757 - 44346499
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    ||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcatt 44346658  T
Q  489 ttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgcta 587  Q
    ||||||||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| ||| |     
T  44346657 ttcaaaatgatggaaatttatgaagtattttgttgaagttaaatttagagaatttcaaatgacacctaaaagcaaagaatttcaaatttcttcattgttg 44346558  T
Q  588 taatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    | |||||| | ||||| |||||| ||||||||||| |||||||| ||| || ||||||||    
T  44346557 ttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttaaaattgacccc 44346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 388 - 675
Target Start/End: Complemental strand, 29482889 - 29482601
Alignment:
Q  388 tagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagg 485  Q
    |||||||||||||||||| ||||||||||| ||| ||| | |||| |||||||||||||| |  | ||| |||| ||||||||||||||||||||||||     
T  29482889 tagtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagc 29482790  T
Q  486 attttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttg 584  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||| |||    
T  29482789 attttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaaaactaagaatttcaaatttcttcattg 29482690  T
Q  585 ct-ataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     |  || ||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  29482689 ttgttattttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 29482601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 384 - 675
Target Start/End: Original strand, 14236 - 14526
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||| |  | ||| ||||||||||||| ||||||||||||    
T  14236 ctaagagtgtgtttggatggggaa-tgtttggagggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgtttagataataatttg 14334  T
Q  482 aaggattttcaaaatgatggaaatttataaaatat-ttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| |||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||| ||||||    
T  14335 aagtattttcaaaatgatggaaatttatgaagtatcttgttcaagttaaatttagagaatttcaaatgacacttaaaagctaagagttttaaatttcttc 14434  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     ||| | | |||||| | ||||| |||||| ||||||||||| | | |||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  14435 attgttgttatttttcatattttgcatttt-ggtcctcaaatttccaaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 14526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 384 - 638
Target Start/End: Complemental strand, 33377383 - 33377127
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||||| ||||||||||| |||| || | |||| |||||||||||||| |  | ||| |||| |||||||||||||||||||||    
T  33377383 ctaagagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttg 33377284  T
Q  482 aaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    ||| |||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  33377283 aagcattttcaaaatgatggaaatttacgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttc 33377184  T
Q  581 gttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
     ||| | | |||||| | ||||| |||||| ||||||||||| |||||||| ||||||    
T  33377183 attgttgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaa 33377127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 383 - 621
Target Start/End: Original strand, 33986000 - 33986240
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataattt 480  Q
    ||||| ||||||||||||||||| ||||| ||||   |||||||| |||| || ||||||||||| |  ||||| ||||||||||||| |||||||||||    
T  33986000 tctaagagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtgaatttcattgtttagataataattt 33986099  T
Q  481 gaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattctt 579  Q
    |||| ||||||||||||||||||||| || || ||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33986100 gaagaattttcaaaatgatggaaattcatgaagtattttggtcaagtcaaatttagagaatttgaaatgacacctaaaagttaagaatttcaaaattctt 33986199  T
Q  580 cgttgctataatttttaaaatttttcattttgggtcctcaaa 621  Q
    | ||| || ||||||| ||||||| |||||| ||||||||||    
T  33986200 cattgttacaatttttcaaattttgcatttt-ggtcctcaaa 33986240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 645
Target Start/End: Original strand, 7079394 - 7079591
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaat 547  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||  || |||||  ||||||||||||||||||||||||||||    
T  7079394 tgaggtaaatttcattgtttggataataatttaaagaattttcaaaacgatgaaaatttaagaagtattttattcaagttaaatttagagaatttcaaat 7079493  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctat-aatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacc 645  Q
    || |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||  |||||||||| |||||||||| |||| ||||||    
T  7079494 gatacctaaaagttaagaatttcaaaattcttcattgttataaatttttaaaattttgcatttt-agtcctcaaattttccaaaattatcaaattgacc 7079591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 456 - 644
Target Start/End: Original strand, 6416255 - 6416442
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||||||| || || ||||||||| ||||||||||| |||||||||||||| ||    
T  6416255 aattccattgttttgataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaacttaaatttagaaaatttcaaatgaca-ct 6416353  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgac 644  Q
     ||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||| ||||||||||| ||||||||||| |||||||||    
T  6416354 taaagttaagaatttcaaaattcttcattgttataatttttcaaattttgcatttt-ggtcctcaaattttccaaaatttccaatttgac 6416442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 402 - 589
Target Start/End: Original strand, 8049269 - 8049458
Alignment:
Q  402 ggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgat 499  Q
    |||| ||||||||||| |||| |||| |||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8049269 gggggaatgttttgagggaatataatgttttgagggaattcaaatactttgaggtaaatttcattgtttggataataatttgaagaattttcaaaatgat 8049368  T
Q  500 ggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctata 589  Q
     ||||||||| || || |||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||| ||| ||||    
T  8049369 tgaaatttatgaagtattttgttcaagttaaatttagagaacttc-aatgacacttaacagttaagaatttcaaaattcttcattgttata 8049458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 429 - 647
Target Start/End: Complemental strand, 26520480 - 26520260
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaag 525  Q
    |||| |||||||||||||| |  ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||| || || ||| ||||||    
T  26520480 ttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttattcaag 26520381  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    | ||||||||||||||| ||||||||| | |||| |||||||||||||| ||||  ||| |||||||||| ||||||| | |||| |||||||| || ||    
T  26520380 tcaaatttagagaatttgaaatgacactttaaagctaagaatttcaaaactctttattgttataatttttcaaattttgcgtttt-ggtcctcatatttt 26520282  T
Q  626 ccaaaattttcaatttgacccc 647  Q
     |||||||||||||||||||||    
T  26520281 tcaaaattttcaatttgacccc 26520260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 420 - 638
Target Start/End: Complemental strand, 31980533 - 31980313
Alignment:
Q  420 aatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatt 517  Q
    |||||||| ||||||||||||||||||| |  | ||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||| || ||||    
T  31980533 aatgtaatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtatt 31980434  T
Q  518 t-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcc 616  Q
    | |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |||||| ||| | | |||||| | ||||| |||||| |||||    
T  31980433 ttgttcaagttaaatttagagaatttcaaatgacacttaaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcatttt-ggtcc 31980335  T
Q  617 tcaaatgttccaaaattttcaa 638  Q
    |||| | |||||||| ||||||    
T  31980334 tcaatttttccaaaaatttcaa 31980313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 420 - 647
Target Start/End: Original strand, 13144616 - 13144844
Alignment:
Q  420 aatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatt 517  Q
    |||||||| || | |||||||||||||| |  ||||| |||| |||||||||||||||||||||||| |||||||||||||||  ||||||| || ||||    
T  13144616 aatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtatt 13144715  T
Q  518 t-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcc 616  Q
    | ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||| ||| ||| ||| |||||| |||||    
T  13144716 ttgttcaagttcaatttagagaatttcaaatgacacctaaaaggtaagaatttcaaaattcatcattgttataatctttcaaaatttgcatttt-ggtcc 13144814  T
Q  617 tcaaatgttccaaaattttcaatttgacccc 647  Q
    || | | |  |||||||||||||||||||||    
T  13144815 tc-attttatcaaaattttcaatttgacccc 13144844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 456 - 672
Target Start/End: Complemental strand, 40734113 - 40733900
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  40734113 aattccattgttttgataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacct 40734014  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataa 654  Q
    ||||| ||||||||||||| |||||| ||  | | |||||| | ||||| |||||| ||||||||||| || ||||| |||||| ||||  |||||||||    
T  40734013 aaaagctaagaatttcaaatttcttcattattgttatttttcatattttgcatttt-ggtcctcaaat-tttcaaaaatttcaaattga--ccccaataa 40733918  T
Q  655 atttatacaaaattgcaa 672  Q
    ||||  | ||||||||||    
T  40733917 atttccaaaaaattgcaa 40733900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 461 - 612
Target Start/End: Original strand, 10593147 - 10593299
Alignment:
Q  461 cattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaag 559  Q
    |||||||||||||||||||||||| ||||||||||||||  || ||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||    
T  10593147 cattgtttggataataatttgaagaattttcaaaatgattaaactttatgaaatattttgttcaagttaaatttagagaatttcaaataacacctaagag 10593246  T
Q  560 ttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgg 612  Q
    |||||||||| |||||||||| ||| |||||||||| ||||||| ||||||||    
T  10593247 ttaagaattttaaaattcttcattgttataatttttcaaattttacattttgg 10593299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 1088358 - 1088078
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||| ||| | ||||||||||||||||||| | |||| ||| |||||||||| |  | |||||||| |||||||||||||||||||| ||| |    
T  1088358 agtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaaatattttggggtaaattccattgtttggataataatttcaagca 1088259  T
Q  487 ttttcaaaatgatggaaatttataaaata-tttgttcaag-ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttg 584  Q
    ||||||||||||| ||||||||| || || |||||||||| |||||||||||||||||||||||||||||||||| ||||      ||| |||||| |||    
T  1088258 ttttcaaaatgatagaaatttatgaagtattttgttcaagtttaaatttagagaatttcaaatgacacctaaaagctaag------aaatttcttcattg 1088165  T
Q  585 ctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     | | |||||| | ||||| |||||| |||| |||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  1088164 ttgttatttttcatattttgcatttt-ggtcatcaaattttccaaaaatttcaaattga--ccccaataaattt-caaaaaattgcaaatt 1088078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 429 - 611
Target Start/End: Original strand, 29611412 - 29611587
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgttcaagt 526  Q
    |||| |||||||||||||| |  ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||   |||      |||||||||||    
T  29611412 ttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatgaaa---tat------tttgttcaagt 29611502  T
Q  527 taaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttg 611  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||| |||||| ||| |||||||||| ||| |||||||||||    
T  29611503 taaatttagagaatttcaaataacacttaaaagctaagaatttcaaatttcttcattgttataatttttcaaaattttcattttg 29611587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 389 - 595
Target Start/End: Complemental strand, 15186898 - 15186689
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||| |||   ||||||||||||| |||||||| |||| ||  |||||||||| |   |||| ||||  ||||||||| | ||||||  ||| |    
T  15186898 agtgtgtttgaatgaaaaaatgttttgagataatgtaatgttttgagtaaattcaaatagtttaaggtgaattctattgtttgggtgataattaaaagaa 15186799  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    |||||||| |||||||||||||| || ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| || |||||||     
T  15186798 ttttcaaattgatggaaatttatgaagtattttgttcaagttaaatttagagatttttaaatgacacctaaaagttaagaattttaaattttttcgttgt 15186699  T
Q  586 tataattttt 595  Q
    ||||| ||||    
T  15186698 tataaatttt 15186689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 456 - 643
Target Start/End: Complemental strand, 31976594 - 31976413
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || ||| ||||| ||||||||||||||||| |      ||||    
T  31976594 aatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttattcaaattaaatttagagaatttta------acct 31976501  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttga 643  Q
    ||||| ||| ||||| |||  ||||| ||| |||||||| | ||||||| |||||| ||||||||||| | ||||||||||||| ||||    
T  31976500 aaaagctaaaaattttaaatatcttcattgttataatttgttaaattttgcatttt-ggtcctcaaatttaccaaaattttcaaattga 31976413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 420 - 612
Target Start/End: Complemental strand, 35404792 - 35404597
Alignment:
Q  420 aatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatt 517  Q
    ||||||||||||| ||| |||||||||| |  ||||| ||||| | ||||||||||||||||  |||  |||| |||||||| ||||||||| || ||||    
T  35404792 aatgtaatattttgaggaaattcaaatactttgaggtgaattttactgtttggataataattccaagagtttttaaaatgatagaaatttatgaagtatt 35404693  T
Q  518 t-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgg 612  Q
    | |||||||||||||| | |||||| ||||||||||||||| ||||||||||||| |||||||| ||  || || |||| ||||||| ||||||||    
T  35404692 ttgttcaagttaaattcaaagaattacaaatgacacctaaaggttaagaatttcataattcttcattattaaaaatttttaaattttgcattttgg 35404597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 579
Target Start/End: Original strand, 9982642 - 9982831
Alignment:
Q  392 gtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattt 489  Q
    |||||||||||| ||| |||||| ||  |||||||| |||| || ||||| ||||| |  ||||| |||| |||||||| ||||||||||||||| ||||    
T  9982642 gtgtttggatggagaa-tgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattccattgtttagataataatttgaagaattt 9982740  T
Q  490 tcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattctt 579  Q
    | ||||||||| |||||||| || ||||| |||||||||||||||| |||||||||||||||| ||||||  ||||||||| ||| |||||    
T  9982741 ttaaaatgatgaaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacatctaaaaactaagaatttgaaatttctt 9982831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 461 - 595
Target Start/End: Complemental strand, 24510284 - 24510150
Alignment:
Q  461 cattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaaag 559  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||| || || |||||| |||||||||||||| | ||||||| |||| |||||||    
T  24510284 cattgtttgaataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttaaagttaaatttagaaactttcaaaagaca-ctaaaag 24510186  T
Q  560 ttaagaatttcaaaattcttcgttgctataattttt 595  Q
    |||||||||| |||||||||| ||| || |||||||    
T  24510185 ttaagaattttaaaattcttcattgttagaattttt 24510150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 461 - 554
Target Start/End: Complemental strand, 36625232 - 36625138
Alignment:
Q  461 cattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| || || |||| |||||||||||||| |||||||||||||||||||    
T  36625232 cattgtttagataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgatcaagttaaatttaaagaatttcaaatgacacct 36625138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 476 - 675
Target Start/End: Complemental strand, 6460878 - 6460678
Alignment:
Q  476 aatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaa 574  Q
    ||||||||| | |||||||||||||||||||||| || ||||| |||||||||||||||| | || |||||||||||||| ||||||| ||||||||||     
T  6460878 aatttgaagaaatttcaaaatgatggaaatttatgaattattttgttcaagttaaatttaaataagttcaaatgacacctgaaagttaggaatttcaaac 6460779  T
Q  575 ttcttcgttgctataatttttaaaatttttcattttgggtcctcaaa--tgttccaaaattttc-aatttgaccccccaataaatttatacaaaattgca 671  Q
    |||||| ||  | |||||||| ||| |||  ||||| |||||  |||  | ||||||||||||| |||||||  |||||||||||||  | |||||||||    
T  6460778 ttcttcatttgtttaattttttaaaatttgtatttt-ggtcccgaaattttttccaaaattttcaaatttga--ccccaataaattttcaaaaaattgca 6460682  T
Q  672 aatt 675  Q
    ||||    
T  6460681 aatt 6460678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 580
Target Start/End: Complemental strand, 33423019 - 33422891
Alignment:
Q  454 taaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaattt-caaatgaca 551  Q
    ||||||||||||||| ||| ||||||||||   |||| |||||| || |||||||| || ||||| || ||| ||||||||||||||||| |||||||||    
T  33423019 taaatttcattgtttagatgataatttgaaaattttttaaaatggtgtaaatttatgaactattttgtccaaattaaatttagagaattttcaaatgaca 33422920  T
Q  552 cctaaaagttaagaatttcaaaattcttc 580  Q
    |||||||| |||||||| |||||||||||    
T  33422919 cctaaaagataagaattgcaaaattcttc 33422891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 518
Target Start/End: Original strand, 44889356 - 44889487
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||||||||||| |||| |||| |||| ||||||||||||||   ||| || |||| ||||||||||||||||||||| || |    
T  44889356 agtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattccattgtttggataataatttgtagaa 44889455  T
Q  487 ttttcaaaatgatggaaatttataaaatattt 518  Q
    |||||| ||||||| |||||||| || |||||    
T  44889456 ttttcataatgatgaaaatttatgaagtattt 44889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 390 - 532
Target Start/End: Complemental strand, 35979084 - 35978942
Alignment:
Q  390 gtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggataataatttgaaggat 487  Q
    |||||||||||||| | ||||||||||| ||||||||| ||   ||||||||||||||   |||||| |||| |||||||||||||||||||||||  ||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgaggtgaattccattgtttggataataatttgaa--at 35978987  T
Q  488 tttcaaaatgatggaaatttataaaata-tttgttcaagttaaatt 532  Q
    ||| |||||||||| ||||||| || || |||||||||||||||||    
T  35978986 ttt-aaaatgatgggaatttatgaagtattttgttcaagttaaatt 35978942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 492 - 612
Target Start/End: Original strand, 7668746 - 7668867
Alignment:
Q  492 aaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataa 590  Q
    |||| ||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||||||| |||||| ||||||||| ||| |||||| ||  |||||    
T  7668746 aaaaagatggaaatttatgaaatattttgtttaagtttaattaagagaatttcaaatgacacttaaaaggtaagaattttaaatttcttcattcttataa 7668845  T
Q  591 tttttaaaatttttcattttgg 612  Q
     |||| ||||||| ||||||||    
T  7668846 attttcaaattttacattttgg 7668867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 461 - 557
Target Start/End: Complemental strand, 24063803 - 24063706
Alignment:
Q  461 cattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaa 557  Q
    |||||||||||| |||||||| |  ||||||||||| ||| ||||||||  ||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  24063803 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 24063706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 563 - 675
Target Start/End: Complemental strand, 28190603 - 28190495
Alignment:
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatac 662  Q
    |||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||||||||| || |||||||||||||||||  |||||||||||||  |     
T  28190603 agaatttcaaaattcttcattgctataatttttcaaa-tttgcatttt-ggtcctcaaattttacaaaattttcaatttga--ccccaataaatttcaaa 28190508  T
Q  663 aaaattgcaaatt 675  Q
    ||||||| |||||    
T  28190507 aaaattgtaaatt 28190495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 541 - 622
Target Start/End: Original strand, 44889763 - 44889843
Alignment:
Q  541 ttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||| | |||| |||||||||||    
T  44889763 ttcaaatgacacttaaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgc-tttttggtcctcaaat 44889843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 621
Target Start/End: Original strand, 15718271 - 15718434
Alignment:
Q  459 ttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaa 557  Q
    |||||| |||||||  ||||||||||  |||||||||||||| |||||||  ||  | |||||| |||||||||||||| |||||||||||| | |||||    
T  15718271 ttcattttttggatgttaatttgaagagttttcaaaatgatgaaaatttaggaaggattttgtttaagttaaatttagataatttcaaatgatatctaaa 15718370  T
Q  558 agttaagaatttcaaaatt-cttcgttgctataatttttaaaatttttcattttgggtcctcaaa 621  Q
    || ||||||||||||| || |||| ||| | |  ||||| ||||||| |||||| ||||||||||    
T  15718371 agctaagaatttcaaacttccttcattgttttgttttttcaaattttgcatttt-ggtcctcaaa 15718434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 17110866 - 17110926
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  17110866 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaa 17110926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 572 - 675
Target Start/End: Complemental strand, 26520797 - 26520697
Alignment:
Q  572 aaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgca 671  Q
    ||||||||| ||| ||||| |||| ||| ||| || ||||| ||||||||  ||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  26520797 aaattcttcattgttataaattttgaaaatttgcaatttgg-tcctcaaactttccaaaattttcaatttga--cccctataaatttataaaaaattgca 26520701  T
Q  672 aatt 675  Q
    ||||    
T  26520700 aatt 26520697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 429 - 533
Target Start/End: Complemental strand, 43167767 - 43167660
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaag 525  Q
    |||||| |||||||||||| |  ||||| |||||  |||||| ||||||||||||||| |||||||||||| || |||||||| || || |||||| |||    
T  43167767 ttttaaaggaattcaaatactttgaggtgaatttagttgtttagataataatttgaagaattttcaaaatgttgaaaatttatgaagtattttgtttaag 43167668  T
Q  526 ttaaattt 533  Q
    ||||||||    
T  43167667 ttaaattt 43167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 17111026 - 17110971
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||    
T  17111026 agtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaa 17110971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 527
Target Start/End: Original strand, 34388571 - 34388650
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagtt 527  Q
    |||||| |||| |||||||||||||||||||| ||| | ||| |||||||||||||||||| || || ||||||||||||    
T  34388571 tgaggtgaattccattgtttggataataatttaaagaacttttaaaatgatggaaatttatgaagtattttgttcaagtt 34388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 384 - 447
Target Start/End: Original strand, 36103098 - 36103161
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    |||| ||||||||||||||| | ||||||||||| ||||||||| |||||||| ||||||||||    
T  36103098 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaata 36103161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 515613 - 515528
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||| | ||||||||||  ||||||||| |||||||||| ||||||||   ||| || |||||||||||||||||    
T  515613 agtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttgatgtgaatttcattgtttggat 515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 13404827 - 13404884
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||| |||||||||||    
T  13404827 atagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaa 13404884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 3853618 - 3853673
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||    
T  3853618 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaa 3853673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 444
Target Start/End: Complemental strand, 3853777 - 3853718
Alignment:
Q  385 taatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||||| |||||||  |||||||| |||  |||||||||||    
T  3853777 taatagtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaa 3853718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 3858076 - 3858131
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||    
T  3858076 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaa 3858131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 444
Target Start/End: Complemental strand, 3858235 - 3858176
Alignment:
Q  385 taatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||||| |||||||  |||||||| |||  |||||||||||    
T  3858235 taatagtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaa 3858176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 444
Target Start/End: Complemental strand, 4156328 - 4156269
Alignment:
Q  385 taatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||  ||| ||||||| ||||||||| |||| |||||||||||    
T  4156328 taatagtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaa 4156269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 8689130 - 8689189
Alignment:
Q  385 taatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||| ||||||||||| ||||||||||||  ||||||||| |||| |||||||||||    
T  8689130 taatagtatgtttggatggagaaatgttttgaaggaatgtaatgttttgagggaattcaa 8689189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 546
Target Start/End: Complemental strand, 28190652 - 28190593
Alignment:
Q  488 tttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaa 546  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||  |||||||||||||    
T  28190652 tttcaaaatgatagaaatttatgaaatattttgttcaagttaaatagagagaatttcaaa 28190593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 33902669 - 33902724
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||    
T  33902669 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 33902724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 42711437 - 42711382
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||| ||| ||||||||||| ||||||||| |||| |||||||||||    
T  42711437 agtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaa 42711382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 23011736 - 23011821
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    |||||||||||| |||  ||||||||||| ||||||||| || | ||||||||||||||   |||||| |||| ||||||||||||    
T  23011736 agtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 23011821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 647
Target Start/End: Original strand, 43167805 - 43167918
Alignment:
Q  527 taaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttc 626  Q
    |||||||||| ||||||||||||||||||||| ||||  |||      || ||| ||| |||| ||||| |||||||  ||||| ||| ||||||| |||    
T  43167805 taaatttagacaatttcaaatgacacctaaaaattaactatt------ttgttcattgttatattttttgaaattttgtatttt-ggttctcaaattttc 43167897  T
Q  627 caaaattttcaatttgacccc 647  Q
    ||||||||||||||| |||||    
T  43167898 caaaattttcaatttcacccc 43167918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 40046801 - 40046861
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| |||||||||||||||   ||||||||||| ||||||||| |||| |||||||||||    
T  40046801 ctaagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaa 40046861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 547
Target Start/End: Complemental strand, 10795041 - 10794994
Alignment:
Q  501 gaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||    
T  10795041 gaaatttataaagtattttgtacaagttaaatttagagaatttcaaat 10794994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 14800117 - 14800062
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||| ||||||| ||| ||||| |||| |||||||||||    
T  14800117 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 14800062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 14991694 - 14991749
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| |||||||||||  |||||||| |||| ||| |||||||    
T  14991694 agtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaa 14991749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 440
Target Start/End: Complemental strand, 27322730 - 27322679
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaat 440  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||||| |||||    
T  27322730 agtgtgtttggatgggagaatgttttgagggaatgtaatgttttaaaggaat 27322679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 441
Target Start/End: Original strand, 30435250 - 30435300
Alignment:
Q  391 tgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaatt 441  Q
    ||||||||||||| ||||||||||||| ||||||||| |||  ||||||||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatt 30435300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 30435383 - 30435350
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaat 422  Q
    ||||||||||||||||||||||||||||| ||||    
T  30435383 agtgtgtttggatggggaaatgttttgagggaat 30435350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 612 - 675
Target Start/End: Complemental strand, 36625130 - 36625070
Alignment:
Q  612 ggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    ||||||| ||| |||||||||||||| |||||  |||| ||||||||||| |||||||||||||    
T  36625130 ggtcctcgaattttccaaaattttcattttga--cccctataaatttata-aaaattgcaaatt 36625070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 417
Target Start/End: Original strand, 42711306 - 42711334
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgag 417  Q
    |||||||||||||||||||||||||||||    
T  42711306 agtgtgtttggatggggaaatgttttgag 42711334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 388 - 647
Target Start/End: Complemental strand, 19856 - 19596
Alignment:
Q  388 tagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagg 485  Q
    |||||||||||||||||| | ||||||||| ||||||||| |||||||  |||||||||| |  ||||| |||| |||| ||| |||||||||||||||     
T  19856 tagtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtgaattacattatttagataataatttgaaga 19758  T
Q  486 attttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttg 584  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||    
T  19757 attttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagataatttcaaatgacacctaaaagttaagaatttcataattcttcattg 19658  T
Q  585 ctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
     |||||||||  ||||||| |||||| ||| ||||||| ||||||| ||||||||||||||||    
T  19657 ttataattttccaaattttgcatttt-ggttctcaaattttccaaacttttcaatttgacccc 19596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 19195 - 19321
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| ||||||||||||||||| | | ||||||| ||||||||| |||| ||| |||||||||| |  ||||| |||| |||||||| ||||||||||||    
T  19195 ctaaaagtgtgtttggatgggggagtattttgagggaatgtaatgttttgagg-aattcaaatattttgaggtgaattccattgtttcgataataatttg 19293  T
Q  482 aaggattttcaaaatgatggaaatttat 509  Q
    ||| ||||| ||||||||||||||||||    
T  19294 aagaattttaaaaatgatggaaatttat 19321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 134; Significance: 2e-69; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 389 - 612
Target Start/End: Original strand, 2869 - 3094
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat-gaggtaaatttcattgtttggataataatttgaaggat 487  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||| |||||||||||||| | ||||| |||| |||||||||||||||||||||||| ||    
T  2869 agtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaatatttgaggtgaattccattgtttggataataatttgaagaat 2968  T
Q  488 tttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||| |||||| ||| |    
T  2969 tttcaaaatgatggaaatttatgaaatattttgttcaagtcaaatttagagaatttgaaatgacaccttaaagctaagaatttcaaatttcttcattgtt 3068  T
Q  587 ataatttttaaaatttttcattttgg 612  Q
    ||||||||| ||||||| ||||||||    
T  3069 ataatttttcaaattttacattttgg 3094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 8e-69; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 16516173 - 16516460
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggat-aataatttgaagg 485  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||| | |||||| ||||| |  || || || | |||||||||||| || |||||||||     
T  16516173 agtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatttaaatactttgatgtgaactccattgtttggattaagaatttgaaga 16516272  T
Q  486 attttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttg 584  Q
    ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16516273 attttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattg 16516372  T
Q  585 ctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     |||||| ||| ||||||| || ||| ||||||||||| || |||||||| ||| ||||  |||||||||||||||| |||||||||||||    
T  16516373 ttataatctttcaaattttgcacttt-ggtcctcaaattttacaaaatttccaaattga--ccccaataaatttataaaaaattgcaaatt 16516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 35470124 - 35470410
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||| ||||| ||||||||||||| ||||||| | |||| |||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  35470124 agtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagca 35470223  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||      
T  35470224 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattat 35470323  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  35470324 tgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 35470410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 414 - 675
Target Start/End: Original strand, 29091164 - 29091425
Alignment:
Q  414 tgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataa 511  Q
    |||| ||||||||| |||| |||||||||||||| |  || || ||||  ||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  29091164 tgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatga 29091263  T
Q  512 aatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcatttt 610  Q
    | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||| | || |||    
T  29091264 agtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattctgcaattt 29091363  T
Q  611 gggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
     ||||||||||  ||||||||||||||||||||  |||| | ||||||||| |||||||||||||    
T  29091364 -ggtcctcaaactttccaaaattttcaatttga--cccctagaaatttataaaaaattgcaaatt 29091425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 389 - 636
Target Start/End: Original strand, 2125859 - 2126108
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||| ||| ||||||| ||||||| | |||| |||||||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  2125859 agtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagca 2125958  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||     
T  2125959 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgt 2126058  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttc 636  Q
    | | |||||| | ||||| |||||| ||||||||||| |||||||||||||    
T  2126059 tgttatttttcatattttgcatttt-ggtcctcaaattttccaaaattttc 2126108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 435 - 640
Target Start/End: Original strand, 17727113 - 17727320
Alignment:
Q  435 gggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaat 531  Q
    ||||||||||||| |  ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||  || ||||| ||| |||||||||    
T  17727113 gggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaattatggaaatttacgaagtattttgttaaagttaaat 17727212  T
Q  532 ttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaa 631  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||| ||||||||    
T  17727213 ttagagaatttcaaatgacaactaaaagttaagaatttcaaaattcttcattgttataatttttcaaatttttcatttt-ggtcctcaaattttccaaaa 17727311  T
Q  632 ttttcaatt 640  Q
     ||||||||    
T  17727312 gtttcaatt 17727320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 462 - 675
Target Start/End: Complemental strand, 53760786 - 53760575
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  53760786 attgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacaccaaaaagt 53760687  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttat 660  Q
    |||||| ||||||||||||| ||| |||||||||| ||||||| |||||| |  |||||||| ||||||||||||||||||||  |||||||||||||||    
T  53760686 taagaaattcaaaattcttcattgttataatttttcaaattttgcatttt-gaccctcaaattttccaaaattttcaatttga--ccccaataaatttat 53760590  T
Q  661 acaaaattgcaaatt 675  Q
    | |||| | ||||||    
T  53760589 aaaaaaattcaaatt 53760575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 429 - 647
Target Start/End: Original strand, 56339175 - 56339395
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    |||| |||||||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| || ||||    
T  56339175 ttttgagggaattcaaatactttgatgtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtccaag 56339274  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgtt 625  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||| |||||| | | ||||||| ||    
T  56339275 ttaaatttaaagaatttcaaataacacctaaaagtgaagaatttcaaaattcttcattgttataatttttcaaattttgcatttt-gattctcaaatttt 56339373  T
Q  626 ccaaaattttcaatttgacccc 647  Q
    |||||| | |||||||||||||    
T  56339374 ccaaaaatgtcaatttgacccc 56339395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 456 - 647
Target Start/End: Complemental strand, 13318661 - 13318470
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||| |||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  13318661 aattttattgtttggataataatttgaagaattttcaaaatgatagaaacttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacct 13318562  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||  ||||||||| ||| |||||| ||| |||||||||| ||||||| |||||| ||||||||| | ||||||||||||||||||||||||    
T  13318561 aaaatctaagaatttgaaatttcttcattgttataatttttcaaattttgcatttt-ggtcctcaatttttccaaaattttcaatttgacccc 13318470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 389 - 646
Target Start/End: Original strand, 41139477 - 41139734
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||||||||  | ||||||  |||||||| |||| ||| |||||||||| |   |||| ||||  ||||||||||||||||||| ||| |    
T  41139477 agtgtgtttggatggggaa--gctttgaggtaatgtaatgttttgaggaaattcaaatacttttaggtgaattctattgtttggataataatttaaagaa 41139574  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    |||| ||||||||| |||||||| || ||||| ||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||     
T  41139575 tttttaaaatgatgaaaatttatgaagtattttgtttaagctaaatttagagaatttcaaatggcacctaaaagttaagaatttcaaacttcttatttgt 41139674  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccc 646  Q
    |||| ||||| ||||||| |||||| ||||||||||| ||||||||||||||| |||||||    
T  41139675 tatagtttttcaaattttgcatttt-ggtcctcaaattttccaaaattttcaaattgaccc 41139734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 456 - 644
Target Start/End: Complemental strand, 52295047 - 52294859
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatt-tgttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||||||| || |||| |||||||||||||| ||||||||||||||||||||||    
T  52295047 aatttcattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattgtgttcaagttaaatgtagagaatttcaaatgacacct 52294948  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgac 644  Q
    ||||| |||||| ||||||||||||| ||| |||||| ||| ||||||| |||||| | ||||||| | || ||||||||||||||||||    
T  52294947 aaaaggtaagaacttcaaaattcttcattgttataatctttcaaattttgcatttt-gatcctcaattttttcaaaattttcaatttgac 52294859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 456 - 647
Target Start/End: Complemental strand, 42776245 - 42776054
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||| ||| ||||||||||||||||||||||||||||||||    
T  42776245 aattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattttgtttaagttaaatttagagaatttcaaatgacacct 42776146  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||| ||||||||| ||| |||||| ||| | | |||||| | ||||| |||||| ||||||||||| |||||||| |||||| ||||||||    
T  42776145 aaaagctaagaattttaaatttcttcattgttgttattttttatattttgcatttt-ggtcctcaaattttccaaaaatttcaaattgacccc 42776054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 456 - 610
Target Start/End: Original strand, 4490098 - 4490253
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||| |||| |    
T  4490098 aattttattgtttggataataatttaaagaattttcaaaatgatggaaatttatgatgtattttgttcaagttaaatttagagaatttcaaattacacat 4490197  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcatttt 610  Q
    |||||||||||||||||||||||||| ||| | || ||||| ||||||||||||||    
T  4490198 aaaagttaagaatttcaaaattcttcattgttctattttttcaaatttttcatttt 4490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 456 - 647
Target Start/End: Complemental strand, 46243099 - 46242908
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||||||||||  || |||||  ||||||||||||||||||||||| |||||||| ||    
T  46243099 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttaagaagtattttattcaagttaaatttagagaatttaaaatgacatct 46243000  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||| ||| |||||||||||||||| ||| |||| ||||| || |||| |||||| | |||  |||| ||||||||||||||||||||||||    
T  46242999 aaaagctaataatttcaaaattcttcattgttatattttttcaatttttgcatttt-gatccctaaattttccaaaattttcaatttgacccc 46242908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 456 - 647
Target Start/End: Original strand, 47108351 - 47108542
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||||||| ||||| ||||||||| ||||| |||| |||| |||||||| || ||||| |||||||||||||||| |||||||||||||||||||    
T  47108351 aatttcattgtttagataacaatttgaagaatttttaaaacgatgaaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacct 47108450  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    ||||||||||||||||||||| ||||  || | || ||||| ||||||| |||||| ||||| ||||| | ||||||||| ||||||||||||    
T  47108451 aaaagttaagaatttcaaaatccttcactgttctattttttcaaattttgcatttt-ggtccccaaatttcccaaaatttacaatttgacccc 47108542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 386 - 631
Target Start/End: Complemental strand, 19461810 - 19461568
Alignment:
Q  386 aatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaa 483  Q
    |||||||| ||||||||||||||| ||||||   |||||||| |||| || |||||||||||||  ||  ||||||  ||||||||||||||||| || |    
T  19461810 aatagtgtttttggatggggaaatattttgaagtaatgtaatgttttgagcgaattcaaataatttgatataaattctattgtttggataataatatgga 19461711  T
Q  484 ggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgtt 583  Q
    | ||||| | |||||||||||||||| || ||||    |||||| ||||| || |||||||||||||||||||||||||||||||||||| |||||| ||    
T  19461710 gaatttttagaatgatggaaatttatgaattatt----caagttcaattttgataatttcaaatgacacctaaaagttaagaatttcaaatttcttcatt 19461615  T
Q  584 gctataatttttaaaatttttcattttgggtcctcaaatgttccaaaa 631  Q
      |||||||||| ||||||  |||||| ||||||||||  ||||||||    
T  19461614 cttataatttttcaaatttggcatttt-ggtcctcaaaacttccaaaa 19461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 466 - 603
Target Start/End: Original strand, 24705432 - 24705570
Alignment:
Q  466 tttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaag 564  Q
    |||| |||||||||||||| ||||| |||||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  24705432 tttgaataataatttgaagaatttttaaaatgatagaaatttatgaaatattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagttaag 24705531  T
Q  565 aatttcaaaattcttcgttgctataatttttaaaatttt 603  Q
    |||||||||||||||| ||  ||||| |||| |||||||    
T  24705532 aatttcaaaattcttcattcttataaattttcaaatttt 24705570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 462 - 675
Target Start/End: Original strand, 54566252 - 54566462
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    |||||||| |||||||||||||   |||| |||||||| ||||||||| || ||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  54566252 attgtttgaataataatttgaaatttttttaaaatgatcgaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctgaaagt 54566351  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttat 660  Q
    |||||||||||||||||||| ||| ||||| |||  ||||||| || ||| | || |||||| ||| |||| ||| |||||||  |||| ||||||||||    
T  54566352 taagaatttcaaaattcttcattgttataaatttacaaattttgcaattt-gatcatcaaattttctaaaa-tttaaatttga--cccctataaatttat 54566447  T
Q  661 acaaaattgcaaatt 675  Q
    | |||||||||||||    
T  54566448 aaaaaattgcaaatt 54566462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 449 - 571
Target Start/End: Complemental strand, 40338261 - 40338138
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    |||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||| || || ||| ||||||||||||||||| ||||||||||    
T  40338261 tgaggtgaatttcattgtttggataataatttacagaattttcaaaatgatggaaatttatgaagtattttattcaagttaaatttagaaaatttcaaat 40338162  T
Q  548 gacacctaaaagttaagaatttca 571  Q
    ||||||||||||||||| ||||||    
T  40338161 gacacctaaaagttaagtatttca 40338138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 466 - 622
Target Start/End: Original strand, 10354423 - 10354579
Alignment:
Q  466 tttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaag 564  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| || ||||| |||||||  |||| ||||||||||||||||||||||||||  ||||    
T  10354423 tttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagacaaatatagagaatttcaaatgacacctaaaacctaag 10354522  T
Q  565 aatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||| |||||| ||| ||||| ||||  |||||| || ||| |||||||||||    
T  10354523 aatttcaaatttcttcattgttataaatttttgaattttgcagttt-ggtcctcaaat 10354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 419 - 612
Target Start/End: Original strand, 26534525 - 26534721
Alignment:
Q  419 gaatgtaatattttaagggaattcaaataatgag--gtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatat 516  Q
    ||||||||| |||| |||||||||||||| |  |  || ||||  ||||||||||||||||||| ||| |||||||||||||| |||||| || || |||    
T  26534525 gaatgtaatgttttgagggaattcaaatactttgttgtgaattctattgtttggataataatttcaagaattttcaaaatgatagaaattcatgaagtat 26534624  T
Q  517 tt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgg 612  Q
    || ||| |||| ||||||||| ||||| |||||||||||||||| ||||||||||||||   || |||| |||||||||| ||||||| ||||||||    
T  26534625 tttgtttaagtcaaatttagaaaatttgaaatgacacctaaaagctaagaatttcaaaaaattttgttgttataatttttcaaattttgcattttgg 26534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 429 - 580
Target Start/End: Complemental strand, 27284693 - 27284539
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaag 525  Q
    ||||||| ||||||||||| |  ||||| |||||||||||||| ||||| |||||||  ||||| |||||||||||||||||| || ||||| |||||||    
T  27284693 ttttaagagaattcaaatactttgaggtgaatttcattgtttgtataatgatttgaataatttttaaaatgatggaaatttatgaagtattttgttcaag 27284594  T
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttc 580  Q
    |||||||||||||||||||||||| |  ||||||  |||||||||||| ||||||    
T  27284593 ttaaatttagagaatttcaaatgatatttaaaagccaagaatttcaaatttcttc 27284539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 462 - 634
Target Start/End: Complemental strand, 29686072 - 29685900
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||| ||| ||||||||||   |||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||| ||||||||||||||||    
T  29686072 attgtttagatgataatttgaatttttttcaaaatgatggaaatttataaagtattttgttcatgttgaatttagagaatttctaatgacacctaaaagt 29685973  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttt-tcattttgggtcctcaaatgttccaaaattt 634  Q
    ||||||||||||| || |   || |||||| |||| ||||||| ||||||   |||||||||| |||||||||||    
T  29685972 taagaatttcaaatttatctattcctataaattttcaaattttgtcattt--agtcctcaaattttccaaaattt 29685900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 449 - 638
Target Start/End: Complemental strand, 46242553 - 46242378
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    |||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||    
T  46242553 tgaggtgaattccattgtttggagaataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttatagaatttcaaat 46242454  T
Q  548 gacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
    ||||||              ||||||||||||| ||| |||||||||| |||||||  ||||| ||||||||||  |||||||||||||||    
T  46242453 gacacc--------------ttcaaaattcttcattgttataatttttcaaattttgtatttt-ggtcctcaaagtttccaaaattttcaa 46242378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 456 - 547
Target Start/End: Complemental strand, 40548220 - 40548128
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaat 547  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  40548220 aattccattgtttggataataatttgaagcattttcaaaatgatggaaatttaggaaatattttgttcaagttaaatttagagaatttcaaat 40548128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 389 - 557
Target Start/End: Original strand, 42776639 - 42776810
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||||   |||||||| ||   ||||||| |||| ||  |||||||||| |   |||| ||||||||||||||||| ||||||||||| |    
T  42776639 agtgtgtttggatggaagaatgtttttaggttatgtaatgttttgagtaaattcaaatacttttaggtgaatttcattgtttggatgataatttgaagaa 42776738  T
Q  487 ttttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaatgacacctaaa 557  Q
    ||||||||||||||||||||||| || || ||||||||| ||||||||||| ||||||||||||||| ||||    
T  42776739 ttttcaaaatgatggaaatttatgaagtattttgttcaaattaaatttagataatttcaaatgacacataaa 42776810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 393 - 612
Target Start/End: Original strand, 31947596 - 31947818
Alignment:
Q  393 tgtttggatggggaaatgttttgagagaat---gtaatattttaagggaattcaaataatgaggtaaatttcattgtttggataataatttgaaggattt 489  Q
    ||||||||||||  ||||||||||| ||||   ||||| ||   |||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  31947596 tgtttggatgggagaatgttttgagggaatattgtaatgttacgagggaattcaaatactgaggtgaattccattgtttggataataatttgaagaattt 31947695  T
Q  490 tcaaaatgatggaaatttataaaata---tttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgct 586  Q
    |||||||||| ||||||||  || ||   ||| || |||  |||||||    ||||||||| ||||||||||  |||||||||||||||||||| ||  |    
T  31947696 tcaaaatgatagaaatttacgaagtattttttttttaagaaaaattta---tatttcaaataacacctaaaatataagaatttcaaaattcttcattatt 31947792  T
Q  587 ataatttttaaaatttttcattttgg 612  Q
    ||||| ||| ||||||| ||||||||    
T  31947793 ataatctttcaaattttgcattttgg 31947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 429 - 556
Target Start/End: Original strand, 42775647 - 42775780
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt----gttc 522  Q
    |||| |||||||||||||| |  ||||| |||| |||||||||||||||||||| ||  ||||||||||| |||||||||||| || |||||    ||||    
T  42775647 ttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaataattttcaaaataatggaaatttatgaagtatttttttgttc 42775746  T
Q  523 aagttaaatttagagaatttcaaatgacacctaa 556  Q
    ||||||||||||||||||||||||||||||||||    
T  42775747 aagttaaatttagagaatttcaaatgacacctaa 42775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 1539649 - 1539754
Alignment:
Q  395 tttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttca 492  Q
    ||||||||| | ||||||||||| ||||||||| |||| |||||||||||||| |  ||||| |||||||||||||||||||||||||| || |||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgtagaattttca 1539748  T
Q  493 aaatga 498  Q
    ||||||    
T  1539749 aaatga 1539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 462 - 637
Target Start/End: Original strand, 30303172 - 30303347
Alignment:
Q  462 attgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagt 560  Q
    ||||||| ||| ||||| ||||| ||||||||||| | | |||||||| || ||||| | |||||||||||||||| ||||||||||||  | |||||||    
T  30303172 attgtttagatgataatatgaagaattttcaaaataaagtaaatttatgaactattttgatcaagttaaatttagaaaatttcaaatgaggcataaaagt 30303271  T
Q  561 taagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttca 637  Q
    ||| | ||||||| |||||| ||  ||| |||||| ||||||| |||||| |||||| | || ||||||||||||||    
T  30303272 taaaattttcaaatttcttcattcttattatttttcaaattttacatttt-ggtccttacattttccaaaattttca 30303347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 611
Target Start/End: Complemental strand, 56118639 - 56118476
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttc-aagttaaatttagagaatttcaaa 546  Q
    |||||| |||||||||||||| |||||||||||||  |||||||||||  |||||||||||||| || ||||||| |||||||||||| | ||||||| |    
T  56118639 tgaggtgaatttcattgtttgaataataatttgaataattttcaaaatagtggaaatttataaagtattttgttctaagttaaatttaaaaaatttcaga 56118540  T
Q  547 tgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttg 611  Q
    |||||| ||||   ||||||||||||| |||| |  ||||||||||| | | ||||| |||||||    
T  56118539 tgacacataaatactaagaatttcaaatttctac-atgctataatttctcatattttgcattttg 56118476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 389 - 595
Target Start/End: Original strand, 52493928 - 52494134
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatg--aggtaaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||||||| ||||||||   |||||||| ||| | ||||||| ||||| |   |||| |||||| |||||||||| |||||||  || |    
T  52493928 agtgtgtttggatggggaa-tgttttgaagtaatgtaatgtttga-gggaattaaaatatttttaggtgaatttcgttgtttggatgataattttgagaa 52494025  T
Q  487 ttttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    |||| |||| |||||||||| || || |||||  |||||||||||||||||||||||||||||||||||||||  ||| || ||||||  ||||| ||      
T  52494026 tttttaaaaggatggaaatt-atgaagtattttcttcaagttaaatttagagaatttcaaatgacacctaaaaactaaaaaattcaaatatcttcattct 52494124  T
Q  586 tataattttt 595  Q
    ||||||||||    
T  52494125 tataattttt 52494134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 13088692 - 13088588
Alignment:
Q  491 caaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctata 589  Q
    |||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||||||||||||| || |||||| ||| |||||| || ||| |    
T  13088692 caaaatgatgaaaatttatgaagtattttgttcaaattaaatttagagaatttcaaatgacacctaaaagataggaattttaaatttcttcattcctaca 13088593  T
Q  590 atttt 594  Q
    |||||    
T  13088592 atttt 13088588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 467 - 580
Target Start/End: Original strand, 24062853 - 24062967
Alignment:
Q  467 ttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaaga 565  Q
    |||||| |||||||  || |||||||||||||||||||||| | || ||||| || ||| |||||||||||||||||||||||||| ||||| | |||||    
T  24062853 ttggatgataattttgagaattttcaaaatgatggaaatttgtgaagtatttagtccaatttaaatttagagaatttcaaatgacatctaaacgctaaga 24062952  T
Q  566 atttcaaaattcttc 580  Q
    |||| ||| ||||||    
T  24062953 attttaaatttcttc 24062967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 4896795 - 4896734
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||||    
T  4896795 tctaatagtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaa 4896734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 390 - 472
Target Start/End: Original strand, 10633035 - 10633119
Alignment:
Q  390 gtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    |||||||||||||||| ||||||||||| ||||||||| || | ||||||||||||||   |||||| |||||||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 10633119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 7352974 - 7352914
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  7352974 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaa 7352914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 857396 - 857341
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  857396 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaa 857341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 454 - 574
Target Start/End: Original strand, 30303790 - 30303912
Alignment:
Q  454 taaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttgttc-aagttaaatttagagaatttcaaatgacac 552  Q
    ||||||| | ||||||||| ||  ||||||| ||||||||||| ||| |||||||| || |||||  || || |||||||||||||||||||||| ||||    
T  30303790 taaattttagtgtttggatgattttttgaagaattttcaaaataatgaaaatttatgaagtattttatccaacttaaatttagagaatttcaaataacac 30303889  T
Q  553 ct-aaaagttaagaatttcaaaa 574  Q
    || |||||||| ||||| |||||    
T  30303890 ctaaaaagttaggaattccaaaa 30303912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 31473851 - 31473936
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata--atgaggtaaatttcattgtttggat 472  Q
    ||||||||||||||||| ||||||||||| ||||||||| || | ||||||||||||||   |||||| ||||| |||||||||||    
T  31473851 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattttattgtttggat 31473936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 36104879 - 36104989
Alignment:
Q  451 aggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatga 549  Q
    ||||||||||  |||||||||| || |||||||| ||||| |||||| |  ||||||   |||||||| |||||||||| |||||| |||||||||||||    
T  36104879 aggtaaattttgttgtttggatgattatttgaagaatttttaaaatggtaaaaattttataaatattttgttcaagttatatttagtgaatttcaaatga 36104978  T
Q  550 cacctaaaagt 560  Q
    || ||||||||    
T  36104979 catctaaaagt 36104989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 569
Target Start/End: Complemental strand, 18922579 - 18922460
Alignment:
Q  451 aggtaaatttcattgtttggataataatttga-aggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatg 548  Q
    ||||||||||||||||||| || ||  ||||| || |||||||| |||||  |||||||  |||||||| || |||||||||||||||||||||||||||    
T  18922579 aggtaaatttcattgtttgaattatt-tttgagagaattttcaatatgatttaaatttacgaaatattttgtccaagttaaatttagagaatttcaaatg 18922481  T
Q  549 acacctaaaagttaagaattt 569  Q
    | | ||||||| || ||||||    
T  18922480 atatctaaaagctatgaattt 18922460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 454 - 580
Target Start/End: Complemental strand, 9451136 - 9451009
Alignment:
Q  454 taaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacac 552  Q
    ||||||| ||||||||||| || |||||||   |||| ||||||||  | |||||| || |||||  |||||||||||||| |||||| |||||||  |     
T  9451136 taaattttattgtttggatgatgatttgaatttttttaaaaatgattaacatttatgaagtattttattcaagttaaatttcgagaatatcaaatggtat 9451037  T
Q  553 ctaaaagttaagaatttcaaaattcttc 580  Q
    |||||||||||||| |||||| ||||||    
T  9451036 ctaaaagttaagaaattcaaatttcttc 9451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 10128131 - 10128076
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  10128131 agtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaa 10128076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 28846028 - 28845973
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||||||||| |||| |||| |||| |||||||||||    
T  28846028 agtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaa 28845973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 49111469 - 49111414
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  49111469 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 49111414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 36456089 - 36456028
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| ||||||||||||||| | ||||||||||| |||||||||||||| ||| |||||||    
T  36456089 tctaagagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaa 36456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 622
Target Start/End: Original strand, 17727560 - 17727627
Alignment:
Q  554 taaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||||||||||||||||| ||| ||  |||||||||| ||||||| |||||| |||||||||||    
T  17727560 taaaagttaagaatttcaaaatttttcattcttataatttttcaaattttgcatttt-ggtcctcaaat 17727627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 1112595 - 1112662
Alignment:
Q  377 aaaaattctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||| |||| ||||||||||||||||| |||||||||||  |||||||| |||  |||||||||||    
T  1112595 aaaaatcctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaa 1112662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 4441339 - 4441394
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||    
T  4441339 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattcaa 4441394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 7352814 - 7352869
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| | |||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaa 7352869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 15660340 - 15660285
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||    
T  15660340 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaa 15660285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 36455909 - 36455964
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||| |||||||||||    
T  36455909 agtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaa 36455964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 5715746 - 5715804
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaata 447  Q
    |||||||||||||| || |||||||||||| |||||||| |||| ||| ||||||||||    
T  5715746 agtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaata 5715804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 556 - 622
Target Start/End: Original strand, 42776264 - 42776329
Alignment:
Q  556 aaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaat 622  Q
    ||||||||||||||||||||||||| ||| ||||  |||| ||||||| |||||| |||||||||||    
T  42776264 aaagttaagaatttcaaaattcttcattgttatatattttcaaattttgcatttt-ggtcctcaaat 42776329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 547
Target Start/End: Original strand, 17727014 - 17727091
Alignment:
Q  471 ataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaat 547  Q
    |||||||| | ||| ||||| ||||||||| |||||||| |||||||| |||||| || |||||||||||||| ||||    
T  17727014 ataataatataaagaatttttaaaatgatgaaaatttatgaaatattttgttcaaattgaatttagagaattttaaat 17727091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 675
Target Start/End: Complemental strand, 40548139 - 40548031
Alignment:
Q  563 agaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatac 662  Q
    ||||||||||| |||||| ||| | | |||||| | ||||| |||||||| ||||||||| |||||||| |||||| ||||  ||||||||||||| |      
T  40548139 agaatttcaaatttcttcattgttgttattttttatattttgcattttgg-tcctcaaattttccaaaaatttcaaattga--ccccaataaattt-tca 40548044  T
Q  663 aaaattgcaaatt 675  Q
    |||||||||||||    
T  40548043 aaaattgcaaatt 40548031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 42844702 - 42844645
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||| |||||| ||||    
T  42844702 atagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaa 42844645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 14982282 - 14982334
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaatt 441  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||| ||||||||    
T  14982282 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatt 14982334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 4896650 - 4896705
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||| ||| |||||||  |||||||| |||| |||||||||||    
T  4896650 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaa 4896705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 11348394 - 11348339
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| ||||||||||| |||||||| || ||||||||| |||| |||||||||||    
T  11348394 agtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaa 11348339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 42844545 - 42844600
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||| | ||||||| ||||||||||| |||||||||||||| | |||||||||    
T  42844545 agtgtgtatagatgggggaatgttttgagggaatgtaatattttgaaggaattcaa 42844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 15660174 - 15660240
Alignment:
Q  378 aaaattctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||| ||||| ||||||||||||| ||| ||| |||||||  |||||||| |||| |||||||||||    
T  15660174 aaaactctaagagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaa 15660240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 572
Target Start/End: Complemental strand, 33915548 - 33915502
Alignment:
Q  526 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaa 572  Q
    |||||||||||||||||||||||||| ||||||| ||  ||||||||    
T  33915548 ttaaatttagagaatttcaaatgacatctaaaaggtagaaatttcaa 33915502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 46243148 - 46243115
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaat 422  Q
    ||||||||||||||||| ||||||||||||||||    
T  46243148 agtgtgtttggatgggggaatgttttgagagaat 46243115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 49136860 - 49136921
Alignment:
Q  486 attttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaa 546  Q
    ||||| |||| |||| |||||||||||||| |||||| ||||||| |||||| |||||||||    
T  49136860 atttttaaaaagatgaaaatttataaaatattttgtttaagttaagtttagaaaatttcaaa 49136921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 26250906 - 26250966
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||| || ||| |||||||  |||||||| |||| ||| |||||||    
T  26250906 ctaatagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaa 26250966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 28845876 - 28845928
Alignment:
Q  392 gtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||||| | ||||||||||| ||||||||| |||  |||||||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaa 28845928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 42543025 - 42542981
Alignment:
Q  388 tagtgtgtttggatggggaaatgttttgagagaatgtaatatttt 432  Q
    |||||||||||||||| | ||||||||||| ||||||||| ||||    
T  42543025 tagtgtgtttggatggtggaatgttttgagggaatgtaatgtttt 42542981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 132; Significance: 3e-68; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 4569 - 4283
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| || ||||||||||| |||| |||| |||| ||| |||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  4569 agtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagca 4470  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||     
T  4469 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttcattgt 4370  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| ||||||  |||||||| | |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  4369 tgttatttttcatattttgcatttt-agtcctcaatttttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 4283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 132; Significance: 3e-68; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 389 - 675
Target Start/End: Complemental strand, 5213 - 4927
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaagga 486  Q
    |||||||||||||| || ||||||||||| |||| |||| |||| ||| |||||||||| |  | ||| |||| |||||||||||||||||||||||| |    
T  5213 agtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagca 5114  T
Q  487 ttttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||     
T  5113 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttcattgt 5014  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| ||||||  |||||||| | |||||||| |||||| ||||  |||||||||||||  | |||||||||||||    
T  5013 tgttatttttcatattttgcatttt-agtcctcaatttttccaaaaatttcaaattga--ccccaataaatttccaaaaaattgcaaatt 4927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 120; Significance: 5e-61; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 389 - 647
Target Start/End: Complemental strand, 15934 - 15677
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatgaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    ||||||||||||||||| | ||||||| | |||||||||  | | || ||||||||||| | |||| |||| |||||||||||||||||||||||| |||    
T  15934 agtgtgtttggatgggggattgttttggg-gaatgtaatgctatgagagaattcaaatacttaggtgaattccattgtttggataataatttgaagaatt 15836  T
Q  489 ttcaaaatgatggaaatttataaaatat-ttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgcta 587  Q
    ||||||||||||| ||||||| || ||| ||||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||||| |||  |    
T  15835 ttcaaaatgatgggaatttatgaagtatattgttcaagttaaatttagagaacttcaaatgacaccaaataggtaagaatttcaaaattcttcattgtca 15736  T
Q  588 taatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    |||| ||| |||||||||||||| | ||||||| | || |||||||||||||||||||||    
T  15735 taatcttttaaatttttcatttt-gatcctcaattttttcaaaattttcaatttgacccc 15677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 429 - 546
Target Start/End: Complemental strand, 16405 - 16285
Alignment:
Q  429 ttttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaag 525  Q
    |||||||| |||||||||| |  |||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| || ||||||||||    
T  16405 ttttaaggaaattcaaatattttgaggtaaattccattgtttggataatcatttgaagaatttttaaaatgatggaaatttataaagtattttgttcaag 16306  T
Q  526 ttaaatttagagaatttcaaa 546  Q
    |||||| ||||||||||||||    
T  16305 ttaaatgtagagaatttcaaa 16285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 119; Significance: 2e-60; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 384 - 603
Target Start/End: Original strand, 4072 - 4293
Alignment:
Q  384 ctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttg 481  Q
    |||| |||||||||||||   | ||||||||||||||||||||| |||| |||||||||||||| |  ||||| ||||  ||||||||||||||||||||    
T  4072 ctaagagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattctattgtttggataataatttg 4171  T
Q  482 aaggattttcaaaatgatggaaatttataaaatatttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcg 581  Q
    ||| |||||||||||||||||||||||| || |||||  | |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||     
T  4172 aagaattttcaaaatgatggaaatttatgaagtattttgttaagttaaaattagagaatttcaaatgacacctaaaacttaagaatttcaaaattcttca 4271  T
Q  582 ttgctataatttttaaaatttt 603  Q
    ||  |||||||||| |||||||    
T  4272 ttattataatttttcaaatttt 4293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 389 - 675
Target Start/End: Original strand, 7153 - 7439
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatgagg--taaatttcattgtttggataataatttgaagga 486  Q
    ||||||||||||||| | ||||||||||| ||||||| | ||||||||||||||||||| |  ||  | |||| |||||||||||||||||||||||| |    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaaatactttggagtgaattccattgtttggataataatttgaagca 7252  T
Q  487 ttttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgc 585  Q
    ||||||||||||||||||||||  || |||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||| | |||||| |||     
T  7253 ttttcaaaatgatggaaatttacgaagtattttattcaagttaaatttagagaatttcaaatgacacctaaaagccaagaatttcatatttcttcattgt 7352  T
Q  586 tataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    | | |||||| | ||||| |||||| ||||||||||| |||||||| || ||| ||||  |||||||| ||||  | |||||||||||||    
T  7353 tgttatttttcatattttgcatttt-ggtcctcaaattttccaaaaattccaaattga--ccccaatatattttcaaaaaattgcaaatt 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 389 - 647
Target Start/End: Complemental strand, 2976 - 2719
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaataatgaggtaaatttcattgtttggataataatttgaaggatt 488  Q
    ||||||||||||||||| | ||||||| | |||||||||  | | || ||||||||||| | |||| |||| |||||||||||||||||||||||| |||    
T  2976 agtgtgtttggatgggggattgttttggg-gaatgtaatgctatgagagaattcaaatacttaggtgaattccattgtttggataataatttgaagaatt 2878  T
Q  489 ttcaaaatgatggaaatttataaaatat-ttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgcta 587  Q
    ||||||||||||| ||||||| || ||| |||||||||||||||||||| || ||||||||||||| || || |||||||||||||||||||| |||  |    
T  2877 ttcaaaatgatgggaatttatgaagtatattgttcaagttaaatttagataacttcaaatgacaccaaataggtaagaatttcaaaattcttcattgtca 2778  T
Q  588 taatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaatttgacccc 647  Q
    |||| ||| |||||||||||||| | ||||||| | || |||||||||||||||||||||    
T  2777 taatcttttaaatttttcatttt-gatcctcaattttttcaaaattttcaatttgacccc 2719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 449 - 546
Target Start/End: Complemental strand, 9595 - 9497
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaatttagagaatttcaaa 546  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  9595 tgaggtaaattccattgtttggataatcatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaagttaaatgtagagaatttcaaa 9497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 103; Significance: 7e-51; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 420 - 638
Target Start/End: Complemental strand, 221236 - 221016
Alignment:
Q  420 aatgtaatattttaagggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatt 517  Q
    |||||||| ||||||||||||||||||| |  | ||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||| || ||||    
T  221236 aatgtaatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtatt 221137  T
Q  518 t-gttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcc 616  Q
    | |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |||||| ||| | | |||||| | ||||| |||||| |||||    
T  221136 ttgttcaagttaaatttagagaatttcaaatgacacttaaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcatttt-ggtcc 221038  T
Q  617 tcaaatgttccaaaattttcaa 638  Q
    |||| | |||||||| ||||||    
T  221037 tcaatttttccaaaaatttcaa 221016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 456 - 638
Target Start/End: Complemental strand, 223751 - 223569
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaagttaaatttagagaatttcaaatgacacct 554  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |    
T  223751 aatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacactt 223652  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattttcaa 638  Q
    ||||| ||||||||| ||| |||||| ||| | | |||||| | ||||| |||||| ||||||||| | |||||||| ||||||    
T  223651 aaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcatttt-ggtcctcaatttttccaaaaatttcaa 223569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 434 - 675
Target Start/End: Complemental strand, 50333 - 50101
Alignment:
Q  434 agggaattcaaataat--gaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaata-tttgttcaagttaaa 530  Q
    |||||||||||||| |  || || |||| ||||||||| ||||||||||||||  ||||||||||||||||||||||| || || |||||||||||||||    
T  50333 agggaattcaaatactttgatgtgaattccattgtttgaataataatttgaagagttttcaaaatgatggaaatttatgaagtactttgttcaagttaaa 50234  T
Q  531 tttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaa 630  Q
    |||| |||||||||||||||||||||||||||||||||||||| |  ||| ||| |||||||||| || ||||         | |||||||| |||||||    
T  50233 tttaaagaatttcaaatgacacctaaaagttaagaatttcaaattctttcattgttataattttttaattttt---------gccctcaaattttccaaa 50143  T
Q  631 attttcaatttgaccccccaataaatttatacaaaattgcaaatt 675  Q
    |||||||||||||  ||||||||| |||||| |||||||||||||    
T  50142 attttcaatttga--ccccaataagtttata-aaaattgcaaatt 50101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 456 - 603
Target Start/End: Original strand, 109102 - 109249
Alignment:
Q  456 aatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatatttg-ttcaagttaaatttagagaatttcaaatgacacct 554  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||||| |||||  ||||||||||||||||| |||||||||||||||||    
T  109102 aattccattgtttggataagaatttgaagaattttcaaaatgatg-aaatttataaagtattttattcaagttaaatttagataatttcaaatgacacct 109200  T
Q  555 aaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttt 603  Q
    ||||||||||||||| |||||||||| ||| |||||| ||| |||||||    
T  109201 aaaagttaagaattttaaaattcttcattgttataatctttcaaatttt 109249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 449 - 634
Target Start/End: Complemental strand, 11965 - 11779
Alignment:
Q  449 tgaggtaaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttataaaatattt-gttcaa-gttaaatttagagaatttcaaa 546  Q
    ||||||||||| |||||||||   |||||||||| | | ||| ||||||||| |||||||| || ||||| |||||| | ||||||||||||||||||||    
T  11965 tgaggtaaattccattgtttgttaaataatttgatgaaattttaaaatgatgaaaatttatgaagtattttgttcaaagataaatttagagaatttcaaa 11866  T
Q  547 tgacacctaaaagttaagaatttcaaaattcttcgttgctataatttttaaaatttttcattttgggtcctcaaatgttccaaaattt 634  Q
    || |||||||||| ||||||||||||| |||||| ||  |||||  ||| ||||||| |||||| |||| |||||| |||||||||||    
T  11865 tggcacctaaaagctaagaatttcaaatttcttcattattataacatttcaaattttgcatttt-ggtcttcaaattttccaaaattt 11779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 564 - 507
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  564 atagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 401 - 462
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| ||||||||||||||||| ||| ||||||| |||  |||| |||| |||||||||||    
T  401 tctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaa 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 2029 - 2086
Alignment:
Q  387 atagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  2029 atagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 2192 - 2131
Alignment:
Q  383 tctaatagtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||| ||||||||||||||||| ||| ||||||| |||  |||| |||| |||||||||||    
T  2192 tctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaa 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 82945 - 83000
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||| |||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaa 83000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 42135 - 42079
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaaa 445  Q
    ||||||||||||||||| || |||||||| ||||||||| |||| || |||||||||    
T  42135 agtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattcaaa 42079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 41999 - 42054
Alignment:
Q  389 agtgtgtttggatggggaaatgttttgagagaatgtaatattttaagggaattcaa 444  Q
    |||||||||| |||| | ||||||||||| ||||||||| |||| |||||||||||    
T  41999 agtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 42054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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